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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT906456 Actinobacillus suis strain NCTC12996 chromosome 1 3 crisprs DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK 1 11 3 0

Results visualization

1. NZ_LT906456
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT906456_1 484309-484381 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT906456_2 559593-560618 orTypeII NA
15 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT906456_3 987637-987734 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LT906456_2 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560025-560054 30 NZ_LT906456.1 823176-823205 0 1.0

1. spacer 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to position: 823176-823205, mismatch: 0, identity: 1.0

ttcgtttaccgcatcatagttaaagccttc	CRISPR spacer
ttcgtttaccgcatcatagttaaagccttc	Protospacer
******************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT906456_2 2.4|559827|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559827-559856 30 NZ_CP007001 Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence 6244-6273 0 1.0
NZ_LT906456_2 2.11|560289|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560289-560318 30 NC_028766 Mannheimia phage vB_MhM_3927AP2, complete genome 23285-23314 1 0.967
NZ_LT906456_2 2.14|560487|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560487-560516 30 MT448617 Vibrio phage River4, complete genome 78715-78744 4 0.867
NZ_LT906456_1 1.1|484332|27|NZ_LT906456|CRISPRCasFinder 484332-484358 27 NZ_CP049813 Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence 98012-98038 6 0.778
NZ_LT906456_2 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT 559629-559658 30 NZ_CP020079 Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence 186225-186254 6 0.8
NZ_LT906456_2 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT 559629-559658 30 NZ_CP013487 Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence 249654-249683 6 0.8
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 NZ_CP032119 Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.4, complete sequence 3774-3803 6 0.8
NZ_LT906456_2 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560025-560054 30 MT074463 Salmonella phage gmork, complete genome 100913-100942 6 0.8
NZ_LT906456_2 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560025-560054 30 MH370386 Salmonella phage S147, complete genome 86674-86703 6 0.8
NZ_LT906456_2 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560025-560054 30 MT074456 Salmonella phage polluks, complete genome 100262-100291 6 0.8
NZ_LT906456_2 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560025-560054 30 MT004791 Salmonella phage vB_SenS-3, complete genome 20451-20480 6 0.8
NZ_LT906456_2 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT 559629-559658 30 MN855811 Bacteriophage sp. isolate 126, partial genome 905-934 7 0.767
NZ_LT906456_2 2.10|560223|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560223-560252 30 NC_014617 Bacillus sp. JAMB750 plasmid pJAM1 DNA, complete sequence 3780-3809 7 0.767
NZ_LT906456_2 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT 560553-560582 30 MT939487 Erwinia phage pEa_SNUABM_47, complete genome 39394-39423 7 0.767
NZ_LT906456_2 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT 560553-560582 30 NC_041917 Serratia phage BF, complete genome 39756-39785 7 0.767
NZ_LT906456_2 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT 560553-560582 30 MT939488 Erwinia phage pEa_SNUABM_50, complete genome 39261-39290 7 0.767
NZ_LT906456_2 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT 559629-559658 30 NC_019699 Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence 117247-117276 8 0.733
NZ_LT906456_2 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT 559629-559658 30 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 19448-19477 8 0.733
NZ_LT906456_2 2.3|559761|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559761-559790 30 NZ_CP050089 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence 17036-17065 8 0.733
NZ_LT906456_2 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560091-560120 30 MN855824 Bacteriophage sp. isolate 165, complete genome 11952-11981 8 0.733
NZ_LT906456_2 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560091-560120 30 MK605246 Nodularia phage vB_NspS-kac68v162, complete genome 120600-120629 8 0.733
NZ_LT906456_2 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560091-560120 30 KU230356 Bacteriophage vB_NpeS-2AV2, complete genome 115408-115437 8 0.733
NZ_LT906456_2 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560091-560120 30 NC_048757 Nodularia phage vB_NspS-kac68v161, complete genome 121991-122020 8 0.733
NZ_LT906456_2 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT 560553-560582 30 MT939486 Erwinia phage pEa_SNUABM_12, complete genome 39796-39825 8 0.733
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 MN871480 UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome 69756-69785 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 MT133560 Pseudomonas phage fnug, complete genome 214094-214123 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 DI373487 KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof 93839-93868 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 MN871489 UNVERIFIED: Pseudomonas phage PaZh_1, complete genome 101620-101649 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 NC_042081 Pseudomonas phage SL2, complete genome 72277-72306 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 KU521356 Pseudomonas phage KTN4, complete genome 214646-214675 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 MW057919 Pseudomonas phage vB_PaeM_kmuB, complete genome 213389-213418 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 NC_042060 Pseudomonas phage PA7, partial genome 93839-93868 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 AP019418 Pseudomonas phage PA02 DNA, nearly complete genome 11251-11280 9 0.7
NZ_LT906456_2 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 559893-559922 30 NC_004629 Pseudomonas phage phiKZ, complete genome 214699-214728 9 0.7
NZ_LT906456_2 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560091-560120 30 NZ_CP050441 Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence 10951-10980 9 0.7
NZ_LT906456_2 2.14|560487|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR 560487-560516 30 NZ_KY000060 Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence 12074-12103 9 0.7

1. spacer 2.4|559827|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007001 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence) position: , mismatch: 0, identity: 1.0

tataaccgataaattgccaatcatcggtaa	CRISPR spacer
tataaccgataaattgccaatcatcggtaa	Protospacer
******************************

2. spacer 2.11|560289|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_028766 (Mannheimia phage vB_MhM_3927AP2, complete genome) position: , mismatch: 1, identity: 0.967

ctttcgctctcgctttggctcgccccattt	CRISPR spacer
ctttcgctctcgctttggctcaccccattt	Protospacer
*********************.********

3. spacer 2.14|560487|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MT448617 (Vibrio phage River4, complete genome) position: , mismatch: 4, identity: 0.867

taggacggagcttataccttcgtaaagcaa	CRISPR spacer
atgggcggagcttatacctccgtaaagcaa	Protospacer
  **.**************.**********

4. spacer 1.1|484332|27|NZ_LT906456|CRISPRCasFinder matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgattgaaatctgtggcggtaggtt	CRISPR spacer
gcggatcgaaatctgtggcggtgggtg	Protospacer
 . ***.***************.*** 

5. spacer 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 6, identity: 0.8

cctaagaatg----ttgttatcaatattgattca	CRISPR spacer
----agaatagattttgttatcgatattgattca	Protospacer
    *****.    ********.***********

6. spacer 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 6, identity: 0.8

cctaagaatg----ttgttatcaatattgattca	CRISPR spacer
----agaatagattttgttatcgatattgattca	Protospacer
    *****.    ********.***********

7. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032119 (Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.4, complete sequence) position: , mismatch: 6, identity: 0.8

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
gtaccttgagagtatttattcatttctgga	Protospacer
. * * ****** ************.****

8. spacer 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MT074463 (Salmonella phage gmork, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

9. spacer 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MH370386 (Salmonella phage S147, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

10. spacer 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MT074456 (Salmonella phage polluks, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

11. spacer 2.7|560025|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MT004791 (Salmonella phage vB_SenS-3, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

12. spacer 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT matches to MN855811 (Bacteriophage sp. isolate 126, partial genome) position: , mismatch: 7, identity: 0.767

cctaagaatgttgttatcaatattgattca	CRISPR spacer
ctcaagaatgttgttatccatatggatgag	Protospacer
*..*************** **** ***  .

13. spacer 2.10|560223|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_014617 (Bacillus sp. JAMB750 plasmid pJAM1 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tacaccgtttgagcaagaagtgccctgatt	CRISPR spacer
gccatagtttgagaaagaagtgccctgtta	Protospacer
  **. ******* ************* * 

14. spacer 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.*********** 

15. spacer 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.*********** 

16. spacer 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.*********** 

17. spacer 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 8, identity: 0.733

cctaagaatgttgttatcaatattgattca	CRISPR spacer
agcgataatgttgttaactatattgattct	Protospacer
  ..* ********** * ********** 

18. spacer 2.1|559629|30|NZ_LT906456|CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 8, identity: 0.733

cctaagaatgttgttatcaatattgattca	CRISPR spacer
gcgtggaatgttgtaatcaatattgacata	Protospacer
 *  .********* ***********. .*

19. spacer 2.3|559761|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 8, identity: 0.733

gacagcattaatatcgcgatccgcatcctc	CRISPR spacer
cagagcatgaatatcgcgatctgcataaag	Protospacer
 * ***** ************.****    

20. spacer 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MN855824 (Bacteriophage sp. isolate 165, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
caaaaatgcaaaatatggcagcaaaccagt	Protospacer
 ********.*** **********  . * 

21. spacer 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MK605246 (Nodularia phage vB_NspS-kac68v162, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

22. spacer 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to KU230356 (Bacteriophage vB_NpeS-2AV2, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

23. spacer 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_048757 (Nodularia phage vB_NspS-kac68v161, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

24. spacer 2.15|560553|30|NZ_LT906456|CRISPRCasFinder,CRT matches to MT939486 (Erwinia phage pEa_SNUABM_12, complete genome) position: , mismatch: 8, identity: 0.733

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tagttcaataaagtgatataagcatataat	Protospacer
  . * ***.*******.*********** 

25. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

26. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

27. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

28. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

29. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

30. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

31. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

32. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

33. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

34. spacer 2.5|559893|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ******** 

35. spacer 2.8|560091|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050441 (Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
tatccccgcgaaaaatagcagcaatattat	Protospacer
 *    .*********.***********. 

36. spacer 2.14|560487|30|NZ_LT906456|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000060 (Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence) position: , mismatch: 9, identity: 0.7

taggacggagcttataccttcgtaaagcaa	CRISPR spacer
caggacggagcatataccttcgcactctct	Protospacer
.********** **********.*   .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 359390 : 367762 8 Stx_converting_phage(33.33%) tRNA NA
DBSCAN-SWA_2 636160 : 647775 13 uncultured_Caudovirales_phage(71.43%) protease,head,portal,terminase,capsid,tail,tRNA NA
DBSCAN-SWA_3 1136950 : 1143513 7 Staphylococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage