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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT838199 Escherichia coli isolate WI1 isolate plasmid pWI1-incI1, complete sequence 0 crisprs NA 0 0 0 0
NZ_LT838198 Escherichia coli isolate WI1 isolate plasmid pWI1-incFII, complete sequence 0 crisprs NA 0 0 0 0
NZ_LT838197 Escherichia coli isolate WI1 isolate plasmid pWI1-KPC3, complete sequence 0 crisprs NA 0 0 0 0
NZ_LT838196 Escherichia coli isolate WI1 isolate chromosome WI1 9 crisprs csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,RT 0 25 11 0

Results visualization

1. NZ_LT838196
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_1 1010179-1010818 Orphan I-E
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_2 1012140-1012229 Unclear I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_3 1037780-1038540 TypeI-E I-E
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_4 1574109-1574226 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_5 2185967-2186090 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_6 2923188-2923279 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_7 3234544-3234688 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_8 3468870-3468966 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT838196_9 3609011-3609155 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_LT838196_6 6.1|2923214|40|NZ_LT838196|CRISPRCasFinder 2923214-2923253 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11833-11866 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36518-36551 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9504-9537 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65532-65565 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64163-64196 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119282-119315 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85097-85130 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42114-42147 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87235-87268 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70498-70531 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62995-63028 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MH422554 Escherichia phage P1, complete genome 87192-87225 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NC_050152 Enterobacteria phage P7, complete genome 93993-94026 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58643-58676 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MH445381 Escherichia virus P1, complete genome 56868-56901 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42180 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1590 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94789 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61949 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20319 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46721 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81886 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47894 1 0.971
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NC_031129 Salmonella phage SJ46, complete genome 77363-77396 1 0.971
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 71166-71197 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 71579-71610 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 57771-57802 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 49237-49268 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 80644-80675 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 43940-43971 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 30387-30418 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_MH257954 Escherichia coli strain 104 plasmid pHXH-2, complete sequence 71853-71884 2 0.938
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 CP053388 Escherichia phage CMS-2020a, complete sequence 69160-69191 2 0.938
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_LT838196_3 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT 1038480-1038511 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_LT838196_5 5.1|2186010|38|NZ_LT838196|CRISPRCasFinder 2186010-2186047 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP041423 Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence 57769-57802 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 49235-49268 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP031136 Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence 30385-30418 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 71166-71199 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 71579-71612 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP022167 Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence 80644-80677 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 43940-43973 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 NZ_MH257954 Escherichia coli strain 104 plasmid pHXH-2, complete sequence 71853-71886 3 0.912
NZ_LT838196_3 3.23|1038419|34|NZ_LT838196|PILER-CR 1038419-1038452 34 CP053388 Escherichia phage CMS-2020a, complete sequence 69160-69193 3 0.912
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17438-17471 3 0.912
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122308-122341 3 0.912
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6027-6060 3 0.912
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131400-131433 3 0.912
NZ_LT838196_3 3.24|1038480|34|NZ_LT838196|PILER-CR 1038480-1038513 34 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15154 3 0.912
NZ_LT838196_3 3.6|1038114|32|NZ_LT838196|CRISPRCasFinder,CRT 1038114-1038145 32 MN340231 Escherichia phage phiv205-1, complete genome 27201-27232 5 0.844
NZ_LT838196_3 3.6|1038114|32|NZ_LT838196|CRISPRCasFinder,CRT 1038114-1038145 32 NC_049952 Escherichia virus Lambda_2B8 genome assembly, chromosome: 1 47909-47940 5 0.844
NZ_LT838196_3 3.7|1038175|32|NZ_LT838196|CRISPRCasFinder,CRT 1038175-1038206 32 NZ_CP011408 Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence 35508-35539 5 0.844
NZ_LT838196_1 1.6|1010513|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT 1010513-1010544 32 MT375042 Acinetobacter phage vB_AbaP_Alexa, complete genome 10578-10609 6 0.812
NZ_LT838196_3 3.7|1038175|32|NZ_LT838196|CRISPRCasFinder,CRT 1038175-1038206 32 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 31692-31723 6 0.812
NZ_LT838196_3 3.18|1038114|34|NZ_LT838196|PILER-CR 1038114-1038147 34 MN340231 Escherichia phage phiv205-1, complete genome 27199-27232 6 0.824
NZ_LT838196_3 3.18|1038114|34|NZ_LT838196|PILER-CR 1038114-1038147 34 NC_049952 Escherichia virus Lambda_2B8 genome assembly, chromosome: 1 47909-47942 6 0.824
NZ_LT838196_3 3.19|1038175|34|NZ_LT838196|PILER-CR 1038175-1038208 34 NZ_CP011408 Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence 35508-35541 6 0.824
NZ_LT838196_1 1.6|1010513|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT 1010513-1010544 32 MT708550 Achromobacter phage Mano, complete genome 2350-2381 7 0.781
NZ_LT838196_3 3.1|1037809|32|NZ_LT838196|CRISPRCasFinder,CRT 1037809-1037840 32 NZ_CP014508 Burkholderia sp. PAMC 28687 plasmid 1, complete sequence 105344-105375 7 0.781
NZ_LT838196_3 3.2|1037870|32|NZ_LT838196|CRISPRCasFinder,CRT 1037870-1037901 32 NC_019522 Pectobacterium phage ZF40, complete genome 17445-17476 7 0.781
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NC_009620 Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence 897526-897557 7 0.781
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 585720-585751 7 0.781
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 89866-89897 7 0.781
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NZ_CP021649 Acidovorax sp. T1 plasmid p1-T1, complete sequence 97239-97270 7 0.781
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 75914-75945 7 0.781
NZ_LT838196_1 1.5|1010452|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT 1010452-1010483 32 NC_048106 Synechococcus phage S-CBWM1, complete genome 91746-91777 8 0.75
NZ_LT838196_1 1.9|1010696|33|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT 1010696-1010728 33 NC_021529 Vibrio phage nt-1, complete genome 92163-92195 8 0.758
NZ_LT838196_1 1.10|1010758|32|NZ_LT838196|CRT 1010758-1010789 32 NC_012732 Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence 20202-20233 8 0.75
NZ_LT838196_3 3.1|1037809|32|NZ_LT838196|CRISPRCasFinder,CRT 1037809-1037840 32 NZ_AP017978 Neochlamydia sp. S13 plasmid pS13, complete sequence 118555-118586 8 0.75
NZ_LT838196_3 3.5|1038053|32|NZ_LT838196|CRISPRCasFinder,CRT 1038053-1038084 32 NZ_CP011869 Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence 176963-176994 8 0.75
NZ_LT838196_3 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT 1038236-1038267 32 NZ_CP011054 Halomonas sp. KO116 plasmid unnamed2, complete sequence 177867-177898 8 0.75
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 NZ_CP046399 Bacillus sp. A260 plasmid unnamed11, complete sequence 34220-34251 8 0.75
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 13805-13836 8 0.75
NZ_LT838196_3 3.14|1037870|34|NZ_LT838196|PILER-CR 1037870-1037903 34 NC_019522 Pectobacterium phage ZF40, complete genome 17443-17476 8 0.765
NZ_LT838196_3 3.19|1038175|34|NZ_LT838196|PILER-CR 1038175-1038208 34 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 31692-31725 8 0.765
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 MT028491 Ochrobactrum phage vB_OspM_OC, complete genome 50790-50821 9 0.719
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 NZ_CP011009 Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence 147371-147402 9 0.719
NZ_LT838196_3 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT 1038419-1038450 32 MN693961 Marine virus AFVG_250M531, complete genome 39943-39974 9 0.719
NZ_LT838196_3 3.13|1037809|34|NZ_LT838196|PILER-CR 1037809-1037842 34 NZ_AP017978 Neochlamydia sp. S13 plasmid pS13, complete sequence 118553-118586 9 0.735
NZ_LT838196_3 3.13|1037809|34|NZ_LT838196|PILER-CR 1037809-1037842 34 NZ_CP014508 Burkholderia sp. PAMC 28687 plasmid 1, complete sequence 105344-105377 9 0.735
NZ_LT838196_3 3.20|1038236|34|NZ_LT838196|PILER-CR 1038236-1038269 34 NC_009620 Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence 897526-897559 9 0.735
NZ_LT838196_3 3.20|1038236|34|NZ_LT838196|PILER-CR 1038236-1038269 34 NZ_LR594660 Variovorax sp. PBL-H6 plasmid 2 585718-585751 9 0.735
NZ_LT838196_3 3.20|1038236|34|NZ_LT838196|PILER-CR 1038236-1038269 34 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 89864-89897 9 0.735
NZ_LT838196_3 3.20|1038236|34|NZ_LT838196|PILER-CR 1038236-1038269 34 NZ_CP021649 Acidovorax sp. T1 plasmid p1-T1, complete sequence 97237-97270 9 0.735
NZ_LT838196_3 3.20|1038236|34|NZ_LT838196|PILER-CR 1038236-1038269 34 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 75912-75945 9 0.735
NZ_LT838196_3 3.21|1038297|34|NZ_LT838196|PILER-CR 1038297-1038330 34 NZ_CP046399 Bacillus sp. A260 plasmid unnamed11, complete sequence 34220-34253 9 0.735
NZ_LT838196_3 3.21|1038297|34|NZ_LT838196|PILER-CR 1038297-1038330 34 NZ_CP018742 Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence 13803-13836 9 0.735
NZ_LT838196_1 1.3|1010330|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT 1010330-1010361 32 MN855771 Siphoviridae sp. isolate 189, complete genome 28889-28920 10 0.688
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 NZ_CP020079 Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence 149847-149878 10 0.688
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 NZ_CP013487 Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence 225034-225065 10 0.688
NZ_LT838196_3 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT 1038297-1038328 32 NZ_CP019295 Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence 148571-148602 10 0.688
NZ_LT838196_9 9.1|3609054|59|NZ_LT838196|CRISPRCasFinder 3609054-3609112 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
NZ_LT838196_9 9.1|3609054|59|NZ_LT838196|CRISPRCasFinder 3609054-3609112 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814

1. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 6.1|2923214|40|NZ_LT838196|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

26. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

27. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

28. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

29. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

30. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

31. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

32. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

33. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

34. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

35. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

36. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

37. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

38. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

39. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

40. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

41. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

42. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

43. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

44. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

45. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

46. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

47. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

48. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

49. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

50. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

51. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

52. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

53. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

54. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

55. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

56. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

57. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

58. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

59. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

60. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

61. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

62. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

63. spacer 3.12|1038480|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

64. spacer 5.1|2186010|38|NZ_LT838196|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

65. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

66. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

67. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

68. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

69. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

70. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

71. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

72. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

73. spacer 3.23|1038419|34|NZ_LT838196|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

74. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

75. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

76. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

77. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgttt	Protospacer
************ * ***************** *

78. spacer 3.24|1038480|34|NZ_LT838196|PILER-CR matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

79. spacer 3.6|1038114|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 5, identity: 0.844

tggctgagtacttcggcaaacgacacggcgat	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgat	Protospacer
* **..*************.********.***

80. spacer 3.6|1038114|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_049952 (Escherichia virus Lambda_2B8 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.844

tggctgagtacttcggcaaacgacacggcgat	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgat	Protospacer
* **..*************.********.***

81. spacer 3.7|1038175|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 5, identity: 0.844

agattggttttccagtctttggcggttggcaa	CRISPR spacer
agattggttttccagtctttcgcggtcggagt	Protospacer
******************** *****.** . 

82. spacer 1.6|1010513|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT matches to MT375042 (Acinetobacter phage vB_AbaP_Alexa, complete genome) position: , mismatch: 6, identity: 0.812

cgtagtttcggcagtccagtgcctcgttacgt	CRISPR spacer
catagacacggcagtccagcgcttcgttacgt	Protospacer
*.*** . ***********.**.*********

83. spacer 3.7|1038175|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agattggttttccagtctttggcggttggcaa	CRISPR spacer
aagttggttttccagtctttggcggtcgggtt	Protospacer
*..***********************.**   

84. spacer 3.18|1038114|34|NZ_LT838196|PILER-CR matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 6, identity: 0.824

tggctgagtacttcggcaaacgacacggcgatga	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgatgt	Protospacer
* **..*************.********.**** 

85. spacer 3.18|1038114|34|NZ_LT838196|PILER-CR matches to NC_049952 (Escherichia virus Lambda_2B8 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.824

tggctgagtacttcggcaaacgacacggcgatga	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgatgt	Protospacer
* **..*************.********.**** 

86. spacer 3.19|1038175|34|NZ_LT838196|PILER-CR matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 6, identity: 0.824

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
agattggttttccagtctttcgcggtcggagtga	Protospacer
******************** *****.** . * 

87. spacer 1.6|1010513|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT matches to MT708550 (Achromobacter phage Mano, complete genome) position: , mismatch: 7, identity: 0.781

cgtagtttcggcagtccagtgcctcgttacgt	CRISPR spacer
cgtacacgcggcagtccagggcctcgttgcgg	Protospacer
****  . *********** ********.** 

88. spacer 3.1|1037809|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP014508 (Burkholderia sp. PAMC 28687 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

-ggcaaaaaccatttttttccagagcgatttaa	CRISPR spacer
ctgcaaaag-gatttttttccagagcgatcaac	Protospacer
  ******.  ******************. * 

89. spacer 3.2|1037870|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 7, identity: 0.781

cccagccagaaaacatccgaacgcgttgtctt	CRISPR spacer
cgcgccgagaaaacaaccgaatgcgttgtctg	Protospacer
* *. * ******** *****.********* 

90. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ttacgccggtatcccgctccctgttcagccga	Protospacer
.*..******* *** **************  

91. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

92. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

93. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

94. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

95. spacer 1.5|1010452|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT matches to NC_048106 (Synechococcus phage S-CBWM1, complete genome) position: , mismatch: 8, identity: 0.75

taacgacagagggattaggcagcgaagaggat	CRISPR spacer
tcagtgaagagggataaggcagcgaagaagag	Protospacer
* *  . ******** ************.** 

96. spacer 1.9|1010696|33|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 8, identity: 0.758

ttgacgttgattttgttcgttatgttgccagcc	CRISPR spacer
gagacgttgattttgctcattatgttgactttc	Protospacer
  *************.**.******** *  .*

97. spacer 1.10|1010758|32|NZ_LT838196|CRT matches to NC_012732 (Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence) position: , mismatch: 8, identity: 0.75

ccagaaaacatgaaaaaactttgggaggggat	CRISPR spacer
agggaaaacatgaaaaaactatggaagtagct	Protospacer
  .***************** ***.** .* *

98. spacer 3.1|1037809|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 8, identity: 0.75

ggcaaaaaccatttttttccagagcgatttaa	CRISPR spacer
gcataaaaccatctttttcctgagcgattgtt	Protospacer
*   ********.******* ********   

99. spacer 3.5|1038053|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 8, identity: 0.75

aatggccgggtggtgatgggttcccgttcact	CRISPR spacer
gacggccgggtggtgatggagtcccgcgccca	Protospacer
.*.****************. *****. * * 

100. spacer 3.8|1038236|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgc---cggtagccccctccctgttcagcctc	CRISPR spacer
---tgcgagcggtaacccccaccctgttcagctct	Protospacer
   ***   *****.***** ***********...

101. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *  

102. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *  

103. spacer 3.14|1037870|34|NZ_LT838196|PILER-CR matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 8, identity: 0.765

cccagccagaaaacatccgaacgcgttgtcttga	CRISPR spacer
cgcgccgagaaaacaaccgaatgcgttgtctgca	Protospacer
* *. * ******** *****.*********  *

104. spacer 3.19|1038175|34|NZ_LT838196|PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
aagttggttttccagtctttggcggtcgggttaa	Protospacer
*..***********************.**   . 

105. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 9, identity: 0.719

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tcgtttagagtggtgtattcaaaatctttgac	Protospacer
*  *******  **************    * 

106. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 9, identity: 0.719

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
ttatctttaattattgagatgatgctccgcat	Protospacer
 * ************ ** *******..  * 

107. spacer 3.11|1038419|32|NZ_LT838196|CRISPRCasFinder,CRT matches to MN693961 (Marine virus AFVG_250M531, complete genome) position: , mismatch: 9, identity: 0.719

atttcttt-----aattatttagctgatgcttttaaa	CRISPR spacer
-----tatgaaagaattatttagctgatgcagttaag	Protospacer
     * *     *****************  ****.

108. spacer 3.13|1037809|34|NZ_LT838196|PILER-CR matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 9, identity: 0.735

ggcaaaaaccatttttttccagagcgatttaaga	CRISPR spacer
gcataaaaccatctttttcctgagcgattgttaa	Protospacer
*   ********.******* ********   .*

109. spacer 3.13|1037809|34|NZ_LT838196|PILER-CR matches to NZ_CP014508 (Burkholderia sp. PAMC 28687 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

-ggcaaaaaccatttttttccagagcgatttaaga	CRISPR spacer
ctgcaaaag-gatttttttccagagcgatcaacag	Protospacer
  ******.  ******************. * ..

110. spacer 3.20|1038236|34|NZ_LT838196|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ttacgccggtatcccgctccctgttcagccgacc	Protospacer
.*..******* *** **************   .

111. spacer 3.20|1038236|34|NZ_LT838196|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

112. spacer 3.20|1038236|34|NZ_LT838196|PILER-CR matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

113. spacer 3.20|1038236|34|NZ_LT838196|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

114. spacer 3.20|1038236|34|NZ_LT838196|PILER-CR matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*  

115. spacer 3.21|1038297|34|NZ_LT838196|PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

116. spacer 3.21|1038297|34|NZ_LT838196|PILER-CR matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

117. spacer 1.3|1010330|32|NZ_LT838196|PILER-CR,CRISPRCasFinder,CRT matches to MN855771 (Siphoviridae sp. isolate 189, complete genome) position: , mismatch: 10, identity: 0.688

ccgcctgatggcgacgcgtcttttaaccccat	CRISPR spacer
ggccctgattgcgacgcgtctattaaggctgg	Protospacer
   ****** *********** ****  *.. 

118. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

119. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

120. spacer 3.9|1038297|32|NZ_LT838196|CRISPRCasFinder,CRT matches to NZ_CP019295 (Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *. 

121. spacer 9.1|3609054|59|NZ_LT838196|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

122. spacer 9.1|3609054|59|NZ_LT838196|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1045965 : 1059148 12 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_2 1259866 : 1267102 7 Escherichia_phage(66.67%) transposase NA
DBSCAN-SWA_3 1409528 : 1442766 54 Enterobacteria_phage(43.75%) lysis,holin,terminase NA
DBSCAN-SWA_4 1445823 : 1456091 10 Enterobacteria_phage(42.86%) integrase,plate attL 1450882:1450896|attR 1463722:1463736
DBSCAN-SWA_5 1702691 : 1712132 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_6 1845542 : 1851308 9 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_7 2259823 : 2330147 86 Enterobacteria_phage(35.19%) lysis,transposase,capsid,head,integrase,protease,tail attL 2254174:2254189|attR 2288831:2288846
DBSCAN-SWA_8 2511564 : 2601427 92 Escherichia_phage(44.44%) lysis,transposase,terminase,tRNA,holin,tail NA
DBSCAN-SWA_9 3188216 : 3233060 64 Enterobacteria_phage(51.61%) lysis,portal,transposase,terminase,capsid,head,integrase,protease,tail attL 3209486:3209501|attR 3234768:3234783
DBSCAN-SWA_10 3738139 : 3765470 24 Clostridioides_phage(25.0%) transposase,plate NA
DBSCAN-SWA_11 4127893 : 4190561 49 Stx2-converting_phage(28.57%) transposase,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage