CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT635475	Ezakiella massiliensis strain Marseille-P2951T chromosome contig00001	3 crisprs	cas3,DEDDh,WYL,csa3,RT,cas8e,cse2gr11,cas5,cas6e	0	8	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LT635475_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT635475_1

546274-546364

Orphan

Consensus_repeat	Method
GCCAATTACTTTTTGTTTACTAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT635475_1

>merge|NZ_LT635475|1|546274-546364|CRISPRCasFinder
GCCAATTACTTTTTGTTTACTAAACTCGTTTCAACTTTATTTACTATTTATTTTTTATTTTCCATTGCCATTTACTTTTTGTTTACTAAAC

>NZ_LT635475|1|1|546274-546364|CRISPRCasFinder
GCCAATTACTTTTTGTTTACTAAAC	TCGTTTCAACTTTATTTACTATTTATTTTTTATTTTCCATT
GCCATTTACTTTTTGTTTACTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT635475.1\|WP_075573887.1\|538005_538458_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224766
NZ_LT635475.1\|WP_075573899.1\|550465_551365_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075573886.1\|537090_538005_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_LT635475.1\|WP_075573903.1\|553444_554944_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226650
NZ_LT635475.1\|WP_075573898.1\|549477_550464_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_LT635475.1\|WP_075573897.1\|548510_549488_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NZ_LT635475.1\|WP_075573901.1\|552198_552735_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|224104
NZ_LT635475.1\|WP_075574844.1\|547391_547838_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_LT635475.1\|WP_075573890.1\|540398_541397_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LT635475.1\|WP_075573885.1\|536488_537091_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_LT635475.1\|WP_075573893.1\|544206_545670_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273920
NZ_LT635475.1\|WP_075573895.1\|546441_547164_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075573900.1\|551428_552124_-\|phosphatidylserine-decarboxylase	unknown	unknown	gnl\|CDD\|179544
NZ_LT635475.1\|WP_075573889.1\|539656_540406_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_LT635475.1\|WP_075573892.1\|542976_544089_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_LT635475.1\|WP_075573891.1\|541393_542989_-\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_LT635475.1\|WP_075573894.1\|545669_546131_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
NZ_LT635475.1\|WP_075573896.1\|547893_548514_-\|YARHG-domain-containing-protein	unknown	unknown	gnl\|CDD\|372555
NZ_LT635475.1\|WP_099950349.1\|538595_539396_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238568
NZ_LT635475.1\|WP_075573902.1\|552749_553457_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350157

Protein	Function_ID	Function_description	E-value
NZ_LT635475.1\|WP_075573887.1\|538005_538458_-\|hypothetical-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	1.97857e-07
NZ_LT635475.1\|WP_075573900.1\|551428_552124_-\|phosphatidylserine-decarboxylase	gnl\|CDD\|179544	PRK03140, PRK03140, phosphatidylserine decarboxylase; Provisional.	1.39491e-48
NZ_LT635475.1\|WP_075573886.1\|537090_538005_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	0.00529445
NZ_LT635475.1\|WP_075573903.1\|553444_554944_+\|hypothetical-protein	gnl\|CDD\|226650	COG4187, RocB, Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism].	1.2527e-29
NZ_LT635475.1\|WP_075573898.1\|549477_550464_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	4.58129e-57
NZ_LT635475.1\|WP_075573897.1\|548510_549488_-\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	5.49876e-77
NZ_LT635475.1\|WP_075573901.1\|552198_552735_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	3.89049e-39
NZ_LT635475.1\|WP_075574844.1\|547391_547838_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.7837e-53
NZ_LT635475.1\|WP_075573890.1\|540398_541397_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	9.47558e-73
NZ_LT635475.1\|WP_075573885.1\|536488_537091_-\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	9.75991e-69
NZ_LT635475.1\|WP_075573893.1\|544206_545670_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273920	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_LT635475.1\|WP_075573889.1\|539656_540406_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	6.42946e-89
NZ_LT635475.1\|WP_075573892.1\|542976_544089_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	6.72097e-126
NZ_LT635475.1\|WP_075573891.1\|541393_542989_-\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_LT635475.1\|WP_075573894.1\|545669_546131_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	4.34885e-57
NZ_LT635475.1\|WP_075573896.1\|547893_548514_-\|YARHG-domain-containing-protein	gnl\|CDD\|372555	pfam13308, YARHG, YARHG domain. This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.	4.32035e-13
NZ_LT635475.1\|WP_099950349.1\|538595_539396_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238568	cd01148, TroA_a, Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	4.82077e-60
NZ_LT635475.1\|WP_075573902.1\|552749_553457_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|350157	cd09006, PNP_EcPNPI-like, purine nucleoside phosphorylases similar to Escherichia coli PNP-I (DeoD) and Trichomonas vaginalis PNP. Escherichia coli purine nucleoside phosphorylase (PNP)-I (or DeoD) accepts both 6-oxo and 6-amino purine nucleosides as substrates. Trichomonas vaginalis PNP has broad substrate specificity, having phosphorolytic catalytic activity with adenosine, inosine, and guanosine (with adenosine as the preferred substrate). This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	1.15332e-152

>NZ_LT635475.1|WP_075573894.1|545669_546131_+|PTS-glucose-transporter-subunit-IIA
MALFKKKIKLTSPMTGEIVDITDTSDPVFSGKMVGDGVTIIPTDGDILAPMAGKIIQMFDTGHALAIESNGIQVLIHIGLDTVELNGQGFTKIAHEGQEVKQGDLLIKVDLEKIKALGKSIESPMVIIEAAGKSLNKILGPAEKGQTVAIELK
>NZ_LT635475.1|WP_075573893.1|544206_545670_+|PTS-transporter-subunit-EIIC
MKYLQKLGRSLMQPVAVLPVAAILLGIGYAIDPSGWGNGSPVAAFLIKSGGAIIDNLPIIFAVGVAYGMSKDSNGAAALSGLVAFLVVTTLLSEGTITMLRSGQAPLDTEGFGKINNVFIGILSGVVASSVYDKFSGKKLPDALAFFSGRRMTPIITSFAMILVSAILYFVWPAIYSALVAFGKWMIGLGPWGAGIYGFFNRLLIPTGLHHALNSVFWFDIAGINDIHNFLGGAEKLASGEAIVGVTGMYQAGFFPIMMFGLPGAALAMIKTARPERKKAVKSIMMAGILATVVTGLTEPIEFSFMFLAPGLYLIHALLTGISLIIAAFLKATAGFGFSAGLIDYMLSLKNPVANKPWILLIMGVAAFFIYYFLFKFLIEKFNLKTPGREDEPNEKEGKTFDENTDFTQMAKTILAGIGGKENIDTLHYCITRLRFEVKDETKVNEKQITSSGISGIIRPSQKSVQVVVGPQVQFVYDEIMKIVGEI
>NZ_LT635475.1|WP_075573892.1|542976_544089_-|N-acetylglucosamine-6-phosphate-deacetylase
MKFCGASVFYKDKFQKIDFEIKNEKFKSFGNFPSEDSININGKYIIPGLTDIHTHGAMNADSCDGKIESINTFAKYMMENGITQFVPTTMTFSENILSGIFACLGAYDNSYAKLVGIHMEGPFIAESKIGAQNPKYISKANAEMTKRLDNLSGGLLKIISIAPETEGAMEFARELKDDYIISIAHTDCDYDTAIEAFDNGFSHLTHMFNAMNGIHHRAPGPIIAAYERAKYIELIADGVHVYPPVVRMVFDLMGDKIILVSDSMRATGLSDGVYDLGGQNVEVKGNTARLVDKGNIAGSVTNLFACMQTAIAMGVDRVKAVKAASVNPARALGLTDMGEIEEGYFANFLILDEDFNLEAVYIRGKERWKR
>NZ_LT635475.1|WP_075573891.1|541393_542989_-|phosphoenolpyruvate--protein-phosphotransferase
MEKINARGVSDGIAIGKIHVIDRKQNIDSNKSADTNLEHERLDAGLKKAAEALEQIKENIGGDEKEIFTAHQLMLEDPELIGTINSYIDQGFKAEYSVFQAKEDLKEIFYAMDDEYFRMRANDIEDVMTRLIKALQGEEAKTLDDDYILLADDLYPSETMEMDFKKIKGLATINGSVTSHTTILANNLKIPAVISLAIDDLKACDKKLAIIDGSQGIFILDPSDETIEEYREKINQNNLKAKDLSKYKNMEAITHSGQRISVYANIGSDEEAKDAYENGAEGIGLFRSEFLFLGKDQAPDEETQFEAYKNALEYMKGRPVTIRTLDIGADKQVDYLGLEKEDNPQMGLRAIRISLSQTDLFKIQLRALLRASVYGKLKILLPMIISTDEIIQTKKLIEECQSEFDMENKAYGDIELGIMIETPAACLIADELANECDFFSIGTNDLTSYTLAVDRTNAKLSGYLDSHHQAILRLIKMAALAAHENKIEVGICGAAGADLSLLDYFIEIGIDELSVPVGRVLDLKKEIINRQ
>NZ_LT635475.1|WP_075573890.1|540398_541397_-|iron-ABC-transporter-permease
MKKYSSLFFLFILMVAIFIAVFFGSVKVDFNDIIENIKNIFSDDYIDKTSIIIKQIRIPRVLLAALTGAILAGVGLLMQTITSNSLADSYVLGISSGASAGAVSTIVYGLFSTLGRFNVYIGAFVGAILSTILLVFLQGRNRNQIRLVLMGMGISGFFSAMTAIFIFNSKNEAQVRSATYWMMGSLTGANYKSLIYIFAALIILLVFVFIYHKELDLLFVGLDGAQNSGLEIRPFQLKVVIVSSMAIAVLVSEVGVIGFVGLIVPHIIKKISFFNHRRLFIDSILSGAAFVVICDIFARTLYAPRELPIGVVTGFVGAPIFIYMIKKGYKDA
>NZ_LT635475.1|WP_075573889.1|539656_540406_-|ABC-transporter-ATP-binding-protein
MPSLQIKNLNFDIDGIKILKNINLDLEGQKIYGIIGPNGSGKSTLLKAIYNSFKSRDMVTINGSLAKMFTNIEMARHIAFMNQINDSIENDLSVKELVIMGRYPYKKRFESYNSQDEEIVLKILQLIGIIDLACRPIKNLSGGERQRAILAKTLAQDTDIIMLDEPTNHIDVRYQVELMKILKSLKKLVIVSIHDISLAAKFCDELIVLNHGEILAKGEPRNVLTKDLLKEVYDIDFKILYEPEFIIYF
>NZ_LT635475.1|WP_099950349.1|538595_539396_-|ABC-transporter-substrate-binding-protein
MSQATTEMMLAVGLKDQMVGTAFLEEEIYESLKDDYEKVKVLSEKWPSLEVFMAENPDFTSGWPVPFTKRAIEAKNLIEKNVNIFIPESMKRTDANLETNFEDLLMYGKIFNHNKEAKAFVDAQREKLTKVQEGLKDLPEKRVFIYDSEDGDPFTVYEGYTTNVLKLIGAKNILADKGIDKTWDKASWEEIVKEDPEYIIVVDYGVSIRNTDDFDQKVQKMKDNPVTKDITAVKNNNFIRVKLSEITPGVRTVDALERLAKTIHAK
>NZ_LT635475.1|WP_075573887.1|538005_538458_-|hypothetical-protein
MNHIIDKYLEKDFLLFAVKKDGSINAMSCGWATEGILFNKHVFTVYVRRSRYTFEFLEEADDFYIGTTSAEMIDYFGSVSGRDEDKIAKAGFKTEIKDGILQVEGVSNLKRLKKIMAVDFKDYIMIDDEINKKYQEDSRGHVAFVGEVED
>NZ_LT635475.1|WP_075573886.1|537090_538005_-|S-layer-homology-domain-containing-protein
MKNTRKMAQVLAILLAAMMIIGVIIFAMPNVFAEDGGKTELTEEEKKKREEEDYWRAVEADRQYRVEQLQNQILNMIDQFKGKPGYYGAVQKLEKFLDSVNPRDILDPRDYEAAIAAFKKDDSELQSKPLLKGDEKNNFNPDNNLTRAEFAMVLARMDNQIFLGTGENWYQEAMNHAKTRGYLKGDDSGDMMPMKNISLAEVVTVFVRYKGFTKMEGNMSNVPENHWAKGEMQRAYMDGWISGIENISDCDRPITRGELASILTKVRQIKIDKQKMDEQIGLYKRFFDVNKGNRYYYDILVNTK
>NZ_LT635475.1|WP_075573885.1|536488_537091_-|dTMP-kinase
MGKFIVIEGPDGTGKSTVIEGLKRVYKDKNIKYFREPGGSEVGEKIRTILLKKDTQISSATEALLFAAMRSENYEMLKKDLENYDLIIADRFLMSSICYQGAGLELGVKDVEMVNDFALKGFRPDLNILLMLNADQGIDRKIQERELDRLELRGLDFHKRVVSEYQKFTNSQGVKVVDASRSKAEVLSDVVEIINGEMGW
>NZ_LT635475.1|WP_075573895.1|546441_547164_-|hypothetical-protein
MKKYLLIFLAGLMVFSLACKKANINEKANEPTSTEKNESAISTEEKTDKDNDKDILESVLPPMVKVKGIIYKNTGYQNAMVTCGTADGEIKTTVEATKEPANNDESNFGKGYEYQKWGDGYINVKIDNRWMLFKDIKLKDKEDEIPEWVAHFTGKVISVEEASLMVEATEIDDEFYFKKLFTKPIVLAIDNLRHEKDGVVSTEGLEGKFVEVYFGGEIEHTEPESSLPISIGDVYRIDVK
>NZ_LT635475.1|WP_075574844.1|547391_547838_-|nucleoside-deaminase
MKKAMTLAKKAGAQGEIPIAAIVARDGEIIASAKNAVRSKNDPTAHAEVLAIKKACKKLNNYRLPDCTLYTTLEPCVMCTGAIIEARLNRLVIAALDDRRGAVKSNLELIDSACSNHKMQVEAGLMQEEASQMLTDFFSQLRDLRKNK
>NZ_LT635475.1|WP_075573896.1|547893_548514_-|YARHG-domain-containing-protein
MRLSPIPPPYYTTDSKRRPINKWLIIFIIGILLAAGALYYLLSRDPISKDTAKEEESILKDASEIDQAGKKEEEIKIQTVDSKDQEENSYEDTSEDEIKEYNLPSAYLKNTDSELLTEAFLKDTEIGQIKLIRDEIYARHGFVFKDRETQKYFEEKTWYVKNPNYTDELLNDVEKKNLDLIGKFLKDDNKKDEEQEENKDTEEGEK
>NZ_LT635475.1|WP_075573897.1|548510_549488_-|type-2-isopentenyl-diphosphate-Delta-isomerase
MLSRKNTHLYYSLRLDRRGDFKNYRIKTIEPCDLSYDDLDLSVEFLGRTLEFPNYINAMTGGTELAKKINKRLVIMAKYLKAPIMTGSLNPYIKENNFLGFEPFLDYDFVIANLSARNSLDDLKKVSDKLNTPYVSMHLNTMQECFQFDGDTSFKNERKNIEEAAKYFGKNLIVKAVGQGFSKESIRILKELGVQNLDISGAGGTDFSKIEIARNMAISKYELADDFADIYYPQVPTSESILNSKDSGLFVIASGGIDRARDIFMSFALGAQMTASSYYYLKLAQESFENARYKMDSRIENFRKYMLVSSSRTIEDIKGKYEVIK
>NZ_LT635475.1|WP_075573898.1|549477_550464_-|LCP-family-protein
MKKFKQAFTLAFVVFLAFYLFAIVKGAKNPYENLFSKDKSKGETNIVDENKGDDDNNKGNEEEPEPEPEPEQMIDDEFMFVMFGTDSHDIDVSKGYRSDTIILTKVNFKTGEVRMVNIPRDTRVNIPGHGLTKINAAHSFGGPNLLLKTIQDNFGINVDYYVKVDYTLVENFVDAIGGVDYNVPYDLIYTDPADKPPLVINIKAGMQHIDGKDAVKVLRYRGNTSDIDRINRQQEFLKVVMDQALSLKNIGRLPKIFSSIKSNLRTNFGEKQILEAIVSLPKVDMNNLEMSMIPGEGKYVGDKSFWIYYENNTKDLLKENFGDYMNAQ
>NZ_LT635475.1|WP_075573899.1|550465_551365_-|hypothetical-protein
MKKRKIAKILLAAMLITGCNRAVQKPQEPVTPIVERDEAVKELPYDPISLIDYINKNIDKVDNNKKELYILTLEDTLVANLNIVSGVVNSDECKGELSFVKDGEALSESDIEKIEDSSIKNEIQKIYDMYYTVFKSGDSFVPGLDYEKILKLVDKDNKALADYYSIKLEENQKPTLFKGQVMLSPQDLLARINEIEKFVIDNKDFPRNMDFVARYQSWLYVLLTGTASSPLVDKDGKLMKEFEDLEKNLEAKTIADQTFLDGMYYIHRNNNKFDDELMDEIRTLVKQSVYELKDRAEMN
>NZ_LT635475.1|WP_075573900.1|551428_552124_-|phosphatidylserine-decarboxylase
MKLLVRFCNLKIINKIFYFLVNTRFSKIFIPAFRRHYKINSQEILQGQKFKSLNDYFARAIDMDYRPMGEGKYISPCDGVITAGGNISHGMTFDVKGKMVDVKTLLNKEAHVKAFQVIYLSPHNYHRFHAIDDNEVIDKYELGDKSIPVNDLGFEMGNPFLDNYRVILETKNYFYIAIGATNVNSVKFFKDKFKRGETIGEFRFGSTIVILYKEEIEGLKLGEIKVREDLI
>NZ_LT635475.1|WP_075573901.1|552198_552735_+|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MKNKKFFHDNAANFVTFCNMLAGAISIIMSLNGKFRTAMAFIIIASIADRYDGKVARRLNTDSELGVQMDSMGDVISFGVAPAILVYTFRIMPLEGNIRIIGGISTMIYICAGAFRLARFNVDGMDEDNSFSGMPIPIAGLIIVAMLMFGHKIGIIPIIIAEFILALFMVSKIKIKKK
>NZ_LT635475.1|WP_075573902.1|552749_553457_+|purine-nucleoside-phosphorylase
MSTPHNEAKKGDIKKTVLMPGDPLRAKHIAETFLEDVKQFNSVRNMLGFSGTYKGHEFSVMGSGMGIPSFAIYAHELYTMYDVEKIVRVGSCGAYQKDLDLFDVIIAQGASSDSNFAHQFNLPGNLAALADFDSLEKAVQAAREMNKKVHVGNIFSSDIFYNADSDEWKKWEKMGVLGVEMESYALYLIAQYLNKKALGIFTVSDSFHKSEITTPEERQKSFNDMIEIALESCLK
>NZ_LT635475.1|WP_075573903.1|553444_554944_+|hypothetical-protein
MLEVKKIFEELLNIDALTYDRGEVDIAKALYNIYLGLDYFKDHPENVKLLATDEDEFVRFNQMAMVQKGDNKDVVLIINTIDEPQLTGKYSKSDVKIIKSTLASNVVVLDELSKTDFDGNVMILNICDRYGNNKGMESAVKYIMSMKEEGYNFKAAITTHSFLTNGEEAIFFGAQAIIKPAIFVAGKTVRTLLFDEGLDPSYMLSTFARDLTLNSVLMDNYQNEVSEPIYVNRFIVPGGTEVQSSAWGYTSFMTSTVSQDLKAYMNNLKNLVINSYNKAIAELNTKYASYCLKRNIPFSPLKIRPKVYTWDEYLNEIITVRGNSVLSSLRNDVEDKINRSPDLPLSELRLQLVKNVYDKHKLADEPIIIIYFEEAPSQRVDITGTNTLQRDLMLSFTSAINTVKPTIKRRFFYPDMSYHSYLNLSEDYRDLKESLKFIPMARPEEYHRINNAAKLSIPTVNVGGINKIQDGKFTFDEKYHFETYPALMIEGIKRLFKCN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT635475_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT635475_2

1340669-1341492

TypeI-E

Consensus_repeat	Method
GTAATTCCCGCGCACGCGGGGGTGATCCC	CRISPRCasFinder
GTAATTCCCGCNCACGCGGGGGTGATCC	CRT
GTAATTCCCGCGCACGCGGGGGTGATCCC	PILER-CR

13 spacers

cas6e,cas5,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_LT635475_2

>merge|NZ_LT635475|2|1340669-1341492|CRISPRCasFinder,CRT,PILER-CR
AAAATTTCCGCACACGCGGGGGTGATCCCGACGAACAGGACGAGAACACGGAGCTGGCCAAGCAATTCCCGCGCACGCGGGGGTGATTTTAGCTCTTGCCTGGTCGCCCATACAAGGCTGTCGTAATTCCCGCACACGCGGTGGTGATCCTGAAGATGAAAATGGGTTCTTGAACTATTGTATGTACTTCCCGCATTCGCGGGGGTGATCCTGTCAGTAAATGTCAGTAAATATTGTGGTATAAGTAATTCCCGCACACGCGGTGGTGATCCTATGAGCGACGAACACTTTGCAGGCAATGTATCGTAATTCCCGCACACGCGGGGGTGATCCCTATGTAGAATTTCAAGCCAATGTGTTTGCGGAAAGTAATTCCCGCGCACGCGGGGGTGATCCCACAATTGAGTACGCAAAATTAATGCAAAAGAAGCAATTCCCGCGCACGCGGGGGTGATCCCAGAAATAGTGGTTGAGCGTAAGTCGAGCAAAAGTAATTCCCGCGCACGCGGGGGTGATCCCGAGCTTTAAATCAAAGGAGGAAATTATGAAACGTAATTCCCGCGCACGCGGGGGTGATCCCCTAGCCAATAGTTCTTTAATTCCACCAATTCCCGTAATTCCCGCGCACGCGGGGGTGATCCCTTGGTCGACTGTTGAGTTCTCAATCATGATTAGTAATTCCCGCGCACGCGGGGGTGATCCCGAATTACAAAAAATCAATAAAGAGATTCCAAAGTAATTCCCGCGCACGCGGGGGTGATCCTAAAAGAAGCACTACACTTTTGCCATGCTTTCGGTAATTCCCGCACTCTTTGCGGGGTTGG

>NZ_LT635475|2|2|1340669-1341432|CRISPRCasFinder
AAAATTTCCGCACACGCGGGGGTGATCCC	GACGAACAGGACGAGAACACGGAGCTGGCCAA
GCAATTCCCGCGCACGCGGGGGTGATTTT	AGCTCTTGCCTGGTCGCCCATACAAGGCTGTC
GTAATTCCCGCACACGCGGTGGTGATCCT	GAAGATGAAAATGGGTTCTTGAACTATTGTAT
GTACTTCCCGCATTCGCGGGGGTGATCCT	GTCAGTAAATGTCAGTAAATATTGTGGTATAA
GTAATTCCCGCACACGCGGTGGTGATCCT	ATGAGCGACGAACACTTTGCAGGCAATGTATC
GTAATTCCCGCACACGCGGGGGTGATCCC	TATGTAGAATTTCAAGCCAATGTGTTTGCGGAAA
GTAATTCCCGCGCACGCGGGGGTGATCCC	ACAATTGAGTACGCAAAATTAATGCAAAAGAA
GCAATTCCCGCGCACGCGGGGGTGATCCC	AGAAATAGTGGTTGAGCGTAAGTCGAGCAAAA
GTAATTCCCGCGCACGCGGGGGTGATCCC	GAGCTTTAAATCAAAGGAGGAAATTATGAAAC
GTAATTCCCGCGCACGCGGGGGTGATCCC	CTAGCCAATAGTTCTTTAATTCCACCAATTCCC
GTAATTCCCGCGCACGCGGGGGTGATCCC	TTGGTCGACTGTTGAGTTCTCAATCATGATTA
GTAATTCCCGCGCACGCGGGGGTGATCCC	GAATTACAAAAAATCAATAAAGAGATTCCAAA
GTAATTCCCGCGCACGCGGGGGTGATCCT

>NZ_LT635475|2|1|1340669-1341492|CRT
AAAATTTCCGCACACGCGGGGGTGATCC	CGACGAACAGGACGAGAACACGGAGCTGGCCAA
GCAATTCCCGCGCACGCGGGGGTGATTT	TAGCTCTTGCCTGGTCGCCCATACAAGGCTGTC
GTAATTCCCGCACACGCGGTGGTGATCC	TGAAGATGAAAATGGGTTCTTGAACTATTGTAT
GTACTTCCCGCATTCGCGGGGGTGATCC	TGTCAGTAAATGTCAGTAAATATTGTGGTATAA
GTAATTCCCGCACACGCGGTGGTGATCC	TATGAGCGACGAACACTTTGCAGGCAATGTATC
GTAATTCCCGCACACGCGGGGGTGATCC	CTATGTAGAATTTCAAGCCAATGTGTTTGCGGAAA
GTAATTCCCGCGCACGCGGGGGTGATCC	CACAATTGAGTACGCAAAATTAATGCAAAAGAA
GCAATTCCCGCGCACGCGGGGGTGATCC	CAGAAATAGTGGTTGAGCGTAAGTCGAGCAAAA
GTAATTCCCGCGCACGCGGGGGTGATCC	CGAGCTTTAAATCAAAGGAGGAAATTATGAAAC
GTAATTCCCGCGCACGCGGGGGTGATCC	CCTAGCCAATAGTTCTTTAATTCCACCAATTCCC
GTAATTCCCGCGCACGCGGGGGTGATCC	CTTGGTCGACTGTTGAGTTCTCAATCATGATTA
GTAATTCCCGCGCACGCGGGGGTGATCC	CGAATTACAAAAAATCAATAAAGAGATTCCAAA
GTAATTCCCGCGCACGCGGGGGTGATCC	TAAAAGAAGCACTACACTTTTGCCATGCTTTCG
GTAATTCCCGCACTCTTTGCGGGGTTGG

>NZ_LT635475|2|1|1340974-1341432|PILER-CR
GTAATTCCCGCACACGCGGGGGTGATCCC	TATGTAGAATTTCAAGCCAATGTGTTTGCGGAAA
GTAATTCCCGCGCACGCGGGGGTGATCCC	ACAATTGAGTACGCAAAATTAATGCAAAAGAA
GCAATTCCCGCGCACGCGGGGGTGATCCC	AGAAATAGTGGTTGAGCGTAAGTCGAGCAAAA
GTAATTCCCGCGCACGCGGGGGTGATCCC	GAGCTTTAAATCAAAGGAGGAAATTATGAAAC
GTAATTCCCGCGCACGCGGGGGTGATCCC	CTAGCCAATAGTTCTTTAATTCCACCAATTCCC
GTAATTCCCGCGCACGCGGGGGTGATCCC	TTGGTCGACTGTTGAGTTCTCAATCATGATTA
GTAATTCCCGCGCACGCGGGGGTGATCCC	GAATTACAAAAAATCAATAAAGAGATTCCAAA
GTAATTCCCGCGCACGCGGGGGTGATCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT635475.1\|WP_075574489.1\|1328895_1330269_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_LT635475.1\|WP_075574487.1\|1327582_1327915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075574498.1\|1343360_1344551_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_LT635475.1\|WP_075574501.1\|1349121_1349430_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075574496.1\|1339909_1340569_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_LT635475.1\|WP_075574492.1\|1332923_1335671_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_LT635475.1\|WP_075574495.1\|1339201_1339900_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_LT635475.1\|WP_075574170.1\|1349529_1350450_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_LT635475.1\|WP_075574499.1\|1346139_1346382_+\|pro-sigmaK-processing-inhibitor-BofA-family-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075574493.1\|1335657_1337382_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_LT635475.1\|WP_075574488.1\|1327924_1328734_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|379241
NZ_LT635475.1\|WP_075573920.1\|1348147_1348909_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_LT635475.1\|WP_075574494.1\|1337393_1337987_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_LT635475.1\|WP_075574491.1\|1331111_1332578_+\|DUF1846-family-protein	unknown	unknown	gnl\|CDD\|378092
NZ_LT635475.1\|WP_075574497.1\|1342123_1342585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075574500.1\|1346369_1347062_+\|polyphenol-oxidase-family-protein	unknown	unknown	gnl\|CDD\|319354
NZ_LT635475.1\|WP_075573919.1\|1347335_1348220_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_LT635475.1\|WP_083427767.1\|1342995_1343352_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366157
NZ_LT635475.1\|WP_075574490.1\|1330556_1331030_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_157884912.1\|1344784_1346143_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240539

Protein	Function_ID	Function_description	E-value
NZ_LT635475.1\|WP_075574489.1\|1328895_1330269_+\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	9.26409e-130
NZ_LT635475.1\|WP_157884912.1\|1344784_1346143_+\|MATE-family-efflux-transporter	gnl\|CDD\|240539	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.24658e-103
NZ_LT635475.1\|WP_075574500.1\|1346369_1347062_+\|polyphenol-oxidase-family-protein	gnl\|CDD\|319354	cd16833, YfiH, protein of unknown function YfiH. This subfamily contains YfiH, a protein of unknown function from Shigella flexneri, E. coli, and many similar proteins which collectively are often called DUF152. The structure of YfiH reveals a distant homology to Rho-activating toxins cytotoxic necrotizing factor 1 (CNF1) as well as chemotaxis protein CheD that stimulates methylation of methyl-accepting chemotaxis proteins (MCPs), all having an invariant Cys-His pair forming a catalytic dyad, and is required by the CNF-1 toxins for deamidation activity.	2.74215e-46
NZ_LT635475.1\|WP_075574496.1\|1339909_1340569_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.88966e-60
NZ_LT635475.1\|WP_075574492.1\|1332923_1335671_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	8.96444e-89
NZ_LT635475.1\|WP_075574495.1\|1339201_1339900_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.23769e-45
NZ_LT635475.1\|WP_075574170.1\|1349529_1350450_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.59841e-43
NZ_LT635475.1\|WP_083427767.1\|1342995_1343352_-\|hypothetical-protein	gnl\|CDD\|366157	pfam00543, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	5.10203e-05
NZ_LT635475.1\|WP_075574493.1\|1335657_1337382_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	3.64328e-74
NZ_LT635475.1\|WP_075574488.1\|1327924_1328734_+\|C39-family-peptidase	gnl\|CDD\|379241	pfam13529, Peptidase_C39_2, Peptidase_C39 like family.	0.000178388
NZ_LT635475.1\|WP_075573920.1\|1348147_1348909_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	2.85993e-09
NZ_LT635475.1\|WP_075574494.1\|1337393_1337987_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	4.75723e-28
NZ_LT635475.1\|WP_075574491.1\|1331111_1332578_+\|DUF1846-family-protein	gnl\|CDD\|378092	pfam08903, DUF1846, Domain of unknown function (DUF1846). This family of proteins are functionally uncharacterized. Some members of the family are annotated as ATP-dependent peptidases. However, we can find no support for this annotation.	0
NZ_LT635475.1\|WP_075574498.1\|1343360_1344551_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	3.45046e-25
NZ_LT635475.1\|WP_075573919.1\|1347335_1348220_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.90494e-46

>NZ_LT635475.1|WP_075574496.1|1339909_1340569_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVEIDLYNRKTLRDLDHLGCYHGWIEDSFSDDRNKSKADRSRKLWRIDTIKDKSYLLILSEDKPDFNSLEKYGVKGMATCKSYDEFLDSLKEGMRANFRIKLNTVKSIRDKDNPEKRGQLVPVPLDELNDYFMARTEKNGFTVRPDEFSIASRDEEVFVRHDEDKAKAANLKLVSATYEGVLTITDLDKFKKALVSGIGKKKAYGFGFLTIIPIK
>NZ_LT635475.1|WP_075574495.1|1339201_1339900_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTLLLRLKGPMQAWGTSSRFETRTTDYYPSKSAVIGIIAASFGYKRDEVDKVQKLNNLDFAVRIDQEGVLARDYHIASKYKAKGTLDRNYVTNRYYMEDAVFVVAISHADEEWLDEIYYALTHPYFQPFMGRRSCPLPGDFIIGFTDQGPIEALQTLDWQASDWYKKKHKSYRADIYADKDLLPDSPAKMRNDRVISFSQKERKFGPRFEARTDQVLASESDEPLDFYESI
>NZ_LT635475.1|WP_075574494.1|1337393_1337987_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MEDSRLNVYNETAKILRSLDATRDVPSTRAMLANIRNSINKNLSNNMEALAFVFQNIPEELLGSRKELNDYELAILTAVQMYALHQQASVKSVLKLDYQEGEWRQNLGDALSTLRTGESKSIDARFNALVTASNFTQLQNHLRQMIKLLKAKSDEKVDYASLAEDLYWFLRNQKDGIKIKWARSYYKFRQRDSKGEN
>NZ_LT635475.1|WP_075574493.1|1335657_1337382_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSEFNLIEKPWISVVTDYKGTTDLVGLREFFENAHNYIALAGDMPTQDFAVMRFLLAILHTVFSRYQADGQVYDEIKVNDRMQQVEPVDMEDYEDYEDALMQTWKDLWAAGKFPHIVIDYLKEWEDRFNLFHDKYPFYQVTEDVMKRLKLRNQRGPTEQPGFMSFKTINRLISEIKDNTSIFSMISGEDEVSLKSGLSNDKLARWIINLMGYTTSPDKTKITSFDRINSIGKYDGHKGWLYAIGGLHYKTDNLFNTLLLNLILVHPNDKFRYNIQTPLWEFSPKENIEYYLEENSIDNLARLYTDYSRAIKISKEENEYGKYIDIIQLPILDKKENLLECMTIWEKNKKNEKVFSPKENAPHESMWRNFGMIYLKEKSNDDLYRIPGIVEWIRVISKYINLSKVELISLGIKSDGTSSNIMINEIYDELNLNFDISLDCSEQGWVIRVRDVVEQTKEFINKDYKKFIDVVVELEGVDSKKRSDRIKYYLEEIYYKIDKPFRDWLSSIRIGDNKDEKTKEWIERLKKIILNEVEAITNNLSNKFFTGVVVEGKNIKIYKNIATSINELISAINIL
>NZ_LT635475.1|WP_075574492.1|1332923_1335671_+|CRISPR-associated-helicase/endonuclease-Cas3
MEEFLWAKKNRVDNVPMWLPLMVHLNDTMEVCGFLCDHWLSQGVKDFLLDAIQSDAADKEELLKNLCKFIGATHDIGKASPVFQVKDSFYRDQDLDDLMIEKLKGAGFKDLDLYALDKKDNTPHNKSGQYILDKFGVNFCVANIVGAHHGRPLSRHESDECLGFTSSLYQDDNIDSDLANLWQAIHKNIFDWAMSSCDFLSPADLPLISQLGQVILSGLLVMADWITSNEKYFPLIDINENEVDEDRVKEGFSNWYMDRAATWEPKVYFEDIYHARFNFINEPRDAQRKVSEAIAAIDEPGIVILEAPMGIGKTEAALIAVEELAQKTGRTGMFFGLPTQATSNGIFSRVKDWLGQIDGEKSIRLIHGKAALNDEFSSLPKSRNIHGEDGVGVNEWFAGRKVSILDDFTVGTVDQILLAALKQKHLMLRHLGLANKVVVIDEVHAYDAYMSVFLYQALRWLGAYKVPVVILSATLPIAKRNELLKTYMIGAGYKFKKAPKPEGFETNEAYPLLTYNDGQTIKQYSDFAKEPGVDYKIIKIPKDKSDEIIKLIKEIAPNGGVVGIIVNTVKKAQAFAKICSEEFGSDKVDLLHSAFIATDRYKKEKNLIDTIGKGGQRPDFKIIIGTQVIEQSLDIDFDVMITDLAPMDLILQRMGRLHRHEKTLRPQNLKDPKVYVLSCGNYDFDKPSTYVYSEYLLFRTEYFLPDKINLPNDISHLVQLVYDEEDLDLADDLKIVYESYKKKKDKQINEQKYKAENYCISYPLKKTSEDKCISDWIKNSNHAAESSDIKACAQVRDSVDTIEVIALKACQGGYEFFDQPGLLDSSDNKTAMEMAKRSIKLPAALYYGKGIDQVISELEKYYLENFPDWENQSWLKGSLGIIFDENNEFKIFEKTLKYDTTYGLKIIKEDKDERI
>NZ_LT635475.1|WP_075574491.1|1331111_1332578_+|DUF1846-family-protein
MKIGFSNEIYLKEQTKKILNRVGKFEKLYLEFGGKLLGDMHASRVLPGYDPDIKFVLFEELRDKLEVVIAIRAYDIETNKMNNNTGMTYEAECMKLIDTLKEKHILVNSVVINRYYKHENVDGFIRKLNADGIKTYEHEDTAGFPNDIDTILSDEGFGKHSYIETTRPIVVVTAPGPGSGKMSTCLSQLYLENIRGVRAGYAKFETFPVWNLPLKHEVNMAYEAATADLKDVIQIDPYHLEAYGEIAINYNRDIENFPILKRMLDRIMGADAYKSPTDMGVNCIKDGIIDDEVCRQAAKQEIIRRYLNAQFEYKKYMLNGDELANIRRLMDELNLKAEERVSTKAARERKEKIFNEEGIVKNITALELEDGRVITGKESELMDSAAAALLNALKFISGLPDELHMIDPAILNPILDMKRDIEKNSNTQLNLEEVLISLATSQMYNPSAKVSIGNLKRLSGLKGHSTGILPTIDYELFRKLSIDITSDY
>NZ_LT635475.1|WP_075574490.1|1330556_1331030_+|hypothetical-protein
MTLDRIRKIGRYIFFVNVFLLLAGGYYVYGELGRESIEPILVMATFILDEFICRLSLRASIKRNDYRIFTGVSGREDKTLVRARLERSIFINSVASFVGIGAILIPVIIKKYSSIHLFLSLGLFMIVLFTGLVLNKNKQGLVEKKFFEVDLARQNRL
>NZ_LT635475.1|WP_075574489.1|1328895_1330269_+|MATE-family-efflux-transporter
MFNKRVEMLEGPLLGPVILFALPLMLTSILQLMFNAADIIVVGKFASDHALAAVGSTGAIINLMLNIFIGISIGASVVMGRYLGARDYENSQDTLHTSISLSAISGILVLVFGVFTSRILLEWMDTPPEVLDLATEYLRIYFLGMPGFMVFNFGASLLRAAGDTKRPMYFLTLSGVVNVIFNLIFVIVFKMSVAGVAWATVISQYLSAVLIIMSLMKGDDLMRLDVKKLNLNWHKVGAMLKIGLPAGLQGAMFSISNIMIQKSINSFGPVVMAGNTAAGSVEGFVYMGMNAIYQTALSFTSQNMGARNFERVSKIYKTCLAVVTVIGLAMGIGAYAAGTPLLNLYTNDPNVVVYGLERLSIVAVYYALCGIMDVQVGVLRGMGYSITPMIITLVAVCGLRIVWLMTVFQMYHTRLILYISYPVTWTLASIALFINYMYGRKKILLPGMRGEEVNLRI
>NZ_LT635475.1|WP_075574488.1|1327924_1328734_+|C39-family-peptidase
MKRVIALLVALILFASPILAIKSEEGFNKVKKQVLDEYMELKEFREDLKLNPESAMEMIEIIARNRYNYYDYVVSGSKYSKELKAGNNRVKMFKQINDYYCGPASLLTSLYYSNDQGKVAGDNPSSKQETLGEEMETSESSGTMVYRMRDTFNKYTDSKWTYMTKPTYKDLHNFILESLSRGHAPVVHALMEKLPYYNYEKSGGHYITIIYYNDQVPTSSLGIKIMDNNGEQDGKYYGYQFISFDTLMDILNTVDSNGNNRYIIGATRR
>NZ_LT635475.1|WP_075574487.1|1327582_1327915_+|hypothetical-protein
MKKTTFFILCILCIIFLTQNIMANNVNGFIYEEKIGVEFLGVGPGTGGNYKEVRVTVYRSATDTYENRYYYNDGYYSGYIPIYTVNKIPDPRTNVDLLEIVYKGIVYINS
>NZ_LT635475.1|WP_075574497.1|1342123_1342585_+|hypothetical-protein
MDRLKAREIFDKYTKKLRIVPEWDIRLEFVEDEDWKKTGDFKIDPTDKKAILMLNAASPKDENIEETIVHELMHIKMYPLDQVCESMIINMFEEGSREQNFAYQTFFETLEVTVEELAKCFLLEFGENTEFSFGRMKKIKSFNELYDGLKKLD
>NZ_LT635475.1|WP_083427767.1|1342995_1343352_-|hypothetical-protein
MKNVLFLILNETNKLNEILENLVKSGVRGATIIDSQGMGSALSTGDGQLFGGLLRFAIDNNRPYNKVVFTVCDDEETLDKAIKAIQEILGDMTKPGVGLMFTVPVGQIIGVTDPSHRQ
>NZ_LT635475.1|WP_075574498.1|1343360_1344551_-|cation:proton-antiporter
MNISLKIAIIILFGIAGGKVSKRLNLPNVTGYLLAGLLLGPSFLKLVTPDDAGIIEFVNEFALGIIAFAIGGEFFLPDLKKLGKDVFVITVMEVVGVLAIVFVMMRYVLGQSFVFSIIIASMSAATAPAGTVMIIKQYRADGPLTRTILPVAALDDVLGIIAFGICMSLAKISIGATGDVSKVMMFAAPFLEIIYSIGLGFVVGYIFTFLSTKIKSHDHMLCLILVTILGTTGLANMFGISALLCNMVVGATACNLNRNIKRIFDIINEFAPPIHLLFFTFAGASLNLSVLKSIGFLGVVYALSRAIGKISGATIGAKMVNAPPRVQKWLGLALLPQGGISIGLSMIVARELPDHAGEIITVILFSVLVFEIMGPILAKISITKAGEVDGVDKTWK
>NZ_LT635475.1|WP_157884912.1|1344784_1346143_+|MATE-family-efflux-transporter
MLKKILRDKEFVNATLQIAIPVTIQSLIASSLNTLDTFMITKLGTAAIAGVGLANQVFFFFSFFLFGLNTGSAILFSQFNGREDYKSVRKTMILSLKFSFFIALIFNICALTFPNQIIALFIADDPMVIEAGVIYLRAVSSSYIVTALSFAFGVAMRSTGNPRTPLMASIISFFANAFFNYCFIFGKFGMPELGVLGAAVGTIIARFIELGVYIFVVVKYKGPLYFRLAEFFKTDFKFFKNFSLIVIPVILEEILWSFAQVLYNFFYAKTGVDSTAAVQVAFAVSNMLYIFARGLSSATAVVVGTKIGEGDLDRAQDMADKSIIASLYLGAFLGIILILARKYLLLLFDLTPEVRQIAMEALVVMGIFYPIKTANSTIVVGVVRGGGDIKYSLVAETSTAYLIGVPMAYLGAIVLGWPLYGVMVLISLEEVAKLLATLPRTRNKKWIRRLAA
>NZ_LT635475.1|WP_075574499.1|1346139_1346382_+|pro-sigmaK-processing-inhibitor-BofA-family-protein
MSLVAIAIVILVYLILKFSFKTILKLLVNAAVGFVIIIVINAFISMVGGEIPLNFLNSLLIGFFGVPMAIIMVVYYLWIK
>NZ_LT635475.1|WP_075574500.1|1346369_1347062_+|polyphenol-oxidase-family-protein
MDQMKKYADGIYVKEFADGARLFMTGLPYNFRRYNVKNTNKFLRHFKMTNKPISKTRQKHTKNIIVDPHPGEFVGVDGFISDGSPVMVVTADCIPILIKDKNSKRAALLHSGWRGVQKRIYCEAINKLGRRTEMEAYLLPSIQKASFKVSEDFVKEFKGRRDFNKFLTVDEKNPGKYYFDLQKFVKAELIGAGLKAKDIYICKHDTFTSKIFHSYRREKGNYGLNAIIYL
>NZ_LT635475.1|WP_075573919.1|1347335_1348220_-|IS3-family-transposase
MHSKLRQEAQYLTVDIFKEKGYQVKTICEILKISRSSYYKYKKRQKPEKEKQDELLSSLIVEYHRTYDGILGYRRMTMFINKLNHKNYSEQYIYRLMKLLGIQARIRRKKVIRKTIEPFYTRENILKRKFKAEKPNEKWLTDITEFSIAGENKKLYLSAILDLYDNSIIEYELSYRSNAEIVFKMFDKAIDKYPDAKPIFHSDRGCQYTSRAFKRKVEDQGMKHSMSRVGKCIDNGPMEGFFGILKAEMFYGKEFNSLEELKERIVNYIEFYNNERFQKRLNCMAPLEYREHAV
>NZ_LT635475.1|WP_075573920.1|1348147_1348909_-|helix-turn-helix-domain-containing-protein
MGKIKFDLETKIQACREYEKGNKSFIEIAKEINAGDTTVASWYVKYKEKGEEALKSRTSNGSFSKEFKMKVVQDYLTGNYSYQQLGHKYNISHSTAGKWVNMWYNGITLKDTKQKREENSIMKAKQTTYEERIEIVKWILDNNNNYNKAAEKFNLNYALVYKWTQSFLKEGEEGLKYKKRGPKFKTEIDESKLTDTEKLKLELEKEKEIRKRLELELEVLKKKEAMEKQLYTQNYVKKLSTLRSTSSKKKDTK
>NZ_LT635475.1|WP_075574501.1|1349121_1349430_+|hypothetical-protein
MKRFNLFIIIAIIFAMVFTMACSKKVEDPATGKRPITDEKADASEETTTDEKTDAGERADAGEEVDTSESQLTSRDPFKSLVGCSQKVGQIICSSKRMLSTC
>NZ_LT635475.1|WP_075574170.1|1349529_1350450_-|IS3-family-transposase
MFKRVEEDSTSRKNEEKTRIAEDLRRQYPLKTILEVIGLARSTFYHNLDRMREPDKDSELKLKMLEIREAHPNYGLRRIHAVLKMDEEINIKKVHRLYKELGMQIKTKKTRKPYTFLGSLKDIPNRIKRRFDSTMPNLKLFTDTTYVKIYKDKENYTWAYLNAFIDGFDRKIISYNVVDNMRKEPFIDLAKETIRKTNNAEYRRTFHSDQGIIYFSKEYQDLLKENNIYQSMSRKGNCLDNSVIESFWSVIKREKLSKTKFKSLEQLQKAVDEFVEYYNNTRIKEKNNYLSPNEKRAKYYEEKERA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT635475_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT635475_3

1695213-1695298

Orphan

Consensus_repeat	Method
GGGCGCGACTTTTCGGGCTACAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT635475_3

>merge|NZ_LT635475|3|1695213-1695298|CRISPRCasFinder
GGGCGCGACTTTTCGGGCTACATTCTCCTCAGATTGTTGCATCCAATTAGGAAAAATTCTTTTGGGCGGGACTTTTCGGGCTACAT

>NZ_LT635475|3|3|1695213-1695298|CRISPRCasFinder
GGGCGCGACTTTTCGGGCTACAT	TCTCCTCAGATTGTTGCATCCAATTAGGAAAAATTCTTTT
GGGCGGGACTTTTCGGGCTACAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT635475.1\|WP_075574789.1\|1693961_1694753_+\|class-B-sortase	unknown	unknown	gnl\|CDD\|320675
NZ_LT635475.1\|WP_075574795.1\|1701147_1702527_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
NZ_LT635475.1\|WP_157884920.1\|1679324_1680206_+\|YegS/Rv2252/BmrU-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_LT635475.1\|WP_075574793.1\|1697838_1698495_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_LT635475.1\|WP_075574785.1\|1683693_1684701_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236863
NZ_LT635475.1\|WP_075574784.1\|1682289_1683459_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349882
NZ_LT635475.1\|WP_075574783.1\|1680759_1682100_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240542
NZ_LT635475.1\|WP_075574782.1\|1680214_1680661_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LT635475.1\|WP_083427795.1\|1704188_1706819_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|100095
NZ_LT635475.1\|WP_075574786.1\|1684693_1685332_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_LT635475.1\|WP_075574792.1\|1697560_1697842_+\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
NZ_LT635475.1\|WP_157884922.1\|1703465_1704116_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|226129
NZ_LT635475.1\|WP_157884919.1\|1678117_1679335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT635475.1\|WP_075574790.1\|1695627_1696332_-\|FAD-dependent-thymidylate-synthase	unknown	unknown	gnl\|CDD\|376804
NZ_LT635475.1\|WP_075574791.1\|1696494_1697355_-\|Abi-family-protein	unknown	unknown	gnl\|CDD\|377910
NZ_LT635475.1\|WP_075574794.1\|1698503_1700297_+\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NZ_LT635475.1\|WP_075574797.1\|1706820_1707648_+\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_LT635475.1\|WP_157884921.1\|1700306_1701209_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_LT635475.1\|WP_075574788.1\|1686665_1693949_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273344
NZ_LT635475.1\|WP_075574787.1\|1685452_1686256_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381

