Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_LT635472 | Helicobacter pylori isolate HE170/09 chromosome I | 1 crisprs | cas14k,cas14j,cas2,DEDDh,csx1 | 0 | 0 | 1 | 0 |
1. NZ_LT635472
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_LT635472_1 | 586381-586460 | TypeV |
NA
Consensus repeat of NZ_LT635472_1
|
1 spacers
spacers of NZ_LT635472_1
>1.1|586404|34|NZ_LT635472|CRISPRCasFinder AATAAAAAGAAAACAGGACAAGTAGCTAGCCCTG |
cas14k |
CRISPR arrays and Neighbor proteins around NZ_LT635472_1
The CRISPR arrays of NZ_LT635472_1 >merge|NZ_LT635472|1|586381-586460|CRISPRCasFinder GAGAACCCATTTATGCTCAAGTTAATAAAAAGAAAACAGGACAAGTAGCTAGCCCTGAAGAACCCATTTATGCTCAAGTT >NZ_LT635472|1|1|586381-586460|CRISPRCasFinder GAGAACCCATTTATGCTCAAGTT AATAAAAAGAAAACAGGACAAGTAGCTAGCCCTG AAGAACCCATTTATGCTCAAGTT
>NZ_LT635472.1|WP_000428893.1|583054_583282_-|hypothetical-protein MENKSIGQIFKESLKKSFFSGLWSCLKWSFILTLISLGLFLLVFRFQPETIKKYIKDPKDLQFYDDLRKKNGWDK >NZ_LT635472.1|WP_089086786.1|582563_582911_-|sodium:calcium-antiporter MKFFTRITDSYKKVVVTLGLAITANPLMAVNSPATGITETKTLVVQIISVLAIVGGCALGVKGIADIWKISDDIKRGQATVFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS >NZ_LT635472.1|WP_089087379.1|581938_582562_-|cag-pathogenicity-island-type-IV-secretion-system-protein-CagD MINNNSNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEVLEKEKNTPNGPVYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL >NZ_LT635472.1|WP_000906664.1|579421_579640_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA >NZ_LT635472.1|WP_001114660.1|579234_579429_-|type-II-toxin-antitoxin-system-HicA-family-toxin MPELPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENILK >NZ_LT635472.1|WP_089086659.1|578605_579238_-|IS607-family-transposase MKSKEVLKILKISRVTLWKYVKSGKIRVKQEPNGYYIYNDSDVYSLAGIEDGRLNVVYARVSTQKQKQDLQNQIENCISFINAKGISVDSIYSDIKSGMSLDRKGFMDLLNAVMAFKIKAVYISYKDRLARLSYELVEKLFSDYGTKIVIINQCESISLEQELFEDIMQTIHSFSMKMYSKRRIAKKLLLESKVNPALLKSLNGETDDLD >NZ_LT635472.1|WP_024117745.1|577389_578619_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB MTLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKESQRDYKALPAQSAQQVLMLLSQNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGVLTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQVRLIPKTTCFIVEVVYEQTTHKLPQTHGIGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTSNKRFWTKRLGKLALWRECKVNDFMHKASAYVVGHCLKKGISTIVIGKNDGWKQELKLGKRTNQNFTNIPYESFIEKLAYKCALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKRGLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVFTPVKISLAF >NZ_LT635472.1|WP_000814269.1|575772_576579_-|type-IV-secretion-system-chaperone-CagF MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD >NZ_LT635472.1|WP_000855886.1|575289_575718_-|cag-pathogenicity-island-type-IV-secretion-system-translocation-protein-CagG MKTNFYKIKLLFAWCLIIGMFNAPLNADQNTDIKDISPEDMALNSVGLVSRDQLKIEIPKETLEQKVAILNDYNDKNVNIKFDDISLGSFQPNDNLGINAMWGIQNLLMSQMMSDYGPNNSFMYGYAPTYSDSSFLPPILGY >NZ_LT635472.1|WP_025449159.1|574161_575274_-|cag-pathogenicity-island-type-IV-secretion-system-translocation-protein-CagH MAGTQAIYESSSAGFLSQVSSIISSTSGVAGPFAGIVAGAMTAAIIPIVVGFTNPQMTAIMTQYNQSIAEAVSVPMKAANQQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYATNQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAKYQALATNALTSGVNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILGQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK >NZ_LT635472.1|WP_089086788.1|587526_587901_+|hypothetical-protein MIELLEQIDRALNQRKIRKTIGIITPYDAQKRRLRSEVEKCGFKNFDEIKIDTVDAFQGEEADIIIYSTVKTCGNLSFLLDSKRLNVAISRAKENLIFVGKKSFFENLRSDKNNIFSAILQVCR >NZ_LT635472.1|WP_089086789.1|588029_588797_-|glutamate-racemase MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILPEVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACAFPKVEFHASGDVIWLEKQAKEWLKL >NZ_LT635472.1|WP_001004721.1|588836_590153_-|transcription-termination-factor-Rho MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEILKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVTGQVRSPKDQEKYYALLKVEAINYSPSDEIRNRPLFDNLTPLFPDEQIKLEYESTKVTGRMLDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQRSVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSSGKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYSKMQQTKDNEEFLKLMNEK >NZ_LT635472.1|WP_000715278.1|590417_590621_+|50S-ribosomal-protein-L31 MKKGIHPEYIPCKVTCVTSGKEIEVLSTKPEMRIDISSFCHPFYTGSDKIADTAGRVEKFKQRYNLK >NZ_LT635472.1|WP_089086790.1|590644_591514_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIAAKKREFIAFHSHNDQEFLNQIEPSFFDKEIAVMSDAGMPSLSDPGMSLAAYALKHNIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLRIIKILNALAYLEEKTPVVFYESPHRLLETLRDLNDLAQGMHLFAAKELTKLHQQYYLGEISQIMTQLQKSNIQGEWVLVLLNEKKIEPSMGLSALLELDLPPKIKAKMEAAMTQKNAKELYCQRLLEEKKQCD >NZ_LT635472.1|WP_089086791.1|591527_592211_+|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB MQAVVYGKQVITHLLNSHHEKLQEIYLSKEIDKKLFFALKKACPNIIKVDNKKAQSLAKGGNHQGVLAKVELPLAASLKEIKKAQKLLVLCGITDVGNIGGIFRSAYCLGMDGVILDFAREFAYEGIVRSSLGLMYDLPFSVMPNTLDLINELKTSGFLCLGASMQGSSQAENLSLKKCALFLGSEHEGLSKKILAKMDAILSVKMRRDFDSLNVSVAAGILMDKIN >NZ_LT635472.1|WP_089086792.1|592223_593189_+|sialidase MEQNKKSLENLDLSDVQNISKDISGAALEELSLKNLDKNLQILKEVGATEICKATKIASKNIHSILEKRYESLSRVHARGFIQILEREYKIDLSAWVKEFDKVCVFKEGVGEEQKQETSPEETAKKLLKVELDYSINQANTSLSKKSSKWKPFVIVLGVVVIILVVVIIQNSSSLKEEREQESAIKSGTKNSSFNEVSPTEEKKLEPTPKLEEKPKEQDKQGKEAIKENPNTIYIIPKRDIWVEVIDLDEKKNSFQKVFKKSYPLEAKNHRLLLRFGHGHLILKNNHQEQDYNDSKTRRFLYDPNKGLTLINEAQYKVLQQ >NZ_LT635472.1|WP_089086793.1|593185_594007_+|hypothetical-protein MNKLFLAFIVGGMLLNADALNDKIENLMGERSYHMNKLFLERLFKNRKDFYEMGRLDSLKLLNTLKENGLLSFNFDKPSVLKITFKASSNPLEFAKSINNSLNMMGYSYVLPIKMQSSSGENVFSYELKTEYVLDPNILIETMKRHGFDFMDIRRVSLKEWEYDFALQKIKLPNARALVLSSDPVEFKEASGKYWLSVNQNAYLKISSNNPLWQPKIIFYDENLKIIQIIAKENRQQEIALNLLNGVRFIHITDAKNPIILKNGISVVFDAMP >NZ_LT635472.1|WP_089086794.1|594077_594515_-|hypothetical-protein MFIHEKIKSRFSRNWSLRNRGRHFASSSVYFFSLLVITAVNRSSAVAWLLMPEHLIGWFLISFSGEFVADMAFGKKSKIFKTRFGISIVSGVSLLLGALPAHLFFVWFGFINWWAVFFIEAGADLLVGCVIQKIFFGKYWVDRYY >NZ_LT635472.1|WP_001029404.1|594991_595930_-|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha MAIYLDFENHIKEIQNEIELALIRGDEDAKEILEKRLDKEVKTIYSNLTDFQKLQLARHPDRPYAMDYIDLILKDKYEVFGDRHYNDDKAIVCFIGKIDNVPVVVIGEEKGRGTKNKLLRNFGMPNPCGYRKALKMAKFAEKFNLPILMLVDTAGAYPGIGAEERGQSEAIAKNLQEFASLKVPTISVIIGEGGSGGALAIAVADKLAMMEYSIFSVISPEGCAAILWDDPSKTEVAIKAMKITPRDLKEAGLIDDIILEPSKGAHRDKFSAANTIKEYFLDALRTIQQDPHFLDNRYQKLMSLGSFVEGMN |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
1424666 : 1435546
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_LT635472|1424666:1435546|DBSCAN-SWA AATGGGTTTTGAAAAAAGCATTTTAGACAATTTGAACGGAGCGCAAAAAATCGCCGCAAGCCACATTCAAGGGCCTTTATTGATTTTAGCGGGAGCTGGGAGCGGTAAGACTAAGACTTTAACGAGCCGTTTAGCGTATTTGATTGGCGCTTGTGGCGTGCCTAGCGAGAACACTTTAACGCTCACTTTCACCAATAAAGCGAGTAAGGAAATGCAAGAAAGGGCTTTGAAATTGTTGGAAAACCAAGCCCTTATCCCCCCCTTGCTTTGCACTTTCCATCGTTTTGGTTTGCTGTTTTTAAGGCAACACATGAGCCTTTTAAAAAGGGCGTGCGATTTTTCGGTGTTAGATAGCGATGAAGTCAAAACGCTGTGCAAGCAGCTCAAAATTTCAAACTTCAGGGCGAGCATTTCTCAAATCAAAAACGGCATGATGGATTTGAGCGTGCAAGATAGCGAATGTTATAAAGCGTATGAACTTTATCAAAACGCGCTCAAAAAAGACAATTTAGTGGATTTTGACGATCTGCTTTATTTGAGCCTTAAGATTTTACAAGATAATGAAAAACTCGCCAAAGAGACTAGCGAACGCTACCATTACATTATGGTAGATGAATACCAAGACACGAACGCCCTGCAACTAGAATTTTTAAAACAATTGAGTTGCGCGCACCATAATTTGTGCGTGGTGGGCGATGACGATCAGAGCATTTATGGTTTTAGGGGGGCGGATATTTCTAACATTTTAAATTTTTCCAAGCATTTTAAAGGGGCTAAAATAGTGAAATTAGAGACCAACTACCGCTCCAGCGCTGAAATTTTAGCGTGCGCTAATTCCCTTATCAGCCATAACCAACACCGCCACATTAAAACGCTTCAAAGTTTCAAAGGCTCGCATAAAAGCGTGGTTTGTAAGGAATATTTAACGCAAAAAGAAGAGAGCCTGGATGTGGCTTATCAAATCAAAGCCCTTTTAAAGAAGGGCGAAAATTTAGAAAATATCGCTATTTTGTATCGTTTAAACGGGCTTAGCCGCAGCATTGAAGAGAGCTTGAACGCTTTGAATATCCCTTATAGGCTCATTGGAGCGGTGAGTTTCTATGAAAGAGCTGAGGTTAAAGACGCTTTGGCACTCATGCATGTGGTGGCGAAAAAAGACGATCGCTTTTTTATTAAGCGCGTTTTAAACAAGCCCCCAAGAGGCCTTGGCAAGATCACTCAAGAATGGATTTTTTCTCTTTTAGATGAAGAGAGTTTGGATTTAGAAGAAGCGCTAAAAATTGGGGCGTTTAAAGACAAACTAAACCCTAAAAACGAATACGCTTTGAATAAATTCACCGCTATGATAGGGCGTTTGAGGGAGGCTTTTGAAATTTCAGTAGAGAAGTTTTGCGAGCGGTTTTTAGAAGAAACTAACCTTTTAAAAAGCTATGAAAAAGAAGACAATTACGAAGAAAGAGAGGGCTTTATTAAAGAGCTTTTAAGTTTAGTGAAAGAGCATTTTAAAACTAACCCCACGCATTCTTTGCTGGATTTTTTGAATGAAAGCGTGCTAGATGTCCATAATACAGAAAACGCGCAAAAAGTGAGCTGCATGAGCGTGCATATGAGTAAGGGGTTAGAGTTTAAGCATGTGTTTGTGATTGGGTTAGAAGAGGGGTTTTTCCCGCATAGGGGGTTCAATCAAGAAAGCGATTTGGAAGAAGAAAGGCGCTTGGCTTACGTGGCGATCACTAGGGCTAAAGAAGGATTGCAGCTCTCTTATGTCAAAGAGCGTTCGTATTTTGGGAGGAAAATTTCTTGCTCGCCCTCTGTGTTTTTAGAAGAAGCCCAGTTGCTCAAAAGCGATCAAACCCCTAAACAGGATCACCCAAAAGATACGCCCATTAAAGTGGGGGATTTGATCAAACATAAGATTTTTGGCACCGGTAGGGTTTTAGGCGTGGAAAAGGGCTTGAGCGGTTTGTGTTTGAAAATCAATTGCGGAGGGAATGTCTATGATAAAATCTCAGAAAAATTTGTAGAAAAAGTGGATAACGAGTTTTGAAAATTTTAACCCTTTTTTTGATAGGTTTAAACGCGCTCTTCGCCCTAGATTTAAACACGCTTAAAACAGGGATCAAAGAAACTTACCTCAAAGAATACCAAGACTTAAAATTGGAAATTGAAACAATTAATTTAGAAATCCCGGAGCGTTTTTCTCACGCTTCCATTTTAAGCTATGAATTGAGCGCTTCTAACAAGCTTAAAAAAGATGGGGTTGTGTTTTTAAAATTGGAAAATGAGCCTAATTTACGCCTACCGGTGCGTTATAGCGTGATAGGCAGCATGCAGGCTTTTAAAAGCGTTAGCGCGATTAAAAAAGACGAGAACATCACCGCTAACAACACCAAAAAAGAGCGCGTTTCGTTTGGCGCGCTTTCTAACCCCTTGTTAGAGGGCGCGATTGATAAAGTGAGCGCGAAACATTTTATCCCCCCTGACACGCTTTTAAGCACAGATAAAACCCAAGCTTTAATCATCGTGCGTAAAAACGACATCATCACCGGGGTGTATGAAGAGGGGCAAATCAGCATAGAAATAAGCCTAAAAGCCCTAGAAAATGGTGCACTTAATCAAATCATTCAAGCGAAAAATTTAGAAAGCAATAAAATCTTAAAAGCGAAAGTGTTGAGCAGCTCTAAGGCGCAAATCTTATAAAGGATATTCATGAAATTAGTTTTAGGCATCAGCGGGGCGAGCGGGATACCCCTAGCCTTGCGGTTTTTAGAGAAATTACCCAAAGAAATTGAAGTTTTTGTCGTGGCGTCTAAAAACGCGCATGTCGTGGCGTTAGAAGAATCGAATATCAATCTTAAAAACGCCATGAAAGACTTACGGCCTAGCGCGACTTTTTTTAACGAGCAAGACATCCATGCGAGCATCGCTTCAGGGAGCTATGGTATCCATAAAATGGCGATCATCCCGGCGAGCATGGACATGGTGGCTAAAATCGCGCATGGCTTTGGGGGGGATTTGATTTCTAGGAGTGCCTCTGTGATGCTTAAAGAAAAGCGCCCCTTACTCATTGCCCCTAGAGAAATGCCTTTAAGCGCTATCATGTTAGAAAATTTGCTCAAACTCGCCCATTCTAATGCGATCATCGCACCGCCGATGATGACTTACTACACCCAGAGCAAGACTTTAGAAGCGATGCAAGATTTTTTAGTGGGGAAGTGGTTTGACAGCTTGGGAATAGAAAATGACTTATACCCACGATGGGGAATGAACTGATGCAAAAAATCGGCATTTACCCGGGCACTTTTGATCCGGTCACTAACGGGCATATAGACATCATCCACCGCTCCAGCGAATTGTTTGAAAAGCTCATTGTGGCTGTGGCGCACTCAAGTGCTAAAAACCCCATGTTTAGTTTAGATGAGCGCTTAAAAATGATGCAACTGGCCACTACAAGTTTTACAAATGTAGAATGCGTTGCGTTTGAAGGGCTATTAGCCAACCTGGCTAAAGAATACCATTGTAAGGTGTTAGTTAGGGGCTTAAGGGTGGTGAGCGATTTTGAATACGAATTGCAAATGGGCTATGCGAACAAATCCTTAAACCACGAATTAGAAACCTTGTATTTCATGCCCACTTTGCAAAACGCTTTCATCAGCTCTTCTATCGTGCGATCCATTATCGCGCATAAGGGCGATGCGAGCCATTTAGTGCCTAAAGAAATTTATCCTTTGATTTCAAAGGTTTAAAATGTATGTGGCGTTAGAAGGCGTTGATGGCGCGGGCAAAAGCACTCAAGTAGAATTATTAAAAAACAGGTTTAAAAACGCCCTTTTTACCAAAGAGCCAGGGGGGACGAGAATGGGCGAAAGTTTAAGATATATCGCTTTAAATGAAAATATCAGCGAATTAGCCCGAGCGTTTTTATTTTTAAGCGATAGGGCTGAGCATACAGAAAGCGTGATCAAACCGGCTTTAAAAGAAAAAAAGCTCATCATTAGCGACAGGAGTTTGATTTCTGGCATGGCTTATAGCGAGTTTTCAAGCTTGGAATTAAACCTGCTTGCCACTCAAAGCATCTTGCCTGCAAAAATCGTTCTTTTACTCATAGATAAAGAGGGCTTAAAACAGCGCTTAAGCCTTAAAAGTTTAGACAAAATAGAAAACCAAGGCACAGAGAAATTACTCACCATCCAGCAAAAGCTCAAAGCTCATGCTTATGCGTTAAAAGAAAAATTCGGGTGCGAAGTTTTGGAATTAAACGCTAAAGAAAGCGTTAAAAACTTACACGAACAAATCACCGCCTTTATAGAATGCGCTGTTTAACCTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCCAATTGCCTAAACGATCTGCCCTTAAGCTTAAAAGTGAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACGCGCTGATTGGTTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTAAGGATTTTACAAGAAAAAGGCTTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGGCTTTTGTCAAGGCAATTTAAAACCCACTTATGGGACTTTAAGAGCCACAAATACTATTTCATATGCCGGGAAAAGCCTGGAATTTCGCGCTAACCACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTGTTAGATGACATTATCACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTGCAGCGCGGATGAATGAGTTATAATTTTGTTTTTTAAAAAAGGATAAACCCATGAATAAAGTTCCATCCATTGAGCCTCAAATCGCTGATAAGTTCAACAACGAGTTAAGAAATTATGGACTAGACTATAAACTAGAGCAAGAAAGCCTGAATACAGAAATTGATGAAGCTTTAAAAAATTACGCTTCTAAAAGTGGGGGTTTAGGGGGTAACCGCCCTGATGTGAAACTTTTATTAAACACACAAGACCCTAACAGAAGAATCCCTATTTTAATAGAATACAAAGGATTAAAAGATAAGCTCATTAAATTAGACAAAAACAAACTGGTAGAAAACTTTAAAAACCATGAGCCTCATTATAAAAACATTAGAGAATACGCCCTAAATGGGGCTTTGCATTACGCTAATGCGATTTTACACCACACGGACTACACTGAATGCATCGCCATAGGCATCACAGGCTATAAAGACAATAAAGGCGGCATATGCTCTCAAATCGCTGTTTATTATGTGAATAAAAGCAATTTGGGCATGGGGATAGATGTCTCAAAAGGCGAGCAAGCTTATAGTGATCTATCCTTTTTAAGCCGTAAGCATTTTAACGACTTTATTAAACGAGTAGACACCCTTTCTTTAAGCGATGAAGATTTAGAGCGCATTAGAGAAAAGAAAAACCAAGAAATAGAAGACTGCTTGACTTGTCTCAATAATGATATTTATAAAAAAGACAAGCTTTCTTTAAGCGAAGAAGATCGTTTGTATTTAGTGGTTGCGAGCATTATCGCTAATTTAGGCATCTCTAATTTGGTAGCCCCCCTAAAAAAAGAAGATTTAAAATCTAGCGATGAGGTCCATCAAAGAGATGGCGACATCATGCTCAGAAAAATCCAATCCTTTTTAGAGTATAAGCATTTGCCCCAAGAAAAAAAGCAAAGCATCATTTCTTTATTAGAGCCTTTATTAAAAAACGAAAACGACAACAAAGCCATTAATGGCGAAAGCCGTTTGAAGCGCTGTTTTAGTGAAATCGTGGATAATTTGGGCATTTATTATAAAATCGGTCTTAGCACGGATTTTACCGGTAAATTGTTCAATGAAATGTATCGCTGGCTGGGTTTCACGCAAGACCAATTAAACGATGTGGTGCTCACGCCTCCTTATGTCGCCACGCTTTTAGCCAGACTCTCCAAAGTCAATAAGGATAGTTTCGTGTGGGATTTTGCTACCGGAAGCGCTGGGTTATTAGTCGCAAGCATGAATTTGATGATAGAAGACGCTAAAAAGCGTATCACTAGCCCAAAGGAATTAGAGCAAAAAATCGCCCACATTAAAGCCAAGCAACTTTTAGGCATAGAAAAATTACAAAAAATCTATATTCTAGCGGTGTTAAACATGATTTTAATGGGCGATGGGAGCAGTCAAATCTTAAACCAAGACAGCTTGAGCGGTTTTGATGGCAAAGTCAATAATAAAGAATTTAAAGCTAACGCTTTTGTTTTAAACCCGCCTTATTCCGCTAGCGGTAATGGCATGGTGTTTGTGGAGCAGGCTTTAGAAAAAATGCAAAGCGGTTATGCGAGCGTGATCATCCAATCAAGCGCCGGCAGTGGCAAAGCCAAAGAATACAATGTAAGGATTTTGGAAAAACACACGCTTTTAGCGAGCATTAAAATGCCTTTAGATTTATTCATCGGCAAAAGCAGCGTTCAAACCCATATCTATGTTTTTAGGGTCAATGAAAAGCATGACGCTAAGCAAAAGGTGAAATTTATTAATTTCAGTAACGACGGCTACGCTAGAGCGAATCGCAAAAAAGCCAAAGCCAGCCACAATTTAAAAGACACGCATAACGCCAAAGAGCGCTACAACGAAGTCGTGGATTTAGTCCATATTGGCCAATCATGTTTGAAATTTTTAAGCGAAGATGACTACTATGAAAACACCATAGACCCCAAAAACGGGAGCGATTGGAACCAAAATAAACCCACCGACACCAAACCCGAATTAGAGGATTTTAAAAGAACGATAGCTGATTACCTTTCTTATGAAGTGGGCTTGATTTTAAAAAATCAAACGCCCCCAAAGTGATTGGCCCCCTTAGTAGCCAACTCAACGCTATTAAGTGGGGCGAGTTCAGATTAGGGGATTTGTTTGAAGCGAGTAACGGCGATTTTGACATCCAAAAACGCCATATCAATCATAAGGGCGAATTTGTCATCACCGCAGGGCTTAGCAATAATGGCGTTTTAGGGCAAAGCGATATAAAAGCAAAAGTTTTTGAAAGCCATACTATCACTATTGACATGTTTGGTTGCGCGTTTTATCGCAGTTTTCCTTATAAAATGGTAACACACGCTAGGGTATTTTCTCTCAAACCCAAATTTGAAATCAACCATAAAATCGGTTTGTTTTTATCCACGCTATTTTTTGGTTACCCTAAAAAATTCGGCTATGAAAACATGTGCTCATGGGTAAAAATTAAAAACGATAAGGTCATTCTACCCCTAAAACCCACCGCTAACACTCAAACCTTTGAGGATATTGATTTTCATTTCATGGAAAAATTCATAGCCGAACTTGAGGCTTATTTAAAAGTTACAGGGCTAGAAAACACCACCCTTTCTAGCGATGAAGAAAACGCCCTTAACGTTTTCAATGGCAACAATTCTGGGGGGGGTAATACCCCATGCGGCTTAACATGGCAACACTTCAAACTAGGGGATTTGTTTGAAATACGCCCCACAAAAGCCTATAACCTCACAAACCCTCATTTATTTGATAGTAACGCAAAAAATCCAGTCGTTACCAATTCTAGTTTGAACAATGGGATAAGCGGTTATTCTCCTTTAGAACCCACCGAAAAGGGCAATCAGATCACTTATAGCGATACCACGACTTCAGAGGGTATTTTTTATCAAAAAAGACCTTTTATAGGGTATTCGCATGTGCAAGGGCTATACCCTTTAAAATACCATGAGTTTTGGAATGAAAAAACCTTACTCTATATCGTTGTGGCTTTTAAAAAAGTAGCTTGTGGGCGTTTTGATTATGGTAATAAATTCAATCGTAAAATTGCTAGTGAAATGTCAATCATTCTCCCCACCAACCCACATGGCGGTATTGATTTCCATTTCATGCGCACCATCATCAACGCCCTAATGAAACAAACCATTCAAGGCGTGGTTCAATACTGCAGCGCTCAAATCCAGGCTACAAAAGAAATCATCAGCCAAGAAGCGCCCGTTCAAAAAGACTCGTTATTTTAAAAGGGGTTTTAAGCGCGCTCGCTTGTGTTACAATAAACTTAAAATTCGCTTGATTGAAGAGGGTTGAATAATGGAGCAGCCAGTCATTAAAGAAGGGACTTTAGCTTTAATTGATACTTTTGCGTATTTGTTTAGAAGCTATTACATGAGCGCTAAAACAAAACCTTTAACCAACGATAAGGGCTTTCCTACAGGGCTTTTAACGGGGCTTGTGGGCATGGTTAAAAAATTTTATAAGGATAAAAAAAACATGCCTTTTATCGTGTTCGCCCTAGAAAGCCAGACTAAAACTAAAAGAGCTGAAAAACTGGGCGAATACAAACAAAATCGTAAAGACGCCCCTAAAGAGATGCTTTTACAAATCCCTATCGCTTTAGAATGGTTGCAAAAAATGGGTTTTACTTGCGTGGAAATGAGCGGGTTTGAAGCCGATGACGTGATCGCTACTCTAGCCACGCTAAGCCCTTATAAAACGCGCATTTATTCTAAAGATAAGGATTTTAACCAGCTTTTGAGCGATAAAATCGCGCTTTTTGATGGCAAAACGGAGTTTTTGGCGAAGGATTGCGTGGAAAAATACGGGATTTTGCCGAGTCAATTCACGGATTATCAGGGCATTGTAGGGGATAGCAGCGATAATTACAAGGGGATTAAGGGCATTGGGAGCAAGAACGCTAAGGAATTGTTACAACAATTAGGGAGCTTGGAAAAAATCTATGAAAATTTAGACTTGGCGAAAAATTTACTCAGCCCTAAAATGTATCAAGCCCTTATACAAGACAAAGAGAGCGCGTTTTTAAGCAAAGAATTAGCCACTTTAGAAAGAGGGTGCATTAAAGAATTTGATTTTTTAAGTTGCGCTTTTCCTAGCGAAAACCCCCTATTGAAAATCAAAGACGAACTGAAAGAATATGGTTTTATTTCCACTTTAAGGGATTTAGAAAAATCCCCTTTAATTGTAGAAAACGCCCCCATATTAGACAGCGCCCCCGCCTTAGAAAACGCCCCTAAAAAATCGTGCATGATCGTTTTAGAAAGCGCTGAGCCTTTGAGCATGTTTTTAGAAAAATTAAAAAACCCTAACGCTAGGGTTTTTATGCGTTTGGTGCTAGATAAAGAAAAAAAAGTTCTAGCCCTAGCGTTTTTATTACAAGATCAAGGCTATTTTTTACCTTTAGAAGAGGCGTTATTTTCGCCCTTTTCTTTGGAGTTTTTGCAAAACGCTTTTTCTCAAATGTTACAGCATGCGCAAATCATTGGGCATGATTTAAAGCCTTTATTGAGCTTTTTAAAAGCCAAATATCAGGTGTCTTTAGAAAACATCCGCATCCAGGACACTCAAATTTTAGCGTTTTTAAAGAATCCGGAAAAAGTGGGGTTTGATGAGGTTTTAAAGGAATATTTAAAAGAAGATTTAATCCCGCATGAAAAAATCAAAGATTTTAAAACAACAAGCAAGGCGGAAAAATTAGAGCAATTGAGTTTGGAATTAAACGCTTTAAAGCGTTTGTGCGAATACTTTGAAAAAGGGGGGCTAGAAGAGGGTTTGCTTATTTTGGCTAGAGACATTGAAACGCCGTTCATGAAAGTTTTAATGGGCATGGAATTTCAAGGCTTTAAGATTGATGCGCCTTATTTCAAGCGATTAGAGCAGGAGTTTAAAGATGAATTAAACGTTTTAGAGCGCCAAATTTTGGATTTAATCGGCGTGGATTTTAACCTCAATTCGCCCAAGCAACTTAGCGAAGTCTTGTATGAAAAATTAGGGCTTCCTAAAAATAAAAGCCATTCTACCGATGAAAAAAATTTGTTAAAAATCCTAGACAAGCACCCAAGCATCCCTTTGATTTTAGAATACAGGGAATTGAATAAGCTTTTTAACACTTACACCACTCCCTTATTGCGCTTAAAAGACAAAGACGATAAAATCCATACCACTTTCATCCAAACCGGCACAGCTACCGGGCGTTTAAGCTCGCATTCGCCTAATTTGCAAAATATCCCGGTGCGATCGCCTAAAGGCTTACTCATTCGTAAGGGCTTTATCGCTAGCTCTAAAGAATATTGTTTGCTAGGGGTGGATTATTCGCAGATTGAATTGCGCTTATTAGCCCATTTCAGCCAGGATAAGGATTTAATGGAGGCGTTTTTAAAGGGGCGAGACATCCATTTAGAAACTTCTAAAGCGTTGTTTGGAGAAGATCTGGCCAAAGAAAAACGATCCATCGCTAAAAGCATTAATTTTGGGCTGGTGTATGGCATGGGGAGTAAGAAATTGAGCGAAACTTTAAACATCCCTTTAAGTGAGGCTAAAAGTTACATAGAAGCGTATTTCAAGCGATTCCCTAGCATTAAAGATTATTTAAATGGCATGCGAGAAGAGATTTTAAAAACTTCTAAGGCCTTTACTTTGCTGGGGCGTTACCGGGTGTTTGATTTTAATGGCGTGAATGATTATGTCAAGGGCAATTATTTGCGAGAGGGCGTGAATGCGATTTTTCAAGGGAGCGCGAGCGATTTATTGAAATTAGGCATGCTCAAAGTGAGCGAGCGTTTCAAAAATAACCCTTCGGTGAGGCTGCTTTTGCAAGTGCATGACGAATTGATTTTTGAAATTGAAGAAAAAAACGCCCCAGAGTTGCAGCAAGAAATCCAACGCATTCTTAATGATGAAGTGTATCCTTTGAGGGTGCCGTTAGAAACGAGCGCGTTTATCGCTAAGCGTTGGAATGAACTAAAAGGTTAG
Protein sequences of DBSCAN-SWA_1 >NZ_LT635472|1424666:1435546|1424666_1426712_+|WP_172825134.1|DBSCAN-SWA MGFEKSILDNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLTLTFTNKASKEMQERALKLLENQALIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLYLSLKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSCAHHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHKSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEESLDLEEALKIGAFKDKLNPKNEYALNKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKEDNYEEREGFIKELLSLVKEHFKTNPTHSLLDFLNESVLDVHNTENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKISCSPSVFLEEAQLLKSDQTPKQDHPKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISEKFVEKVDNEF >NZ_LT635472|1424666:1435546|1429585_1431622_+|WP_089087244.1|DBSCAN-SWA MNKVPSIEPQIADKFNNELRNYGLDYKLEQESLNTEIDEALKNYASKSGGLGGNRPDVKLLLNTQDPNRRIPILIEYKGLKDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANAILHHTDYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLGMGIDVSKGEQAYSDLSFLSRKHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLTCLNNDIYKKDKLSLSEEDRLYLVVASIIANLGISNLVAPLKKEDLKSSDEVHQRDGDIMLRKIQSFLEYKHLPQEKKQSIISLLEPLLKNENDNKAINGESRLKRCFSEIVDNLGIYYKIGLSTDFTGKLFNEMYRWLGFTQDQLNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVASMNLMIEDAKKRITSPKELEQKIAHIKAKQLLGIEKLQKIYILAVLNMILMGDGSSQILNQDSLSGFDGKVNNKEFKANAFVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIKMPLDLFIGKSSVQTHIYVFRVNEKHDAKQKVKFINFSNDGYARANRKKAKASHNLKDTHNAKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDWNQNKPTDTKPELEDFKRTIADYLSYEVGLILKNQTPPK >NZ_LT635472|1424666:1435546|1431618_1432800_+|WP_089087245.1|DBSCAN-SWA MIGPLSSQLNAIKWGEFRLGDLFEASNGDFDIQKRHINHKGEFVITAGLSNNGVLGQSDIKAKVFESHTITIDMFGCAFYRSFPYKMVTHARVFSLKPKFEINHKIGLFLSTLFFGYPKKFGYENMCSWVKIKNDKVILPLKPTANTQTFEDIDFHFMEKFIAELEAYLKVTGLENTTLSSDEENALNVFNGNNSGGGNTPCGLTWQHFKLGDLFEIRPTKAYNLTNPHLFDSNAKNPVVTNSSLNNGISGYSPLEPTEKGNQITYSDTTTSEGIFYQKRPFIGYSHVQGLYPLKYHEFWNEKTLLYIVVAFKKVACGRFDYGNKFNRKIASEMSIILPTNPHGGIDFHFMRTIINALMKQTIQGVVQYCSAQIQATKEIISQEAPVQKDSLF >NZ_LT635472|1424666:1435546|1428412_1428988_+|WP_000289021.1|DBSCAN-SWA MYVALEGVDGAGKSTQVELLKNRFKNALFTKEPGGTRMGESLRYIALNENISELARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSEFSSLELNLLATQSILPAKIVLLLIDKEGLKQRLSLKSLDKIENQGTEKLLTIQQKLKAHAYALKEKFGCEVLELNAKESVKNLHEQITAFIECAV >NZ_LT635472|1424666:1435546|1427374_1427938_+|WP_000780111.1|DBSCAN-SWA MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSATFFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLAHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDLYPRWGMN >NZ_LT635472|1424666:1435546|1427937_1428411_+|WP_042636077.1|DBSCAN-SWA MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATTSFTNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKV >NZ_LT635472|1424666:1435546|1428975_1429551_+|WP_001203585.1|DBSCAN-SWA MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKGLNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGTLRATNTISYAGKSLEFRANHPRDFTFKGDKNLDYFLLDDIITTGTTLKEALKYLKALNIKAHFAIALCSADE >NZ_LT635472|1424666:1435546|1432870_1435546_+|WP_172825135.1|DBSCAN-SWA MEQPVIKEGTLALIDTFAYLFRSYYMSAKTKPLTNDKGFPTGLLTGLVGMVKKFYKDKKNMPFIVFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEMSGFEADDVIATLATLSPYKTRIYSKDKDFNQLLSDKIALFDGKTEFLAKDCVEKYGILPSQFTDYQGIVGDSSDNYKGIKGIGSKNAKELLQQLGSLEKIYENLDLAKNLLSPKMYQALIQDKESAFLSKELATLERGCIKEFDFLSCAFPSENPLLKIKDELKEYGFISTLRDLEKSPLIVENAPILDSAPALENAPKKSCMIVLESAEPLSMFLEKLKNPNARVFMRLVLDKEKKVLALAFLLQDQGYFLPLEEALFSPFSLEFLQNAFSQMLQHAQIIGHDLKPLLSFLKAKYQVSLENIRIQDTQILAFLKNPEKVGFDEVLKEYLKEDLIPHEKIKDFKTTSKAEKLEQLSLELNALKRLCEYFEKGGLEEGLLILARDIETPFMKVLMGMEFQGFKIDAPYFKRLEQEFKDELNVLERQILDLIGVDFNLNSPKQLSEVLYEKLGLPKNKSHSTDEKNLLKILDKHPSIPLILEYRELNKLFNTYTTPLLRLKDKDDKIHTTFIQTGTATGRLSSHSPNLQNIPVRSPKGLLIRKGFIASSKEYCLLGVDYSQIELRLLAHFSQDKDLMEAFLKGRDIHLETSKALFGEDLAKEKRSIAKSINFGLVYGMGSKKLSETLNIPLSEAKSYIEAYFKRFPSIKDYLNGMREEILKTSKAFTLLGRYRVFDFNGVNDYVKGNYLREGVNAIFQGSASDLLKLGMLKVSERFKNNPSVRLLLQVHDELIFEIEEKNAPELQQEIQRILNDEVYPLRVPLETSAFIAKRWNELKG >NZ_LT635472|1424666:1435546|1426708_1427365_+|WP_089087243.1|DBSCAN-SWA MKILTLFLIGLNALFALDLNTLKTGIKETYLKEYQDLKLEIETINLEIPERFSHASILSYELSASNKLKKDGVVFLKLENEPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTKKERVSFGALSNPLLEGAIDKVSAKHFIPPDTLLSTDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL |
9 | uncultured_Caudovirales_phage(33.33%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|