Protein	Function_ID	Function_description	E-value
NZ_LT635475.1\|WP_075574789.1\|1693961_1694753_+\|class-B-sortase	gnl\|CDD\|320675	cd05826, Sortase_B, Sortase domain found in class B sortases. Class B sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They can have radically distinct functions. Some members of this group attach haemoproteins to the peptidoglycan of the cell wall, while others assemble pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. In transpeptidation reaction, the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class B sortases normally recognize the consensus NP[Q/K][T/S][N/G/S][D/A] motif), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase B protein from Staphylococcus aureus (named Sa-SrtB) cleaves surface protein precursors between threonine and asparagine at a conserved NPQTN motif with subsequent covalent linkage to pentaglycine cross-bridges. It is required for anchoring the heme-iron binding surface protein IsdC to the cell wall envelope. SrtB contains an N-terminal hydrophobic region that functions as a signal peptide/transmembrane domain. At the C terminus, it contains an essential cysteine residue within the catalytic TLXTC signature sequence, where X is usually a serine. Genes encoding SrtB and its targets are generally clustered in the same locus. The prototypical class B sortase involved in pilus biogenesis is pilus-specific sortase C2 from Streptococcus pyogenes (named Sp-SrtC2) that anchors a surface protein containing a QVPTGV motif to the cell wall, as well as polymerizes the major pilin subunit Tee3/FctA and attaches the minor tip pilin Cpa. The linkage of Cpa to Tee3 by SrtC2 requires the VPPTG motif in the cell wall-sorting signal of Cpa. The family also includes SrtB enzymes from Bacillus anthracis (named Ba-SrtB) and Clostridium difficile (named Cd-SrtB). Ba-SrtB is thought to recognize the NPKTG motif, and attaches surface proteins to meso-diaminopimelic acid (mDAP) cross-bridges. Cd-SrtB does not play an essential role in pathogenesis. It cleaves short [SP]PXTG motif-containing peptides between the threonine and glycine residues and then covalently anchors the threonine residue to a nucleophile such as glycine or mDAP, but not to the peptidoglycan of C. difficile, suggesting a novel association of sortase activity with cyclic diGMP (c-diGMP)-mediated regulation to control levels of cell wall anchoring and secretion of putative adhesion molecules.	9.18526e-48
NZ_LT635475.1\|WP_075574795.1\|1701147_1702527_+\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	7.83055e-20
NZ_LT635475.1\|WP_157884920.1\|1679324_1680206_+\|YegS/Rv2252/BmrU-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	7.23433e-80
NZ_LT635475.1\|WP_075574793.1\|1697838_1698495_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	7.62845e-112
NZ_LT635475.1\|WP_075574785.1\|1683693_1684701_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	8.54005e-164
NZ_LT635475.1\|WP_075574784.1\|1682289_1683459_+\|amidohydrolase	gnl\|CDD\|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	7.44002e-148
NZ_LT635475.1\|WP_075574783.1\|1680759_1682100_-\|MATE-family-efflux-transporter	gnl\|CDD\|240542	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	5.06108e-95
NZ_LT635475.1\|WP_075574782.1\|1680214_1680661_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.40372e-16
NZ_LT635475.1\|WP_083427795.1\|1704188_1706819_+\|phosphoglucosamine-mutase	gnl\|CDD\|100095	cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_LT635475.1\|WP_075574786.1\|1684693_1685332_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.519e-89
NZ_LT635475.1\|WP_075574792.1\|1697560_1697842_+\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	1.11542e-25
NZ_LT635475.1\|WP_157884922.1\|1703465_1704116_+\|ECF-transporter-S-component	gnl\|CDD\|226129	COG3601, COG3601, Predicted membrane protein [Function unknown].	1.03637e-14
NZ_LT635475.1\|WP_075574790.1\|1695627_1696332_-\|FAD-dependent-thymidylate-synthase	gnl\|CDD\|376804	pfam02511, Thy1, Thymidylate synthase complementing protein. Thymidylate synthase complementing protein (Thy1) complements the thymidine growth requirement of the organisms in which it is found, but shows no homology to thymidylate synthase. The bacterial members of this family at least are flavin-dependent thymidylate synthases.	2.00953e-46
NZ_LT635475.1\|WP_075574787.1\|1685452_1686256_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	6.77296e-118
NZ_LT635475.1\|WP_075574794.1\|1698503_1700297_+\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NZ_LT635475.1\|WP_075574797.1\|1706820_1707648_+\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	3.25124e-65
NZ_LT635475.1\|WP_157884921.1\|1700306_1701209_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	3.60123e-78
NZ_LT635475.1\|WP_075574788.1\|1686665_1693949_+\|hypothetical-protein	gnl\|CDD\|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	1.99869e-08
NZ_LT635475.1\|WP_075574791.1\|1696494_1697355_-\|Abi-family-protein	gnl\|CDD\|377910	pfam07751, Abi_2, Abi-like protein. This family, found in various bacterial species, contains sequences that are similar to the Abi group of proteins, which are involved in bacteriophage resistance mediated by abortive infection in Lactococcus species. The proteins are thought to have helix-turn-helix motifs, found in many DNA-binding proteins, allowing them to perform their function.	8.06941e-57

>NZ_LT635475.1|WP_075574789.1|1693961_1694753_+|class-B-sortase
MKKGKLLLNILIIVVAIFFAYKLYDFLHTKADQKESIQIYSDLKDLKPVKEEAAVKVDEDIEEEEDDDYEIDFGQLKSVNEDIIAWISDGGSIDYPIVQGKDNYKYLYTAATGKRNVAGAIFMDYRNMSIADPLVLIYGHEMDNKTMFGTLHEFKREPEHLDFTFTTEEGEFETKAVVAGIISGETYINPKDYNSFEKMQRFYKLIKDNAVYDSGYELEEDDKIIALITCTYERKNVRLVVLTVYNDKDEDGKSKEIQVEDDM
>NZ_LT635475.1|WP_075574788.1|1686665_1693949_+|hypothetical-protein
MNRKFKAAAWAVLLILFVLSGVIVHAQDETMSTNTPESILEETSKEEIIEEGDKDVEVLFDASKDLVNEAVQAGAANGENGEPGTEEPGTPEESGTEEPKTTGDESDSTGEGGEGTTGGESAGDETGTPDGTETPDGTETPDETEKPGDGEPADDDQSEADADKPKENPEPAKPQVDPNTDELNELQKQIAAAKEQKDDKKVAELQKQYNDKLLKNIEESGADKLDKDVINGITDPEKIKQYKDIQELYDKIQADKNDGKLNQADIERLNTLLGEFKPPRKLTDEEKKAQEDLNKDFEIPGIKGEDTKDKVFEKYQDAKEALEKALDPNENPVSKEKLERLKKAYKDAKDALDAAIEKGDIDPKYTDGTPEVRVYPLDGSTAGPELKNKDETYYIPDNTSAKLLIEVRKDDGGDFTFTIKPNKTDKNIPDAVLEDLVRTKDGKAIKLTKDEDGNYTFTTSNKFEIAQIQMNLPAFRAAFHEGFEITMQAGNEKAVTKKFLITKKGYDDADIGTIGKEGPKDPQEIDGGDTKDGIVDEDTKKVYDIFAMIKETDGYIDDVIVNSGNGESLPLSSVDITITLPKYSDKFAKYLYKSGLKYDLIDAEKGQYRLKLDTKVFGGNLIEEDGQLYRKDEDGNKTGEALTPADLKGFILEKAGKKVYVDEKGEKHDVTTEEYYEGGDYKVEKGVLYKKNGENFTKIGDFKDGKLKKDGTTYVFNNGKLISYTEERDLFEGNVSNKKNDKTNEFEADLDVTPTFNGDQVIIKTGDNKQAYGGTIINNGIFDKDGKYTGKTSTKTGYQGFKNIYVDEFGKKVDNPTDEEKANLTPVEKGVFNKDGYLISGLNYNEGYTLIDKFGKIMDGITVKKNGDNYTFAKEGKDSKTSGSDGITVETGQKFVGNDNYIVDQNGYEGFVGKYYYDGTKFVPVKDDKGIKGNKYYKDYKSSAMDHKKVDSYTKDGKKEILENKETYHGSTKPEDYVSVDGKTYVKKQAGSLVYYVGVGKNNQAEVLSVEEISKIVQILKGEDGKEYEKLTDETDIAEAVKNAKFQIKFPGFLAGKDVVYSIHADIAATYMAPNPKFDPKKEESENNKKFVETSIFKNQKADYKKPIEKYFTLKVKEGQPASFFKNPPKELLAKPDYNFFNIFYRDETHRDRDDYIKHLLEIEDDEDAKVDPKNKADMDILKKIQSELGRLYNGAKFALVEVEKDGKKEKELVILDKNGEEIKLDRSLLWEVGFNNPDGALFPENKDSEIIIEDRNMDNRLIYDEIIVNDTQDKWNTLKEEFESKKENKGKKFGNDQYFFLDQIKDIRFGVSPTYIDGRFVPLGKDFKLEAKDIIDELNKLTDGNNEVTITKDDVEYKITRDTANGQIRIKVMNAFYKKVDNDPTHKFESPVQKDYQGKINGVLEKVNKLDKNSTDDFINGIVESLHAKGTDCHDTITKMLKDEFVKIKTDAKKLQAFKTKLIAEVEKLKLGYFDEKKGEYKYDDMRFNAIRIGLKSGLRIGGPTDPVKTKKIGITSVIIPEVDIPYTDEFGKPLTNKDKYVQEEIGNIIKDHKFNDKEDNNFKFFDEQVNPIWNKDEDSFRKVMEEAYRRVNKMDENTFKTLVTVNDKEKYGQGKYTVIPGKELSFDDLANGDKALKDSKGQPLNPYYVGDKKDGKATTIEEKITDPELKKTDAYKKLINRPIDIAGYYMSKLGYNGAMYANKANYKLIGGKDQAPGIFGKDDDWHKKICYPGLGSCIEDAGSDSESDKTEGGNKYGSEGETGSEFELTYEPTPKTPDEEHPEVDKKSETDKVDVTEEPEKKVDFTIDVTVDKLKKDDKKLSEAVKEDSEKIDDANYNDKGYYIYRDGLIIDILPDIFEFTKETGISIEVDKDAMRANGANADLDFEGFKNDIKYFYTEDVKAYLAELRAKDEKKYNVLLKALGGDENKIKDGQRAILAWLPEFEGPHGAKNQFKMTLTNLLVNKEKYKESEKYKNQGQPYTNKGGFGDKGEFFFGEKTITVTDGHNANVNKYLQLLDKDGNVIKKDEAGEWFKGSATLKFGDKFNYKIKYYLDNKGLVDTGFVQKDKEWKLEDLFDGYKGLRPVLRDFVQVPDGFTVLYKVNGEYKSEITKDELAKVEGIKINPPQAGFPYNEEKEFILPMMIPELDAKIENGNVVYVGKDGEKKILGKADEFFNLSDLTNKDAKMYFENTAEGSNTVTVYLEKERFIKLFKEFYEADGKTEIKKDRPQVKFDIWQIATDEKGNKTKIKLDKELTLNEANDFVDQVNHLPLFKRIEEMDEKGNVSVKIISYTYEVQEQAIEGYTGKVFKFDNKDELGFVLKAENYKKPDEPDEPDEPEEPEEPEEEEPKEPEEPEEDEPKEPEEPEEDEPGEPDEPETPDEPEDQGGGRNTIPKTGVRTDLGSIFFSGILLLALFFFKRKFFKN
>NZ_LT635475.1|WP_075574787.1|1685452_1686256_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKTLTILTIVLALAFTFVGCKKESGDLTKIKVGVSPVPHAEIVEALKDEFKAQGLDVEVVTFTDYVQPNIALAEGDLDLNYFQHEPYLKEFCESRNLDLTSIGAIHLEPMGLYSNKVKSLDEFKDGDEIVIPNDPSNGARALRLLEDAGLIKLSDYNSESITEKDIVENPKNLKITAVDAATVAKAYSDVAGGVINSNFALGVGLNPKTDPLLIEKTEGNPNANIVAARTDDKDNEAYKKFVQVLKSDKAKQFINEKYDGSVIPVE
>NZ_LT635475.1|WP_075574786.1|1684693_1685332_+|ABC-transporter-permease
MFDILKTATWETLAMVSVSSFFAVLIGLPIGLVLFATKKDSIAENKAFYKILDVIINIFRSMPFVILMIVVFPLAKLIVGKKIGMVAAMVPLSVAAAPFVARMMENVFSEIDKGIIEALKSMGATNFQILKVVLKESKPGVIDAVTMTIINLIGYSAMAGALGGGGLGDIAIRYGWNMNQTDMLMAAVVIIVIIVQIVQRLGTNLAEKSNKK
>NZ_LT635475.1|WP_075574785.1|1683693_1684701_+|ATP-binding-cassette-domain-containing-protein
MIKVSNLKKVYQIDGKNFNAVDDVSFEVDKGEIFGIIGLSGAGKSTVIRCINRLDEPTDGKIEIDEVEMTSLNKNELLSKRKDIAMIFQHFNLFNQMTVFENVAYPLRLAKWTKADIEKRVDEMLDFVELKNRKNSYPAELSGGQKQRVAIARALATNPKILLSDEATSALDPSTTKDICDLIKRSAKVYGTTVIIITHQMEVAKDICNRIAVMENGKIIEENEAEELFRNPREKVTRAFIEAIPISEEAKYHDYESKGRLVRLTYDGATADTPIISQISKDFDVKINILSGNINKLVDTSVGYLIVEFIGEDAEIDRTLKYCKDGGINLEVLNV
>NZ_LT635475.1|WP_075574784.1|1682289_1683459_+|amidohydrolase
MNKYYEQAKKLQAKMIEQRRDLHQMPELGLDLPKTSAYVEEKLKALGLEVKRYGTSGLSATIKGGKGEGKTILLRADMDALPMEEINDLDFKAEGTCAHTCGHDLHTSMLLAAAEIINDNKDDFKGNIKLMFQPAEEIFKGSRMMIEEGLLEDPKVDVAFAMHTGLDHLPGSISYNTGYMTTSCDNFKIEIKGKGAHGAYPHTGIDPINAGVLIYQQFAQLISRDNTPQATTTLTFGQFSAGSNSNIIPDTAVMQGTMRTYDPEVRDRLKKRMIEIIEGAEKVTGTKIDLDFFSGVPSTYSNPELTGEFVDIIKNANPDIEMIDGLLIMASEDFAVIAEKVPSVYIMCNCKVEGNNFSHHNPGVLFNEDAMPIGAGTFASFAIEWLNKN
>NZ_LT635475.1|WP_075574783.1|1680759_1682100_-|MATE-family-efflux-transporter
MDKKNFYKKALKMAWPSVLESFFLSLAGMIDTLMVSALGPAAIAAVGLTNQPKFIGLAVFFSISIAVSALVARRKGQENKEGANQILVTAFTVVLILTVIITTVMCVWADPILRAAGSNADTHQIAHEYFLIIMGFCIFNTISITINAAQRGSGNTKIAFTTNFVSTIVNITFNFLLIKGRFGFPALGIRGAAIATVIGAFVAALMSIRSLFKKNSYVSIPFIIKNKIKPSKDALKSISLLGSNLLIENFAMRVGFLTTAMLAASLGTEQFAAHNVGMQFLSLGFAFADGMQVAAVSLSGQALGAKKPDEAIMYGHACQKIGLGISVILSLLLFTFGDKLYGLFFDEAHIIEYGLLIIKFITVIVLLQISQIIYGGVLRAAGDVKYTLLSTIVSVTIIRTAVTYVLVKVMGLGLTGIWIGVFSDQFSRFIFNSLRFKSKRWIKIEI
>NZ_LT635475.1|WP_075574782.1|1680214_1680661_+|MarR-family-transcriptional-regulator
MNDKKFNDDIVEIEEYIRYLDWKIRLKGRTILADEDITPLQFYALQMIKYQNGKATPKYLTNLLKIAPSTVSDMIRKMEETGYIKKEVTEYDKRSFYIDVTDKGNRVIDDVIEERHKFLQKCLADESDQEIEKIREGLKHLYEVLKKQ
>NZ_LT635475.1|WP_157884920.1|1679324_1680206_+|YegS/Rv2252/BmrU-family-lipid-kinase
MRIRFIINPSSGREKSRDTMIAVSKFLLEDGHEISARYTSKKDDAILFATEAVKDEVDRIVVIGGDGTVNEVVAGIVSQDSKIPLTIIPCGTTNDFAKYMKLCKSNYETYESIVGDNFKDIDVGICNNKYFINVGAVGILTDVAHNTPKSLKSVFGRSAYVLKALSEINPENLKPMNMTIESEEFSEELMAYLFLISNTQSIGGFDKMAPLASVSDGKLDCIIVKEMPIVDLISCFMKIRDGKHINHDGVVYFQSSDVKLYCDQEVELDVDGEYFGDLPAHFSVCKEALRITL
>NZ_LT635475.1|WP_157884919.1|1678117_1679335_+|hypothetical-protein
MIIVKKRFILLIIFAMLFTGCSQLVKPREEKVEVVEPEDQEEEVFMGDDTMDRYRRKYVNDAVVIDSEELTDLVADFWSRITLGDMNFTNLIYLPEEKMESLKAMMDTEDGRRAIAKMLAKSTIEADGINEAVFLKINLDSKGNCFKNENMSNIVYTGVSHKYFYDILSIESKEPKTIAEDLIKYIEDYNNSYKAVDQNDTAFNFVYVDGEPKIDGELFFGMFGLFDKLGPKQEYITDLVKDAYYEDAAGMGDMDKMYEHFSNGEYIWMYELLRKSELLDVIPYSPKDSIRKLYSLSSDQRSDFMAEMRRLPKPILRFVKKNNKDCLLGVYFYKDMYGEFPTGNIVDDYFEMDGIKKFDGVVIDNVIKNLLLVQGINVDIFDGSEAQEDTQEETKEDENGGKDEN
>NZ_LT635475.1|WP_075574790.1|1695627_1696332_-|FAD-dependent-thymidylate-synthase
MINVLDKGYVRLVDTMGSDLTVVNAARASFAKESKELDEKDERLIAYLAKHDHTSPFRHAMLQFEVYAPLMVARQWWKYIIGSSHLEGIGDTMNAWNESSRRYVTMEPTFYVPTKNEWRGKPDNNKQGSLGPVDDELGAEFTEKLNKYIKEGVDLYEEAMERGICAEEARLFLPAYGMYVSWYWTASLQSVAHFIKQRTDSHSQYEIRLYAEAVKELAMEKFPLGIQAFLDMDK
>NZ_LT635475.1|WP_075574791.1|1696494_1697355_-|Abi-family-protein
MKKSYQPALDLNQQINNLKSINLIIEDESYAKSILERVSYYRLIKAYSITLKENGRYINGTSFDNIVDLYLFDMELRHILFPLIEHVEVYLRAAITNHFSLKYGNFGYKDINNFNNKDYQQKTLSDLYREINRNRKSPFIRNFQNNYEGGEIPLYAALEVANFGTISKMYKNMKNEDKKEISKIFEVDYTYLESWIENLSYVRNICAHYGRLYGAKFTKTPKLYKEYLKLGVSNNTLFASILNLKIISEENHYIKFCNKLIEIIKKYPCIELKHLGFIENWEELIL
>NZ_LT635475.1|WP_075574792.1|1697560_1697842_+|DUF503-domain-containing-protein
MKVLASEIIIRLTDVHSLKEKRSIRESLIRKVQNKFKISIAECDSQDDLDFLTIGFAAVSNSNTHLNSVNEKVIHFIETYYGLDIVSKETYWL
>NZ_LT635475.1|WP_075574793.1|1697838_1698495_+|endonuclease-III
MRRKLKKAEIQEVTDILMDFHADAECELVHESPFELLIATILSAQCTDVRVNMITQELFKEANTPQAIIDMGMDKLKDYIKTAGFFNSKSKNIMETCHILVDEYDSRVPDTMEELTKLPGVGRKTANVVLSNCFGLPAIAVDTHVFRVSNRIGLVHEKDVEKTEEALMKALPKEIWTKMHHVLIFHGRYICKARKPMCHECPISHLCLYNQNNINKRK
>NZ_LT635475.1|WP_075574794.1|1698503_1700297_+|oligoendopeptidase-F
MDYNFKSRDEIDQKYKWSLEKLFTNDEDLDKKLKEIEGKIEDFKKFKGRVAESADTFLEMLKLYEDIGTNFGLVSTYISNRFNEDNRDAKYQALSDRLSALYTSYGAGSSFLVPEILSSDVDKLRSFVEKDELKIYKRWLDNILRFKDHTLSEAEERIIASFTPVIDAGSKSFSMLTVADMKFPVVNVDGKDVELTSGNFVPLLTEANLEDRKNVYEAYYNVYKDHINTLASTLDANTKAIAIEASLRKYKSAREAALYDNTIPVSVYDKLIETVNKGLVELHDYVDVRKKVLGLDKIHMYDVYKNLVEDMDVKFTFEEAKEIILDALKPLGDKYIADLTKGFEDRWCDVFETPGKRGGAYSSGSYLTDPYVLLNYHGTLDDVFTVAHEMGHSMHSFYSRGNQPYIYSGYSIFVAEVASTMNESLLTFYLLDKWKDDPKKKKFILNHFMDSIKGTLFRQTQFAEFEMEIYKAYESGQALTPDFLSSKYEEINQKYYGPSMEKDDFIKYEWARIPHFYYNFYVYQYATGISAALSFAKRVLNGGEKERDMYLEFLRSGSSLDPIDVLKRAGVDMNSPQPIEDAIELFKEFKDEFKKLI
>NZ_LT635475.1|WP_157884921.1|1700306_1701209_+|TIGR00159-family-protein
MGFSLENTLLSMRESIRNFRFNNVIDILIIAFIVYQLYELVKQTRAEQLAKGLVILLVVTKLSEWFKLYTLRWLLNWLLGAGLIAIVVIFQPEIRRAFESIGRSKIIGKRFGTNSDNQYDGVIEEIVQACNSLSRQKIGALIVFQRQIGFEDIIETGTKIDGLVSMGLLINIFIPNTPLHDGAVIVDRDIVKAAACFLPITDNNRLSKELGTRHRAALGISERSDCMVIVVSEETGGISCCENGEIARYLDEETLRKKLREVYNPKEEKLGFIAKIKGEFNEAKEKEEQSKESQESESGR
>NZ_LT635475.1|WP_075574795.1|1701147_1702527_+|hypothetical-protein
MKLKKKKNNQKNHKNQNLVAKIMSLVIAVLLWSYVMTIENPDERRVIRNVRVKFLNADLLRDSDNQLMTQEDQFVNITLRGKKNELEKVRADMINASVDLEGYGAGNTRIPIDVNLEGVSSLVSVDTISPPSIIVNIDKIVSRDFEVQVDTKGNPKENYMKGDNQLSSPKVQVTGPASQIGIIDSIRTNIDVDGKEKGFTVTNPLYAVDANGNRLSNVSIKPDVVTISVPIYKTAVLVIEPSTVGNLPVDFETTLMHVNPPTIAVKIIDENAVVPKTIKTEPINMEELVSSDEKMLTPIIPEGMEAIDPSITYSLTYQIQKYTTKRFAVDKSQIKFKNLPEHLNVDLGSLPTIVDITVRGYEKELKALNTGDVVLAVNLENAEIGEDSYNLKLQIKDKPSLSLIGAPKIKLNIIGKENSEETPEEKPDEKPGEENGEGTEENNESKDNEKPDEKPDEKQ
>NZ_LT635475.1|WP_157884922.1|1703465_1704116_+|ECF-transporter-S-component
MKMKMSTKKMTALAMCAAISYLVMVFGRIPIVLFLKFDPKDAVLAITTLIFGLVPSLLVTAVVCLVEFFTVSDTGFWGLLMNFVGSAAFIVPLATMVNRKDDTKWTALALLVSTLVMTFIMLAWNIVITPIYMKVPFAEVKKLLLPAILPFNIFKGLLNSALTFVALPIVPRLKKTLDLQDEEVDHIGIGQVAWISSLLLVSALIIYYALNSPMGK
>NZ_LT635475.1|WP_083427795.1|1704188_1706819_+|phosphoglucosamine-mutase
MMDGYVYKILNKIEDTGNTAYVVGGAVRDYLLKRKIHDYDITTSLNPKELKKLFPNSIMVNKKMGTVTVKGIEITPYRIESAYEDGRRPSKVRFSRLLEDDLVRRDFTINAIAMGKDGNIVDKLSGRDDLDKKIIRCVGNPDRRFREDALRMLRAIRFACQLDFRIEGRTLRAIRRNADLIYKLSTERVRDEFNKILLSDNVILGLDLLRSTGLLERIIPEYKNTYDYDQLNHHHKYDLYNHMIRVVKFSNKDLPTRLAALLHDIEKPSCQEVFADGTAHYYGHDKKSAQTARRILKDLKYPKATVDKAGKYIENHMNADPNIGLRGVRRMRNKFGDDIYNFLSLLYADSVSASGEDLEKIDKLHKMLDNISQEEDFNKGNEICINGNDLINIGYKEGVKIGEALCKLKDLVELGLKNNRETLLSIAKEFQSGGNMKKYFGTDGVRGIANTELTNEFAYKLARAVGKFIEGNKRVVLGMDTRLSSPMFMASITAGLMAEGVEVDQVGVISTPGVAYITKTHGYGMGIMISASHNPYMYNGIKLIGADGYKLSDDEEIVIENMIDNLEAETYDGDKLGKVSIAKDLFNDYLIHLEGLAGDGFKGMKIAIDAGNGVMSEIAPKVFRELGAEVIKINCDSNGRYINDKTGSTAPEKIAKLTKDEDCDIGVAFDGDADRVIFADEDGNVLDGDHIICYGALCLKEEGRLSNNGVVTTSMSNGAFEKYLKDHEIELIRADVGDKYVMEAMRKNGMVLGGEKSGHIIFLDHLTMGDGLQTAIIILNMLKKRGEKASTIGKLYQDYPQVLVNADASDEIKKTYKENKNISKAIDNLLEKHPDYRILIRPSGTEKFVRIMIEGSPIGEIIVEANNLKAIIEKEN
>NZ_LT635475.1|WP_075574797.1|1706820_1707648_+|DegV-family-protein
MKQLIVDSSCELTDDMIKSMECSMVPFIITMDGKDFIDDENLNMETFFETMDNSSDVIRTACPSPDEFLKRMKGDEIYVITITSKLSGAYQSAMIAKQMYLEKHPEAKVHIFDSKSATAGESGVALIVDELVGMGKSFEEVVAETEKKIDESITLIALSSLNNLARNGRLPKIAGKLSKVLNIRLIARNKDGEISPLSIERGLKRTLNSLIKKCEEYGNKVCEYAIVISQANAVEVAVELKNRLMEMFPSRPIEITSMKGLSSTYAEEGGVVVFL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	HQ906663	Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA2, complete sequence	23040-23071	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	LC425526	Uncultured phage DNA, contig: NODE982	6113-6144	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP018745	Borreliella garinii strain CIP 103362 isolate 20047 plasmid p_lp54_linear	9656-9687	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	6653-6684	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP028862	Borreliella garinii strain 20047 plasmid lp54, complete sequence	47801-47832	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	6509-6540	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	6509-6540	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	6465-6496	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	47217-47248	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	6503-6534	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	48803-48834	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_013128	Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence	4218-4249	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	6494-6525	6	0.812
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	6509-6540	6	0.812
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	JN564907	Burkholderia phage AH2, complete genome	7721-7753	6	0.818
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	JN564907	Burkholderia phage AH2, complete genome	7722-7753	7	0.781
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	436667-436698	7	0.781
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	KY303907	Enterococcus phage EF-P29, complete genome	6048-6079	7	0.781
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	MK570225	Enterococcus phage vB_EfaS_PHB08, complete genome	4392-4423	7	0.781
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	KX431560	Cronobacter phage vB_CsaM_leN, complete genome	99611-99642	7	0.781
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP045269	Bacillus megaterium strain FDU301 plasmid pFDU301G, complete sequence	5396-5427	7	0.781
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	LC425526	Uncultured phage DNA, contig: NODE982	6113-6145	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP012385	Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence	100857-100889	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	41955-41987	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	235017-235049	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP028862	Borreliella garinii strain 20047 plasmid lp54, complete sequence	47801-47833	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	109021-109053	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	114211-114243	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	47217-47249	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	48803-48835	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP018745	Borreliella garinii strain CIP 103362 isolate 20047 plasmid p_lp54_linear	9655-9687	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP012367	Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence	160904-160936	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	159803-159835	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	6652-6684	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	149688-149720	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	6508-6540	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	6508-6540	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	6464-6496	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	6502-6534	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_013128	Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence	4217-4249	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	63416-63448	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	68597-68629	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	6493-6525	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	146059-146091	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	50377-50409	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	55567-55599	7	0.788
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	6508-6540	7	0.788
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP045332	Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence	2329-2360	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP039915	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence	8813-8844	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP024589	Roseomonas sp. FDAARGOS_362 plasmid unnamed5, complete sequence	9137-9168	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP045348	Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence	15159-15190	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP045337	Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence	19079-19110	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	1225231-1225262	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP043045	Gluconobacter thailandicus strain HD924 plasmid unnamed2, complete sequence	53044-53075	8	0.75
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	NZ_CP014690	Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence	213422-213453	8	0.75
NZ_LT635475_2	2.4\|1340881\|32\|NZ_LT635475\|CRISPRCasFinder	1340881-1340912	32	MN693083	Marine virus AFVG_25M55, complete genome	4964-4995	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP012367	Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence	160905-160936	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP012385	Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence	100857-100888	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	41955-41986	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	235018-235049	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	159804-159835	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	149689-149720	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	237114-237145	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	109021-109052	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	114211-114242	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	63417-63448	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	68598-68629	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	146060-146091	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	50378-50409	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	55568-55599	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	KX119188	Helicobacter phage FrB41M, complete genome	24698-24729	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	KX119192	Helicobacter phage Pt1918U, complete genome	24857-24888	8	0.75
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	KX119191	Helicobacter phage Pt4497U, complete genome	25582-25613	8	0.75
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	NZ_CP045332	Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence	2328-2360	8	0.758
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	NZ_CP039915	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence	8812-8844	8	0.758
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	NZ_CP024589	Roseomonas sp. FDAARGOS_362 plasmid unnamed5, complete sequence	9137-9169	8	0.758
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	NZ_CP045348	Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence	15158-15190	8	0.758
NZ_LT635475_2	2.13\|1340697\|33\|NZ_LT635475\|CRT	1340697-1340729	33	NZ_CP045337	Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence	19079-19111	8	0.758
NZ_LT635475_2	2.21\|1341187\|33\|NZ_LT635475\|CRT	1341187-1341219	33	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	436666-436698	8	0.758
NZ_LT635475_2	2.21\|1341187\|33\|NZ_LT635475\|CRT	1341187-1341219	33	KY303907	Enterococcus phage EF-P29, complete genome	6048-6080	8	0.758
NZ_LT635475_2	2.21\|1341187\|33\|NZ_LT635475\|CRT	1341187-1341219	33	MK570225	Enterococcus phage vB_EfaS_PHB08, complete genome	4392-4424	8	0.758
NZ_LT635475_2	2.21\|1341187\|33\|NZ_LT635475\|CRT	1341187-1341219	33	KX431560	Cronobacter phage vB_CsaM_leN, complete genome	99611-99643	8	0.758
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	KX119188	Helicobacter phage FrB41M, complete genome	24697-24729	8	0.758
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	KX119192	Helicobacter phage Pt1918U, complete genome	24856-24888	8	0.758
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	KX119191	Helicobacter phage Pt4497U, complete genome	25581-25613	8	0.758
NZ_LT635475_2	2.1\|1340698\|32\|NZ_LT635475\|CRISPRCasFinder	1340698-1340729	32	MT889387	Arthrobacter phage DanielleIgnace, complete genome	18017-18048	9	0.719
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	483662-483693	9	0.719
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	MN694201	Marine virus AFVG_250M801, complete genome	32566-32597	9	0.719
NZ_LT635475_2	2.9\|1341188\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341188-1341219	32	MN694455	Marine virus AFVG_250M805, complete genome	32180-32211	9	0.719
NZ_LT635475_2	2.11\|1341311\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341311-1341342	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	367272-367303	9	0.719
NZ_LT635475_2	2.12\|1341372\|32\|NZ_LT635475\|CRISPRCasFinder,PILER-CR	1341372-1341403	32	JN638751	Bacillus phage G, complete genome	35090-35121	9	0.719
NZ_LT635475_2	2.24\|1341371\|33\|NZ_LT635475\|CRT	1341371-1341403	33	CP046513	Bacillus cereus strain JHU plasmid p2, complete sequence	237113-237145	9	0.727
NZ_LT635475_2	2.4\|1340881\|32\|NZ_LT635475\|CRISPRCasFinder	1340881-1340912	32	NC_041916	Vibrio phage pTD1 DNA, complete genome	118344-118375	10	0.688
NZ_LT635475_2	2.21\|1341187\|33\|NZ_LT635475\|CRT	1341187-1341219	33	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	483662-483694	10	0.697

1. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to HQ906663 (Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA2, complete sequence) position: , mismatch: 6, identity: 0.812

gagctttaa-atcaaaggaggaaattatgaaac	CRISPR spacer
-ttctgtaatatcaaaggaggaaattaaggaac	Protospacer
   ** *** ***************** *.***

2. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to LC425526 (Uncultured phage DNA, contig: NODE982) position: , mismatch: 6, identity: 0.812

gaattacaaaaaatcaataaagagat---tccaaa	CRISPR spacer
gaattacaaaaaatgattaaagagatcgatct---	Protospacer
************** * *********   **.

3. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP018745 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid p_lp54_linear) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

4. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

5. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP028862 (Borreliella garinii strain 20047 plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

6. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

7. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

8. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

9. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

10. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

11. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

12. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

13. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

14. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.812

----gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cagagaat----aaaaatgaataaagagataccaaa	Protospacer
    ****    ****** *********** *****

15. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to JN564907 (Burkholderia phage AH2, complete genome) position: , mismatch: 6, identity: 0.818

cgacgaa-caggacgagaacacggagctggccaa	CRISPR spacer
-gccgggccaggacgagaacacgaagccggccaa	Protospacer
 * **.. ***************.***.******

16. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to JN564907 (Burkholderia phage AH2, complete genome) position: , mismatch: 7, identity: 0.781

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
ccgggccaggacgagaacacgaagccggccaa	Protospacer
   *. ***************.***.******

17. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 7, identity: 0.781

gagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
gatacataaatcaaaggaggaaaatatcaaat	Protospacer
**  . ***************** *** ***.

18. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to KY303907 (Enterococcus phage EF-P29, complete genome) position: , mismatch: 7, identity: 0.781

gagcttt---aaatcaaaggaggaaattatgaaac	CRISPR spacer
---ctatagaaaatcacaggaggatattatgaaag	Protospacer
   ** *   ****** ******* *********

19. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to MK570225 (Enterococcus phage vB_EfaS_PHB08, complete genome) position: , mismatch: 7, identity: 0.781

gagcttt---aaatcaaaggaggaaattatgaaac	CRISPR spacer
---ctatagaaaatcacaggaggatattatgaaag	Protospacer
   ** *   ****** ******* *********

20. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 7, identity: 0.781

gagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
gggtgtcgaaacaaaggaggaaatcatgaaac	Protospacer
*.*. *..** *************.*******

21. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP045269 (Bacillus megaterium strain FDU301 plasmid pFDU301G, complete sequence) position: , mismatch: 7, identity: 0.781

gaattacaaaaaatcaat--aaagagattccaaa	CRISPR spacer
gtattacagaaaatcaatagagagagattctg--	Protospacer
* ******.*********  *.********..

22. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to LC425526 (Uncultured phage DNA, contig: NODE982) position: , mismatch: 7, identity: 0.788

cgaattacaaaaaatcaataaagagat---tccaaa	CRISPR spacer
tgaattacaaaaaatgattaaagagatcgatct---	Protospacer
.************** * *********   **.

23. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP012385 (Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

24. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

25. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

26. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP028862 (Borreliella garinii strain 20047 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

27. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

28. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

29. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

30. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

31. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP018745 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid p_lp54_linear) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

32. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP012367 (Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

33. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

34. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

35. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

36. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

37. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

38. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

39. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

40. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

41. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

42. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

43. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

44. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

45. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

46. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 7, identity: 0.788

-cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcaaagt-taaaaaattaataaagagtttccaat	Protospacer
 *.** * .*******.********* ******

47. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.788

----cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
acagagaat----aaaaatgaataaagagataccaaa	Protospacer
     ****    ****** *********** *****

48. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP045332 (Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gacgaacaggacgataacaaggaggaacagaa	Protospacer
************** **** ****  .   **

49. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP039915 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gacgaacaggacgataacaaggaggaacagaa	Protospacer
************** **** ****  .   **

50. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP024589 (Roseomonas sp. FDAARGOS_362 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gacgaacaggacgataacaaggaggaacagaa	Protospacer
************** **** ****  .   **

51. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP045348 (Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gacgaacaggacgataacaaggaggaacagaa	Protospacer
************** **** ****  .   **

52. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP045337 (Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gacgaacaggacgataacaaggaggaacagaa	Protospacer
************** **** ****  .   **

53. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gtcgaacaggaccagaacacgaagctctaccg	Protospacer
* ********** ********.****   * .

54. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP043045 (Gluconobacter thailandicus strain HD924 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaaca--ggacgagaacacggagctggccaa	CRISPR spacer
--cagacggtggacgagaacacggtgctggtcat	Protospacer
  *..**.  ************** *****.**

55. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 8, identity: 0.75

gacgaaca--ggacgagaacacggagctggccaa	CRISPR spacer
--cagacggtggacgagaacacggtgctggtcat	Protospacer
  *..**.  ************** *****.**

56. spacer 2.4|1340881|32|NZ_LT635475|CRISPRCasFinder matches to MN693083 (Marine virus AFVG_25M55, complete genome) position: , mismatch: 8, identity: 0.75

gtcagtaaatgtcagtaaatattgtggtataa	CRISPR spacer
atcagtaagtggcagtaaatattgggcagaaa	Protospacer
.*******.** ************ *  . **

57. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP012367 (Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

58. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP012385 (Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

59. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

60. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

61. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

62. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

63. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gcattagaaaaaatcactaaagagatagcctg	Protospacer
* **** ********* *********  *  .

64. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

65. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

66. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

67. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

68. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

69. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

70. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
caaagttaaaaaattaataaagagtttccaat	Protospacer
 **   .*******.********* ******

71. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to KX119188 (Helicobacter phage FrB41M, complete genome) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gaattagaaaaactcaataaagatagcgaaat	Protospacer
****** ***** ********** * .  **

72. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to KX119192 (Helicobacter phage Pt1918U, complete genome) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gaattagaaaaactcaataaagatagcgaaat	Protospacer
****** ***** ********** * .  **

73. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to KX119191 (Helicobacter phage Pt4497U, complete genome) position: , mismatch: 8, identity: 0.75

gaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
gaattagaaaaactcaataaagatagcgaaat	Protospacer
****** ***** ********** * .  **

74. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to NZ_CP045332 (Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgaacaggacgagaacacggagctggccaa	CRISPR spacer
cgacgaacaggacgataacaaggaggaacagaa	Protospacer
*************** **** ****  .   **

75. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to NZ_CP039915 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgaacaggacgagaacacggagctggccaa	CRISPR spacer
cgacgaacaggacgataacaaggaggaacagaa	Protospacer
*************** **** ****  .   **

76. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to NZ_CP024589 (Roseomonas sp. FDAARGOS_362 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgaacaggacgagaacacggagctggccaa	CRISPR spacer
cgacgaacaggacgataacaaggaggaacagaa	Protospacer
*************** **** ****  .   **

77. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to NZ_CP045348 (Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgaacaggacgagaacacggagctggccaa	CRISPR spacer
cgacgaacaggacgataacaaggaggaacagaa	Protospacer
*************** **** ****  .   **

78. spacer 2.13|1340697|33|NZ_LT635475|CRT matches to NZ_CP045337 (Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgaacaggacgagaacacggagctggccaa	CRISPR spacer
cgacgaacaggacgataacaaggaggaacagaa	Protospacer
*************** **** ****  .   **

79. spacer 2.21|1341187|33|NZ_LT635475|CRT matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 8, identity: 0.758

cgagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
agatacataaatcaaaggaggaaaatatcaaat	Protospacer
 **  . ***************** *** ***.

80. spacer 2.21|1341187|33|NZ_LT635475|CRT matches to KY303907 (Enterococcus phage EF-P29, complete genome) position: , mismatch: 8, identity: 0.758

cgagcttt---aaatcaaaggaggaaattatgaaac	CRISPR spacer
---actatagaaaatcacaggaggatattatgaaag	Protospacer
   .** *   ****** ******* *********

81. spacer 2.21|1341187|33|NZ_LT635475|CRT matches to MK570225 (Enterococcus phage vB_EfaS_PHB08, complete genome) position: , mismatch: 8, identity: 0.758

cgagcttt---aaatcaaaggaggaaattatgaaac	CRISPR spacer
---actatagaaaatcacaggaggatattatgaaag	Protospacer
   .** *   ****** ******* *********

82. spacer 2.21|1341187|33|NZ_LT635475|CRT matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 8, identity: 0.758

cgagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
ggggtgtcgaaacaaaggaggaaatcatgaaac	Protospacer
 *.*. *..** *************.*******

83. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to KX119188 (Helicobacter phage FrB41M, complete genome) position: , mismatch: 8, identity: 0.758

cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cgaattagaaaaactcaataaagatagcgaaat	Protospacer
******* ***** ********** * .  **

84. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to KX119192 (Helicobacter phage Pt1918U, complete genome) position: , mismatch: 8, identity: 0.758

cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cgaattagaaaaactcaataaagatagcgaaat	Protospacer
******* ***** ********** * .  **

85. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to KX119191 (Helicobacter phage Pt4497U, complete genome) position: , mismatch: 8, identity: 0.758

cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
cgaattagaaaaactcaataaagatagcgaaat	Protospacer
******* ***** ********** * .  **

86. spacer 2.1|1340698|32|NZ_LT635475|CRISPRCasFinder matches to MT889387 (Arthrobacter phage DanielleIgnace, complete genome) position: , mismatch: 9, identity: 0.719

gacgaacaggacgagaacacggagctggccaa	CRISPR spacer
gccatgaaggacgcgaagacggagctggccgg	Protospacer
* *. . ****** *** ************..

87. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 9, identity: 0.719

gagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
tcaatagaaaacaaaggaggaacttatgaaaa	Protospacer
  . *  *** *********** ********

88. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to MN694201 (Marine virus AFVG_250M801, complete genome) position: , mismatch: 9, identity: 0.719

gagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
ggctaataaaccaaaggagaaaattatgacag	Protospacer
*. .  ****.********.********* *

89. spacer 2.9|1341188|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to MN694455 (Marine virus AFVG_250M805, complete genome) position: , mismatch: 9, identity: 0.719

gagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
ggctaataaaccaaaggagaaaattatgacag	Protospacer
*. .  ****.********.********* *

90. spacer 2.11|1341311|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttggtcgactgttgagttctcaatcatgatta	CRISPR spacer
tcggccgattgttgagttctcaatcgaacctt	Protospacer
*.**.***.****************. . .*

91. spacer 2.12|1341372|32|NZ_LT635475|CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.719

gaattacaaaaaatcaataaagag---attccaaa	CRISPR spacer
ttattacaaaaaataaaaaaagagacaatttt---	Protospacer
  ************ ** ******   ***..

92. spacer 2.24|1341371|33|NZ_LT635475|CRT matches to CP046513 (Bacillus cereus strain JHU plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.727

cgaattacaaaaaatcaataaagagattccaaa	CRISPR spacer
agcattagaaaaaatcactaaagagatagcctg	Protospacer
 * **** ********* *********  *  .

93. spacer 2.4|1340881|32|NZ_LT635475|CRISPRCasFinder matches to NC_041916 (Vibrio phage pTD1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtaaatgtcagtaaatattgtggtataa	CRISPR spacer
acatgaaaatgtcagtaagtagtgtggtaatt	Protospacer
..  * ************.** *******

94. spacer 2.21|1341187|33|NZ_LT635475|CRT matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 10, identity: 0.697

cgagctttaaatcaaaggaggaaattatgaaac	CRISPR spacer
gtcaatagaaaacaaaggaggaacttatgaaaa	Protospacer
   . *  *** *********** ********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9652 : 23308

Streptococcus_phage(30.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075573417.1\|9652_11113_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	E3ST28	Prochlorococcus_phage	4.5e-76	38.4
WP_075573418.1\|11158_12058_+	YitT family protein	M1Q1P6	Streptococcus_phage	2.9e-25	32.8
WP_075573419.1\|12116_13091_+	hypothetical protein	NA	NA	NA	NA
WP_075573420.1\|13269_13749_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.6e-25	45.2
WP_075573421.1\|13749_15090_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	8.2e-48	31.5
WP_075573422.1\|15100_16132_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	1.6e-64	41.3
WP_075573423.1\|16110_16671_+	hypothetical protein	M4QRX9	Synechococcus_phage	4.2e-22	35.0
WP_075573424.1\|16667_18197_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.4e-66	46.4
WP_075573425.1\|18216_19515_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.6e-43	29.5
WP_075573426.1\|19671_20118_+	hypothetical protein	NA	NA	NA	NA
WP_075573427.1\|20114_21431_-	hypothetical protein	NA	NA	NA	NA
WP_075573428.1\|21430_22303_-	YitT family protein	M1Q1P6	Streptococcus_phage	9.1e-24	31.7
WP_075573429.1\|22435_23308_-	YitT family protein	M1Q1P6	Streptococcus_phage	1.3e-25	29.2

DBSCAN-SWA_2

1270862 : 1279691

Clostridium_phage(50.0%)

integrase

attL 1263643:1263657|attR 1282391:1282405

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1263643:1263657	attL	NA	NA	NA	NA
WP_075574446.1\|1270862_1272392_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.1e-19	31.9
WP_075574447.1\|1272572_1273004_-	helix-turn-helix transcriptional regulator	I2E8Y1	Clostridium_phage	1.6e-05	48.3
WP_002839721.1\|1273265_1273460_+	hypothetical protein	A0A0A8WI91	Clostridium_phage	2.6e-08	47.3
WP_075574448.1\|1273461_1274586_+\|integrase	site-specific integrase	A0A0A8WF08	Clostridium_phage	3.1e-85	46.5
WP_075574449.1\|1274578_1274941_+	hypothetical protein	NA	NA	NA	NA
WP_075574450.1\|1275058_1276522_+	virulence-associated protein E	A0A0K1LKN1	Staphylococcus_phage	9.6e-42	35.2
WP_039930920.1\|1276877_1277240_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004826786.1\|1277246_1277495_+	hypothetical protein	NA	NA	NA	NA
WP_075574873.1\|1277581_1277977_+	DUF4275 family protein	NA	NA	NA	NA
WP_019034270.1\|1277986_1279429_+	hypothetical protein	NA	NA	NA	NA
WP_004826783.1\|1279520_1279691_+	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	1.5e-07	53.8
1282391:1282405	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT635475

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection