CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT906481	Corynebacterium urealyticum strain NCTC12011 chromosome 1	7 crisprs	csa3,DEDDh,cas4,WYL,DinG,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	0	24	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT906481_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_2

390593-390678

Orphan

Consensus_repeat	Method
CTTTTTCGCCGTCTTCTTCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT906481_2

>merge|NZ_LT906481|2|390593-390678|CRISPRCasFinder
TGCGGACGCCGTCTTCTTCGCGGCAGTGGCGCTTGTTACCTTGCGGGCCGTGCGCTTGACTGCCTTGCGAGCCGTCTTCTTGGCGA

>NZ_LT906481|2|2|390593-390678|CRISPRCasFinder
TGCGGACGCCGTCTTCTTCGCGG	CAGTGGCGCTTGTTACCTTGCGGGCCGTGCGCTTGACTGC
CTTGCGAGCCGTCTTCTTGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012360157.1\|395663_396914_+\|class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|225174
NZ_LT906481.1\|WP_012360144.1\|383695_384163_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_LT906481.1\|WP_012360149.1\|388691_388982_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378240
NZ_LT906481.1\|WP_012360155.1\|394358_394808_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NZ_LT906481.1\|WP_012360158.1\|396957_398874_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_LT906481.1\|WP_012360143.1\|382498_383521_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|181169
NZ_LT906481.1\|WP_050816643.1\|380608_381625_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_LT906481.1\|WP_012360148.1\|386806_388543_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_LT906481.1\|WP_012360145.1\|384173_385943_-\|methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_LT906481.1\|WP_012360152.1\|392023_393061_+\|myo-inositol-1(or-4)-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_LT906481.1\|WP_012360154.1\|393612_394137_-\|DUF3093-domain-containing-protein	unknown	unknown	gnl\|CDD\|378627
NZ_LT906481.1\|WP_012360153.1\|393246_393546_+\|DUF4193-domain-containing-protein	unknown	unknown	gnl\|CDD\|379391
NZ_LT906481.1\|WP_012360142.1\|381687_382407_-\|metal-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224240
NZ_LT906481.1\|WP_012360146.1\|386020_386491_-\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630
NZ_LT906481.1\|WP_012360147.1\|386551_386794_+\|DUF3039-domain-containing-protein	unknown	unknown	gnl\|CDD\|378609
NZ_LT906481.1\|WP_012360156.1\|394924_395671_+\|DUF3710-domain-containing-protein	unknown	unknown	gnl\|CDD\|378867
NZ_LT906481.1\|WP_012360159.1\|399074_400118_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966
NZ_LT906481.1\|WP_012360160.1\|400205_401351_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_LT906481.1\|WP_012360140.1\|379487_380612_+\|DUF4192-domain-containing-protein	unknown	unknown	gnl\|CDD\|379390
NZ_LT906481.1\|WP_012360151.1\|391109_392015_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012360157.1\|395663_396914_+\|class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	2.60211e-60
NZ_LT906481.1\|WP_012360144.1\|383695_384163_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.13841e-67
NZ_LT906481.1\|WP_012360149.1\|388691_388982_+\|hypothetical-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	0.00850972
NZ_LT906481.1\|WP_012360155.1\|394358_394808_+\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	6.01999e-61
NZ_LT906481.1\|WP_012360158.1\|396957_398874_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_LT906481.1\|WP_012360143.1\|382498_383521_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|181169	PRK07921, PRK07921, RNA polymerase sigma factor SigB; Reviewed.	0
NZ_LT906481.1\|WP_050816643.1\|380608_381625_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	3.13945e-174
NZ_LT906481.1\|WP_012360148.1\|386806_388543_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.17143e-60
NZ_LT906481.1\|WP_012360145.1\|384173_385943_-\|methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.42929e-23
NZ_LT906481.1\|WP_012360152.1\|392023_393061_+\|myo-inositol-1(or-4)-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	1.50362e-68
NZ_LT906481.1\|WP_012360154.1\|393612_394137_-\|DUF3093-domain-containing-protein	gnl\|CDD\|378627	pfam11292, DUF3093, Protein of unknown function (DUF3093). This family of proteins with unknown function appears to be restricted to Actinobacteria. Some members are annotated as alanine rich membrane proteins however this cannot be confirmed.	5.1381e-48
NZ_LT906481.1\|WP_012360153.1\|393246_393546_+\|DUF4193-domain-containing-protein	gnl\|CDD\|379391	pfam13834, DUF4193, Domain of unknown function (DUF4193). This domain of unknown function contains four conserved cysteines and a conserved histidine, including a CXXXXH motif.	1.1122e-41
NZ_LT906481.1\|WP_012360142.1\|381687_382407_-\|metal-dependent-transcriptional-regulator	gnl\|CDD\|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	2.41669e-47
NZ_LT906481.1\|WP_012360146.1\|386020_386491_-\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	3.3842e-23
NZ_LT906481.1\|WP_012360147.1\|386551_386794_+\|DUF3039-domain-containing-protein	gnl\|CDD\|378609	pfam11238, DUF3039, Protein of unknown function (DUF3039). This family of proteins with unknown function appears to be restricted to Actinobacteria.	5.22765e-29
NZ_LT906481.1\|WP_012360156.1\|394924_395671_+\|DUF3710-domain-containing-protein	gnl\|CDD\|378867	pfam12502, DUF3710, Protein of unknown function (DUF3710). This family of proteins is found in bacteria. Proteins in this family are typically between 237 and 284 amino acids in length. There are two conserved sequence motifs: DLG and DGPRW.	1.23939e-67
NZ_LT906481.1\|WP_012360159.1\|399074_400118_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	3.16892e-94
NZ_LT906481.1\|WP_012360160.1\|400205_401351_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.46771e-110
NZ_LT906481.1\|WP_012360140.1\|379487_380612_+\|DUF4192-domain-containing-protein	gnl\|CDD\|379390	pfam13830, DUF4192, Domain of unknown function (DUF4192).	2.24311e-15
NZ_LT906481.1\|WP_012360151.1\|391109_392015_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	8.23606e-22

>NZ_LT906481.1|WP_012360149.1|388691_388982_+|hypothetical-protein
MSLAALILGVLALPAGLLPLIGIFVAMIALVVAIIALVRANRHATARTYPIVGLVLAILAMGLALITTKVATEFPEQCQGLSDDKLTQCVKEHRGN
>NZ_LT906481.1|WP_012360148.1|386806_388543_+|DEAD/DEAH-box-helicase
MKRTLRAWQQEALDLYQEQQPRDFLAVATPGAGKTTFALTLASMLLEKRVVQRLVIVVPTEHLKVQWALSAAAMGIALDAEFSNSSPFNNAFDGVAVTYAQVGMKPTKHYQVATAQKTLVILDEIHHAGDAKSWGDGVRLAYAHAERRLALTGTPFRSDDAQIPFVDYIEVPGTDGALESRADYTYGYSEALRDGVVRPVVFMAYSGHARWRSSAGEEFEARLGETLTPEQTARAWRTALDPKGEWIPAVLKAAHTRLLKLRTHIPDAGGLVIATDKTTARAYAKILSTISSTPVTVVLSDEVGASDRIKEFSASQDEWMVAVRMVSEGVDVPRLAVGVYATSAATPLFFAQAIGRFVRSRRKGESASVFLPSVPVLLDLASKLEKQRNHVLGVPKKDEEGWDDELLAQANREENEPDELTTYESIGAEAELDSLIYDGSTYGTTTLAGSAEEQDYLGLPGLLDAEQMRTLLQQRQADQVEARAREAEERKRREAEARRNGSAAGGMSGAEAHRRRVASEELPALRKELNALVNMTAARTGRPQGSIHNEARRNCGGPPTALCTAEQLRDRIAYLRDW
>NZ_LT906481.1|WP_012360147.1|386551_386794_+|DUF3039-domain-containing-protein
MSATSTSTLERPKVDEREQTQDDTPKFFHYVKKDQIVESAVMGRLVVALCGETFPVTKQAKPGSPVCPECEEIYQSLRKK
>NZ_LT906481.1|WP_012360146.1|386020_386491_-|DUF3099-domain-containing-protein
MSAAEKRAGRTRGTSATGARRFRRPGKRVDRITDAKKSQLEDWHHRRRLYLGLQIARIPVLVLAVILLWVTNNLMLGAVVAFISVPLPWVAVMLANESGEATKESEKVYKPGLVRANREALANSQLSQATSPQRQLEPSHVDSAGRHPVIDHKSED
>NZ_LT906481.1|WP_012360145.1|384173_385943_-|methyltransferase
MQSQFPNHDREKKAIPTVTTQPSSMQLTSQPAREALSSLLAASRERGLSTTLLEDVLGEAGLRSLNLANPAGALRSVRSYSRGHSNRDTGAAELVELFVLREPATRARWQELIGTDLTRRAIDARLIASLPGSADELQLRVDIRPYSFPHLFGGADGDAPSLGGEFLLASDPDAGLWPQEPTPDDHVPGLGNAPRSLLRAIPPADNPWLPSPRRILDLGCGGGALSLALQLAYPEAHVVGTDISGRALDFAAINGTQLAQAQGQLSTGVAAPESCIEWREGSWFEPVAGERFDLIVSNPPFVVQPPEVGHVYRDSGLGLDRATELVVSRAPEHLAPGGTAHILCSWAVSAEDSVASKMGRWLPAEGVRAYGLVREYVDPETYVTTWLSDEGIDPRSPEGRRKAGQWLHYLADNGVSHIALGFAHLRAIDGSTEVTVEQLPDTMVPGSPLGAEVAEWFIRSQWLADVSAEDVLAERFAVRPGVATELVRQADAEAGQGFRELSLRLARTDGPAWTHEIDAAVESILAGLNPEGLALEDVLGLYAAVTGPSEDESHVDYEEVLMERMLGIIVDLVRHGIVLPSSLVDWAER
>NZ_LT906481.1|WP_012360144.1|383695_384163_-|D-tyrosyl-tRNA(Tyr)-deacylase
MKAVISTVSQASVDVRDDSGEVRRVGEVSGPALLALIGSGRDDDADAWETMVRKIAELRLFPASGEPWGGQRDLSVEEVGGSVLVVSQFTLMGKTKRGRRPSWSEAMPGPAAEPVIEKIVHGLRNRGIHVETGEFGADMQVSSVNEGPYTVLVEC
>NZ_LT906481.1|WP_012360143.1|382498_383521_-|sigma-70-family-RNA-polymerase-sigma-factor
MSKSTNGSDSAPATSTKDDSSQQEQNTDRRRRRGNNENPSADLVRVYLNGIGKTALLTAEDEVELSQRIEAGLYAEQLLKSGEPLTRAKKRDVKILAREGKAARTHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYKKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLSRIKREMYQHLGREATYEELAEESGIPEDRIEMLMKQSRDPVSLDMPVGTDEEAPLGDFIEDSEAEDAEAAVVASLRHSDIRSVLATLEQREQDVITLRYGLDDGLPRTLDQIGRQFGLSRERVRQIEREVMAKLREGQRADKLREYAV
>NZ_LT906481.1|WP_012360142.1|381687_382407_-|metal-dependent-transcriptional-regulator
MRDLVDTTEMYLRTIYELEEEGIPPLRARIAERLEQSGPTVSQTVARMERDGLLSVEKDRSLKLSAEGRALATAVMRKHRLAERLLTDVIGLPWDKVHDEACRWEHVMSDEVEQRLVEVLDEHDTSPFGNPIPGLNFLTEQAADSTDFSQTAVAEDPNSVRAADLAAGEEHEAVVASFNEIVQVEGSLMKRLRKAGILPGVTVTVIPAEDHLILRIGSAEVAIPSELAHAVRVRSVSDV
>NZ_LT906481.1|WP_050816643.1|380608_381625_-|UDP-glucose-4-epimerase-GalE
MTEHNAIEPGSNVLVTGGAGYVGSVCTAVLIENGFHVTVVDNLSTGNRSAIHPKANFVEGDIADVASEVLADGDFAAVFHFAARSLVGESVEQPDAYWHHNVVTTLTLLDAMREAGVKNIVFSSTAACYGEPEQVPITEDMPTAPTNPYGASKLTIDYMLTSYAKAYDLAATSLRYFNVAGAYQQFGENREVETHLIPIVLQVALGHRESISIFGSDWPTKDGTAVRDYIHIKDLADAHVLAATSNVAGEHRIFNLGSGDGFSVREVIDTCREVTGAEIPAIEAPRRAGDPAVLIASSAKAIAELGWEPKLSDLTTVVSDAWRFTSALGDAAHSAPRP
>NZ_LT906481.1|WP_012360140.1|379487_380612_+|DUF4192-domain-containing-protein
MLGFTPHDSLVLIGLQPASKDRSPRDSSPGTRAAIHRTVTFQVGPVVRADLGGDSTGEAIETFCAALGAPILDTVPTDQCPQAIILVIGDTPARGVDVFTDTRTQLALAGIPVYTSHWAQEIADHQKWATYDLHTQLWVDEGTIPVQSANPVVLHAGVTNALNFAAREDMECWLDEQDPPLAGHLNPQCLDAALNQLLAKTEEILDGLTTVEDAMADQQLLGVIAGLCADPRSQAFVITASIGMPSPVIRSLLAATARHCVGDVRSNVLYVLTQVLVGNGEGVVAFHTARRAVCEATSARGWKDNQVLVIALKTGLALQIVKDKVAIATEVLNGKNPHEDISGDTRKIFTRVLDWDAVGHLRLLDSEGRELENP
>NZ_LT906481.1|WP_012360151.1|391109_392015_-|ROK-family-protein
MSTEQANSAEWAGITVGVDVGGSAIKAGFVDTRNHCLVGERFTAPTPQPATPEAVAGAVATLATQVLAQELGTGLPGASSLSRVQNLRIGVAIPSVVANQQARTAANIAHSWIGTRPAAVFDDALRKALSYGPSDRSALQVEWFFLNDADAAGISECGPCAAGEAADPEYSRLFLTFGTGIGSALFRGSRLYPNTELGHLTVLTDDGSPSAAEHWASAAVKARQHLSFPEWAARVSTVLNTYVALLRPQELILGGGISAESDRWLPKLELEEPSVRVSIARHFNSAGVIGAGLAASWGLRP
>NZ_LT906481.1|WP_012360152.1|392023_393061_+|myo-inositol-1(or-4)-monophosphatase
MLHISGICGGMTETLLLDKSTTNYVPEEIPGAANVRELQAAAEYVAARAAALVLRIRRERTEGEAVAGSVIELMGSAMPVAQTKSSAVDPVTEADRAAENFIREWLHAQFPQATVVGEEEGADDPAPDSSLAEAAGARLEWIVDPIDGTVNFVYGIPAFSVSVAAAFNGVPVAGAVVDAAHSHVFGACVGGPATVAPIDLKGEGVVVGEHKNISRQEGRKDAAQALVATGFSYDAERRQRQAHVLGNVLPHVRDIRRLGSAALDLCMVASGQVDGYYEHGLNGWDYAAGALIAARAGATVVIPTLDYTAESGLPIIAGVPGVQEELEKMLLSQGAGGSIEQLSLP
>NZ_LT906481.1|WP_012360153.1|393246_393546_+|DUF4193-domain-containing-protein
MATDYDAPRRSAEEELETDSLEGLKAAEKAEPAISDTDDGEIVEPFELPMEEVSGEELSTTVTPKQNDEFTCSECFLVQHRSRVGEKLSDTEFICVDCV
>NZ_LT906481.1|WP_012360154.1|393612_394137_-|DUF3093-domain-containing-protein
MDAANGASTPPPARPGEAAGTRVLYSESQRVPLSWWLAAIGVVAIIAWQAQMGRDWWWLLVAGVIAAAPAAWGLIALSRTKIEVFENSQGERIIRAGDAQLPASVVDRTLVIPPTAKQAALGRQLDPAAFVIHKGWIPTMAMLVLDDPLDPTPYWLVSSKNPQKLLEALGRPIY
>NZ_LT906481.1|WP_012360155.1|394358_394808_+|dUTP-diphosphatase
MSSPLEIFQIDPSLPLPNRAHPEDAGIDLYSAEDITLKPGQRSLVGTGIAMAVPVGKVGLVHPRSGLAVKKGLSIVNAPGTIDAGYRGEVKVNLINLDPEETINISRGERIAQVLIQNVSLCEVVTVDSIDQLGETTRGSGGHGSTGTR
>NZ_LT906481.1|WP_012360156.1|394924_395671_+|DUF3710-domain-containing-protein
MWPFSKKKNEPSGVEPSTPHSQAEQEVPGAADGAAAGPTENEHPVQGEDFGPFDGDTLDYREYNFSDFAKGGLDLGSMMIPVPHEAEVQVEMGDDGPQMLHILTPFGRVTPVAFAAPTTGELWDNTVPTLIEGMAADGLEATTEEGPWGAEIVAQSGDGTLRVIGATGPRWMLRMTLAGPQESAEQMAALGREIIARTFVVRGTDPIPAGDPLPVQLPQAMVEELARHLQEKQNTPAQPQMPNKDGND
>NZ_LT906481.1|WP_012360157.1|395663_396914_+|class-I-SAM-dependent-RNA-methyltransferase
MTSPETITLDLDQPGHRGVVIGQHDGQIVFVRGGLPGEKGVEVALDAAKKNGKQRFRTGEALTIDQPSPHRVPGQCDAAAVGAGCCDLDFVDAEGSLDFKQAVVIDQFRRLGKFELPQAFLDAHVRAASLWPFTHYRHRVRLGVDAEGQTGLRKPKSNDIVPVDEVDCAQWLPGLADGVASLNPSPGSEVVVGVGRDGKRSVVELKKTRRGRKRRVLDGEGEVTHSHFGVTWKVPVDAFWQSHISASAYYARWVADRLNGDLHTVWDLYGGCGALSAGLLGSARNIEIVDVASSATHAGRDAFAADRESRAEGAGTAVRFRSSDVGAWLEKLDEVADLDAVVLDPPRTGAGADVIQNVAQHRPPRVIHIGCDPATAARDAGMWRDAGYELREMEIVDAFGLTHHVETLMYFEAAGE
>NZ_LT906481.1|WP_012360158.1|396957_398874_+|1-deoxy-D-xylulose-5-phosphate-synthase
MWDGEKLSSMGILENISSPADLKLLEEGKLDQLAQEIREFLIEKVSATGGHLGPNLGVVELTMALHRVFDSPSDPLIFDTGHQAYVHKILTGRRDLFDTLRQKDGLSGYPDRAESPHDWTESSHASASLSYADGLAKAFELSGQTHRHVAAVVGDGALTGGMCWEALNNIATGKKRSIVIVVNDNGRSYSPTIGGLAENLAALRLQPAYDKVMESGKNTLGRMGWVGDRAFQLISGLKEGVKHSILPQEMFSDLGLKYIGPVDGHDIGQVENALRYAKDYGGPVIVHTITHKGKGFDPAENDEADQMHATGVIDPVTGVPKEASKPGWTQVFSSHLIERAGERDDVVAITAAMAGPTGLAEFGEVYPQRTFDVGIAEQHAVTSAAGLALGGLHPVVAVYSTFLNRAFDQMLMDVGLLGLGVTFVLDRAGITGPDGASHNGMWDMSITGIVPGIHVAAPRDGAQLRLALDRCLDVDDAPTVVRFPKGSVPADISAVRQESSYDVLFEHSADDGDGAKKLLVINYGALVGQSRAAAEAAKSKGWEAAVVDPHWVYPVSEQLVELANDADLVVTVEDNGIHGGAGSALQAALSAAEVDTPVRLLAVPQEYLAHASRGEVLEEIGLDVATVERRVTGWLDRF
>NZ_LT906481.1|WP_012360159.1|399074_400118_+|ABC-transporter-substrate-binding-protein
MLVRSFFGIIPAVPRCRGWPGRTRKSKRLKISHALVAAAAGFSLILTGCAAENNSAENNSASSQQNNADRTYTLEAENGTIELESEPKRIVVLDYASLDTLAALGEKDRVVSTAKAATMPKAAEGIEANAGSLKEPDMEAIAAADPDLILIGGRQAKMLKEFEKIAPTANMTINYDHYTIDSSLERVEALGKLFGKEAEAKEKADEIRDRVKKIADSVPADKKEAAVLMTSGGEISLYGADSRFGLVFNDLGFTPAGNIDSDSAHGENASFELLKKINPKTIFVIDRDAAIGQEGHSAKATLDNELVKQTDAAKEDRIYMLSGADWYLNGGGIDGLNTMLDDIEQAL
>NZ_LT906481.1|WP_012360160.1|400205_401351_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MGTNGSVSTLTRQDGAPLSHAPQTSYRDQVGAQSVAIDAVAGNNPAATAEPTDRTTPRSRGPVYAIILAGVLVVLSLLSLMLGAADADSSVVAVSRIPRTLAALLAGSALAMGGLIMQLLARNRFVEASTVGSTESAMAGLLVVALLLPGAPMWAKLGMASLTALIGTIGFLVIVSRIKVRTGFTVPLVGIIYGGIIGAATTFFAYSFDLLQSLGAWQLGSFAGVLRGRYELLWLVAVLALAAYVLADRLTLLGLGHDLAKGVGVRVKVVEYSAIVIVAVIAAVTVTVVGAIPFIGLIVPNLVRARIGDNARKALPWVAACGAAMTLGGDILSRIIRYPYEIPVGTVLGVLGAAVFIYVLIRGARIQSSTKPKLFRRARRG

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Crispr_ID: NZ_LT906481_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_1

390392-390511

Orphan

Consensus_repeat	Method
CTTTTTCGCCGTCTTCTTCGCGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LT906481_1

>merge|NZ_LT906481|1|390392-390511|CRISPRCasFinder
CTTCTTGGCAGCCTTCTTGGCGGTCTTTTTCGCCGTCTTTTTAGCGGTCTTCTTGGCGGTCTTTTTCGCCGTCTTCTTCGCGACCTTGCGGGTGGCCTTCTTAGCCGCCTTCTTCGCCGT

>NZ_LT906481|1|1|390392-390511|CRISPRCasFinder
CTTCTTGGCAGCCTTCTTGGCGG	TCTTTTTCGCCGTCTTTTTAGCGGT
CTTCTTGGCGGTCTTTTTCGCCG	TCTTCTTCGCGACCTTGCGGGTGGC
CTTCTTAGCCGCCTTCTTCGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012360157.1\|395663_396914_+\|class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|225174
NZ_LT906481.1\|WP_012360144.1\|383695_384163_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_LT906481.1\|WP_012360149.1\|388691_388982_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378240
NZ_LT906481.1\|WP_012360155.1\|394358_394808_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NZ_LT906481.1\|WP_012360158.1\|396957_398874_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_LT906481.1\|WP_012360143.1\|382498_383521_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|181169
NZ_LT906481.1\|WP_050816643.1\|380608_381625_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_LT906481.1\|WP_012360148.1\|386806_388543_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_LT906481.1\|WP_012360145.1\|384173_385943_-\|methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_LT906481.1\|WP_012360152.1\|392023_393061_+\|myo-inositol-1(or-4)-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_LT906481.1\|WP_012360154.1\|393612_394137_-\|DUF3093-domain-containing-protein	unknown	unknown	gnl\|CDD\|378627
NZ_LT906481.1\|WP_012360153.1\|393246_393546_+\|DUF4193-domain-containing-protein	unknown	unknown	gnl\|CDD\|379391
NZ_LT906481.1\|WP_012360142.1\|381687_382407_-\|metal-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224240
NZ_LT906481.1\|WP_012360146.1\|386020_386491_-\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630
NZ_LT906481.1\|WP_012360147.1\|386551_386794_+\|DUF3039-domain-containing-protein	unknown	unknown	gnl\|CDD\|378609
NZ_LT906481.1\|WP_012360156.1\|394924_395671_+\|DUF3710-domain-containing-protein	unknown	unknown	gnl\|CDD\|378867
NZ_LT906481.1\|WP_012360159.1\|399074_400118_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966
NZ_LT906481.1\|WP_012360160.1\|400205_401351_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_LT906481.1\|WP_012360140.1\|379487_380612_+\|DUF4192-domain-containing-protein	unknown	unknown	gnl\|CDD\|379390
NZ_LT906481.1\|WP_012360151.1\|391109_392015_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012360157.1\|395663_396914_+\|class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	2.60211e-60
NZ_LT906481.1\|WP_012360144.1\|383695_384163_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.13841e-67
NZ_LT906481.1\|WP_012360149.1\|388691_388982_+\|hypothetical-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	0.00850972
NZ_LT906481.1\|WP_012360155.1\|394358_394808_+\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	6.01999e-61
NZ_LT906481.1\|WP_012360158.1\|396957_398874_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_LT906481.1\|WP_012360143.1\|382498_383521_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|181169	PRK07921, PRK07921, RNA polymerase sigma factor SigB; Reviewed.	0
NZ_LT906481.1\|WP_050816643.1\|380608_381625_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	3.13945e-174
NZ_LT906481.1\|WP_012360148.1\|386806_388543_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.17143e-60
NZ_LT906481.1\|WP_012360145.1\|384173_385943_-\|methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.42929e-23
NZ_LT906481.1\|WP_012360152.1\|392023_393061_+\|myo-inositol-1(or-4)-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	1.50362e-68
NZ_LT906481.1\|WP_012360154.1\|393612_394137_-\|DUF3093-domain-containing-protein	gnl\|CDD\|378627	pfam11292, DUF3093, Protein of unknown function (DUF3093). This family of proteins with unknown function appears to be restricted to Actinobacteria. Some members are annotated as alanine rich membrane proteins however this cannot be confirmed.	5.1381e-48
NZ_LT906481.1\|WP_012360153.1\|393246_393546_+\|DUF4193-domain-containing-protein	gnl\|CDD\|379391	pfam13834, DUF4193, Domain of unknown function (DUF4193). This domain of unknown function contains four conserved cysteines and a conserved histidine, including a CXXXXH motif.	1.1122e-41
NZ_LT906481.1\|WP_012360142.1\|381687_382407_-\|metal-dependent-transcriptional-regulator	gnl\|CDD\|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	2.41669e-47
NZ_LT906481.1\|WP_012360146.1\|386020_386491_-\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	3.3842e-23
NZ_LT906481.1\|WP_012360147.1\|386551_386794_+\|DUF3039-domain-containing-protein	gnl\|CDD\|378609	pfam11238, DUF3039, Protein of unknown function (DUF3039). This family of proteins with unknown function appears to be restricted to Actinobacteria.	5.22765e-29
NZ_LT906481.1\|WP_012360156.1\|394924_395671_+\|DUF3710-domain-containing-protein	gnl\|CDD\|378867	pfam12502, DUF3710, Protein of unknown function (DUF3710). This family of proteins is found in bacteria. Proteins in this family are typically between 237 and 284 amino acids in length. There are two conserved sequence motifs: DLG and DGPRW.	1.23939e-67
NZ_LT906481.1\|WP_012360159.1\|399074_400118_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	3.16892e-94
NZ_LT906481.1\|WP_012360160.1\|400205_401351_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.46771e-110
NZ_LT906481.1\|WP_012360140.1\|379487_380612_+\|DUF4192-domain-containing-protein	gnl\|CDD\|379390	pfam13830, DUF4192, Domain of unknown function (DUF4192).	2.24311e-15
NZ_LT906481.1\|WP_012360151.1\|391109_392015_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	8.23606e-22

>NZ_LT906481.1|WP_012360149.1|388691_388982_+|hypothetical-protein
MSLAALILGVLALPAGLLPLIGIFVAMIALVVAIIALVRANRHATARTYPIVGLVLAILAMGLALITTKVATEFPEQCQGLSDDKLTQCVKEHRGN
>NZ_LT906481.1|WP_012360148.1|386806_388543_+|DEAD/DEAH-box-helicase
MKRTLRAWQQEALDLYQEQQPRDFLAVATPGAGKTTFALTLASMLLEKRVVQRLVIVVPTEHLKVQWALSAAAMGIALDAEFSNSSPFNNAFDGVAVTYAQVGMKPTKHYQVATAQKTLVILDEIHHAGDAKSWGDGVRLAYAHAERRLALTGTPFRSDDAQIPFVDYIEVPGTDGALESRADYTYGYSEALRDGVVRPVVFMAYSGHARWRSSAGEEFEARLGETLTPEQTARAWRTALDPKGEWIPAVLKAAHTRLLKLRTHIPDAGGLVIATDKTTARAYAKILSTISSTPVTVVLSDEVGASDRIKEFSASQDEWMVAVRMVSEGVDVPRLAVGVYATSAATPLFFAQAIGRFVRSRRKGESASVFLPSVPVLLDLASKLEKQRNHVLGVPKKDEEGWDDELLAQANREENEPDELTTYESIGAEAELDSLIYDGSTYGTTTLAGSAEEQDYLGLPGLLDAEQMRTLLQQRQADQVEARAREAEERKRREAEARRNGSAAGGMSGAEAHRRRVASEELPALRKELNALVNMTAARTGRPQGSIHNEARRNCGGPPTALCTAEQLRDRIAYLRDW
>NZ_LT906481.1|WP_012360147.1|386551_386794_+|DUF3039-domain-containing-protein
MSATSTSTLERPKVDEREQTQDDTPKFFHYVKKDQIVESAVMGRLVVALCGETFPVTKQAKPGSPVCPECEEIYQSLRKK
>NZ_LT906481.1|WP_012360146.1|386020_386491_-|DUF3099-domain-containing-protein
MSAAEKRAGRTRGTSATGARRFRRPGKRVDRITDAKKSQLEDWHHRRRLYLGLQIARIPVLVLAVILLWVTNNLMLGAVVAFISVPLPWVAVMLANESGEATKESEKVYKPGLVRANREALANSQLSQATSPQRQLEPSHVDSAGRHPVIDHKSED
>NZ_LT906481.1|WP_012360145.1|384173_385943_-|methyltransferase
MQSQFPNHDREKKAIPTVTTQPSSMQLTSQPAREALSSLLAASRERGLSTTLLEDVLGEAGLRSLNLANPAGALRSVRSYSRGHSNRDTGAAELVELFVLREPATRARWQELIGTDLTRRAIDARLIASLPGSADELQLRVDIRPYSFPHLFGGADGDAPSLGGEFLLASDPDAGLWPQEPTPDDHVPGLGNAPRSLLRAIPPADNPWLPSPRRILDLGCGGGALSLALQLAYPEAHVVGTDISGRALDFAAINGTQLAQAQGQLSTGVAAPESCIEWREGSWFEPVAGERFDLIVSNPPFVVQPPEVGHVYRDSGLGLDRATELVVSRAPEHLAPGGTAHILCSWAVSAEDSVASKMGRWLPAEGVRAYGLVREYVDPETYVTTWLSDEGIDPRSPEGRRKAGQWLHYLADNGVSHIALGFAHLRAIDGSTEVTVEQLPDTMVPGSPLGAEVAEWFIRSQWLADVSAEDVLAERFAVRPGVATELVRQADAEAGQGFRELSLRLARTDGPAWTHEIDAAVESILAGLNPEGLALEDVLGLYAAVTGPSEDESHVDYEEVLMERMLGIIVDLVRHGIVLPSSLVDWAER
>NZ_LT906481.1|WP_012360144.1|383695_384163_-|D-tyrosyl-tRNA(Tyr)-deacylase
MKAVISTVSQASVDVRDDSGEVRRVGEVSGPALLALIGSGRDDDADAWETMVRKIAELRLFPASGEPWGGQRDLSVEEVGGSVLVVSQFTLMGKTKRGRRPSWSEAMPGPAAEPVIEKIVHGLRNRGIHVETGEFGADMQVSSVNEGPYTVLVEC
>NZ_LT906481.1|WP_012360143.1|382498_383521_-|sigma-70-family-RNA-polymerase-sigma-factor
MSKSTNGSDSAPATSTKDDSSQQEQNTDRRRRRGNNENPSADLVRVYLNGIGKTALLTAEDEVELSQRIEAGLYAEQLLKSGEPLTRAKKRDVKILAREGKAARTHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYKKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLSRIKREMYQHLGREATYEELAEESGIPEDRIEMLMKQSRDPVSLDMPVGTDEEAPLGDFIEDSEAEDAEAAVVASLRHSDIRSVLATLEQREQDVITLRYGLDDGLPRTLDQIGRQFGLSRERVRQIEREVMAKLREGQRADKLREYAV
>NZ_LT906481.1|WP_012360142.1|381687_382407_-|metal-dependent-transcriptional-regulator
MRDLVDTTEMYLRTIYELEEEGIPPLRARIAERLEQSGPTVSQTVARMERDGLLSVEKDRSLKLSAEGRALATAVMRKHRLAERLLTDVIGLPWDKVHDEACRWEHVMSDEVEQRLVEVLDEHDTSPFGNPIPGLNFLTEQAADSTDFSQTAVAEDPNSVRAADLAAGEEHEAVVASFNEIVQVEGSLMKRLRKAGILPGVTVTVIPAEDHLILRIGSAEVAIPSELAHAVRVRSVSDV
>NZ_LT906481.1|WP_050816643.1|380608_381625_-|UDP-glucose-4-epimerase-GalE
MTEHNAIEPGSNVLVTGGAGYVGSVCTAVLIENGFHVTVVDNLSTGNRSAIHPKANFVEGDIADVASEVLADGDFAAVFHFAARSLVGESVEQPDAYWHHNVVTTLTLLDAMREAGVKNIVFSSTAACYGEPEQVPITEDMPTAPTNPYGASKLTIDYMLTSYAKAYDLAATSLRYFNVAGAYQQFGENREVETHLIPIVLQVALGHRESISIFGSDWPTKDGTAVRDYIHIKDLADAHVLAATSNVAGEHRIFNLGSGDGFSVREVIDTCREVTGAEIPAIEAPRRAGDPAVLIASSAKAIAELGWEPKLSDLTTVVSDAWRFTSALGDAAHSAPRP
>NZ_LT906481.1|WP_012360140.1|379487_380612_+|DUF4192-domain-containing-protein
MLGFTPHDSLVLIGLQPASKDRSPRDSSPGTRAAIHRTVTFQVGPVVRADLGGDSTGEAIETFCAALGAPILDTVPTDQCPQAIILVIGDTPARGVDVFTDTRTQLALAGIPVYTSHWAQEIADHQKWATYDLHTQLWVDEGTIPVQSANPVVLHAGVTNALNFAAREDMECWLDEQDPPLAGHLNPQCLDAALNQLLAKTEEILDGLTTVEDAMADQQLLGVIAGLCADPRSQAFVITASIGMPSPVIRSLLAATARHCVGDVRSNVLYVLTQVLVGNGEGVVAFHTARRAVCEATSARGWKDNQVLVIALKTGLALQIVKDKVAIATEVLNGKNPHEDISGDTRKIFTRVLDWDAVGHLRLLDSEGRELENP
>NZ_LT906481.1|WP_012360151.1|391109_392015_-|ROK-family-protein
MSTEQANSAEWAGITVGVDVGGSAIKAGFVDTRNHCLVGERFTAPTPQPATPEAVAGAVATLATQVLAQELGTGLPGASSLSRVQNLRIGVAIPSVVANQQARTAANIAHSWIGTRPAAVFDDALRKALSYGPSDRSALQVEWFFLNDADAAGISECGPCAAGEAADPEYSRLFLTFGTGIGSALFRGSRLYPNTELGHLTVLTDDGSPSAAEHWASAAVKARQHLSFPEWAARVSTVLNTYVALLRPQELILGGGISAESDRWLPKLELEEPSVRVSIARHFNSAGVIGAGLAASWGLRP
>NZ_LT906481.1|WP_012360152.1|392023_393061_+|myo-inositol-1(or-4)-monophosphatase
MLHISGICGGMTETLLLDKSTTNYVPEEIPGAANVRELQAAAEYVAARAAALVLRIRRERTEGEAVAGSVIELMGSAMPVAQTKSSAVDPVTEADRAAENFIREWLHAQFPQATVVGEEEGADDPAPDSSLAEAAGARLEWIVDPIDGTVNFVYGIPAFSVSVAAAFNGVPVAGAVVDAAHSHVFGACVGGPATVAPIDLKGEGVVVGEHKNISRQEGRKDAAQALVATGFSYDAERRQRQAHVLGNVLPHVRDIRRLGSAALDLCMVASGQVDGYYEHGLNGWDYAAGALIAARAGATVVIPTLDYTAESGLPIIAGVPGVQEELEKMLLSQGAGGSIEQLSLP
>NZ_LT906481.1|WP_012360153.1|393246_393546_+|DUF4193-domain-containing-protein
MATDYDAPRRSAEEELETDSLEGLKAAEKAEPAISDTDDGEIVEPFELPMEEVSGEELSTTVTPKQNDEFTCSECFLVQHRSRVGEKLSDTEFICVDCV
>NZ_LT906481.1|WP_012360154.1|393612_394137_-|DUF3093-domain-containing-protein
MDAANGASTPPPARPGEAAGTRVLYSESQRVPLSWWLAAIGVVAIIAWQAQMGRDWWWLLVAGVIAAAPAAWGLIALSRTKIEVFENSQGERIIRAGDAQLPASVVDRTLVIPPTAKQAALGRQLDPAAFVIHKGWIPTMAMLVLDDPLDPTPYWLVSSKNPQKLLEALGRPIY
>NZ_LT906481.1|WP_012360155.1|394358_394808_+|dUTP-diphosphatase
MSSPLEIFQIDPSLPLPNRAHPEDAGIDLYSAEDITLKPGQRSLVGTGIAMAVPVGKVGLVHPRSGLAVKKGLSIVNAPGTIDAGYRGEVKVNLINLDPEETINISRGERIAQVLIQNVSLCEVVTVDSIDQLGETTRGSGGHGSTGTR
>NZ_LT906481.1|WP_012360156.1|394924_395671_+|DUF3710-domain-containing-protein
MWPFSKKKNEPSGVEPSTPHSQAEQEVPGAADGAAAGPTENEHPVQGEDFGPFDGDTLDYREYNFSDFAKGGLDLGSMMIPVPHEAEVQVEMGDDGPQMLHILTPFGRVTPVAFAAPTTGELWDNTVPTLIEGMAADGLEATTEEGPWGAEIVAQSGDGTLRVIGATGPRWMLRMTLAGPQESAEQMAALGREIIARTFVVRGTDPIPAGDPLPVQLPQAMVEELARHLQEKQNTPAQPQMPNKDGND
>NZ_LT906481.1|WP_012360157.1|395663_396914_+|class-I-SAM-dependent-RNA-methyltransferase
MTSPETITLDLDQPGHRGVVIGQHDGQIVFVRGGLPGEKGVEVALDAAKKNGKQRFRTGEALTIDQPSPHRVPGQCDAAAVGAGCCDLDFVDAEGSLDFKQAVVIDQFRRLGKFELPQAFLDAHVRAASLWPFTHYRHRVRLGVDAEGQTGLRKPKSNDIVPVDEVDCAQWLPGLADGVASLNPSPGSEVVVGVGRDGKRSVVELKKTRRGRKRRVLDGEGEVTHSHFGVTWKVPVDAFWQSHISASAYYARWVADRLNGDLHTVWDLYGGCGALSAGLLGSARNIEIVDVASSATHAGRDAFAADRESRAEGAGTAVRFRSSDVGAWLEKLDEVADLDAVVLDPPRTGAGADVIQNVAQHRPPRVIHIGCDPATAARDAGMWRDAGYELREMEIVDAFGLTHHVETLMYFEAAGE
>NZ_LT906481.1|WP_012360158.1|396957_398874_+|1-deoxy-D-xylulose-5-phosphate-synthase
MWDGEKLSSMGILENISSPADLKLLEEGKLDQLAQEIREFLIEKVSATGGHLGPNLGVVELTMALHRVFDSPSDPLIFDTGHQAYVHKILTGRRDLFDTLRQKDGLSGYPDRAESPHDWTESSHASASLSYADGLAKAFELSGQTHRHVAAVVGDGALTGGMCWEALNNIATGKKRSIVIVVNDNGRSYSPTIGGLAENLAALRLQPAYDKVMESGKNTLGRMGWVGDRAFQLISGLKEGVKHSILPQEMFSDLGLKYIGPVDGHDIGQVENALRYAKDYGGPVIVHTITHKGKGFDPAENDEADQMHATGVIDPVTGVPKEASKPGWTQVFSSHLIERAGERDDVVAITAAMAGPTGLAEFGEVYPQRTFDVGIAEQHAVTSAAGLALGGLHPVVAVYSTFLNRAFDQMLMDVGLLGLGVTFVLDRAGITGPDGASHNGMWDMSITGIVPGIHVAAPRDGAQLRLALDRCLDVDDAPTVVRFPKGSVPADISAVRQESSYDVLFEHSADDGDGAKKLLVINYGALVGQSRAAAEAAKSKGWEAAVVDPHWVYPVSEQLVELANDADLVVTVEDNGIHGGAGSALQAALSAAEVDTPVRLLAVPQEYLAHASRGEVLEEIGLDVATVERRVTGWLDRF
>NZ_LT906481.1|WP_012360159.1|399074_400118_+|ABC-transporter-substrate-binding-protein
MLVRSFFGIIPAVPRCRGWPGRTRKSKRLKISHALVAAAAGFSLILTGCAAENNSAENNSASSQQNNADRTYTLEAENGTIELESEPKRIVVLDYASLDTLAALGEKDRVVSTAKAATMPKAAEGIEANAGSLKEPDMEAIAAADPDLILIGGRQAKMLKEFEKIAPTANMTINYDHYTIDSSLERVEALGKLFGKEAEAKEKADEIRDRVKKIADSVPADKKEAAVLMTSGGEISLYGADSRFGLVFNDLGFTPAGNIDSDSAHGENASFELLKKINPKTIFVIDRDAAIGQEGHSAKATLDNELVKQTDAAKEDRIYMLSGADWYLNGGGIDGLNTMLDDIEQAL
>NZ_LT906481.1|WP_012360160.1|400205_401351_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MGTNGSVSTLTRQDGAPLSHAPQTSYRDQVGAQSVAIDAVAGNNPAATAEPTDRTTPRSRGPVYAIILAGVLVVLSLLSLMLGAADADSSVVAVSRIPRTLAALLAGSALAMGGLIMQLLARNRFVEASTVGSTESAMAGLLVVALLLPGAPMWAKLGMASLTALIGTIGFLVIVSRIKVRTGFTVPLVGIIYGGIIGAATTFFAYSFDLLQSLGAWQLGSFAGVLRGRYELLWLVAVLALAAYVLADRLTLLGLGHDLAKGVGVRVKVVEYSAIVIVAVIAAVTVTVVGAIPFIGLIVPNLVRARIGDNARKALPWVAACGAAMTLGGDILSRIIRYPYEIPVGTVLGVLGAAVFIYVLIRGARIQSSTKPKLFRRARRG

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Crispr_ID: NZ_LT906481_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_3

830439-830522

Orphan

Consensus_repeat	Method
CGGCGTTCCCCGGCGCGCGGGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT906481_3

>merge|NZ_LT906481|3|830439-830522|CRISPRCasFinder
CGGCGTTCCCCGGCGCGCGGGCTGTATTTGGTGCGGCTTGGGCGCGTGTCGGCGAGACTACGGCGTTCCCCGGCGCACGGGCTG

>NZ_LT906481|3|3|830439-830522|CRISPRCasFinder
CGGCGTTCCCCGGCGCGCGGGCTG	TATTTGGTGCGGCTTGGGCGCGTGTCGGCGAGACTA
CGGCGTTCCCCGGCGCACGGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012360535.1\|830604_831351_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226425
NZ_LT906481.1\|WP_012360541.1\|839380_840721_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_LT906481.1\|WP_012360526.1\|821913_822861_+\|TDT-family-transporter	unknown	unknown	gnl\|CDD\|187760
NZ_LT906481.1\|WP_012360540.1\|835599_839256_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237613
NZ_LT906481.1\|WP_012360524.1\|818531_819746_+\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|235738
NZ_LT906481.1\|WP_012360529.1\|824064_824859_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LT906481.1\|WP_012360538.1\|832891_834115_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_LT906481.1\|WP_041628493.1\|824855_825218_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_LT906481.1\|WP_012360533.1\|827369_828821_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_LT906481.1\|WP_012360539.1\|834169_835426_-\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_LT906481.1\|WP_012360542.1\|840782_841619_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_LT906481.1\|WP_012360537.1\|832322_832868_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_LT906481.1\|WP_012360534.1\|828889_830407_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012360532.1\|826031_827024_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
NZ_LT906481.1\|WP_012360543.1\|841773_844236_-\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_LT906481.1\|WP_012360544.1\|844258_844450_-\|SPOR-domain-containing-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012360525.1\|819894_821352_+\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NZ_LT906481.1\|WP_148264199.1\|817126_818098_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_LT906481.1\|WP_012360528.1\|823348_824068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366543
NZ_LT906481.1\|WP_012360536.1\|831443_832268_-\|fructosamine-kinase-family-protein	unknown	unknown	gnl\|CDD\|225547

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012360535.1\|830604_831351_-\|AAA-family-ATPase	gnl\|CDD\|226425	COG3910, COG3910, Predicted ATPase [General function prediction only].	2.18214e-65
NZ_LT906481.1\|WP_012360541.1\|839380_840721_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	0
NZ_LT906481.1\|WP_012360526.1\|821913_822861_+\|TDT-family-transporter	gnl\|CDD\|187760	cd09320, TDT_like_2, The Tellurite-resistance/Dicarboxylate Transporter (TDT) family. The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes members from all three kingdoms, but only three members of the family have been functionally characterized: the TehA protein of E. coli functioning as a tellurite-resistance uptake permease, the Mae1 protein of S. pombe functioning in the uptake of malate and other dicarboxylates, and the sulfite efflux pump (SSU1) of Saccharomyces cerevisiae. In plants, the plasma membrane protein SLAC1 (Slow Anion Channel-Associated 1), which is preferentially expressed in guard cells, encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. SLAC1 is essential in mediating stomatal responses to physiological and stress stimuli. Members of the TDT family exhibit 10 putative transmembrane alpha-helical spanners (TMSs).	1.67945e-81
NZ_LT906481.1\|WP_012360540.1\|835599_839256_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237613	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NZ_LT906481.1\|WP_012360524.1\|818531_819746_+\|ornithine-cyclodeaminase	gnl\|CDD\|235738	PRK06199, PRK06199, ornithine cyclodeaminase; Validated.	0
NZ_LT906481.1\|WP_012360529.1\|824064_824859_-\|hypothetical-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.58214e-20
NZ_LT906481.1\|WP_012360538.1\|832891_834115_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.98291e-23
NZ_LT906481.1\|WP_041628493.1\|824855_825218_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.73046e-28
NZ_LT906481.1\|WP_012360533.1\|827369_828821_-\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_LT906481.1\|WP_012360539.1\|834169_835426_-\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	8.99491e-70
NZ_LT906481.1\|WP_012360542.1\|840782_841619_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	3.50294e-148
NZ_LT906481.1\|WP_012360537.1\|832322_832868_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	2.95483e-21
NZ_LT906481.1\|WP_012360543.1\|841773_844236_-\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_LT906481.1\|WP_012360532.1\|826031_827024_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	3.24007e-76
NZ_LT906481.1\|WP_012360525.1\|819894_821352_+\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NZ_LT906481.1\|WP_148264199.1\|817126_818098_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	2.74829e-45
NZ_LT906481.1\|WP_012360528.1\|823348_824068_-\|hypothetical-protein	gnl\|CDD\|366543	pfam01262, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain. This family now also contains the lysine 2-oxoglutarate reductases.	0.00838886
NZ_LT906481.1\|WP_012360536.1\|831443_832268_-\|fructosamine-kinase-family-protein	gnl\|CDD\|225547	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown].	2.54698e-34

>NZ_LT906481.1|WP_012360534.1|828889_830407_+|hypothetical-protein
MKQPQPTPRRESLRETSASNVASSSTSATTGAVSDGAASDTATSGGTTSGTTTSRPATVERSATVGRSVTASRPARPISQSPIAVWVCWLLANIFQLWIVVTYRWGTEDLSYYRNGSLLSGPFGEHIVGIGGSPTPLSEYPDVGVWPIRAVKAIADVLVPGSERGFFLIFALACCLLGALFTGYLLRLGRFLGAWTWVGVSFAIGPILLTRLDLIPGLAVGVGVAVVVSHPRVAGALLAFATASKLWPGVLAVALVDRWNARGMWQRLGFFALTLAVLVGITTATEGFERVISPLTYQDVRGLQVESVAATPFTFLSAFDDRWEINLSSSKSYEVSGPGVELAMHAATAVMALTLLLGVYIALRHFLRGGWNTERALAAATMLVALLLLGNKVFSPQYVLWLAPLICLAIPARIGRHGVRGEGARWRGVLLDTSEGAPLVLGVLTVIIAGLSFLVFPISYGWLVSSGPAGIPASILVVRNLLCILVAVIAVRWWLRVSRLGAQVV
>NZ_LT906481.1|WP_012360533.1|827369_828821_-|threonine-synthase
MDYFSTRDSSRTPAKFSDILLGGLAPDGGLYLPAEYPQLSDETLTEWRELLAEKGYAALAAEVLKIFVDDIPAEDLEAITARAYTTKAFAHEEIVPVTELEDGMYLGHLSEGPTAAFKDMAMQLLGELFEYELARRGETLNILGATSGDTGSAAEYAMRGRQGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADADFKRDNRIGAVNSINWARLMAQVVYYISSWLKLTESNDQKISFSVPTGNFGDICAGHIAKQMGLPIERLIVATNENDVLDEFFRTGEYRVRSSAETLKTSSPSMDISRASNFERFVFDLLGRDADRVADLFGVKVREGGFSLADEPAFPEAAATYGFASGTSSHADRVATIRDLHERLGVIIDPHTADGVKAAQQWRDQVEGPIVVLETALPVKFAETIEEAIGEVPEVPERFAGIMDADRHVVDLPNDAERVKQYILDSIAETKEVEN
>NZ_LT906481.1|WP_012360532.1|826031_827024_-|2-dehydropantoate-2-reductase
MALKIGFLGAGALGAYYGGRMAETGQEVGFVARNETLEALRTTGVTLIDDNEETSVVSNVAAAESFEELAETMGGLDVIINATKSLPGNDSFPDVSGIKTADGKQVPIVTLHNSVEVPQLVAEQYGEQNVIPGIVRGYFVHKGPATAQFLPGMKVLNIGTFDRAQDSHAYRVACELSEALVAAGFKSEVWDDIFVEIWSKAMFVTPTGALGALAHQPLGYLREEGAEGKPGLRNTLEGLMREYEAAARAHGVGLPEDIVAKTMALTDKQPDSATSSMQRDIRDGLPNELDAQVGAVRRMAARVGVPTPLHDMMQGALEGQIKAQAEGRQG
>NZ_LT906481.1|WP_041628493.1|824855_825218_-|GntR-family-transcriptional-regulator
MQTDPADPRPIYIQIAEDLKSMILSGELAIDQRAPSTKELSEFYQVNPTTAAKAMTELSQEKLVEKKRGLGMFVTQGARERIRSERKGAFQRTYIDPLKTEAVALGLSLEEIIAMLKEEK
>NZ_LT906481.1|WP_012360529.1|824064_824859_-|hypothetical-protein
MSIYGVIGPNGAGKTYYLRTLSQNPGTALAQAAPDAALYGATPREYFAIAKTGWSELDISRAESLLDFPATTPMKSLSLGQRQMVITAAALASGQPALLFDEPFNGLDVEFRNRLRSMFIDAMTDDAVADATITDGGDVVPPKDPAPERTIVLTSQHSQDLAGLVETLIVIHNHEPHGPFDVDQLRTRHPVLRGMTEQVGLIAADLPVFSRKTLGERSELVLAAPLSASAAQHARTVGVEVSYLDPAELIDLASTSAYIERSAQ
>NZ_LT906481.1|WP_012360528.1|823348_824068_-|hypothetical-protein
MTLGVFSATNPRTFLGVSAGAMLLAAFGGLVVSRGTENTMLAVLVLAGLFAVTAARSVRLRDFGVSAARWVRSAILSALLVSLLAAALVTLMIIVSDRNPTFYQDFASFTVHAHGYEVADGVRYASDGPGMPVGTFALTGLCVFLSFLMGTFAGTALGAVFGARGTRACVVAVLGGFVAAYGLGAVLMVLDVNIAAPWPGVPMFAVVVCVVSELVLVWALRTHRRSMPAVVPEMPGVVH
>NZ_LT906481.1|WP_012360526.1|821913_822861_+|TDT-family-transporter
MPCVTKKFRELPPPGPAWGGSLMGTSIVARLLVEKYIMIGASIFAAIACVILVALTIGFARYRQPSFQRTTVAEWSMFFIGILALGAALSGLTDVPTYRLIGFWIGAPVTTVTWAIQLSRFSGKPRFTWGLPLVGPMISASVSGWLARDYGQMYHVMGTAFFVMSLLTAVPVFAHVYWAAWHGEVDLSGPNSATAWVPLGVIGQSTTAMQILYPSTISVYYGYVALVLAVPLAIFAMVTFYPNVARWADYSPAWWSCTFPPGTISMGGHQVALVNGSQWLDAVALAIPFLLLAHWTACSTRFLSWVAEGRRGRAA
>NZ_LT906481.1|WP_012360525.1|819894_821352_+|type-I-glutamate--ammonia-ligase
MGKFKPGSEHTTPEGIQKFIRDEEIRWVDVQFTDVPGIEQHLTVPASAFDEDAIQEGLAFDGSSIAGYTSVDNSDMMLLPDLETAFVDPFRKSKTLNVKFFVHDPHTREPFSRDPRNIARKAEQYLAELGFADTCNFGAEAEFYIFDSVRYDSTTNKSFHEVDSVEGWWNSGAKENPDGSRNLGHKVRTKGGYFPTAPYDHMQDLRDEIGEHLQDVGFDVERSHHEMGSGGQQEINYRFNTLLHAADDMQTFKYVVKNTAKFNQKSATFMPKPLAGDGGSGMHIHQSLWKDGQPLFHDENGYGGLSDMARYYIGGILKHAGAVLAFTNPTMNSYHRLVPGFEAPVNLVYSQENRSAAIRIPITGSNPKAKRIEFRAPDPSGNPYLAFTAAMMAGLDGIKNRIEPGDPVDKDLYELPPEELKGIPTVPYSLDGALEALEEDHDFLTAGNVFTEDLIEAHIRYKFDEEIMPARLRPTTQEFELYYDC
>NZ_LT906481.1|WP_012360524.1|818531_819746_+|ornithine-cyclodeaminase
MERIEYPLTSSSTENSNTTDQASANPTRIDFLYLNEEEMVDAGVTDLAACVETMEETLILLADGDYRMAGASANSHGAQINFPDNPEHEGMPANGPDRRFMAMPAYLGGRFRNSGVKWYGSNADNRQNDLPRSIHLFILNDAVTGAPLSVMSANLLSAYRTGSVPGVGVKHLAVENAETVGIVGPGVMSRTILGAALTQRPSIKNVKIKGRSAGSTQRAADWIKENYPQLEDVRIVETEEEAIRDSDIVITGTSTSPDGPSGFPYLKKEYLKPGALLLMPAAARLDDEFVQSDDCRLVVDYTGLYEEWFNENGPDVTYERLLGIPGNRWWDMKEEGTLPADKLVNIGDIASGKAPGRQNDDEIFCYSIGGMPVEDVAWATDVYENALKKGIGTKLNLWDTPRLT
>NZ_LT906481.1|WP_148264199.1|817126_818098_-|CoA-transferase
MEGIVVPLPVPPTVLRGVNVLSLAPNLPGPIAARRLADMGAKVTKIEGPTGDLMAQAAPKYYEWLCTGQDVVQLNLKEEADRGTLHELLSSCDVLITSSRPSALARLGLSWDELHAAYPRLCQVAIVGHSGDDADLAGHDLTYQAHAGTLLPPAMPTVPVADLAGAELAVQAALALLLGRSAGEGADGSGVGGQGAEGQGSDGQGAGGTGGGGYHEVALADAAEAFALPAQFGLSAPGGLLGGALPGYRIYEAAPAGGTPTHVAFAALEPHFMARAMQLLGVDGTEEQFAATFKTKTAAEWEAWGIEQDVPIAEVRGAGRARN
>NZ_LT906481.1|WP_012360535.1|830604_831351_-|AAA-family-ATPase
MRSTLPLRSIRLRHVLREPSFWVHQMPVVADLRERGRLEFSSPVTVLSGENGVGKSTLLEALALKLGFGATGGRLDDPFKQASTGTESPLVDDLVADLSQPLLRGYFLRAESHLTQVLHNQSPMEAAGRNRLGMDWDITARSHGESIFDIFHEYIDGAGLYLLDEPEAGLSTIRQMTLLAQIAEEVRQGAQFVIATHSPILMAFPGTTIYEIGDHGIRTTALEHTEAFTALSEFFADPHGTVGFLLGE
>NZ_LT906481.1|WP_012360536.1|831443_832268_-|fructosamine-kinase-family-protein
MSTFTKHNPGRTGAWEAAGLEWLAAARDGGGPAALDGDGPGAAQGARVVGVVERTPDTIVLERVQETRPTPEAAEAFGRELAATHAAGAPCFGAGPVNAAGEPWEGTGYQGPNEHLLPLPLGRRESWGEFYANLLEPLIEPAWGGLSGEDQQAVRALLERLRDGELDVPGSQTPARCHGDLWAGNVLWSPEGAVLIDPAAHGGHPETDLAALQLFGIAHQERILGAYQEAAGWDSSWRQRVPLHQLHLLFLHVAVFGGSYVSQAMTAVHRSLAL
>NZ_LT906481.1|WP_012360537.1|832322_832868_-|VanZ-family-protein
MSHDSSRPARALQWTALGAYVAVVLALTVGKSFYQIGLLWKPENQRVRELLLVPFQLVRESPTIFGVVFDYVGNVAFFVPLGMLLVVVFFGVNRPVWRAVWIAALLSLGIEVCQYVFSVGRTSVDDWWCNTLGAFLGAYFAVKMGPRWHKVWVWLALALGVVFAVLVGLGDRLGDPEKVVG
>NZ_LT906481.1|WP_012360538.1|832891_834115_-|MFS-transporter
MGIWVTGVFVYVMAVLGRTSLGVVSVDALDQFQINAGQLAVFTTVQLATYAFAQIPAGLLVDRLGPRKMMLYGAVLMAVGQVLLALTTSFPVAVLARVLVGAGDATAFLSVMRIIPAWFPLRTAPLFGQATGAVGQLGQFLSAVPFLALVGSAGWSIGFVSLSAVGLLVGIVAFAVVWDTPGELAEGRRGGVEKPEDGPGPSPMVAVKYALANRTAWHGFFIHWSGLSLLVVFTLLWGMPIMTLGMGMDKATAGWAISASTLAMAICGVLVGFLSARLGRSRWKAIVVGTSLGAAAWLLFFISPEPRTAAAAFVMNVVMGVVSPLANIGFDSVREECRREFVATATGLANMGGWLAGMAANQAMGVYLTLAAPNGEYTWAEFRFGWFVVLGVWALGLVGVVATRPRR
>NZ_LT906481.1|WP_012360539.1|834169_835426_-|dicarboxylate/amino-acid:cation-symporter
MNRIPLIVRLIAGIVIGIVVGAICRSADAEWPIRAFATFNQIFGTFLSFVIPLIIFGFIAPGIGSLGRGAGKLLGLSLGVAYSSTVIAGLLALLTSFGLFRFLLDGAQGLMETDNPEDALVAAYTNIEIPPVMDVMTALILAFVVGLGMTRLTDRTMYQLTDDFRQIIERLLSSVVIPLLPFHVMGVFGNLTYAGVVANILAVFAKVFIMVLVLHWGMLVFQYCIAGAVSSKNPFTMLRTMLPAYVTALGTQSSAASIPVTLRSAKSAGLHPRFADFLIPLNANIHLSGSIITITACSMAVWSLAHGEMISFGQMIPVILVLGIMMVAAPGAPGGAVMTALGVLESMLGFDQPMLTLMIALYLAQDSFGTAANVTGDMAVGRVVQGLASRVKGIEVPEDDPELQVGAAAAAENEERDA
>NZ_LT906481.1|WP_012360540.1|835599_839256_-|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MTRSQGLPRSSRSDVPSPRVLGLRRERAVEDLEMLGWTGPEHTSLLWTLAAAGSSDLALNNFVRLVDALRAAEEDGGLPAPGAAHPESMAAAAAAQAGADAGQQGSSTPQQDAAQADGSQVDPAVAVPVGQVAQFTDAKADTLLAAVEENPNFRRRIFAVLGASTALGDHVVANPGTWVDLAAPMPSRQEMMDAMLAAVGATPVEGAGELTFKAAITGSEADSALMVAYRNLLARVAAIDLASTMVERGHTPPKPLGFEALSLALTDAADAGLTAALAVACSMVYGKPGAENEKQPARLAVLAMGKCGAQELNYISDVDVIFVAEPADARAMRWAGEFINIGSRVFFEVDAALRPEGKRGALVRTLDSHVNYYRRWAKTWEFQALLKARPMSGDLELGRDYCEAISPMVWSAAEREDFVPDVQAMRRRVIENVPADLRERELKLGEGGLRDVEFAVQLLQLVHGRTDENLRVPATVSALRQLVDGGYVGREDGQVLIRCYEFMRLLEHRLQLHRLKRTHTLPEEDDIQERRWLAKTSGRVRSRDSSGAQRSLVEQLELDVRQSALQIQNLHRKLFYRPLLSSVVGMDADAVRLSPEAAKRQLAALGYESPQRAFEHLRALADGTTRKHKLQAIILPSLLEWLSATVDPDAGLLAYRKLSEAAMDRSWFLRLLRDENIVGKRLMFLLGTSPFLADLLLNSIDSVKLLSDGAKGPKLLDQEPAVVTHSLVAAASRQRDPDKAIGVARALRRAELSRIAAADLLGLMSVEEVCESLSWVWDAVLEAALQTEIRAWEDEHQTNAPATISVIGMGRLGGAELGYGSDADVMFVAEPVGSVASVAQEGDGAEAAVGGKDDVDVEKTGVDNSGAETQGSGADAVDSDATGSDVAGSDAAGSGVEAVDPLKWAITICESVRRRLGKPSQDPPLEVDSNLRPEGRNGALVRTLASYERYYAEWGETWELQALLRATWIAGDKNLGMRFLRMIDQFRYPAGGATAKQVSEVRRMKARVDSERLPKGADKNLHTKLGRGGLTDVEWTAQLLTMQHCDKEHLRNTSTLGVLKEMAAEELISEADALTMREAWITATKARNALALVRGKRKDQLPASGKPLAQVAAAAGWPIEESQEFLDDYLKKTRRARTVVDRVFWGEDIVEDAEGSEFDHMDQLDWGADHHPEDSRAFGIGDQVELDKVLNADMLDRDWAADRRDEVVRAFRGRRPRL
>NZ_LT906481.1|WP_012360541.1|839380_840721_-|glutamine-synthetase
MSSQQEFVLRTLEERDIRFVRLWFTDIQGYLKSVAVAPAELEGAFAEGIGFDGSAIEGFSRAFEADTIAQPDPSTFQILPFGGEQDGYLSARMFCDITMPDGQPSWADPRQVLRRQLAKAAEDGFSCNVHPEIEFFLVKSIDTDGQPPVPADNGGYFDQAVTDNAPNFRAEAINSLERMGIPVEFSHHENGPGQQEIDLRFADALTMADHVMTFRYLIKQVARRNGVRATFMPKPFSQYPGSAMHTHISLFEGEDNAFHDPDDEFRLSATAKSFIAGILEHAPEFTAVTNQWVNSYKRLSYGEEAPRAASWGASNRSAMVRIPMYTQHKAATRRVEIRSPDSAMNPYLGYAVMLAAGLKGIREGYELPAPAEEDVSLMTRRERIAAGFRDLPTDLDYALRKMERSEMVAEALGEHVFEFFLRNKWQEWHAYQSQISPWELRHHLEF
>NZ_LT906481.1|WP_012360542.1|840782_841619_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MARQDSPRGYMVPTKQVRISDLTARKASGEKWAMLTAYDYSTAAAFAEAGVECLLVGDSAANVVFGYDQTQQVSLEEMIFLAAGVVRGAGNALVIADLPFGTYEASDEQCVKSAAEMMRRSGAAMIKIEGGRRMAPRIKALTEAGIPVCAHIGFTPQSVNQLSGFKVQGRGDSAAQLLDDMAAVTEAGAEMVVLEMVPADVAKQATEQFPIPTIGIGAGPDTDAQVLVWHDMVALPEHGHRPKFAKQWAQVGASLTDAAASYKREVAEGTFPAEEHCF
>NZ_LT906481.1|WP_012360543.1|841773_844236_-|HAD-IC-family-P-type-ATPase
MSSTEHSTSEHGSTKHGTAEKPDLSGLTTAEVEERTRAGRTNKATRTTGRTTWEIIRANVFTRINAMLGVLCVIVLATGSWINAAFGLLIIANSAVGIIQELRAKRTLENLKILSESRPRVIRDGEEKEVAQSEIVEGDLIRVGSGDEIVVDGPLLSGSLSMDESQLTGEADPVRHNPGDELLSGSFVKHGSGVFRAEKVGGESYAARLAAEASDFSLTDSVLMSGINSILRVITWLLIPTGLLTIFTQLTRTDAPIRESILSMAAALVPMVPEGLVLMTSIAFAVGIVRLGKYKALVNELVAIEGLARVDTMCTDKTGTLTSNEMELEAVVDEDGDEASTETLRDLRRLFASQSDLNNTAEAIVQGLDEWAERAAEEEGSEAADSSQPHAFEGSEIPFSSAYKFSGFRVTDGPTFVLGAPDVLLDQGTPAANVAAKEEADGRRVLAFGRALDEVEDPDEDGANVTTPELGDPVLIVLRQKLRPDVAETLAYFEHEGVDVKIISGDNPGSVAAVAKEATGEQLSSIDAREIAPEDMEQAVLDSEVFGRVKPEQKQAMVEALHAHGRTVAMTGDGVNDVLALKKADIGVAMGSGSAATRSVAQLVLLNDRFSSMPHVIAEGRRVIGNIERVANLFLTKTVYSVVLAMVVAVAGVTFPFQPIHVTITGWFTIGIPAFILSLAPNTERPKDGFVRRVLSLAIPGGAIVGLGSVIMWLVIYPGDGASVTEQRQAGTAVLLALIIMGLWVLNIVARPMKTWKWALWFGCIGGYLVLFLIAPIREIVLLDIGNTRLMITGAVVGLCGAVVIEFSQFLARRFLLHQD
>NZ_LT906481.1|WP_012360544.1|844258_844450_-|SPOR-domain-containing-protein
MAEEKWYFDTKTGEVTKGKSSGWDTRMGPYDSEEAARQALSTAQQRTEAADAYDEQDDWDNED

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Crispr_ID: NZ_LT906481_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_4

1121361-1121458

Orphan

Consensus_repeat	Method
TTCGCATCGATCAAATCGATAACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT906481_4

>merge|NZ_LT906481|4|1121361-1121458|CRISPRCasFinder
TTCGCATCGATCAAATCGATAACGCTGTGCCAGCTACTTCGCATCGATCAAATCGATAACGCTGTGCCAGTTACTTCGCATCGATCAAATCGATGACG

>NZ_LT906481|4|4|1121361-1121458|CRISPRCasFinder
TTCGCATCGATCAAATCGATAACG	CTGTGCCAGCTACTTCGCATCGATCAAATCGATAACGCTGTGCCAGTTAC
TTCGCATCGATCAAATCGATGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012360801.1\|1131531_1132182_+\|DUF2771-domain-containing-protein	unknown	unknown	gnl\|CDD\|378520
NZ_LT906481.1\|WP_012360802.1\|1132249_1132633_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_LT906481.1\|WP_012360782.1\|1110859_1111978_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274934
NZ_LT906481.1\|WP_012360783.1\|1112054_1112939_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
NZ_LT906481.1\|WP_041628618.1\|1127188_1128043_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_LT906481.1\|WP_012360785.1\|1113810_1114701_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|223729
NZ_LT906481.1\|WP_012360787.1\|1115782_1116967_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_LT906481.1\|WP_012360789.1\|1117894_1118938_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LT906481.1\|WP_012360784.1\|1112952_1113750_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236115
NZ_LT906481.1\|WP_012360795.1\|1124949_1126152_+\|DUF3071-domain-containing-protein	unknown	unknown	gnl\|CDD\|378619
NZ_LT906481.1\|WP_012360794.1\|1123620_1124760_+\|phosphoserine-transaminase	unknown	unknown	gnl\|CDD\|130433
NZ_LT906481.1\|WP_012360800.1\|1129740_1130559_-\|DUF3027-domain-containing-protein	unknown	unknown	gnl\|CDD\|378605
NZ_LT906481.1\|WP_012360793.1\|1121955_1123239_-\|citrate-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_LT906481.1\|WP_012360796.1\|1126177_1127149_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012360798.1\|1128048_1129533_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_LT906481.1\|WP_012360790.1\|1118943_1120044_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LT906481.1\|WP_012360786.1\|1114847_1115786_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213236
NZ_LT906481.1\|WP_012360791.1\|1120056_1121010_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NZ_LT906481.1\|WP_012360788.1\|1117088_1117898_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_LT906481.1\|WP_012360799.1\|1130542_1131415_+\|glutaminyl-peptide-cyclotransferase	unknown	unknown	gnl\|CDD\|368283

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012360801.1\|1131531_1132182_+\|DUF2771-domain-containing-protein	gnl\|CDD\|378520	pfam10969, DUF2771, Protein of unknown function (DUF2771). This bacterial family of proteins has no known function.	5.01725e-65
NZ_LT906481.1\|WP_012360802.1\|1132249_1132633_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.55099e-19
NZ_LT906481.1\|WP_012360782.1\|1110859_1111978_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274934	TIGR04036, family_protein, putative luciferase-like monooxygenase, FMN-dependent, CE1758 family. This tightly conserved subfamily of the bacterial luciferase-like monooxygenase (LLM) family, with members showing > 60 % pairwise sequence identity, includes proteins from both species with and species without the ability to make coenzyme F420. Therefore, the like cofactor is FMN rather than F420. The presence of three members in Kineococcus radiotolerans SRS30216 and two in Saccharopolyspora erythraea NRRL 2338 suggest closely related (subfamily) rather than exactly conserved (equivalog) function. Gene neighborhoods around members are not conserved. [Unknown function, Enzymes of unknown specificity].	0
NZ_LT906481.1\|WP_012360783.1\|1112054_1112939_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	1.83024e-38
NZ_LT906481.1\|WP_041628618.1\|1127188_1128043_-\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	2.33537e-58
NZ_LT906481.1\|WP_012360785.1\|1113810_1114701_-\|aldo/keto-reductase	gnl\|CDD\|223729	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only].	2.57778e-121
NZ_LT906481.1\|WP_012360787.1\|1115782_1116967_+\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	6.10616e-24
NZ_LT906481.1\|WP_012360789.1\|1117894_1118938_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.48726e-60
NZ_LT906481.1\|WP_012360784.1\|1112952_1113750_-\|enoyl-CoA-hydratase	gnl\|CDD\|236115	PRK07854, PRK07854, enoyl-CoA hydratase; Provisional.	1.11576e-113
NZ_LT906481.1\|WP_012360795.1\|1124949_1126152_+\|DUF3071-domain-containing-protein	gnl\|CDD\|378619	pfam11268, DUF3071, Protein of unknown function (DUF3071). Some members in this family of proteins are annotated as DNA-binding proteins however this cannot be confirmed. Currently no function is known.	9.59853e-39
NZ_LT906481.1\|WP_012360794.1\|1123620_1124760_+\|phosphoserine-transaminase	gnl\|CDD\|130433	TIGR01366, Putative_phosphoserine_aminotransferase_PSAT., phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. [Amino acid biosynthesis, Serine family].	0
NZ_LT906481.1\|WP_012360800.1\|1129740_1130559_-\|DUF3027-domain-containing-protein	gnl\|CDD\|378605	pfam11228, DUF3027, Protein of unknown function (DUF3027). This family of proteins with unknown function appears to be restricted to Actinobacteria.	8.08819e-90
NZ_LT906481.1\|WP_012360793.1\|1121955_1123239_-\|citrate-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_LT906481.1\|WP_012360798.1\|1128048_1129533_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.07037e-120
NZ_LT906481.1\|WP_012360790.1\|1118943_1120044_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.27949e-72
NZ_LT906481.1\|WP_012360786.1\|1114847_1115786_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213236	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter. This subgroup is related to the subfamily A transporters involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two integral membranes. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	7.98223e-99
NZ_LT906481.1\|WP_012360791.1\|1120056_1121010_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	3.12147e-46
NZ_LT906481.1\|WP_012360788.1\|1117088_1117898_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.01137e-112
NZ_LT906481.1\|WP_012360799.1\|1130542_1131415_+\|glutaminyl-peptide-cyclotransferase	gnl\|CDD\|368283	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase. This family of enzymes EC:2.3.2.5 catalyze the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.	2.77917e-107

>NZ_LT906481.1|WP_012360791.1|1120056_1121010_-|iron-siderophore-ABC-transporter-substrate-binding-protein
MFLKKTLSRRAAIKTTAALAASALVLTGCARGEEQASGGEGAGNERIAAVGLGDADTLLALGIQPVLVAPWGAEGDVDASGVGPWATDKLGDDKPDTVYGTGSGFTAEVLEKISAADPDKIIAVNNAVDEQAKKALNDIAPTTVKPEGTTDWQIPWRDQVTQIAQAVDKKEEGDKLVEETQKAFDDFQKQHPELKGKRAAIVMPYDGKIGLYTSGDGRGQFIENLGFDIPKELEGDGGEFYRDIAPENYNELNNVDYLFVLDYQGAAETLKKDPTFSKLEVVREGKVRWMEENVGNAMSMPNPLTIPWAVEKFSDAV
>NZ_LT906481.1|WP_012360790.1|1118943_1120044_-|iron-ABC-transporter-permease
MIKAFSPLVSPAQQPPGGAGARRTLSVLAVTLGALVFLVLLMIASLYLGARSLSAGEVTSILLNGPHEATQSGANAERAGIIWDLRVPRTLLAVFAGAALAMAGAIAQSWTRNPLADPGIIGVNAGAGFAVAVSLTVGWATTVGHRAVAGLIGAAIAALVVLLISRVSRDPLTLVLVGVGVTFTLQAATNMLSLYSSDTLEGLRRWTVGSTAGRGMDDVLMAAVGLALGALCAALAARPLDLLAMGEDAARSLGGSPARARLLAAAAVVILAGSATATVGLVTFVGFAVPHLLRPVTGPGLTRLLVPTAVVGGAATLLADVIGRFILQPNELEMSIVLAIGCAPIMVAAVRRRRGISGSKDAEVAV
>NZ_LT906481.1|WP_012360789.1|1117894_1118938_-|iron-ABC-transporter-permease
MTALHAVKRARTRRIFLATLGFAATTVLGYFLILGQGAVKLSPAEVLDVLTGGGTRQAINVVWDLRLPVAIATVVVGAALGLAGSWTQAMARNPLASPDILGVSGGAAVLVVAGTVLARPAWSEGIPTFWWRAGLALIGSLVIVALLMLLGGFGTSQRVVLIGLALSFLTQALVQYLLLKAELTRAADAQTWLAGSTGFVRTEALLPMVLGMLPFVVLGLVVAVDLPLFAHDDATASTLGVNVTRVRSILLIAATGIVAVVVSFVGPIGFIALLAPQLAKLVAGTPTPHPLCSTVAGSALMAVCAVVAGALPFTAPVGLVTAIIGGPALIWLVWSAARGGTVKGMIQ
>NZ_LT906481.1|WP_012360788.1|1117088_1117898_-|ABC-transporter-ATP-binding-protein
MSIRVEHVTAGYSDAQSIVKDVSFEAHPGQVTTLLGPNGCGKSTLLKALSRLLVPSQGRVLVADKDVHSLGAREAARLIALLPQHPICPPGLTVGELVERGRHPYRRALWGGSESPSEDRKKVREALEKTATDHLAARDVAALSGGQRQRVWMAMVLAQDTPVVLLDEPTTYLDPAHAMEILGIVRELAREGKTVVTVLHDLSLAGAFSDTMIVMKEGQKIAQGTPREALTEDVLHEAYGLRAEVWEDPRGTAPIIVPRGVVGNPTQAS
>NZ_LT906481.1|WP_012360787.1|1115782_1116967_+|ABC-transporter-permease
MSYTSSNTIRTVAAREIAVAVRNKGIIFSLIITLILAIGGIGVASYFNNREDSAPALAVVGISAEQFRQVQDSLGDNVEKLSVADATSRDAAEAAVKEDIDAALIKTDEGYELLSDGQPKSSVQATVAAVTGTLTQNEALDKLGINPQEFGEAMGAADVTTTDISEDPVEEQMGAIVTVMLGMMLMTFFIMLFAGNIGGRITEEKSSRVVEIILASVRPLDFLAGKLIGNTIVGLVATAAIVLASVAALSISGLADGFEFDMSVLPMILVSFILGMLFFGSLYAAAGSMVSRTEDLQSTQMPILLFVFGMVYAPAFGFSALDSTIMQVLGWLPPFSLAVAPLQYVAGHMSLPAVLAAYGLCVVVVIAVLALVARIYRNAILHNGKKMSWIGALK
>NZ_LT906481.1|WP_012360786.1|1114847_1115786_+|ABC-transporter-ATP-binding-protein
MTGTALHIEKLNKFYGDHHVLKDMSFSVQPGEIYGFVGSNGAGKSTTMRIALGVLAADSGEVRLGSTPMNDDLRRRIGYMPEERGLYNKEKIADQLSFFGRLHGMDKSAAANAAQDLLERLDLGERAQDKLEELSLGNQQRVQLAASLIHDPDVLILDEPFSGLDPVAVQVMSDMLVERAQRGVPVLFSSHQLDLVQRLCDRVGIITAGQMQAEGGVQELRERGPVIFEIGTPARDWYPDFATFVGEDDGAVLLQVDRQDRDQELLRDALAAGPVHHFQRRIPDLTDLFQEVIQGAKQQAAEESTTREGGAA
>NZ_LT906481.1|WP_012360785.1|1113810_1114701_-|aldo/keto-reductase
MPTITQNLDNNSIIPLLTMNDGRQIPQLGFGTFQLSGETCYNAVRAAITAGYRHIDTAAVYGNEEEVGRAIQDAIDVGEVTREQLFVTTKLWNDSHDRVAGALDASLERLGLDYVDLYLIHWPVEKIGMYATAYRDMVTLRDQGKTASVGVCNSYPEVLDKMIEASGDIPAVNQIEVHPGFNQDELRAENTKRGILTESWSPLKQGQNLNTPAFQAIADAHGVSVAQVIIRWHIQRGDVVIPRSSKPERIRSNADVFGFQLTEEQMQRITVIEEGEAGRRGPNPHTFYQGTSLQKQ
>NZ_LT906481.1|WP_012360784.1|1112952_1113750_-|enoyl-CoA-hydratase
MNKNDSGAGQATVRVGFSEEQGPYGERQVGVITLDRPEKRNALRTAECLAIADGVRELVDAGARAILLTGTGPVLCAGADLGGGVYEDGFERAVEAMLHAVLAAPVPIIADVFGPAIGAGCQLILACDLRVFQDQGECWVPVARHGFALDEWTHSRAVELMGGAWARNVFLGGAHLSAEQARAAGFAIDPRGATAEQFAAKIAAQAPLSMEHSKATLNSLGDDGVTREKTRVRLQELFSTTWASEDAAEARAARREGRAPKFHGR
>NZ_LT906481.1|WP_012360783.1|1112054_1112939_+|class-I-SAM-dependent-methyltransferase
MNPEAQNPAPPAQTAPDPHAFPAPLDVPEFLIPHLSASTHLLDAGCGQGDLTTNLAEHIAHLGGTPAQVTGIDQSAEAIAAATELASSKQLDVAFQQADIHQLPFADDTFDVVFCHQVLHHVPDPQLVLQEFRRVTTPGGIIAVRDADFGAMTWFPPNPGLSRWRATFSVGLATHDGNPAMGRQLPHTFYSAGLSDLSVSGSLTAYASEAERDALAEKWTRRSMSPHSVRTTAAALGEDFPDTAVTDDGELVTDQLGTITREALVQITDGWSQWAATGGAAFFIPNTEVIARVP
>NZ_LT906481.1|WP_012360782.1|1110859_1111978_-|LLM-class-flavin-dependent-oxidoreductase
MQFGIFTIGDVTPNPVTGDVPSEHERIKNTVEIAKKAEAEGLDVFATGQHHNPPFIAPANPPILLAHLAAQTETLQLSTATTLITTTDPVRIAEDYAYVQHLAEGRVDLMLGRGNTGPVYPWFGKDIRKSIPLSVENYHLLRRLWREEDLTWKGEFRTPLQQFTSTPRPLDDVPPFVWHGSIRSPEIAEQAAYYGDGFFHNHIFWNIEHTQQLVRLYRQRFEHYGHGAADQAIVGLGGQIFAADTEKEAKATFRPYFDNAPVYGHGPSLEEFERITPLTVGTPEQIIERYLGYADAVGDYQRQLFLIDHAGLPQEMVLEQIEILGREIVPVLREEFERRRPAHVPSDPPTHATLVAEGPDSPHRQVQPAQVQ
>NZ_LT906481.1|WP_012360793.1|1121955_1123239_-|citrate-synthase
MATDNQDKAVLHYPGGEYEMDIVRATEGNDGVALGKMLAETGLTTLDPGYVNTGSTKSEITYIDGANGILRYRGYDIADLANNATFNEVSYLLINGELPNEDELKEFSERIRRHTLLDEDFKAAFRVFPRDAHPMSVLASSVNILSTYYQDDLDPRDPEKQQLNTYRLMAKVPMLAAYAYRASQGKPYMYPDNSLNARENFLRSMFGYPTEPYEVDPVVVDALDKLLILHADHEQNCSTSTVRMVGSSDANMFASVAGGINALSGPLHGGANQAVLEMLEDIHANGDNADEFMTKVKNKEDGVKLMGFGHRVYKNYDPRAAIVKESAHQILDHLGGDHLLDLAMKLEDIALNDDYFIERKLYPNVDFYTGLIYRAMGFPTDFFTVLFAIGRLPGWIAHYLEQVNDPTARINRPRQIYAGQSERKLNR
>NZ_LT906481.1|WP_012360794.1|1123620_1124760_+|phosphoserine-transaminase
MATPNNELPTLPQELIPGDGRFGCGPSKVRPAQLQAISDSAAIMGTSHRQAGVKDVVGSVREGLSELFSLPEGHEIVLSLGGATAFWDAASFGLIRNKSAHLTYGEFSGKFATVSKKAPWLDAPEIVEAEPGTAPSPSQLDNADADVVAWAHNETSTGAMVDVTRPAGDALVLIDATSGAGGLPVDIAQTDAYYFSPQKCFASDGGLWLAAFSPAAIERVEEIAATDRYIPAFLDLKTAVDNSRKNQTYNTPAVGTLVMLDNQVQWMNENGGLDGMVKRTTESSSHLYSWAEGRDGANPFVTPASARSLVVGTIDFDESIDAAQIAKILRANGILDTEPYRKLGRNQLRIGMFPAIDPEDVKKLTAAIDWILDNGHAAK
>NZ_LT906481.1|WP_012360795.1|1124949_1126152_+|DUF3071-domain-containing-protein
MRELKLVTTDSDAQSLVFVPAEAPAGAEPAEEFFLAVTDELRELLGAAEGSKSGSEHGSEQAADAAGVPAADTEDPGAEAKDASEDDAGSGTSGDGLAAAFSELRENESRARAERERARQTEQESADEERVRKGFGTKSGSGRPHRTRIALSPRIIQDRVRHGASIAELAEEADTDESRIEPYAWPILQERSRIAELARSARPATSEGTSEHTLWEALATAFAAREENVADTQWDAHQDQSRQWVVTVSWAKAAAGQTNTHSAEFLFEPSATGGHNLVHPLDSVARDLVDPRFSQPVRSVTPLHPVDNAESGGGHPAAGAHDLFANTQGGTTPERREDQRAPEQGNAPASGEAAESGAEQGEDFLLHPTEEQGKKRRRKAVTPHWEDVLLGVRTNPKKKR
>NZ_LT906481.1|WP_012360796.1|1126177_1127149_+|hypothetical-protein
MAEETANPNQGVVITQPHTLVTLWFVNAADPRSVLDAEPAPDRGFARKYLAQVNPAWPLTHIGDFDMTRSTSPDVHEFYIGAFPEVSVVQTIMPGLLRLSEIPESYRNLVAAADVYATAYVPEDAGESEDSQTYAGLGGFAHWSGGTLKRAFSATRENILEDVGLPMPFEMPFWEGNAEATGIQLPFIPHEIAAAAAEEWLGFRTDGSGPSIHISAFATDGRPETKSRATDPARLSGARSQSAEDSGLSGTDDGASYDDYTPGGTSNTEVKPAAELAKDVAAATGRLAVRGAKQAWGGRYGIKNMGRKLRDEAQRLARNSGRN
>NZ_LT906481.1|WP_041628618.1|1127188_1128043_-|RNA-methyltransferase
MAPIAITDPADPRLDDFRDLNSSDSRPDLPGGKGLVIVEGSLVVPRLLSSGYPVRSVVGFEGKLSVLQDVTCSAAQPAGGPVVYQVSREVLREVAGFDMHRGLVAAADRIPERTVPEVLADIPAGPSVIAILEGVGDHENIGALFRNAAGLGVDAVLFGAATADPLYRRAVRVSMGHVLRVPWARFSGKTTNWQHGLDAVREAGFQIIAMTPDTELSLADAVLAVRREQGEGARIAIMVGAEGPGLTEHAMRAADMRAKIPMMPGTDSLNVATAAAIGFYASRY
>NZ_LT906481.1|WP_012360798.1|1128048_1129533_-|NCS2-family-permease
MSTSAASPDSAPSQQPARSGLDRFFHITERGSTIPDEIRGGVVTFFAMAYIIILNPLILGTGADVNGDVLGTSRVAAVTAFAAGVMTIAFGVIAKYPFGIAAGLGINTLVAVTFVATEGLTWPEAMGLVVIDGIIIVLLAVTGFREAVFNSIPASLKAAIGVGIGLFIAMIGLVDSGFVRRVPDAAGTTVPVGLGINGSIATWPTLVFVLGLLICGGLVVRKVRGGLFIGIVINTIIAVVIEALAPSGASFENGEPNPKGWSLSVPTLPDSVGGLPDLSLLGAVDLLGAFSRVGVLAASLLVFTLVLANFFDAMGTMTALGKQANLMDDEDRLPNLKTALVVEGAGAVVGGAASASSNTVFVDSASGIADGARTGLANVVTGLLFLAAMFLTPLYEIVPIEAAAPVLVIVGAMMMSQVKDINFSDFSIALPAFLTIVVMPFTYSIANGIGVGFVTYVVMSVLAGRAKKVHPLLYVVAALFVVYFAVDPILGAIN
>NZ_LT906481.1|WP_012360800.1|1129740_1130559_-|DUF3027-domain-containing-protein
MVMASIVPQALGCAPLGGVQGIMGEMTKHKKQRDQLLFSAEAREIAREVITEAAEGEVGEHLGVKVPPRQGQDSGHVAIHRFASLTPGYKDWEWIAVLAAVPGSQEITVNEVALQAGAKAELAPEWVPYEDRVRPGDLGPGDTLPPREDDERLASWDELAKDRRAELENFPRNQKAPQALSAKGLADTLQRWRKGNFGPNSEFAEKAAMSCKTCAFYLPINNPDTQFGMCTNEYSADGRVVHATYGCGAHSETKEEFDSTGGREYGAFDDGI
>NZ_LT906481.1|WP_012360799.1|1130542_1131415_+|glutaminyl-peptide-cyclotransferase
MEAMTIAAFARSARRPVRLMIGAVLAAGLLTGCGSADDEATQAAGPATAAEDARQPEQLKATVIAEHPWDATSFTQGVEVVDEGKLLVGTGRNGESRIYHSTIDGEQSDSHDLDRRYFGEGVTRHVDKDGHATVWQLTWKENTAFRRDADTLKELDQVRYEGEGWGICSTGEQLVMSDGSGTLTFRDPESFAATGSVDVTRGGEPTTMLNELDCRGDEVWANVWQSDEIYRIDPATGEVTGVVDMTGLVPTARQAGVDVLNGIAHVPGTDRFYLTGKLWDTMYEVTFEPA
>NZ_LT906481.1|WP_012360801.1|1131531_1132182_+|DUF2771-domain-containing-protein
MNSSNSQPRPEDTEQFLKRANASKPTPAEGAPQRSRPSAKQRRKAEQRKQLITMLSILALVVVIVGAVLAVNWWQNNREGTLPENQRVVAVVGDEEVEIPPYSACEIDDPDCEPGKPFELDFKGQEEITLRIPEDVYDHDWAMLSIFDDPGANDEQYHKANETTETTVRLKSEKKKSDGSNPELTVVEIHSLLVGRDADGEETPVATVWAISPAGK
>NZ_LT906481.1|WP_012360802.1|1132249_1132633_-|cold-shock-protein
MPVGKVRWFDADKGFGFVSNPGEEDVYVGRQVLPEGVTELVPGQRVEYEFVAARRGPQALSLTILDAGPRRAQHRFKPEQLAGMVQDTINLLDSEVVPVLQAGHRPDRRDSRQIVEILRTIARELDS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT906481_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_5

1570959-1571051

Orphan

Consensus_repeat	Method
TGATGGTTGTCACATCAGTCGCGACATCGTTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT906481_5

>merge|NZ_LT906481|5|1570959-1571051|CRISPRCasFinder
TGATGGTTGTCACATCAGTCGCGACATCGTTGACGCCCACCGATAGCACCGTTGCGGGATGATGGTTGTCACATCAGTCGCGACATCGTTGAC

>NZ_LT906481|5|5|1570959-1571051|CRISPRCasFinder
TGATGGTTGTCACATCAGTCGCGACATCGTTGAC	GCCCACCGATAGCACCGTTGCGGGA
TGATGGTTGTCACATCAGTCGCGACATCGTTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012361167.1\|1575038_1575887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361156.1\|1561177_1562065_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181008
NZ_LT906481.1\|WP_012361159.1\|1564505_1566911_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_LT906481.1\|WP_012361163.1\|1569779_1570757_+\|diaminopimelate-dehydrogenase	unknown	unknown	gnl\|CDD\|273877
NZ_LT906481.1\|WP_012361171.1\|1581805_1582873_+\|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176180
NZ_LT906481.1\|WP_050816673.1\|1573047_1574586_-\|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl\|CDD\|273267
NZ_LT906481.1\|WP_050816653.1\|1562061_1563120_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|235573
NZ_LT906481.1\|WP_012361161.1\|1567763_1568333_-\|tRNA-adenosine-deaminase-associated-protein	unknown	unknown	gnl\|CDD\|274869
NZ_LT906481.1\|WP_012361170.1\|1579214_1581446_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_LT906481.1\|WP_012361160.1\|1567252_1567849_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_LT906481.1\|WP_012361174.1\|1585635_1586430_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
NZ_LT906481.1\|WP_081477624.1\|1563112_1564468_-\|tRNA-guanosine(34)-transglycosylase-Tgt	unknown	unknown	gnl\|CDD\|234642
NZ_LT906481.1\|WP_012361173.1\|1584725_1585592_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_LT906481.1\|WP_012361162.1\|1568425_1569475_+\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|235824
NZ_LT906481.1\|WP_012361169.1\|1576476_1579215_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_LT906481.1\|WP_012361154.1\|1559419_1560769_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_LT906481.1\|WP_012361155.1\|1560859_1561045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361165.1\|1571818_1572937_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|179559
NZ_LT906481.1\|WP_012361172.1\|1583023_1584340_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|273906
NZ_LT906481.1\|WP_012361168.1\|1575965_1576364_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226720

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012361156.1\|1561177_1562065_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181008	PRK07509, PRK07509, crotonase/enoyl-CoA hydratase family protein.	3.66345e-110
NZ_LT906481.1\|WP_012361159.1\|1564505_1566911_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	7.38131e-120
NZ_LT906481.1\|WP_012361163.1\|1569779_1570757_+\|diaminopimelate-dehydrogenase	gnl\|CDD\|273877	TIGR01921, Meso-diaminopimelate_D-dehydrogenase, diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.	2.80379e-165
NZ_LT906481.1\|WP_012361173.1\|1584725_1585592_+\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.95794e-62
NZ_LT906481.1\|WP_050816673.1\|1573047_1574586_-\|DASS-family-sodium-coupled-anion-symporter	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	1.62475e-84
NZ_LT906481.1\|WP_050816653.1\|1562061_1563120_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	2.03403e-114
NZ_LT906481.1\|WP_012361161.1\|1567763_1568333_-\|tRNA-adenosine-deaminase-associated-protein	gnl\|CDD\|274869	TIGR03941, conserved_hypothetical_protein, putative tRNA adenosine deaminase-associated protein. This model describes a protein family about 200 amino acids in length with only five invariant residues, including an Arg, a Ser-Asp pair, and two Gly residues. Members always are found exclusively in Actinobacteria, and always adjacent to homologs of TadA, a tRNA-specific adenosine deaminase from Escherichia coli. Homology, phyletic pattern, and gene neighborhood together suggest a housekeeping function in tRNA metabolism. [Unknown function, General].	6.94961e-49
NZ_LT906481.1\|WP_012361170.1\|1579214_1581446_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	4.27056e-83
NZ_LT906481.1\|WP_012361160.1\|1567252_1567849_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	7.47665e-55
NZ_LT906481.1\|WP_012361174.1\|1585635_1586430_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.85014e-118
NZ_LT906481.1\|WP_081477624.1\|1563112_1564468_-\|tRNA-guanosine(34)-transglycosylase-Tgt	gnl\|CDD\|234642	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional.	1.69625e-169
NZ_LT906481.1\|WP_012361162.1\|1568425_1569475_+\|prephenate-dehydrogenase	gnl\|CDD\|235824	PRK06545, PRK06545, prephenate dehydrogenase; Validated.	6.40147e-115
NZ_LT906481.1\|WP_012361169.1\|1576476_1579215_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	1.96506e-89
NZ_LT906481.1\|WP_012361154.1\|1559419_1560769_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	3.70036e-124
NZ_LT906481.1\|WP_012361171.1\|1581805_1582873_+\|NAD(P)H-quinone-oxidoreductase	gnl\|CDD\|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	4.99692e-159
NZ_LT906481.1\|WP_012361165.1\|1571818_1572937_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|179559	PRK03321, PRK03321, putative aminotransferase; Provisional.	0
NZ_LT906481.1\|WP_012361172.1\|1583023_1584340_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|273906	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity].	1.1638e-67
NZ_LT906481.1\|WP_012361168.1\|1575965_1576364_+\|membrane-protein	gnl\|CDD\|226720	COG4270, COG4270, Predicted membrane protein [Function unknown].	8.4552e-05

>NZ_LT906481.1|WP_012361163.1|1569779_1570757_+|diaminopimelate-dehydrogenase
MATIKAGIVGYGNLGKSVEAVIKQTSDIELVGVFSRRDSLDTDAPVIPVADVAEYADKIDVLYLCLGSATDIPEQAPEFAKYACTVDTYDNHRDVARHYSAMQDVAEKAGNVAVVSTGWDPGMFSLNRVYAAAVLPGAQQNTFWGPGLSQGHSDALRRIEGVASAVQYTLPAEEALDKARRGEAEGITGKNAHKRQCFVVPESDDAALKERIENDIRTMPDYFVGYEVEVNFISQEEFDKNHTGMPHGGHVITTGELGATRTHHTVEYTLELDRNPDFTAAVQVAYGRAAHRLKESGQTGAFTVLEIAPYLLSEKSLEDMLREDV
>NZ_LT906481.1|WP_012361162.1|1568425_1569475_+|prephenate-dehydrogenase
MNTQHESQPTRHPLHPSPGTPTAFERFPVCVLGLGLIGGSLLRDLADDGWPAFGWNRSAKTVDQATEDGYDVSGDLTATLQRAEREDALVVLGVPAPALPEILDAVGQHAPSVGLTDVTSVKGEVQALVEDRGMADRFVGGHPMAGTAHSGWRATLNGLFDGAVWVVAYDRAVAENEPPRAWFTTFERVVRMAEATGAITIPSRSGAHDRAVARISHLPHVFAETLAMVGDQGGPLSLALAAGSFRDTTRVAGTAPSLVRAMCEGNRDALIECFDEALEILNQAREELEHKDLSALTEAGYAARKRYEATTKHGDATDPRPVIRVSPGAKGWVDQLLSAESIGARIEIF
>NZ_LT906481.1|WP_012361161.1|1567763_1568333_-|tRNA-adenosine-deaminase-associated-protein
MQTHARRPAKIRNMSNTDSFDTIAVVATSTEHGWALRELPDDATDSLESLVDHLRSERAEGAVLGLVCIEDSWCAIVRPVPGGVGILMSDATAAIDDYLATDMLDELDVDTPTEEEADEADENDTPWPEGEFDMLEDLGVSEQLLTVVFDDPEYYPAEQLICVAEELGFDEELSDLLDANLPDDEDDDD
>NZ_LT906481.1|WP_012361160.1|1567252_1567849_-|nucleoside-deaminase
MWLRSWASTRSSPTCWTPTCLTTRTMTTEPGSPAQPDRLIGGGLPRQGGHVADEELMRQAIDVACSTPPGDVPVGALVVDADGTVLATATNRREQDADPLAHAEVLALRQAVRALGDSWRLERCTLVVTLEPCAMCAGAALGARVGRIVFGAYEPRTGACGSVWDLPREALLHKAEVRGGVLQPECEQLLRGFFEKLR
>NZ_LT906481.1|WP_012361159.1|1564505_1566911_-|MMPL-family-transporter
MAKFLFHLGRWSFTRKWLAIGIWLVVLVGIGAAALTSQKGFNDVFEIEDMPSTHATELLQEKFPEMGDPGEESIVNVVFQAPEGKQLKDPEYMAAMDRTVEAIKKDVSHLGDTLQLHNPVTMNDGLQKELVKQEMDMGLPRETALLDAHTLRAVSDDGRTGVLSFTFDVPVPADVTDEDRAAVTEAMNISRDAGLTVEAGGLGFADPVAVEPISEIAGLVVAMIILWVTFASLLAAGLPLLTAVVGIGIGTLLTVGATFFVPLNSMTPTLGLMLGLAVGIDYALFIMARYRDELRHGRSRLDAIGLATGTAGSAVVFAGLTVIIALVSLRLANITFLTYMGYAAAANVFIAVLVALTLLPALLGVLGDRVFKKEAAGPHDTEARAVPPEKQKNTISVRWVKLVHRVPGLMLALVMVVLAGLSIPVLNLELALPSDKTANVTSTQRKSAEMLEEGFGGGKNAPMLVVVDGSEARADAEALKPYRGGTEPTSENQPSPAQATFMYAADQMRQNSDVVNAQIVGMSEDETAAQLLVTPKEGPTDDRTVQLIHTLRAQQAAIEAATGATIGITGLTAIQQDVTDKLADAMPIYLGLVVGLALILLLMVFRSIVVTLIAALGFLLSVGAAFGVTVLFWQEGLWGLWHSPGPLISFVPIFLIGVTFGLAMDYQVFIVSRMRERFLHDSQVAARGSRYTAVEDSVIGGFSLGAQVVTAAALIMIGVFASFVFQPLPFIQIFGFALGAGVLFDAFFIRMTFVPALMFLFGKGTWWMPKWLDKVLPTVDVEGSALENAFASGEIGEAAKR
>NZ_LT906481.1|WP_081477624.1|1563112_1564468_-|tRNA-guanosine(34)-transglycosylase-Tgt
MTSGSHSQPPHDAAGFATDTSFELLKPLGEVTDPIASHSGEGDRETRLTQGRVGVLKTPHGNINTPAFIPVATKATVKTLTPEQVRSAGAQAILSNAYHLYLQPGPDIVDEAGGVATFENWHGPTYTDSGGFQVMSLGVGYKKVLAMDSKVSEDKVIAQQKKRMAIVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELTTLANTRAYQEASVARTHRWAKRCLEEHQRQTELRSHRPLQSLWGVVQGAQYEDLRRQAARGLVQLSEEAEAEGKRGFGGFGIGGALEKENLGTIVEWVSQELPDDKPRHLLGISEPDDLFTAIAAGADTFDCVAPTRLGRRGGVYTLDGRMNLSNARFRRDFTPVDAEVGGYVSENYTRAYIHHLLRAKEYLAGTLCTLHNLHFMIKLVDNIREAMLEGRFEEYRAEFMGRYYGPGWEQRLG
>NZ_LT906481.1|WP_050816653.1|1562061_1563120_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MANGGAGLAQQGAGRYAPSPSGDLHLGNLRTAILAWLFARHSGRAFHLRVDDIDAQRSSEESARRQLADLAALGITHDGPIVYERDCLDHYADALQKLADQGRVYECYCSRKEIQEASRAPHTAPGAYPGTCRNLSEEERSTRRAELAEAGRSPALRLRVGDLSTSAATPASLVTTHTITEGFAAGEALGSDVLKEGTYTGEVDDMVLRRGGNTAQLDGSEYAYNLAVVVDDALAGVDQVVRGDDLLSSAPRQAYLAGLLGLPEVEYLHVPLVLGPEGKRLAKRDGAVTMRELGVADALAWIGESLGEAVGVTAARVRDALAQGAVPAEILEGWAESFRPELLSREPVTYLG
>NZ_LT906481.1|WP_012361156.1|1561177_1562065_+|crotonase/enoyl-CoA-hydratase-family-protein
MTARTEHSSATTAQEASARNEGPASRHGEVTLNVEDGIAYVTLRRPGKLNSLTLSVLDDLVATAHRIRRDRTIRAVILAGEDHNFTAGLDFGSALKTPAGIAKAFVPRPWRGTNTFQEACWAFRRLPVPVIAAVEGFCFGGGVQLVAAADYRFTTADAQWSVLEAKWGLIPDMSGIFSLKQLLPIDTAKRLTMTGEVFDGTRAVELGLASEVAEDPAGAARALAEELATRSPDSVAYAKRIIDETWTAGPRRTFFMERARQARLLVAKNTKIAQKAAAKARGAVVDARFKPREVR
>NZ_LT906481.1|WP_012361155.1|1560859_1561045_-|hypothetical-protein
MSSVINLVLGVLLVYVIVGPLPLGLQLLATWLVQRREQKNGQDVVASGDWWKLLGTARAGG
>NZ_LT906481.1|WP_012361154.1|1559419_1560769_-|IS256-family-transposase
MTTVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQAEMDAHLGYSHSDRKSKAQVEPVHGGNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMVPKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMSPDTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGVDMDGIKHILGLWIADNEGAAFWASVCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRASNRWVSHQDRKSVSRALREVYTAANEDTARASLDAFQASELGQRYPQSVKVWRDAWDRFVPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNIEDKRAAQRAKKAKRDIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL
>NZ_LT906481.1|WP_012361165.1|1571818_1572937_+|pyridoxal-phosphate-dependent-aminotransferase
MPGMVRSDLSKLPAYVPGKALPDALRLASNETAAAPLPAVQEAVANAAAGLNRYPDMGVAALRGELATWLSRTPGAPELTAENIAVGNGSSALCLQSIQATCQDGDEVVFPWRSFEAYPILTQIAGARPVAVPLSSDFCIDLDAMLAAITERTRLIFVCNPNNPTGTVVPQAQLAEFVAQVPEHVQVVLDEAYIEYDRSGLAGDAGTKGAGVPASVNGLALMAQFPNVAVCRTFSKAYGLAGVRLGYLAGSEEFVEALLKVAIPFGVNALAQVAGLESIGEEAQQQLQQRVAETVAQRERVTESLPEELQVPSQANFVWLPVGEKAEALEAAMKEEGILTRCFAGEGVRITVTDETETEELIPALRRALAQL
>NZ_LT906481.1|WP_050816673.1|1573047_1574586_-|DASS-family-sodium-coupled-anion-symporter
MTERAEQEQKARRRAVVGLFVGVLLAILVYAIFPADAADVVNRAHPDAEKGPFDADALRITAAIAVLMGAWWMTEALPLAATALVPLVAFPILGVVPFKEVSPSYANPTIFLFMGGFILALGMQRWNLHRRLALRVVTLVGTKPKQMVLGFMIATGFMSMWVSNTATAVVMLPIGMSVLGLTADMVGGFSKQKKFSTALMLGIAYSASIGSLGTIIGTPPNTLMVAYLQESHDIHIGFGQWMLVGVPMAAVFMVLAWLVLITVFKPEMDQIPGGRELIQEELEKMGAMSRAEKTAGSIFLLAALAWVFVPVISDWAGWEHNIDDATIAITAAILMYMLPADGSGSRVMDWEHTKEVPWGVLLLFGGGLALSSMFDKSGLSLWIGEVARGLGGMPIVLLTAATAIVILVLTEFTSNTATAAAFLPIMGGVAVGTGLTAGNDMNVLLLTIPVALAATSAFMLPVATPPNAIAYGSGYVRIGDMVRGGLWLNLVGIVLITIVTFALAVPVFGLTL
>NZ_LT906481.1|WP_012361167.1|1575038_1575887_+|hypothetical-protein
MARNSSDEELLAALHAELAVHPWAFEPVRSGAGDNGAGTKGAGDNAEGTDGAASTGNPAAPLRGGATPGTQQLARVELAANAGAPERVVTIGGGWVVVRPARFPTPHARPATASRGGRSGASRRGGRRKQRSSADASASLMQPVMWEYEAVLRCRPGEPLRLRSAQGSEHRLGLVRRITVLDQPAQPEGVRSLGGLQHSQLSNREYMLSFDSGATMLVDRQLWLTHIARREVAHEFLRWRVLSRAEVGSPLAYRAPRGEGQGRADAAMELTELGAITRILPI
>NZ_LT906481.1|WP_012361168.1|1575965_1576364_+|membrane-protein
MTTPTTSQKFTRLALGTIMSIAGASHLTFARKDFQAQVPNWFPMDKDFVVLASGVAELGFGAALLGLPKQHKRTGIALAAFYTAIFPGNIAQYAERNDAFGLDTDGRRLARLFGQPVLIAAALWSAGIPHRR
>NZ_LT906481.1|WP_012361169.1|1576476_1579215_+|YhgE/Pip-domain-containing-protein
MLNCPRKWYGHVVNTAWKIFIRDLKRLVSVRKVWVILIGVMITPALYSWVNVAAFWDPYGNTENIKVAVVNEDRGASSPLTGSLNIGNEVVAELKENDELGWQFMSKSEADHALARGDVFSSIEIPDRFSRDLLSTFQGTYSQPQLIYRPNEKLSAVAPLITDAGASAINDQITSSFKKQLGETASKKVREEGNSISGRLDNSKNKAVTGLDDTLVTLDEGQESLDKMKGRVAGARPTIAATKDALNSAHGTLEDAKSTLAEVDKSVAIVQRMVADFSDSAGDAYAQSTAALAEGTAAANSSVAGVSSAAEQAGRQIAGASEQTTQLVDLGDRNIAQLRGLMGAAGVSPTIAGQLNATIDDLQRSNDANRQLLADLNAAGKSTSETAKVLRESSEELTQAAAAARDSAKGLNSTTGDTLPKLNRAINRLSAATGSFSGSLSSQQSLLREASNVLDGVDRQIGATTDVIDDFKCNLSSLQDGVENAKTDVLALSLGDDEAFRAVRGLNSEDIGQFMATPATLVNEPMYPVKSYGSGMAALFTNLTLWIGAFVLVVIFRVEVDTEDLGKRARRVSVSQAFWGRFLLLAAFVVGQALIVSIGNLLIGVQTVSPTLYTLTNVLVGFGYLGVIYGLVSALGHIGRGLAVGMAFIQIPGASGLYPIEMTPDFFKIVHPLLPMTYGIDAARETIGGFYGTHYWQALGVLGLMSLAFLFVGMVARRRLSHVNLILNQQLARSGLLVSDKVQVVGSGYRMADVIHALNNHEQFNEFTEERTAKVLRDTPKQIRRTAIIGLIGLAVLGVVNAVFDTERATIFAIGIAWALLIIFIIGAREYTGQSYLHAQELGDLDSDELQYVAATQAAGSKEYTFDDEHEEHLARAHAEKAGGGDAAADGGEAAGGNNGGNSDVEKQEGEN
>NZ_LT906481.1|WP_012361170.1|1579214_1581446_+|YhgE/Pip-domain-containing-protein
MSKIREILHHDLRSARKNVITMIVLFGLTVVPLVFTVFNVLASWNPFDNTDELKIAVSSEDEGHDTDLAQVNLNLGEQVLAQLSLNKQIDWIITTKEDALDGTRSGEYYASIVLPPSFSKDLMTFYIAGTEPTELTMYTNQKKNSLAPMITEQAATGAIDQINESFSEVVNNVGLGLVKDLNKVLTEGDTKAVLDRMEASVDGVSRQLRQGSNSVSSLSSLVESTIPLAQSAERITDSAGAQMDALDLSGTGGSGGSGGASGASDEALANLGRTFADAASSLSESLQATSDSYNAVGNSIDRVFGRANSSPETSANALDRMADRFDAQLGGLNDLRNTLETRVAPALPITAKPAYHGVLNNIDESIARATELRDTFRRSAKDLRSGKTSMEQARKDSKSAIAKAVEAVDKARNSYANDLQPQLAKLGESVQQLSQSVQGVKADVARAKGTLGDASLADSLGSMQAATAELSKKLNQRADDADKLAREIKRAGETGDLSRLARMIGNDPSLLAQHMANPTAVKREPLNEVNSFGTGMTPLYGALALWVGALITSVVVHTRISERGEETEEALDPERYSRAQAYLGRFGIFALIGTVQSLLMAAGLIFFVGIEPAHPFLFTLACWLSSMVFMLVVYTLVISFGNAGKALGVLLLVFQVSGAGGAYPLELLPGWFQSMSPFLPATYAIRAFRASIAGIYQGDYWLDILGLLVFVLPVLLLGLVLRKGLDGYNRRMDEGIAESKVLA
>NZ_LT906481.1|WP_012361171.1|1581805_1582873_+|NAD(P)H-quinone-oxidoreductase
MHQRNPDPVSAAVARLGAMNSTSTNTAHAIIQTDPKDPSSLEWQAIDKPQPAEGEALVRIHYAGLNRADTLQAQGHYPPPKGVTETIGLEAAGVVENPNGATKPDGTPWQEGEEVAVLLSGGGYATHAAVPAGQLMPIPKGYSLAEAASVVEVACTVWSNVADIAGLREGELALFHGGGGGIGLFATQYAHAIGAKVAVTAGSQAKLDVCRSYGADTLINYKEEDFAEVLRELGGADVILDIIGAKYLDSNVKALAMDGRMVIIGMQGGVKGELNIARLLSKRGTISATGLRYRDTEDKARIVRGTLEEMWPLLESGKISHHIDRTVPIQDAAAAHQALLAGEVTGKVVFEVPQS
>NZ_LT906481.1|WP_012361172.1|1583023_1584340_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MNAATDPQLPERVSGAVSRAFRSAPLAAPIEETHGEHSRAASPGTRIGESHIKSARVAIADLVGARPEHVILGSSRKQLINQLAESMSHRLRLGRQVVLSRVDDGANIDPWLRAADLYGADVRWAEADLSTGVLPAWQYTELVSPETAVVAVAAANEHVGTVTDVAAIGRTVHAKSDGIFVVDANAIAPFHLIDIADLGADVLAFDVATIGGPSIGALVFRSVELMGELFPHPPRQSRARSAARFGAHKDVNPGSGGLALRGAVHPSVERAREWLELGGLSEGLLGGVSAAVDHLADLASDAEGDSLRGTRRRRLRGALPLAEDYVHALARMVVDGLHGLPGAHVIGLEGEYEEHFDYDSVERIPRLSFFIDGVPAEAVHDRLFAQGVVTSVIPPGDSELLAQMGVFESSTGAVCVGLSVHNTVGDVNRLLRAVASLR
>NZ_LT906481.1|WP_012361173.1|1584725_1585592_+|ABC-transporter-permease
MTDLSRITATHDGDIPASRSQTFAAAWDDLTRGFQQRELWLALGWQDIKQRYRRSVLGPLWITIATGVMAAALGLLYSQLFGIDVAVFLPHVAVGLIMWGFIAGCIKEGAEVFISNEGLIKQLPSALSVHVYRLVWRQFLFLLHNLVIWLALLAIFRIPVGWEVLLAVPGLALLIINGVWVTMFFGIVATRFRDVAPLLDSLVQLAFYMTPIVWTAQTLTDQGGAVAERAALAKLNPLYHYLEIVRGPMINVPVEASSWYIVIAMTVVGLGLALLAMRKWRFRVSYWV
>NZ_LT906481.1|WP_012361174.1|1585635_1586430_+|ABC-transporter-ATP-binding-protein
MKQQVSIDTYNACVDFPIFDAKTRSLKHTFLGAAGGAIGRNESNTVMVEALKDINLHLQDGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGSAVVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLGQTRKAMNRKMDEIAEFTELGDYLAMPLRTYSTGMRIRLALGVVTSIDPEILLLDEGIGAVDAAFMAKARSRLVEMVKRSGILVFASHSNEFLAQLCDSALWIDHGEIRQAGPVDEVVEAYEGPEAGQHVRNVLRDLGR

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Crispr_ID: NZ_LT906481_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_6

1598278-1598423

TypeI-E

I-E

Consensus_repeat	Method
GGCTCATCCCCGCTGGCGCGGGGA	CRISPRCasFinder

2 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_LT906481_6

>merge|NZ_LT906481|6|1598278-1598423|CRISPRCasFinder
AGGTTGTCCCCGCTAGCGCGGGGAGCACAGATTCGGAGGGAGGTCGACAAGCCAGTGCGCCGGCTCATCCCCGCTGGCGCGGGGAACACCGTAGCGTGTCGTGGGGCGAGGCCGCCGACCTGGGCTCATCCCCGCTAGCGCGGGGA

>NZ_LT906481|6|6|1598278-1598423|CRISPRCasFinder
AGGTTGTCCCCGCTAGCGCGGGGA	GCACAGATTCGGAGGGAGGTCGACAAGCCAGTGCGCC
GGCTCATCCCCGCTGGCGCGGGGA	ACACCGTAGCGTGTCGTGGGGCGAGGCCGCCGACCTG
GGCTCATCCCCGCTAGCGCGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012361194.1\|1608260_1609391_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_LT906481.1\|WP_012361189.1\|1598888_1599128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361183.1\|1593254_1594670_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_LT906481.1\|WP_012361186.1\|1596808_1597690_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_141759414.1\|1597984_1598206_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_169847096.1\|1599306_1600338_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT906481.1\|WP_012361195.1\|1609439_1610135_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_LT906481.1\|WP_012361180.1\|1592176_1592578_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_081477625.1\|1598442_1598892_+\|EndoU-domain-containing-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_041628535.1\|1605555_1605900_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_LT906481.1\|WP_012361182.1\|1592725_1593100_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|224861
NZ_LT906481.1\|WP_012361196.1\|1610118_1611801_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_LT906481.1\|WP_012361191.1\|1605896_1606835_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|187850
NZ_LT906481.1\|WP_012361184.1\|1594701_1595460_+\|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase	unknown	unknown	gnl\|CDD\|181162
NZ_LT906481.1\|WP_012361179.1\|1590683_1591469_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361178.1\|1589785_1590442_-\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_LT906481.1\|WP_012361193.1\|1607538_1608261_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_LT906481.1\|WP_012361185.1\|1595650_1596556_-\|cutinase-family-protein	unknown	unknown	gnl\|CDD\|366455
NZ_LT906481.1\|WP_012361192.1\|1606837_1607542_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_LT906481.1\|WP_012361181.1\|1591488_1592178_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012361183.1\|1593254_1594670_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.51866e-56
NZ_LT906481.1\|WP_169847096.1\|1599306_1600338_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	6.23873e-107
NZ_LT906481.1\|WP_012361195.1\|1609439_1610135_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.84125e-35
NZ_LT906481.1\|WP_012361182.1\|1592725_1593100_+\|phage-holin-family-protein	gnl\|CDD\|224861	COG1950, COG1950, Predicted membrane protein [Function unknown].	1.2332e-15
NZ_LT906481.1\|WP_012361194.1\|1608260_1609391_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.02394e-166
NZ_LT906481.1\|WP_041628535.1\|1605555_1605900_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.14143e-42
NZ_LT906481.1\|WP_012361196.1\|1610118_1611801_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	5.91798e-116
NZ_LT906481.1\|WP_012361191.1\|1605896_1606835_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.39339e-122
NZ_LT906481.1\|WP_012361184.1\|1594701_1595460_+\|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase	gnl\|CDD\|181162	PRK07904, PRK07904, decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase.	1.19704e-160
NZ_LT906481.1\|WP_012361178.1\|1589785_1590442_-\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	2.1087e-21
NZ_LT906481.1\|WP_012361185.1\|1595650_1596556_-\|cutinase-family-protein	gnl\|CDD\|366455	pfam01083, Cutinase, Cutinase.	1.00722e-06
NZ_LT906481.1\|WP_012361192.1\|1606837_1607542_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.47561e-77
NZ_LT906481.1\|WP_012361193.1\|1607538_1608261_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.72304e-45

>NZ_LT906481.1|WP_141759414.1|1597984_1598206_-|hypothetical-protein
MSVLSGKSPGSALAGARELKRKIDWRATMGIIDSLQAWAGEHETFIFILFMLPFAIGLSFLFEGGDGGDYGGD
>NZ_LT906481.1|WP_012361186.1|1596808_1597690_-|hypothetical-protein
MSLKNAAKRLAAAAATILAATGLMLGTGQPIAAAASSGSSGSSLSSGSSGSSGSSLGSSLGSSEARLDGMSFNQSRIIRGGASFWVQRADGSVNPCTVTNVVRRGHTNYAVTAGHCISGHVTQIRHKGQVIADAADVRAGWHIVQGNKRPGGHFINDFGYFRLKPNVKVQYNVVHLDRVHPVHQPASAATRAIHRRAVSAPFGAPLRVHQGMVGRIACKEGNTTGLTCGPIVRVNEKTQDVSGLIPSRPGDSGAPLYLLGRDGKRHLIGQLAGGTHYVYKSYDGYVHNLARIK
>NZ_LT906481.1|WP_012361185.1|1595650_1596556_-|cutinase-family-protein
MGMKKFAAKLAAAALTGVLALGGAATIGGGANNGLLASADAAPVGSGFAFTPTAQGACTSTMVIAIPGGGNTVDGVPDSVPHGFLVGQVANQLSAHGIAQRTVSYRATPFFTLSYDQSMRQGYAKARQLIAQTAAHCPNAKFALVGFSEGSDIASHIIADINAGRGPIPAKRFATAALIANPHNGPESKHKGGTLRDGEGILGAMRGYGKLGDRVLDICNIDDFVCNRYAATPGARAIAKDMLHASAANGYAGLNPMQVVGEAPRIAMGTRQHTKTYQFISPIPHAVGHVLAHRDLPKAED
>NZ_LT906481.1|WP_012361184.1|1594701_1595460_+|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase
MIDAVGKPQSILLLGGASDMGLAVVEEFLSRGPARVVLAAREGESLDDATRRCQAAGASEVETLAFDAVDFDSHPAVIDKAFAAGDIDIAIVAFGILGDNEKQWQDQKLAVQAAQVNFTGAVSVGVLLGQKMKEQGHGQIIAFSTVAGEMVRRSNFVYGSTKAGTDGFYRLLGEALRGTGVRVLTVRPGQVRTNMTKDLDDAPLTVDKTDAAKAIAKAVDDKKTIVWVHPLFRPIMLVLKHLPMWVLRKLPI
>NZ_LT906481.1|WP_012361183.1|1593254_1594670_+|FAD-binding-oxidoreductase
MSIHTTTKTLTGWGRTQATTAEVLSTPDVETIAKAVAQVADDNADKPSHLKRGVIARGMGRSYGDPTNNAGGLVIDMRELNKIHDIDPDTAIVDVDAGVTLDQLMKAALPYGLWVPVLPGTRQVTIGGAIGPDIHGKNHHSAGSFGDHVLSMELLVADGRVLHLEPEGTPDDPKGELFWATVGGMGLTGIILRARIEMTRTETAYFIADGDLTHSLDETIEFHSDGSERNYTYSSAWFDAISGGSKLGRAAISRGSLATLDQLKELSPKLAKDPLKFNAPQLMTVPDIFPNFTMNKLSMIAIGELWWLKSGEYRNQVQNLTQFYQPLDLIGEWNRGYGSKGFLQYQFVVPTEAVEPFKQIIKDIQASGHYSALNVFKLFGEGNRAPLSYPMPGWNVCVDFPIKPGLGKFLDDLDRRVMEFGGRLYLAKESRTSAENFHKMYPGMEGWLKTRHNIDPTGVFASDMSRRLELH
>NZ_LT906481.1|WP_012361182.1|1592725_1593100_+|phage-holin-family-protein
MRCALDVVVTAVALWLVTLVIPGVSVMGGIGAFIWAALVFMFVNAFIAPVVRLLSLPLRILTLGLFSLIVNALLFSLVGWISSGIGNGLVVSGFWAAFFGAIFMAIATWIVEGTLKAIGIGSAL
>NZ_LT906481.1|WP_012361180.1|1592176_1592578_+|hypothetical-protein
MLSILPRQPGAPLARPQRPTGTCLQPRLEFLGMAGLFEKLSTGLSNIVGKQPKEQKEPPLRVGGVGEETTYEAAERTQLPLNSWMTRMMAQELPIMDSVSRQRVRDILRDYDGPEITSIEELPEEIRTIMDLY
>NZ_LT906481.1|WP_012361181.1|1591488_1592178_-|hypothetical-protein
MKKPPLAFEALAAAAGTAAFYGIKDFLPAGRGRGLLRGAALVAGIGPYVLRSTAETMEFAKEEFSHASKQTAELRKLLDDARARQQEGAVPQDSDVADLAAGEDVAVDGDAFNDDVVPNGVVDDGAVRDGAADEDGEDAEEIWPPNDPRWWDRVFSLPPYAVLPGAAVVLVLAVTVGVRIDRAIQRAGVKALESRGVKHPNAAWGVISGVIGALAVVADRKTQERAVRS
>NZ_LT906481.1|WP_012361179.1|1590683_1591469_-|hypothetical-protein
MSGEVAKIEAMSPASEAQSPSVESSSAEVSSAETSSTEVSSAVALTPTPTLAVAPSDRPEDTPGPITYYPPVLVACRVGETTAIWQVETDPELTRGDFSGAWLLGPDGVKGFAGEAEWIEDREDPAAMARLLLVHPVFLTEDSQGDISYGGLAEGELHLVDVAASQKAAEAAVAAAKAEFEEANGGKRSTGWGEVRPIEPVEGHPPQGLDEDAEKVVTSVLALARGVRTWNRDWAAFEAVRKRRLKNEPDQPRWVPIRLQD
>NZ_LT906481.1|WP_012361178.1|1589785_1590442_-|GtrA-family-protein
MPETPNDHTKLQPRTAAKPTPAGRLARSKAIARQFVRFGLVGASGFVVNQVVFVLAKKFFDRGFGIDDLEVLFQLLNTQWNMRWYHLFSVLAFLVANVWNFVLNRYWTFKGHHKQPWWIQLPQFMAVGVFGLLITLAVSTLVVHTNSPIGLPEDIFDNSTGLRTRSYWGNFIGVIVAVPANFLFNKLWTFRNKGPKGAGGSEGHAANAAPKTETKEPK
>NZ_LT906481.1|WP_081477625.1|1598442_1598892_+|EndoU-domain-containing-protein
MTTAPYLGGEPVPDVAKLVKHSVWGWRHGDGEIQPDAPRNGHTFDSVRRKGTFFPRSWSDQEIAEAITTTIESPDFVKARAVRRVVYRDINDVMVTVEWDYVKGTAKGNTAYPTFGNGVARFVPSKNERVEWSQDHEKTMRKARRVIQE
>NZ_LT906481.1|WP_012361189.1|1598888_1599128_+|hypothetical-protein
MRVEEAVRELLDLPELSDSGARFRLECGEVADAASYLIEDVAEAGVDITNEQRKALLEGLMEYARGDNDIYEAYARLLA
>NZ_LT906481.1|WP_169847096.1|1599306_1600338_-|IS30-family-transposase
MEVLPQAAVEKVIDRRYLSLVERERIADRVNRNLSVRAIARELGRDPGTISREISRNSGDDGIYRPFEAHRKSTLRRFRPKVSKIAANPRLKQQVWQWLRMEFSPEQVAGRLRREFPGDETMHVSHETIYQELYCQARGELKKVVAHALRTGRTRRKPRGQRVARSRFVDPMIMIADRPAVVEDRAVPGHWEGDLIIGAGGRSAIGTLVERTTRYVMLLHLPDGHGAVAVRDALVEAIMTLPQHLRGSLTWDQGSEMAGHRSFSIATDCPVYFCDPGSPWQRGTNENTNGLLRQYFPKGADLSVYGREELELVAHRLNCRPRKTLGFATPAERMAELLDLAES
>NZ_LT906481.1|WP_041628535.1|1605555_1605900_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLIVTACPAGLRGDLTKWLMELAPGTFVGRPSARIRELLWDRTVELCKDGRALLVYSSNNEQGMEFRTHRHDWEPTDFDGLKLMMRKSDSEKTRRRTGWSRARQLRRKYEGR
>NZ_LT906481.1|WP_012361191.1|1605896_1606835_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MRTPQQVPIERQSLSQMGDRISFLYVERAVVSRDGNALTITDQRGVAHVPATQLAVLLLGTGTRITNAAMALLGDCGVSTVWVGERGVRYYAHGRPPAKSSRLAELQARVVTNQRKRLECARRMYGLRFPGEDVSKLTMAQLRGREGARMKRLYAAEAKRTGVAWNRRRYDPNDYDSSDPINQALTTGSAALYGIAHAVIVGLGFVPALGVIHTGTDRSFVYDVADLYKAEVSIPAAFNAVASGTEDVGPMVRRLVRDAVVEQRLMPRMVRDLKFVMSVPDDEPLSDIELMLWSELELTSAGINWAGEGVDQ
>NZ_LT906481.1|WP_012361192.1|1606837_1607542_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTFTKIQLNPHRREGRKLLSDPQRMHAAVRAAFPPELDESDARVLWRVDPGEHEHVLYVVGPEKPTGAVLVEQAGWDTLPAQTADYSRFLGKLTRGQRWRFELVANPTYAEPRKGGRGKVKAHVSVRHQIGWLYRKADAAGFGLAPRLDDEVSDEERSRWSEFDAPQVTERWTDVFHRNKAGGGRGRPVRIAKARFTGTLEVTDPELLRQALAQGIGRARGYGCGLLTLAPIG
>NZ_LT906481.1|WP_012361193.1|1607538_1608261_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAHSLLLLLKGPMQSWGDESRFSVRATATTPTKSGIVGLIAAAQGRRRTDGVEDLAKLRMAVRVDQSGSLLRDYQTAQPWLKNPGANASLVTRYFLSDAAFVAAVESEDRELLDQMAEALRRPAYPLYMGRRSCPVHPGLVIGVVDGDAESALRAHDTWHATAVHRKESPKKVSLAIYRDANPGEGGSVPRQDVPVSFSPEHRKYGWREVIRAEDVEIDNPDGDEKSATGDVFFETVMRA
>NZ_LT906481.1|WP_012361194.1|1608260_1609391_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSKIIDIYALQSLPPSLINRDDTGVPKNAIFGGVPRQRVSSQSWKRAIRRYFFENFDAANIGDRSKRLPEKIARQLEEQGMEQGTAIERTEQLFKAAGIKTAVEKKPKDKDETDAEVAYPQTGYLLFLSAHQIDNAVKAIQERDGKNFTKREAQAILDQEHSVDIAMFGRMVADDAAYNVDAAVQVAHALGIHDSAPEFDYFTAVDDLAEEGEETGAGMIGTVQMMSSTLYRYATVNLEGLAENLDSEDAAKQAAVEFVEAFIASMPTGKINTFANQTLPELVYVAVRDTRPVSLVNAFEAPVEATEDKGRREVGAEVLAQEARDVENVYGFKPQASFVMGLGQLAEPFTDIATQVTLPELKEQLAGAIDQLMGDE
>NZ_LT906481.1|WP_012361195.1|1609439_1610135_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MASDLKATAPSPGVAADVAGTGTAEAATPAEQRPNLKFAVGRTAEILQRDYLAGGNTAAANARGTLAELRKAGALKLENHPLALESVLMALLVPLSEREQGKSDHASPSERAAFYALTLFGQHMQSSQQQVHNSEQSFAAACGRLHATVESKSIKPRFDAMQSAFNEDTRMIHLRNLIALLRDKKIGFDYGQLAQDLRSLQNPRRRNGVLLRWGRDFANGTFRGRANTEES
>NZ_LT906481.1|WP_012361196.1|1610118_1611801_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGSNETFNLVHEPWIKCRTAEGNQLLSIRQVFDGSAKPLAVVGDSPTQDYAVLRVLLAIFWRAHYHDFVRRYPSPRSRKKFEWETWFLDTRETLRETGKDEVVLGYLADVENRFDLLDPTVPFMQVADLHTAKNTSNEIRRILPDSEDSYFTMRTGPGRVSISYDEAARWLIHAQAYDYSGIKSGAVGDPRVKGGRGYPIGQGWSGLTGGTVIRGANLLETLVLNTTESCIPTAAETDKPVWEREPDTAAPQDLEATQPKGPADLATWQSRRIRLFTEDGVVTRVLVSNGDRIPNAGLNVFGDPMTPYRFSKNKSKKGFEAYYPRPYDEQRTTWRSLDALVAVDGDPGFSSRELPPKRPENVDNVARILEDREVLDLQIVSMAYGPQSSTYGTIVSSSIGLPVHLLRNSEWSRAVRNDVRNSAEATGRAATAVGAFAGQLYVAAGGEYEFGVDAADRLYAQLEPRFHNWLRGLDPKNMAQEVSSWQHTVREAALGIAQDLLNGAGQKALIGRLLDEDSGGRVINAGTAFQQLKRKLNKELPLTAPQKTMSEEGEGNGERS

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Crispr_ID: NZ_LT906481_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906481_7

1601243-1605480

TypeI-E

I-E

Consensus_repeat	Method
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CRISPRCasFinder
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CRT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	PILER-CR

69 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_LT906481_7

>merge|NZ_LT906481|7|1601243-1605480|CRISPRCasFinder,CRT,PILER-CR
GGCTCATCCCCGCTGGCGCGGGGAGCACTCGGGGCTGTGGCTGCTGTCGGTAACGCAGGCGGGCTCATCCCCGCTGACGCGGGGAGCACGAGGTGCTTAGTCAGTTCCTCGGCGTACCCCTCGGCTCATCCCCGCTGACGCGGGGAGCACGGCCCACGTGGTCTCGGTGCTCTGGTAGGTGGCGGCTCATCCCCGCTGACGCGGGGAGCACCTACCCCCGTTGCTACCCCCGTTGGTGGGGTTGGGCTCATCCCCGCTGACGCGGGGAGCACAGCCGAACCCGAACCGGGCGGACCAGTCCAGAAGGCTCATCCCCGCTGGCGCGGGGAGCACTGCTGCGCACCGAGGGTGTTTTGCCGGAGTGTGGGCTCATCCCCGCTGGCGCGGGGAGCACTCGTTTGAGCCGATCGGGCAGGTGATTGATCTGGGCTCATCCCCGCTGGCGCGGGGAGCACTTGGGAAGCCTGCGCCGGGGTCTGTGTGGTCGGGGCTCATCCCCGCTGGCGCGGGGAGCACAAGCCCATGCGTCTCACCGGGGCCCACTGTAGGGGCTCATCCCCGCTGGCGCGGGGAGCACAGTCGACTACTGTGCCCGGCGCGTAGCGCGTTGGGCTCATCCCCGCTGGCGCGGGGAGCACAGACCATCACCGCTTTCCCGCCGACTTCGGAGGGGCTCATCCCCGCTGGCGCGGGGAGCACGGAATCACCTACCACGAGGAAACAACCCTCGGCGGCTCATCCCCGCTGGCGCGGGGAGCACTCACCCGGGCGCAGCATCGGGGTGAACGTGATGGGCTCATCCCCGCTGGCGCGGGGAGCACCACATGGGCCGTCCCGACCTCACCCCCGACCTGGGCTCATCCCCGCTGGCGCGGGGAGCACTCTACTGCGATTCAGTGGGCGTGGGAGAACGTGGGCTCATCCCCGCTGGCGCGGGGAGCACATAGCCTTAGCAGTGGCTTTATCCGACGTGTCGGGCTCATCCCCGCTGGCGCGGGGAGCACACATCCCTCGATGTGTTCACAAGCCGCGCCTCAGGCTCATCCCCGCTGGCGCGGGGAGCACGACACCACAATCGCGGTGCCGTGCTTGTGAGTGGGCTCATCCCCGCTGGCGCGGGGAGCACAGGCGACGGATCACGAAACCGGCTTTACCGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCAACCCTTAGAGAATCTATCGACGTTGCCCCTGGGCTCATCCCCGCTGGCGCGGGGAGCACGCGGGGTAGTAAACGCGCCCGGTGCGCCCCTCCGGCTCATCCCCGCTGGCGCGGGGAGCACTCACGGGTGAGGATTGCCAGGGCGTTGCCGGCAGGCTCATCCCCGCTGGCGCGGGGAGCACTTCTTCAGCACCACGTAGATCGTCGTCGCGGTGGGCTCATCCCCGCTGGCGCGGGGAGCACTCTTCCTCGACCTGTTCGGGTGTCCAGTCCGGGGGCTCATCCCCGCTGGCGCGGGGAGCACTGCTGGTTCCTGCTATGGAGTTCGCGTCTGGCGGGCTCATCCCCGCTGGCGCGGGGAGCACTTCGTGTAATCCTGCAGCCTCCACCGCATGGTGGGCTCATCCCCGCTGGCGCGGGGAGCACAACCGCAACGGAAAACAGCAACTCGCAGCCCCCGGCTCATCCCCGCTGGCGCGGGGAGCACGGGTTCTCGGCGGCCATGTTGCCGATGTACAGCGGCTCATCCCCGCTGGCGCGGGGAGCACGTCGTTGTAGGTGCAGTCGCCGTGGATCACGGCGGCTCATCCCCGCTGGCGCGGGGAGCACTTCCCGGTGGACCAGGTGCGCCAGTCGTCTGTGGGCTCATCCCCGCTGGCGCGGGGAGCACATCAACGCCCGCCAGTTCTTCCAGACGCTCAGAGGCTCATCCCCGCTGGCGCGGGGAGCACATATGCGGATCATCAGACCACCCACACAACGTGGGCTCATCCCCGCTGGCGCGGGGAGCACTCCACCGGCTTCGTAACCTCTGCCCCTGTGCTGGGCTCATCCCCGCTGGCGCGGGGAGCACTTGATCGTGCCCGCGACGATCACCGGGGCCCCCGGCTCATCCCCGCTGGCGCGGGGAGCACAGAATCGCCGTAGCGATCACACCAATAGTGGCCGGCTCATCCCCGCTGGCGCGGGGAGCACTCATCAGCGTTACCGGCGACCATGCTCCACGCCGGCTCATCCCCGCTGGCGCGGGGAGCACGCGGTTATGGCTGGCGGTGGGCTGCTGAAGTGGGGCTCATTCCCGCTGGCGCGGGGAGCACTGCCTAGTTATCGGACGGCTCCGTCCATGAGACGGCTCATCCCCGCTGGCGCGGGGAGCACTTCTGGACTCCTTGGTCACGGGGGTGGGTTTCCGGCTCATCCCCGCTGGCGCGGGGAGCACCTGGTGGCTGCCGCGGTCGCCGCGTGGGCGGGGGGCTCATCCCCGCTGGCGCGGGGAGCACGTGCCCTTTCTGGCGTTTGTGGCTGGGACTGTGGGCTCATCCCCGCTGGCGCGGGGAGCACTGTGACGGAGTTTCCGTTGTTCGCGTAGCGCAGGGCTCATCCCCGCTGGCGCGGGGAGCACGTGAAGGAGGGTGCCGAATGACCGATGTCATGAGGCTCATCCCCGCTGGCGCGGGGAGCACGGGCTGTCGATCGCCCGCCTGGGCTTGGTGGTGGGCTCATCCCCGCTGGCGCGGGGAGCACTGGTGGCGGTAGCCCGCCCCCGGTAGGTGGCGGGGCTCATCCCCGCTGGCGCGGGGAGCACCTAGGGGAAATGGATATTCTCCATTCCGCGCACGGCTCATCCCCGCTGGCGCGGGGAGCACATGATCGCCTGCGACAGAATCTCCCACGCGGCCGGCTCATCCCCGCTGGCGCGGGGAGCACGGCAGGGCTGGCACTTGGCGCGTCGCGCCCGGGGGCTCATCCCCGCTGGCGCGGGGAGCACCCTACCTTTTCTCCACCATTCAGTGGGGGCTCCGGCTCATCCCCGCTGGCGCGGGGAGCACTGCTCGGACGCGGCGACCTGACGCTCCAGGCTCGGCTCATCCCCGCTGGCGCGGGGAGCACACAAGCTCAAACGACAGGCCACGCGCCGTTTTCGGCTCATCCCCGCTGGCGCGGGGAGCACCGTGAGTTAACGCCTTTTGAGTCCTCGGCGGTGGGCTCATCCCCGCTGGCGCGGGGAGCACAGTCGAATTTCTTCTCGCAGTCGGAGCAGACAGGGCTCATCCCCGCTGGCGCGGGGAGCACCTCAAATCAAGCCCAGAATGGCGTGGTAAAGGGGGCTCATCCCCGCTGGCGCGGGGAGCACGCACTCGAGGTTTCATCGAATCCCTTCTTTGCCGGCTCATCCCCGCTGGCGCGGGGAGCACACGCCCCCGCCCCGGCGGATAACGTGATTCTGAGGCTCATCCCCGCTGGCGCGGGGAGCACATTAGGCCCGCCTTCATTTCCGGTAACGCCGCCGGCTCATCCCCGCTGGCGCGGGGAGCACAGTACACCGAGGACTTCAACGAGTTTTGGAGCCGGCTCATCCCCGCTGGCGCGGGGAGCACGTGTCGTCTGTGGTGGTGCCTGAGCCTGGCTACGGCTCATCCCCGCTGGCGCGGGGAGCACGAGGAGTTTGAGCGCATTAGGGACGGCCGTGAGGGCTCATCCCCGCTGGCGCGGGGAGCACGACTCCTCCAGCTGCTTCATCACACCCTCGGCCGGCTCATCCCCGCTGGCGCGGGGAGCACCTGTGGATCAGCTCCAGCAGCTCCTTGCCGTAGGGCTCATCCCCGCTGGCGCGGGGAGCACTTCCCCCAAGTCGCCCTTCGGCGCCTCAGGGAGCGGCTCATCCCCGCTGGCGCGGGGAGCACTTAAGGGCATGAGTAAGGAGTTCGCTAAGAACCGGCTCATCCCCGCTGGCGCGGGGAGCACCCTGTTCGAGAAGCTTTAGTCTTCTCACTCGACGGCTCATCCCCGCTGGCGCGGGGAGCACTGGCGCCTAGCCCCGTATGTTACATTTCGCAACGGCTCATCCCCGCTGGCGCGGGGAGCACCAACAGTTCAACCATGAGGGGTCTACACACCCGGGCTCATCCCCGCTGGCGCGGGGAGCACTTGCTGGCCGCTTTTGTTCCGTATTTTGGGATGGGCTCATCCCCGCTGGCGCGGGGAGCACATTTTCATGATGGAGTCCTTGAAGGACTTCGCCGGCTCATCCCCGCTGGCGCGGGGAGCAC

>NZ_LT906481|7|7|1601243-1605480|CRISPRCasFinder
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGGGGCTGTGGCTGCTGTCGGTAACGCAGGCG
GGCTCATCCCCGCTGACGCGGGGAGCAC	GAGGTGCTTAGTCAGTTCCTCGGCGTACCCCTC
GGCTCATCCCCGCTGACGCGGGGAGCAC	GGCCCACGTGGTCTCGGTGCTCTGGTAGGTGGC
GGCTCATCCCCGCTGACGCGGGGAGCAC	CTACCCCCGTTGCTACCCCCGTTGGTGGGGTTG
GGCTCATCCCCGCTGACGCGGGGAGCAC	AGCCGAACCCGAACCGGGCGGACCAGTCCAGAA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTGCGCACCGAGGGTGTTTTGCCGGAGTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTTGAGCCGATCGGGCAGGTGATTGATCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGGGAAGCCTGCGCCGGGGTCTGTGTGGTCGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AAGCCCATGCGTCTCACCGGGGCCCACTGTAGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTCGACTACTGTGCCCGGCGCGTAGCGCGTTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCATCACCGCTTTCCCGCCGACTTCGGAGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAATCACCTACCACGAGGAAACAACCCTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCCGGGCGCAGCATCGGGGTGAACGTGATG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CACATGGGCCGTCCCGACCTCACCCCCGACCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTACTGCGATTCAGTGGGCGTGGGAGAACGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATAGCCTTAGCAGTGGCTTTATCCGACGTGTCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACATCCCTCGATGTGTTCACAAGCCGCGCCTCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GACACCACAATCGCGGTGCCGTGCTTGTGAGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGCGACGGATCACGAAACCGGCTTTACCGTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CAACCCTTAGAGAATCTATCGACGTTGCCCCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGGGGTAGTAAACGCGCCCGGTGCGCCCCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACGGGTGAGGATTGCCAGGGCGTTGCCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTTCAGCACCACGTAGATCGTCGTCGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTTCCTCGACCTGTTCGGGTGTCCAGTCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTGGTTCCTGCTATGGAGTTCGCGTCTGGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCGTGTAATCCTGCAGCCTCCACCGCATGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AACCGCAACGGAAAACAGCAACTCGCAGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGTTCTCGGCGGCCATGTTGCCGATGTACAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGTTGTAGGTGCAGTCGCCGTGGATCACGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCGGTGGACCAGGTGCGCCAGTCGTCTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCAACGCCCGCCAGTTCTTCCAGACGCTCAGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATATGCGGATCATCAGACCACCCACACAACGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCCACCGGCTTCGTAACCTCTGCCCCTGTGCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGATCGTGCCCGCGACGATCACCGGGGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAATCGCCGTAGCGATCACACCAATAGTGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATCAGCGTTACCGGCGACCATGCTCCACGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGGTTATGGCTGGCGGTGGGCTGCTGAAGTGG
GGCTCATTCCCGCTGGCGCGGGGAGCAC	TGCCTAGTTATCGGACGGCTCCGTCCATGAGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTGGACTCCTTGGTCACGGGGGTGGGTTTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGGTGGCTGCCGCGGTCGCCGCGTGGGCGGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGCCCTTTCTGGCGTTTGTGGCTGGGACTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGACGGAGTTTCCGTTGTTCGCGTAGCGCAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGAAGGAGGGTGCCGAATGACCGATGTCATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCTGTCGATCGCCCGCCTGGGCTTGGTGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGTGGCGGTAGCCCGCCCCCGGTAGGTGGCGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTAGGGGAAATGGATATTCTCCATTCCGCGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATGATCGCCTGCGACAGAATCTCCCACGCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCAGGGCTGGCACTTGGCGCGTCGCGCCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTACCTTTTCTCCACCATTCAGTGGGGGCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTCGGACGCGGCGACCTGACGCTCCAGGCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAAGCTCAAACGACAGGCCACGCGCCGTTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGTGAGTTAACGCCTTTTGAGTCCTCGGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTCGAATTTCTTCTCGCAGTCGGAGCAGACAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCAAATCAAGCCCAGAATGGCGTGGTAAAGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCACTCGAGGTTTCATCGAATCCCTTCTTTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACGCCCCCGCCCCGGCGGATAACGTGATTCTGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTAGGCCCGCCTTCATTTCCGGTAACGCCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTACACCGAGGACTTCAACGAGTTTTGGAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGTCGTCTGTGGTGGTGCCTGAGCCTGGCTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAGGAGTTTGAGCGCATTAGGGACGGCCGTGAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GACTCCTCCAGCTGCTTCATCACACCCTCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGTGGATCAGCTCCAGCAGCTCCTTGCCGTAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCCCAAGTCGCCCTTCGGCGCCTCAGGGAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTAAGGGCATGAGTAAGGAGTTCGCTAAGAACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTGTTCGAGAAGCTTTAGTCTTCTCACTCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGCGCCTAGCCCCGTATGTTACATTTCGCAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CAACAGTTCAACCATGAGGGGTCTACACACCCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGCTGGCCGCTTTTGTTCCGTATTTTGGGATG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTTTCATGATGGAGTCCTTGAAGGACTTCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC

>NZ_LT906481|7|1|1601243-1605480|CRT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGGGGCTGTGGCTGCTGTCGGTAACGCAGGCG
GGCTCATCCCCGCTGACGCGGGGAGCAC	GAGGTGCTTAGTCAGTTCCTCGGCGTACCCCTC
GGCTCATCCCCGCTGACGCGGGGAGCAC	GGCCCACGTGGTCTCGGTGCTCTGGTAGGTGGC
GGCTCATCCCCGCTGACGCGGGGAGCAC	CTACCCCCGTTGCTACCCCCGTTGGTGGGGTTG
GGCTCATCCCCGCTGACGCGGGGAGCAC	AGCCGAACCCGAACCGGGCGGACCAGTCCAGAA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTGCGCACCGAGGGTGTTTTGCCGGAGTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTTGAGCCGATCGGGCAGGTGATTGATCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGGGAAGCCTGCGCCGGGGTCTGTGTGGTCGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AAGCCCATGCGTCTCACCGGGGCCCACTGTAGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTCGACTACTGTGCCCGGCGCGTAGCGCGTTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCATCACCGCTTTCCCGCCGACTTCGGAGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAATCACCTACCACGAGGAAACAACCCTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCCGGGCGCAGCATCGGGGTGAACGTGATG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CACATGGGCCGTCCCGACCTCACCCCCGACCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTACTGCGATTCAGTGGGCGTGGGAGAACGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATAGCCTTAGCAGTGGCTTTATCCGACGTGTCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACATCCCTCGATGTGTTCACAAGCCGCGCCTCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GACACCACAATCGCGGTGCCGTGCTTGTGAGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGCGACGGATCACGAAACCGGCTTTACCGTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CAACCCTTAGAGAATCTATCGACGTTGCCCCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGGGGTAGTAAACGCGCCCGGTGCGCCCCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACGGGTGAGGATTGCCAGGGCGTTGCCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTTCAGCACCACGTAGATCGTCGTCGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTTCCTCGACCTGTTCGGGTGTCCAGTCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTGGTTCCTGCTATGGAGTTCGCGTCTGGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCGTGTAATCCTGCAGCCTCCACCGCATGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AACCGCAACGGAAAACAGCAACTCGCAGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGTTCTCGGCGGCCATGTTGCCGATGTACAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGTTGTAGGTGCAGTCGCCGTGGATCACGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCGGTGGACCAGGTGCGCCAGTCGTCTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCAACGCCCGCCAGTTCTTCCAGACGCTCAGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATATGCGGATCATCAGACCACCCACACAACGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCCACCGGCTTCGTAACCTCTGCCCCTGTGCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGATCGTGCCCGCGACGATCACCGGGGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAATCGCCGTAGCGATCACACCAATAGTGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATCAGCGTTACCGGCGACCATGCTCCACGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGGTTATGGCTGGCGGTGGGCTGCTGAAGTGG
GGCTCATTCCCGCTGGCGCGGGGAGCAC	TGCCTAGTTATCGGACGGCTCCGTCCATGAGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTGGACTCCTTGGTCACGGGGGTGGGTTTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGGTGGCTGCCGCGGTCGCCGCGTGGGCGGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGCCCTTTCTGGCGTTTGTGGCTGGGACTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGACGGAGTTTCCGTTGTTCGCGTAGCGCAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGAAGGAGGGTGCCGAATGACCGATGTCATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCTGTCGATCGCCCGCCTGGGCTTGGTGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGTGGCGGTAGCCCGCCCCCGGTAGGTGGCGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTAGGGGAAATGGATATTCTCCATTCCGCGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATGATCGCCTGCGACAGAATCTCCCACGCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCAGGGCTGGCACTTGGCGCGTCGCGCCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTACCTTTTCTCCACCATTCAGTGGGGGCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTCGGACGCGGCGACCTGACGCTCCAGGCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAAGCTCAAACGACAGGCCACGCGCCGTTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGTGAGTTAACGCCTTTTGAGTCCTCGGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTCGAATTTCTTCTCGCAGTCGGAGCAGACAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCAAATCAAGCCCAGAATGGCGTGGTAAAGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCACTCGAGGTTTCATCGAATCCCTTCTTTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACGCCCCCGCCCCGGCGGATAACGTGATTCTGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTAGGCCCGCCTTCATTTCCGGTAACGCCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTACACCGAGGACTTCAACGAGTTTTGGAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGTCGTCTGTGGTGGTGCCTGAGCCTGGCTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAGGAGTTTGAGCGCATTAGGGACGGCCGTGAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GACTCCTCCAGCTGCTTCATCACACCCTCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGTGGATCAGCTCCAGCAGCTCCTTGCCGTAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCCCAAGTCGCCCTTCGGCGCCTCAGGGAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTAAGGGCATGAGTAAGGAGTTCGCTAAGAACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTGTTCGAGAAGCTTTAGTCTTCTCACTCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGCGCCTAGCCCCGTATGTTACATTTCGCAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CAACAGTTCAACCATGAGGGGTCTACACACCCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGCTGGCCGCTTTTGTTCCGTATTTTGGGATG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTTTCATGATGGAGTCCTTGAAGGACTTCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC

>NZ_LT906481|7|1|1602524-1605480|PILER-CR
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACGGGTGAGGATTGCCAGGGCGTTGCCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTTCAGCACCACGTAGATCGTCGTCGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTTCCTCGACCTGTTCGGGTGTCCAGTCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTGGTTCCTGCTATGGAGTTCGCGTCTGGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCGTGTAATCCTGCAGCCTCCACCGCATGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AACCGCAACGGAAAACAGCAACTCGCAGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGTTCTCGGCGGCCATGTTGCCGATGTACAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGTTGTAGGTGCAGTCGCCGTGGATCACGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCGGTGGACCAGGTGCGCCAGTCGTCTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCAACGCCCGCCAGTTCTTCCAGACGCTCAGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATATGCGGATCATCAGACCACCCACACAACGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCCACCGGCTTCGTAACCTCTGCCCCTGTGCTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGATCGTGCCCGCGACGATCACCGGGGCCCCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAATCGCCGTAGCGATCACACCAATAGTGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATCAGCGTTACCGGCGACCATGCTCCACGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGGTTATGGCTGGCGGTGGGCTGCTGAAGTGG
GGCTCATTCCCGCTGGCGCGGGGAGCAC	TGCCTAGTTATCGGACGGCTCCGTCCATGAGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTGGACTCCTTGGTCACGGGGGTGGGTTTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGGTGGCTGCCGCGGTCGCCGCGTGGGCGGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGCCCTTTCTGGCGTTTGTGGCTGGGACTGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGACGGAGTTTCCGTTGTTCGCGTAGCGCAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGAAGGAGGGTGCCGAATGACCGATGTCATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCTGTCGATCGCCCGCCTGGGCTTGGTGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGTGGCGGTAGCCCGCCCCCGGTAGGTGGCGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTAGGGGAAATGGATATTCTCCATTCCGCGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATGATCGCCTGCGACAGAATCTCCCACGCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCAGGGCTGGCACTTGGCGCGTCGCGCCCGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTACCTTTTCTCCACCATTCAGTGGGGGCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTCGGACGCGGCGACCTGACGCTCCAGGCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAAGCTCAAACGACAGGCCACGCGCCGTTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGTGAGTTAACGCCTTTTGAGTCCTCGGCGGTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTCGAATTTCTTCTCGCAGTCGGAGCAGACAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCAAATCAAGCCCAGAATGGCGTGGTAAAGGG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCACTCGAGGTTTCATCGAATCCCTTCTTTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACGCCCCCGCCCCGGCGGATAACGTGATTCTGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTAGGCCCGCCTTCATTTCCGGTAACGCCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGTACACCGAGGACTTCAACGAGTTTTGGAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGTCGTCTGTGGTGGTGCCTGAGCCTGGCTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAGGAGTTTGAGCGCATTAGGGACGGCCGTGAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GACTCCTCCAGCTGCTTCATCACACCCTCGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGTGGATCAGCTCCAGCAGCTCCTTGCCGTAG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCCCCCAAGTCGCCCTTCGGCGCCTCAGGGAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTAAGGGCATGAGTAAGGAGTTCGCTAAGAACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCTGTTCGAGAAGCTTTAGTCTTCTCACTCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGGCGCCTAGCCCCGTATGTTACATTTCGCAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CAACAGTTCAACCATGAGGGGTCTACACACCCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTGCTGGCCGCTTTTGTTCCGTATTTTGGGATG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATTTTCATGATGGAGTCCTTGAAGGACTTCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906481.1\|WP_012361194.1\|1608260_1609391_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_LT906481.1\|WP_012361189.1\|1598888_1599128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361183.1\|1593254_1594670_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_LT906481.1\|WP_012361186.1\|1596808_1597690_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_141759414.1\|1597984_1598206_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_169847096.1\|1599306_1600338_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT906481.1\|WP_012361195.1\|1609439_1610135_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_LT906481.1\|WP_169847100.1\|1611964_1614730_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_LT906481.1\|WP_012361180.1\|1592176_1592578_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_081477625.1\|1598442_1598892_+\|EndoU-domain-containing-protein	unknown	unknown	unknown
NZ_LT906481.1\|WP_012361192.1\|1606837_1607542_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_LT906481.1\|WP_041628535.1\|1605555_1605900_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_LT906481.1\|WP_012361191.1\|1605896_1606835_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|187850
NZ_LT906481.1\|WP_012361184.1\|1594701_1595460_+\|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase	unknown	unknown	gnl\|CDD\|181162
NZ_LT906481.1\|WP_012361198.1\|1615239_1616817_+\|sodium:glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_LT906481.1\|WP_012361199.1\|1617093_1618548_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_LT906481.1\|WP_012361182.1\|1592725_1593100_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|224861
NZ_LT906481.1\|WP_012361185.1\|1595650_1596556_-\|cutinase-family-protein	unknown	unknown	gnl\|CDD\|366455
NZ_LT906481.1\|WP_012361196.1\|1610118_1611801_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_LT906481.1\|WP_012361193.1\|1607538_1608261_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776

Protein	Function_ID	Function_description	E-value
NZ_LT906481.1\|WP_012361183.1\|1593254_1594670_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.51866e-56
NZ_LT906481.1\|WP_169847096.1\|1599306_1600338_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	6.23873e-107
NZ_LT906481.1\|WP_012361195.1\|1609439_1610135_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.84125e-35
NZ_LT906481.1\|WP_169847100.1\|1611964_1614730_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	4.38171e-84
NZ_LT906481.1\|WP_012361182.1\|1592725_1593100_+\|phage-holin-family-protein	gnl\|CDD\|224861	COG1950, COG1950, Predicted membrane protein [Function unknown].	1.2332e-15
NZ_LT906481.1\|WP_012361194.1\|1608260_1609391_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.02394e-166
NZ_LT906481.1\|WP_041628535.1\|1605555_1605900_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.14143e-42
NZ_LT906481.1\|WP_012361196.1\|1610118_1611801_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	5.91798e-116
NZ_LT906481.1\|WP_012361191.1\|1605896_1606835_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.39339e-122
NZ_LT906481.1\|WP_012361184.1\|1594701_1595460_+\|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase	gnl\|CDD\|181162	PRK07904, PRK07904, decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase.	1.19704e-160
NZ_LT906481.1\|WP_012361198.1\|1615239_1616817_+\|sodium:glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	2.42847e-52
NZ_LT906481.1\|WP_012361199.1\|1617093_1618548_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.13895e-64
NZ_LT906481.1\|WP_012361185.1\|1595650_1596556_-\|cutinase-family-protein	gnl\|CDD\|366455	pfam01083, Cutinase, Cutinase.	1.00722e-06
NZ_LT906481.1\|WP_012361192.1\|1606837_1607542_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.47561e-77
NZ_LT906481.1\|WP_012361193.1\|1607538_1608261_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.72304e-45

>NZ_LT906481.1|WP_169847096.1|1599306_1600338_-|IS30-family-transposase
MEVLPQAAVEKVIDRRYLSLVERERIADRVNRNLSVRAIARELGRDPGTISREISRNSGDDGIYRPFEAHRKSTLRRFRPKVSKIAANPRLKQQVWQWLRMEFSPEQVAGRLRREFPGDETMHVSHETIYQELYCQARGELKKVVAHALRTGRTRRKPRGQRVARSRFVDPMIMIADRPAVVEDRAVPGHWEGDLIIGAGGRSAIGTLVERTTRYVMLLHLPDGHGAVAVRDALVEAIMTLPQHLRGSLTWDQGSEMAGHRSFSIATDCPVYFCDPGSPWQRGTNENTNGLLRQYFPKGADLSVYGREELELVAHRLNCRPRKTLGFATPAERMAELLDLAES
>NZ_LT906481.1|WP_012361189.1|1598888_1599128_+|hypothetical-protein
MRVEEAVRELLDLPELSDSGARFRLECGEVADAASYLIEDVAEAGVDITNEQRKALLEGLMEYARGDNDIYEAYARLLA
>NZ_LT906481.1|WP_081477625.1|1598442_1598892_+|EndoU-domain-containing-protein
MTTAPYLGGEPVPDVAKLVKHSVWGWRHGDGEIQPDAPRNGHTFDSVRRKGTFFPRSWSDQEIAEAITTTIESPDFVKARAVRRVVYRDINDVMVTVEWDYVKGTAKGNTAYPTFGNGVARFVPSKNERVEWSQDHEKTMRKARRVIQE
>NZ_LT906481.1|WP_141759414.1|1597984_1598206_-|hypothetical-protein
MSVLSGKSPGSALAGARELKRKIDWRATMGIIDSLQAWAGEHETFIFILFMLPFAIGLSFLFEGGDGGDYGGD
>NZ_LT906481.1|WP_012361186.1|1596808_1597690_-|hypothetical-protein
MSLKNAAKRLAAAAATILAATGLMLGTGQPIAAAASSGSSGSSLSSGSSGSSGSSLGSSLGSSEARLDGMSFNQSRIIRGGASFWVQRADGSVNPCTVTNVVRRGHTNYAVTAGHCISGHVTQIRHKGQVIADAADVRAGWHIVQGNKRPGGHFINDFGYFRLKPNVKVQYNVVHLDRVHPVHQPASAATRAIHRRAVSAPFGAPLRVHQGMVGRIACKEGNTTGLTCGPIVRVNEKTQDVSGLIPSRPGDSGAPLYLLGRDGKRHLIGQLAGGTHYVYKSYDGYVHNLARIK
>NZ_LT906481.1|WP_012361185.1|1595650_1596556_-|cutinase-family-protein
MGMKKFAAKLAAAALTGVLALGGAATIGGGANNGLLASADAAPVGSGFAFTPTAQGACTSTMVIAIPGGGNTVDGVPDSVPHGFLVGQVANQLSAHGIAQRTVSYRATPFFTLSYDQSMRQGYAKARQLIAQTAAHCPNAKFALVGFSEGSDIASHIIADINAGRGPIPAKRFATAALIANPHNGPESKHKGGTLRDGEGILGAMRGYGKLGDRVLDICNIDDFVCNRYAATPGARAIAKDMLHASAANGYAGLNPMQVVGEAPRIAMGTRQHTKTYQFISPIPHAVGHVLAHRDLPKAED
>NZ_LT906481.1|WP_012361184.1|1594701_1595460_+|decaprenylphospho-beta-D-erythro-pentofuranosid--2-ulose-2-reductase
MIDAVGKPQSILLLGGASDMGLAVVEEFLSRGPARVVLAAREGESLDDATRRCQAAGASEVETLAFDAVDFDSHPAVIDKAFAAGDIDIAIVAFGILGDNEKQWQDQKLAVQAAQVNFTGAVSVGVLLGQKMKEQGHGQIIAFSTVAGEMVRRSNFVYGSTKAGTDGFYRLLGEALRGTGVRVLTVRPGQVRTNMTKDLDDAPLTVDKTDAAKAIAKAVDDKKTIVWVHPLFRPIMLVLKHLPMWVLRKLPI
>NZ_LT906481.1|WP_012361183.1|1593254_1594670_+|FAD-binding-oxidoreductase
MSIHTTTKTLTGWGRTQATTAEVLSTPDVETIAKAVAQVADDNADKPSHLKRGVIARGMGRSYGDPTNNAGGLVIDMRELNKIHDIDPDTAIVDVDAGVTLDQLMKAALPYGLWVPVLPGTRQVTIGGAIGPDIHGKNHHSAGSFGDHVLSMELLVADGRVLHLEPEGTPDDPKGELFWATVGGMGLTGIILRARIEMTRTETAYFIADGDLTHSLDETIEFHSDGSERNYTYSSAWFDAISGGSKLGRAAISRGSLATLDQLKELSPKLAKDPLKFNAPQLMTVPDIFPNFTMNKLSMIAIGELWWLKSGEYRNQVQNLTQFYQPLDLIGEWNRGYGSKGFLQYQFVVPTEAVEPFKQIIKDIQASGHYSALNVFKLFGEGNRAPLSYPMPGWNVCVDFPIKPGLGKFLDDLDRRVMEFGGRLYLAKESRTSAENFHKMYPGMEGWLKTRHNIDPTGVFASDMSRRLELH
>NZ_LT906481.1|WP_012361182.1|1592725_1593100_+|phage-holin-family-protein
MRCALDVVVTAVALWLVTLVIPGVSVMGGIGAFIWAALVFMFVNAFIAPVVRLLSLPLRILTLGLFSLIVNALLFSLVGWISSGIGNGLVVSGFWAAFFGAIFMAIATWIVEGTLKAIGIGSAL
>NZ_LT906481.1|WP_012361180.1|1592176_1592578_+|hypothetical-protein
MLSILPRQPGAPLARPQRPTGTCLQPRLEFLGMAGLFEKLSTGLSNIVGKQPKEQKEPPLRVGGVGEETTYEAAERTQLPLNSWMTRMMAQELPIMDSVSRQRVRDILRDYDGPEITSIEELPEEIRTIMDLY
>NZ_LT906481.1|WP_041628535.1|1605555_1605900_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLIVTACPAGLRGDLTKWLMELAPGTFVGRPSARIRELLWDRTVELCKDGRALLVYSSNNEQGMEFRTHRHDWEPTDFDGLKLMMRKSDSEKTRRRTGWSRARQLRRKYEGR
>NZ_LT906481.1|WP_012361191.1|1605896_1606835_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MRTPQQVPIERQSLSQMGDRISFLYVERAVVSRDGNALTITDQRGVAHVPATQLAVLLLGTGTRITNAAMALLGDCGVSTVWVGERGVRYYAHGRPPAKSSRLAELQARVVTNQRKRLECARRMYGLRFPGEDVSKLTMAQLRGREGARMKRLYAAEAKRTGVAWNRRRYDPNDYDSSDPINQALTTGSAALYGIAHAVIVGLGFVPALGVIHTGTDRSFVYDVADLYKAEVSIPAAFNAVASGTEDVGPMVRRLVRDAVVEQRLMPRMVRDLKFVMSVPDDEPLSDIELMLWSELELTSAGINWAGEGVDQ
>NZ_LT906481.1|WP_012361192.1|1606837_1607542_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTFTKIQLNPHRREGRKLLSDPQRMHAAVRAAFPPELDESDARVLWRVDPGEHEHVLYVVGPEKPTGAVLVEQAGWDTLPAQTADYSRFLGKLTRGQRWRFELVANPTYAEPRKGGRGKVKAHVSVRHQIGWLYRKADAAGFGLAPRLDDEVSDEERSRWSEFDAPQVTERWTDVFHRNKAGGGRGRPVRIAKARFTGTLEVTDPELLRQALAQGIGRARGYGCGLLTLAPIG
>NZ_LT906481.1|WP_012361193.1|1607538_1608261_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAHSLLLLLKGPMQSWGDESRFSVRATATTPTKSGIVGLIAAAQGRRRTDGVEDLAKLRMAVRVDQSGSLLRDYQTAQPWLKNPGANASLVTRYFLSDAAFVAAVESEDRELLDQMAEALRRPAYPLYMGRRSCPVHPGLVIGVVDGDAESALRAHDTWHATAVHRKESPKKVSLAIYRDANPGEGGSVPRQDVPVSFSPEHRKYGWREVIRAEDVEIDNPDGDEKSATGDVFFETVMRA
>NZ_LT906481.1|WP_012361194.1|1608260_1609391_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSKIIDIYALQSLPPSLINRDDTGVPKNAIFGGVPRQRVSSQSWKRAIRRYFFENFDAANIGDRSKRLPEKIARQLEEQGMEQGTAIERTEQLFKAAGIKTAVEKKPKDKDETDAEVAYPQTGYLLFLSAHQIDNAVKAIQERDGKNFTKREAQAILDQEHSVDIAMFGRMVADDAAYNVDAAVQVAHALGIHDSAPEFDYFTAVDDLAEEGEETGAGMIGTVQMMSSTLYRYATVNLEGLAENLDSEDAAKQAAVEFVEAFIASMPTGKINTFANQTLPELVYVAVRDTRPVSLVNAFEAPVEATEDKGRREVGAEVLAQEARDVENVYGFKPQASFVMGLGQLAEPFTDIATQVTLPELKEQLAGAIDQLMGDE
>NZ_LT906481.1|WP_012361195.1|1609439_1610135_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MASDLKATAPSPGVAADVAGTGTAEAATPAEQRPNLKFAVGRTAEILQRDYLAGGNTAAANARGTLAELRKAGALKLENHPLALESVLMALLVPLSEREQGKSDHASPSERAAFYALTLFGQHMQSSQQQVHNSEQSFAAACGRLHATVESKSIKPRFDAMQSAFNEDTRMIHLRNLIALLRDKKIGFDYGQLAQDLRSLQNPRRRNGVLLRWGRDFANGTFRGRANTEES
>NZ_LT906481.1|WP_012361196.1|1610118_1611801_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGSNETFNLVHEPWIKCRTAEGNQLLSIRQVFDGSAKPLAVVGDSPTQDYAVLRVLLAIFWRAHYHDFVRRYPSPRSRKKFEWETWFLDTRETLRETGKDEVVLGYLADVENRFDLLDPTVPFMQVADLHTAKNTSNEIRRILPDSEDSYFTMRTGPGRVSISYDEAARWLIHAQAYDYSGIKSGAVGDPRVKGGRGYPIGQGWSGLTGGTVIRGANLLETLVLNTTESCIPTAAETDKPVWEREPDTAAPQDLEATQPKGPADLATWQSRRIRLFTEDGVVTRVLVSNGDRIPNAGLNVFGDPMTPYRFSKNKSKKGFEAYYPRPYDEQRTTWRSLDALVAVDGDPGFSSRELPPKRPENVDNVARILEDREVLDLQIVSMAYGPQSSTYGTIVSSSIGLPVHLLRNSEWSRAVRNDVRNSAEATGRAATAVGAFAGQLYVAAGGEYEFGVDAADRLYAQLEPRFHNWLRGLDPKNMAQEVSSWQHTVREAALGIAQDLLNGAGQKALIGRLLDEDSGGRVINAGTAFQQLKRKLNKELPLTAPQKTMSEEGEGNGERS
>NZ_LT906481.1|WP_169847100.1|1611964_1614730_-|CRISPR-associated-helicase-Cas3'
MSKLDAWLRGVSPQLAALWAKSGEEGEYLNLPQHLADVAATAGEVFDIWVADATKNDLSGELGIDVGELRRLVTWLAGLHDSGKASVNFQRLLEKKPGYDYLLNAVSDAGLPLDTGYREADLPAMPHSVASAAMLGEWLESETSVSSIMRRRLRSIVGAHHGIPADEKLRRDIEDALKDYPQAWRAVHKELLDGFAELTEIKPVLSKMSTPRAPELQLLTGIVVFADWIASNVDAFPLALQPMPQRLESGMAKTDITLPWKPTEPAEDVDEFFRRSFSWPEEFCARSVQRTMVEAARATEGPALYILEAETGVGKTEAALAAAHQLGAEDGVQGVYFAAPTMATANGLLDRTINWAQGTTGDTVASLYLAHSKNQLAEPYRALKYKGIAEDEAGGAAGKVVASQWMSGRRRGLLSNIVVGTVDQVLMLALVQRYSMLRHLALAGKVIIFDEVHSYDAYTSDYLKTTLSWLAYYGASVIVMTATLPTRQREELAEAYSGEPLRVESSAYPRITVVTEEKDEVWEPEPSPRNLDASLQVIGDELVELRALLDQLLAEGGCALVICNTIARAQQAYQELAEAYPDEVELHHAGFMAWERSQREDRLREELGPAARRGAGRPARKIVVATQVAEQSLDIDADVLITDLAPMDLVIQRIGRIHRHQRPTSDRPAALREPQVFIRGVVDRDGVPEIDKGAQAIYDPKILLATLLHLPERFRRPDDTAPLVEAVYGNIHAIPQEWAELWAEAERESRSREARAHARSATYRVPAASDAKEFESLFRGLNAAAQSLGDEERGAAQVRDSEPTVEVIPVMITDYGYRPLTPRSAEHSVEILSGVTPEFQQAWDLAMSTVRLPTRMTRWDEDFDAVVTQLEEETPPEWQEHFLLKGQLALRLDEKGEAEIGRFLVRYSSELGLEVMAKPRE
>NZ_LT906481.1|WP_012361198.1|1615239_1616817_+|sodium:glutamate-symporter
MTRRGPHFSLGRSPRRKQTQGGTLTPNQVGLALVLLGVMVLLGKTMRIKWGWTQKLFLPASILAGFLALFLGPEVFGSIASALGTDRFAEGGLFGEETLAVWKTLPGLLISVVFGTLFLGQKLPKPKEVVELAGPQLSVGVAFASGQYVVGIALVTFLLAPLFGINEAAGALIEIGFEGGHGTAAGMQSVFEDINWAEGYDLAVAVATVGLLSGIVIGVAVINWAIRTGRTEVITEVKDRSIEEQRGLFRRDEQYMAAKMTTRPSSVEPLSLHVAFLAVAIGVGVILLKALQWVEQMLWIDKIELLSYVPLFPMAMIGGIVVQLGLNFLGYEHLIDQNMMLRIQGLALDLLITAALATISLQAIANNFWAFLILCAGGILLNVFLLLWLAPRSIPEYWLERGVGDFGQSMGVTATGLILMRIVDPQAESPAFESFGYKQLVFEPFFGGGIITAVSIPFIIAVGPLPVLGVMTALFIFAIATGLFYWGRKFGIDRSKAAGGTKALGNHKANMEAKAAAAAAQQHKD
>NZ_LT906481.1|WP_012361199.1|1617093_1618548_-|MFS-transporter
MLVAAAFVVILNETTLSVALPVLMGYFEITADVAQWLVTSFMLTMAVVIPMTGYIMQRFSLRQVYAAAMLLFLAGTVLAVVAPVFPVLLVARIIQASGTALVIPLLMTTIMRLVPLERRGGVFGLVSVVIAVAPALGPTFSGLVLHSLGWRWIFILMLPLVVLALVVGLLLVRNFEEPTRPYLDVPSVFLSAVGFAATLYGMAGLSDLADGIPVARVAVMVGGIVVLAVFFGRQRALAREARAGKSAAAEEQGAGKRVREPLLDLAPLGERNYRLSLALMLLTFSMLFGFIILMPMFAQQVMGLSESQSGLAILPGGLAMGVMGPFVGRVYDARGTRVLTIPGSILTSAAMLGLVALGRDSSFWALTGVAVVLHIGIALLMTPLMSNALAAVPDALASHGQAILNTFQQVAAAGGTAIFIAIMTFGTQRAMNSTPGDAVGGLASGLNLAFLVGAVMSVVIVLFTVFVPLDAKKPMKEKKAQSDN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT906481_1	1.2\|390463\|25\|NZ_LT906481\|CRISPRCasFinder	390463-390487	25	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	705465-705489	2	0.92
NZ_LT906481_1	1.2\|390463\|25\|NZ_LT906481\|CRISPRCasFinder	390463-390487	25	MG869625	Polaromonas sp. W11N plasmid pW11NP2, complete sequence	13736-13760	3	0.88
NZ_LT906481_7	7.8\|1601698\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601698-1601730	33	NC_030912	Gordonia phage McGonagall, complete genome	3711-3743	3	0.909
NZ_LT906481_7	7.8\|1601698\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601698-1601730	33	KU998256	Gordonia phage Jeanie, complete genome	3711-3743	3	0.909
NZ_LT906481_1	1.2\|390463\|25\|NZ_LT906481\|CRISPRCasFinder	390463-390487	25	NZ_CP031358	Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence	97179-97203	4	0.84
NZ_LT906481_1	1.1\|390415\|25\|NZ_LT906481\|CRISPRCasFinder	390415-390439	25	FN436268	Acaryochloris phage A-HIS1, complete genome	31493-31517	5	0.8
NZ_LT906481_1	1.2\|390463\|25\|NZ_LT906481\|CRISPRCasFinder	390463-390487	25	NZ_CP053575	Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence	21722-21746	5	0.8
NZ_LT906481_1	1.2\|390463\|25\|NZ_LT906481\|CRISPRCasFinder	390463-390487	25	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	1069115-1069139	5	0.8
NZ_LT906481_7	7.21\|1602491\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602491-1602523	33	NZ_CP009405	Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence	2115-2147	5	0.848
NZ_LT906481_7	7.31\|1603101\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603101-1603133	33	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	241926-241958	5	0.848
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MN586025	Mycobacterium phage Mdavu, complete genome	16858-16890	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	KT281789	Mycobacterium phage Enkosi, complete genome	16870-16902	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MH020245	Mycobacterium phage SgtBeansprout, complete genome	16870-16902	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	KX808132	Mycobacterium phage Amelie, complete genome	16870-16902	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MH399770	Mycobacterium phage Biglebops, complete genome	16870-16902	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MF919518	Mycobacterium phage LilPharaoh, complete genome	16870-16902	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MK524485	Mycobacterium phage MissDaisy, complete genome	18546-18578	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MH926058	Mycobacterium phage Reptar3000, complete genome	18524-18556	6	0.818
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MK524488	Mycobacterium phage Patt, complete genome	18525-18557	6	0.818
NZ_LT906481_7	7.5\|1601515\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601515-1601547	33	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1420541-1420573	7	0.788
NZ_LT906481_7	7.14\|1602064\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602064-1602096	33	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	307493-307525	7	0.788
NZ_LT906481_7	7.14\|1602064\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602064-1602096	33	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	1031653-1031685	7	0.788
NZ_LT906481_7	7.24\|1602674\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602674-1602706	33	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	137484-137516	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MN234174	Mycobacterium phage Efra2, complete genome	16537-16569	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MN234165	Mycobacterium phage Yunkel11, complete genome	16553-16585	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MF140416	Mycobacterium phage LastHope, complete genome	16624-16656	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MG962371	Mycobacterium phage LaterM, complete genome	17289-17321	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MN234226	Mycobacterium phage Curiosium, complete genome	17047-17079	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NC_014459	Mycobacterium virus CrimD, complete genome	17299-17331	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	KM677211	Mycobacterium phage Murucutumbu, complete genome	17279-17311	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	MN234201	Mycobacterium phage Guanica15, complete genome	16553-16585	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	984541-984573	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	984641-984673	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	638973-639005	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	984373-984405	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	984318-984350	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1462395-1462427	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1203937-1203969	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1462402-1462434	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1374649-1374681	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1192383-1192415	7	0.788
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1319916-1319948	7	0.788
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	299254-299286	7	0.788
NZ_LT906481_7	7.40\|1603650\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603650-1603682	33	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	124227-124259	7	0.788
NZ_LT906481_7	7.9\|1601759\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601759-1601791	33	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	202694-202726	8	0.758
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NZ_CP019938	Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence	16908-16940	8	0.758
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	1546523-1546555	8	0.758
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	129129-129161	8	0.758
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	115854-115886	8	0.758
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	180618-180650	8	0.758
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1462382-1462414	8	0.758
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1426135-1426167	8	0.758
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1221984-1222016	8	0.758
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	JX403939	Pseudomonas phage YMC/01/01/P52_PAE_BP, complete genome	34700-34732	8	0.758
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	KU310943	Pseudomonas phage YMC11/07/P54_PAE_BP, complete genome	49999-50031	8	0.758
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP044550	Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence	156844-156876	8	0.758
NZ_LT906481_7	7.51\|1604321\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604321-1604353	33	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	398120-398152	8	0.758
NZ_LT906481_7	7.51\|1604321\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604321-1604353	33	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	398304-398336	8	0.758
NZ_LT906481_7	7.51\|1604321\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604321-1604353	33	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	534706-534738	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	101776-101808	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP014061	Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence	24893-24925	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	245172-245204	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP010864	Marinovum algicola DG 898 plasmid pMaD9, complete sequence	33851-33883	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	431534-431566	8	0.758
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	548028-548060	8	0.758
NZ_LT906481_7	7.5\|1601515\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601515-1601547	33	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1534887-1534919	9	0.727
NZ_LT906481_7	7.5\|1601515\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601515-1601547	33	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1539555-1539587	9	0.727
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	705-737	9	0.727
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	92663-92695	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP023519	Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence	140595-140627	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP007745	Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence	164509-164541	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1174349-1174381	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP022081	Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence	184584-184616	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	346581-346613	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP012984	Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416	131420-131452	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NC_009956	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence	73574-73606	9	0.727
NZ_LT906481_7	7.34\|1603284\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603284-1603316	33	NZ_CP034556	Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence	30430-30462	9	0.727
NZ_LT906481_7	7.40\|1603650\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603650-1603682	33	MN062714	Microbacterium Phage DirtyBubble, complete genome	14735-14767	9	0.727
NZ_LT906481_7	7.44\|1603894\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603894-1603926	33	MW091528	Bacteriophage sp. 438212, partial genome	30578-30610	9	0.727
NZ_LT906481_7	7.44\|1603894\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603894-1603926	33	MK494105	Mycobacterium phage Pinnie, complete genome	12473-12505	9	0.727
NZ_LT906481_7	7.48\|1604138\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604138-1604170	33	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	153753-153785	9	0.727
NZ_LT906481_7	7.48\|1604138\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604138-1604170	33	MN694444	Marine virus AFVG_250M1049, complete genome	43093-43125	9	0.727
NZ_LT906481_7	7.48\|1604138\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604138-1604170	33	MN694506	Marine virus AFVG_250M1048, complete genome	43860-43892	9	0.727
NZ_LT906481_7	7.50\|1604260\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604260-1604292	33	NZ_CP009886	Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete sequence	27001-27033	9	0.727
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	262686-262718	9	0.727
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	643898-643930	9	0.727
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	105371-105403	9	0.727
NZ_LT906481_7	7.62\|1604992\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604992-1605024	33	MN698239	Pelagibacter phage HTVC023P, complete genome	38604-38636	9	0.727
NZ_LT906481_7	7.1\|1601271\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1601271-1601303	33	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	40852-40884	10	0.697
NZ_LT906481_7	7.18\|1602308\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602308-1602340	33	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	346467-346499	10	0.697
NZ_LT906481_7	7.28\|1602918\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602918-1602950	33	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1523702-1523734	10	0.697
NZ_LT906481_7	7.31\|1603101\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603101-1603133	33	CP008939	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence	36748-36780	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NZ_CP013073	Sphingobium indicum B90A plasmid pSRL3, complete sequence	19747-19779	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NZ_CP005190	Sphingobium sp. MI1205 plasmid pMI1, complete sequence	152964-152996	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NZ_CP005191	Sphingobium sp. MI1205 plasmid pMI2, complete sequence	211330-211362	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NZ_CP005193	Sphingobium sp. MI1205 plasmid pMI4, complete sequence	25171-25203	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NZ_CP005090	Sphingobium sp. TKS plasmid pTK6, complete sequence	18515-18547	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NC_013970	Sphingomonas sp. MM-1 plasmid pISP3 DNA, complete sequence	790-822	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NC_020544	Sphingomonas sp. MM-1 plasmid pISP3, complete sequence	12441-12473	10	0.697
NZ_LT906481_7	7.37\|1603467\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603467-1603499	33	NC_014007	Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence	115422-115454	10	0.697
NZ_LT906481_7	7.40\|1603650\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603650-1603682	33	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	73169-73201	10	0.697
NZ_LT906481_7	7.57\|1604687\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604687-1604719	33	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	147474-147506	10	0.697
NZ_LT906481_7	7.59\|1604809\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1604809-1604841	33	NC_015163	Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence	23315-23347	10	0.697
NZ_LT906481_7	7.63\|1605053\|34\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1605053-1605086	34	NC_048097	Arthrobacter phage Yang, complete genome	26771-26804	10	0.706
NZ_LT906481_7	7.15\|1602125\|33\|NZ_LT906481\|CRISPRCasFinder,CRT	1602125-1602157	33	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	199235-199267	11	0.667
NZ_LT906481_7	7.24\|1602674\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1602674-1602706	33	NZ_KM017071	Sphingomonas sp. JE1 plasmid pJE1, complete sequence	103419-103451	11	0.667
NZ_LT906481_7	7.31\|1603101\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603101-1603133	33	KU682439	Stenotrophomonas phage vB_SmaS-DLP_6, complete genome	72350-72382	11	0.667
NZ_LT906481_7	7.31\|1603101\|33\|NZ_LT906481\|CRISPRCasFinder,CRT,PILER-CR	1603101-1603133	33	NZ_CP048424	Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence	189919-189951	11	0.667

1. spacer 1.2|390463|25|NZ_LT906481|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 2, identity: 0.92

tcttcttcgcgaccttgcgggtggc	CRISPR spacer
tcttcttcaccaccttgcgggtggc	Protospacer
********.* **************

2. spacer 1.2|390463|25|NZ_LT906481|CRISPRCasFinder matches to MG869625 (Polaromonas sp. W11N plasmid pW11NP2, complete sequence) position: , mismatch: 3, identity: 0.88

tcttcttcgcgaccttgcgggtggc	CRISPR spacer
gcttcttctcgaccttgccggtggc	Protospacer
 ******* ********* ******

3. spacer 7.8|1601698|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NC_030912 (Gordonia phage McGonagall, complete genome) position: , mismatch: 3, identity: 0.909

ttgggaagcctgcgccggggtctgtgtggtcgg	CRISPR spacer
gcgggaaccctgcgccggggtctgtgtggtcgg	Protospacer
 .***** *************************

4. spacer 7.8|1601698|33|NZ_LT906481|CRISPRCasFinder,CRT matches to KU998256 (Gordonia phage Jeanie, complete genome) position: , mismatch: 3, identity: 0.909

ttgggaagcctgcgccggggtctgtgtggtcgg	CRISPR spacer
gcgggaaccctgcgccggggtctgtgtggtcgg	Protospacer
 .***** *************************

5. spacer 1.2|390463|25|NZ_LT906481|CRISPRCasFinder matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

tcttcttcgcgaccttgcgggtggc	CRISPR spacer
gcttcttcgcgaccttgaggttggt	Protospacer
 **************** ** ***.

6. spacer 1.1|390415|25|NZ_LT906481|CRISPRCasFinder matches to FN436268 (Acaryochloris phage A-HIS1, complete genome) position: , mismatch: 5, identity: 0.8

tctttttcgccgtctttttagcggt	CRISPR spacer
aacttttcgccgtctttttcgcgga	Protospacer
  .**************** ****

7. spacer 1.2|390463|25|NZ_LT906481|CRISPRCasFinder matches to NZ_CP053575 (Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.8

tcttcttcgcgaccttgcgggtggc	CRISPR spacer
tctttttcgcgaccttgcgggcaaa	Protospacer
****.****************...

8. spacer 1.2|390463|25|NZ_LT906481|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.8

tcttcttcgcgaccttgcgggtggc	CRISPR spacer
cgaccttcgtgaccttgcgggtggc	Protospacer
.  .*****.***************

9. spacer 7.21|1602491|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP009405 (Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence) position: , mismatch: 5, identity: 0.848

gcggggtagtaaacgcgcccggtgcgcccctcc	CRISPR spacer
gcggggtcgtaaacgcgcacggtgcgccggccc	Protospacer
******* ********** *********  .**

10. spacer 7.31|1603101|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 5, identity: 0.848

atcaacgcccgccagttcttccagacgctcaga	CRISPR spacer
atcaacgcccgcgagttcttccagaccctcgcc	Protospacer
************ ************* ***.

11. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN586025 (Mycobacterium phage Mdavu, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

12. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to KT281789 (Mycobacterium phage Enkosi, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

13. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MH020245 (Mycobacterium phage SgtBeansprout, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

14. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to KX808132 (Mycobacterium phage Amelie, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

15. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MH399770 (Mycobacterium phage Biglebops, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

16. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MF919518 (Mycobacterium phage LilPharaoh, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtacttc	Protospacer
*. *************.* ***********  *

17. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MK524485 (Mycobacterium phage MissDaisy, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtagcgc	Protospacer
*. *************.* **********  **

18. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MH926058 (Mycobacterium phage Reptar3000, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtagcgc	Protospacer
*. *************.* **********  **

19. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MK524488 (Mycobacterium phage Patt, complete genome) position: , mismatch: 6, identity: 0.818

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtagcgc	Protospacer
*. *************.* **********  **

20. spacer 7.5|1601515|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.788

--agccgaacccgaaccgggcggaccagtccagaa	CRISPR spacer
gcggcc--ccccgaaccgggcggaccaagccagga	Protospacer
  .***   ******************. ****.*

21. spacer 7.14|1602064|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 7, identity: 0.788

cacatgggccgtcccgacctcacccccgacctg	CRISPR spacer
cacatgggccgtcccgacgtgacccaggggccg	Protospacer
****************** * ****  *. *.*

22. spacer 7.14|1602064|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 7, identity: 0.788

cacatgggccgtcccgacctcacccccgacctg	CRISPR spacer
cacatgggccgtcccgacgtgacccaggggccg	Protospacer
****************** * ****  *. *.*

23. spacer 7.24|1602674|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 7, identity: 0.788

tcttcctcgacctgttcgggtgtc----cagtccggg	CRISPR spacer
tcgtcctcgaccggttcgggtgtcgcaacagcc----	Protospacer
** ********* ***********    ***.*

24. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN234174 (Mycobacterium phage Efra2, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

25. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN234165 (Mycobacterium phage Yunkel11, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

26. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MF140416 (Mycobacterium phage LastHope, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

27. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MG962371 (Mycobacterium phage LaterM, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

28. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN234226 (Mycobacterium phage Curiosium, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

29. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_014459 (Mycobacterium virus CrimD, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

30. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to KM677211 (Mycobacterium phage Murucutumbu, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

31. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN234201 (Mycobacterium phage Guanica15, complete genome) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gacttctcggcggccacggtgccgatgtactta	Protospacer
*. *************.* ***********

32. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

33. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

34. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

35. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

36. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

37. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

38. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

39. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

40. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

41. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

42. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttc	Protospacer
* * ***********.*** *********   *

43. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.788

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
gtgatcgtgcccgcgaccgtcaccggccccgac	Protospacer
 **************** .*******  **  *

44. spacer 7.40|1603650|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

ctggtggctgccgcggtcgccgcgtgggcgggg	CRISPR spacer
gtggtggctgccgccgtccccgcgtgggtcgct	Protospacer
 ************* *** *********. *

45. spacer 7.9|1601759|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

aagcccatgcgtctcaccggggcccactgtagg	CRISPR spacer
cagcccaagcgtctcaccgggggccacgtcgag	Protospacer
 ****** ************** ****  ...*

46. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP019938 (Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
cccaccacaatcgcggtgccgtgctggtcgtca	Protospacer
  *********************** ** . ..

47. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
ccgaccacaatcgcggtgccgtgctggtcgtcg	Protospacer
   ********************** ** . .*

48. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.758

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
ccgaccacaatggcggtgccgtgctggtcatcg	Protospacer
   ******** ************* ** * .*

49. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.758

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
ccgaccacaatggcggtgccgtgctggtcatcg	Protospacer
   ******** ************* ** * .*

50. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 8, identity: 0.758

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
ccgaccacaatggcggtgccgtgctggtcatcg	Protospacer
   ******** ************* ** * .*

51. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttg	Protospacer
* * ***********.*** *********

52. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
gcgatctcggcggccgtgtggccgatgtagttg	Protospacer
* * ***********.*** *********

53. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
cgcagcttgcccgcgacgatcacccgggcgcct	Protospacer
.  * * ***************** **** **.

54. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to JX403939 (Pseudomonas phage YMC/01/01/P52_PAE_BP, complete genome) position: , mismatch: 8, identity: 0.758

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
ttgagcgtgccggcgacgatcaccgagtcgatt	Protospacer
**** ****** *************.* *  ..

55. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to KU310943 (Pseudomonas phage YMC11/07/P54_PAE_BP, complete genome) position: , mismatch: 8, identity: 0.758

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
ttgagcgtgccggcgacgatcaccgagtcgatt	Protospacer
**** ****** *************.* *  ..

56. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044550 (Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence) position: , mismatch: 8, identity: 0.758

ttgat--cgtgcccgcgacgatcaccggggccccc	CRISPR spacer
--ggtcacgtgcgcccgacgatcaccggggcatac	Protospacer
  *.*  ***** * **************** . *

57. spacer 7.51|1604321|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 8, identity: 0.758

---acaagctcaaacgacaggccacgcgccgttttc	CRISPR spacer
ctatcgag---gaaggacaggccgcgcgccgttttc	Protospacer
    *.**   .** ********.************

58. spacer 7.51|1604321|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 8, identity: 0.758

---acaagctcaaacgacaggccacgcgccgttttc	CRISPR spacer
ctatcgag---gaaggacaggccgcgcgccgttttc	Protospacer
    *.**   .** ********.************

59. spacer 7.51|1604321|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 8, identity: 0.758

---acaagctcaaacgacaggccacgcgccgttttc	CRISPR spacer
ctatcgag---gaaggacaggccgcgcgccgttttc	Protospacer
    *.**   .** ********.************

60. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
tactggaccagctccagcagctcgttgcggaac	Protospacer
.  ****.*************** **** * *

61. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014061 (Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
acttcgatcagctccagcggcaccttgccgggg	Protospacer
 . * *************.** ******** .*

62. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
cgcttgcgcagctccaccagctccttggcgtat	Protospacer
*  * *  ******** ********** ****

63. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010864 (Marinovum algicola DG 898 plasmid pMaD9, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
ccctggatccgctccagcagccccttggattcg	Protospacer
*. ****** ***********.*****   * *

64. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
cgcttgcgcagctccaccagctccttggcgtat	Protospacer
*  * *  ******** ********** ****

65. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
cgcttgcgcagctccaccagctccttggcgtat	Protospacer
*  * *  ******** ********** ****

66. spacer 7.5|1601515|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.727

agccgaacccgaaccgggcggaccagtccagaa	CRISPR spacer
acccgaacctgaaccgggcggacgagcgcgtcg	Protospacer
* *******.************* **. *.  .

67. spacer 7.5|1601515|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.727

agccgaacccgaaccgggcggaccagtccagaa	CRISPR spacer
acccgaacctgaaccgggcggacgagcgcgtcg	Protospacer
* *******.************* **. *.  .

68. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
agcggcacgagcgcggtgccgtgcttgtgacac	Protospacer
..*. ***.* *******************

69. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.727

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
tgcgcttcggcggccatgttgttgatgtaccgt	Protospacer
 *  ..***************..******* *.

70. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023519 (Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
aggatcgtgccggcggcgatcaccggcccatgc	Protospacer
  ********* ***.**********  * . *

71. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007745 (Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
aggatcgtgccggcggcgatcaccggcccatgc	Protospacer
  ********* ***.**********  * . *

72. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
gacacggtgaccgcgacgatcaccgtggcctcg	Protospacer
   *. *** *************** ****.*

73. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022081 (Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
aggatcgtgccggcggcgatcaccggcccatgc	Protospacer
  ********* ***.**********  * . *

74. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
acgatcatgcccgccacgatcaccggactcgtc	Protospacer
 .****.******* ***********. .* .*

75. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
aggatcgtgccggcggcgatcaccggcccatgc	Protospacer
  ********* ***.**********  * . *

76. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_009956 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
gcgaacgtgcccgcggcgatcaccggcatcggc	Protospacer
 .** **********.********** ..*  *

77. spacer 7.34|1603284|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034556 (Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatcgtgcccgcgacgatcaccggggccccc	CRISPR spacer
aggatcgtgccggcggcgatcaccggcccatgc	Protospacer
  ********* ***.**********  * . *

78. spacer 7.40|1603650|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN062714 (Microbacterium Phage DirtyBubble, complete genome) position: , mismatch: 9, identity: 0.727

ctggtggctgccgcggtcgccgcgtgggcgggg	CRISPR spacer
gaggcggctgccgaggtcgccgcgtggggcctc	Protospacer
  **.******** **************

79. spacer 7.44|1603894|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MW091528 (Bacteriophage sp. 438212, partial genome) position: , mismatch: 9, identity: 0.727

gggctgtcgatcgcccgcctgggcttggtggtg	CRISPR spacer
ccgcgcgacatcgcccgcctgggcctgatggtg	Protospacer
  **     ***************.**.*****

80. spacer 7.44|1603894|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MK494105 (Mycobacterium phage Pinnie, complete genome) position: , mismatch: 9, identity: 0.727

gggctgtcgatcgcccgcctgggcttggtggtg	CRISPR spacer
gggctgtcgatcgcgctcctgggcgccagcgtc	Protospacer
************** * ******* . .  **

81. spacer 7.48|1604138|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcagggctggcacttggcgcgtcgcgcccggg	CRISPR spacer
cggctggctggcacttggcacgccgcgccgctg	Protospacer
 *   **************.**.******   *

82. spacer 7.48|1604138|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN694444 (Marine virus AFVG_250M1049, complete genome) position: , mismatch: 9, identity: 0.727

ggcagggctggcacttggcgcgtcgcgcccggg	CRISPR spacer
tgcagggctggcactggccgcgtcgagacaatc	Protospacer
 ************** * ******* * * .

83. spacer 7.48|1604138|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN694506 (Marine virus AFVG_250M1048, complete genome) position: , mismatch: 9, identity: 0.727

ggcagggctggcacttggcgcgtcgcgcccggg	CRISPR spacer
tgcagggctggcactggccgcgtcgagacaatc	Protospacer
 ************** * ******* * * .

84. spacer 7.50|1604260|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009886 (Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete sequence) position: , mismatch: 9, identity: 0.727

tgctcggacgcggcgacctgacgctccaggctc	CRISPR spacer
cgtggcgatgcggcgacctgacgctcgaggtta	Protospacer
.*.   **.***************** ***.*

85. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 9, identity: 0.727

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
tgcgggatcagcttcagcagctccttggcgacc	Protospacer
.   *********.************* **

86. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.727

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
ttgcggatctgctccagcagctcctcggactcc	Protospacer
.**.***** ***************.*   *

87. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 9, identity: 0.727

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
ttgcggatctgctccagcagctcctcggattcc	Protospacer
.**.***** ***************.*   *

88. spacer 7.62|1604992|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to MN698239 (Pelagibacter phage HTVC023P, complete genome) position: , mismatch: 9, identity: 0.727

ctgtggatcagctccagcagctccttgccgtag	CRISPR spacer
ttgaggatcagctccaccagctcctccacctcc	Protospacer
.** ************ ********.  * *

89. spacer 7.1|1601271|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.697

tcggggctgtggctgctgtcggtaacgcaggcg	CRISPR spacer
ggctggctggggctgctgtcggaaacgccaccc	Protospacer
    ***** ************ ***** . *

90. spacer 7.18|1602308|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 10, identity: 0.697

gacaccacaatcgcggtgccgtgcttgtgagtg	CRISPR spacer
cggaccgcaatcgaggtgccgtgcttgccgtag	Protospacer
 . ***.****** *************. .  *

91. spacer 7.28|1602918|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 10, identity: 0.697

gggttctcggcggccatgttgccgatgtacagc	CRISPR spacer
ttgttctcggcggccaggtcgccgatccgcgcg	Protospacer
  ************** **.****** ..*.

92. spacer 7.31|1603101|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to CP008939 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence) position: , mismatch: 10, identity: 0.697

atcaacgcccgccagttcttccagacgctcaga	CRISPR spacer
gtcaacgcccgccagcttttccagaaaattgtg	Protospacer
.**************.*.******* . *.. .

93. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013073 (Sphingobium indicum B90A plasmid pSRL3, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

94. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005190 (Sphingobium sp. MI1205 plasmid pMI1, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

95. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005191 (Sphingobium sp. MI1205 plasmid pMI2, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

96. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005193 (Sphingobium sp. MI1205 plasmid pMI4, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

97. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP005090 (Sphingobium sp. TKS plasmid pTK6, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

98. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_013970 (Sphingomonas sp. MM-1 plasmid pISP3 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

99. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_020544 (Sphingomonas sp. MM-1 plasmid pISP3, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

100. spacer 7.37|1603467|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_014007 (Sphingobium japonicum UT26S plasmid pCHQ1, complete sequence) position: , mismatch: 10, identity: 0.697

gcggttatggctggcggtgggctgctgaagtgg	CRISPR spacer
cagcccatggctggcggtgggctgcggtaggtc	Protospacer
  * ..******************* * **

101. spacer 7.40|1603650|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.697

ctggtggctgccgcggtcgccgcgtgggcgggg	CRISPR spacer
tccgtggccgccgcggtggccgcgtggcggacc	Protospacer
.. *****.******** *********  *.

102. spacer 7.57|1604687|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 10, identity: 0.697

attaggcccgccttcatttccggtaacgccgcc	CRISPR spacer
gcgaccgccgccttgatttccggaaacgccgat	Protospacer
.. *   ******* ******** ******* .

103. spacer 7.59|1604809|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 10, identity: 0.697

gtgtcgtctgtggtggtgcctgagcctggctac	CRISPR spacer
gccgggtctgtggtggtgcctggggctggggtg	Protospacer
*.   *****************.* ****

104. spacer 7.63|1605053|34|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NC_048097 (Arthrobacter phage Yang, complete genome) position: , mismatch: 10, identity: 0.706

ttcccccaagtcgcccttcggcgcctcagggagc	CRISPR spacer
cggccccaagtcgcccgacggcgcctcctgggcg	Protospacer
.  *************  *********  **.

105. spacer 7.15|1602125|33|NZ_LT906481|CRISPRCasFinder,CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 11, identity: 0.667

tctactgcgattcagtgggcgtgggagaacgtg	CRISPR spacer
gtcgtaccgctgcagtgggcgtgggagaacggc	Protospacer
 ....  ** * *******************

106. spacer 7.24|1602674|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM017071 (Sphingomonas sp. JE1 plasmid pJE1, complete sequence) position: , mismatch: 11, identity: 0.667

tcttcctcgacctgttcgggtgtccagtccggg	CRISPR spacer
aaggcctcggcctgttcgggggtccagttgtcc	Protospacer
    *****.********** *******.

107. spacer 7.31|1603101|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to KU682439 (Stenotrophomonas phage vB_SmaS-DLP_6, complete genome) position: , mismatch: 11, identity: 0.667

atcaacgcccgccagttcttccagacgctcaga	CRISPR spacer
gatctcgcccgcgagttcttccagtcgcttcag	Protospacer
. .  ******* *********** ****. ..

108. spacer 7.31|1603101|33|NZ_LT906481|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048424 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.667

atcaacgcccgccagttcttccagacgctcaga	CRISPR spacer
gccaatgcccgcgagttcttccagaccgatgtc	Protospacer
..***.****** *************   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

940116 : 998459

Corynebacterium_phage(22.22%)

protease,portal,capsid,integrase

attL 963927:963967|attR 998599:998639

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012360626.1\|940116_941391_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-134	57.8
WP_012360627.1\|941559_942180_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.2e-38	45.5
WP_012360628.1\|942183_942780_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.0e-42	49.7
WP_041628496.1\|943005_944568_-	trigger factor	NA	NA	NA	NA
WP_012360630.1\|945289_945763_-	ribose-5-phosphate isomerase	NA	NA	NA	NA
WP_012360631.1\|945768_946473_-	DSBA oxidoreductase	NA	NA	NA	NA
WP_012360632.1\|946561_949228_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.3e-41	27.0
WP_081601246.1\|949404_949815_+	globin	NA	NA	NA	NA
WP_012360634.1\|949811_950627_-	hypothetical protein	NA	NA	NA	NA
WP_012360635.1\|950637_950829_-	RtcB family protein	G8I4I6	Mycobacterium_phage	3.1e-17	74.6
WP_012360636.1\|950899_951925_-	LLM class oxidoreductase	NA	NA	NA	NA
WP_012360637.1\|951982_953653_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	3.3e-46	26.8
WP_012360638.1\|953871_954525_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_012360639.1\|954718_957019_-	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_012360640.1\|957367_958213_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_012360641.1\|958243_958873_+	oligoribonuclease	M4M9I5	Vibrio_phage	7.8e-25	38.8
WP_012360644.1\|960709_960976_+	PLDc N-terminal domain-containing protein	NA	NA	NA	NA
WP_012360645.1\|960972_961182_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_012360646.1\|961285_962317_+	squalene/phytoene synthase family protein	NA	NA	NA	NA
WP_012360647.1\|962326_963550_-	L,D-transpeptidase family protein	NA	NA	NA	NA
963927:963967	attL	NA	NA	NA	NA
WP_012360649.1\|964351_964570_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012360650.1\|964566_965013_+	hypothetical protein	NA	NA	NA	NA
WP_012360651.1\|964999_965422_+	hypothetical protein	NA	NA	NA	NA
WP_095075326.1\|965445_965829_+	hypothetical protein	NA	NA	NA	NA
WP_012360653.1\|965825_966275_+	hypothetical protein	NA	NA	NA	NA
WP_012360654.1\|966274_966580_+	hypothetical protein	NA	NA	NA	NA
WP_012360655.1\|966576_966840_+	hypothetical protein	NA	NA	NA	NA
WP_012360657.1\|967451_968399_+	HNH endonuclease	A0A1W6JRD2	Corynebacterium_phage	1.6e-69	52.8
WP_148264200.1\|968860_969391_+	hypothetical protein	NA	NA	NA	NA
WP_157727788.1\|970272_970434_+	hypothetical protein	NA	NA	NA	NA
WP_041628498.1\|970914_971316_+	bifunctional DNA primase/polymerase	A0A220NQN1	Corynebacterium_phage	8.1e-36	58.0
WP_041628499.1\|971391_971634_+	hypothetical protein	NA	NA	NA	NA
WP_012360660.1\|971596_973039_+	hypothetical protein	A0A0S1S2I3	Propionibacterium_phage	7.4e-79	39.5
WP_012360661.1\|973035_974439_+\|portal	phage portal protein	S5XYN1	Mycobacterium_phage	4.8e-91	41.7
WP_012360662.1\|974413_975688_+	EndoU domain-containing protein	A0A2H4PEX4	Gordonia_phage	1.9e-06	39.1
WP_148264202.1\|975693_975975_+	hypothetical protein	NA	NA	NA	NA
WP_012360664.1\|976161_976698_+	hypothetical protein	NA	NA	NA	NA
WP_012360665.1\|976749_977658_+\|capsid	phage major capsid protein	A0A142KBU3	Gordonia_phage	1.3e-89	55.7
WP_041628500.1\|977671_977857_+	hypothetical protein	NA	NA	NA	NA
WP_012360666.1\|977878_978349_+	hypothetical protein	A0A2H4IYA5	uncultured_Caudovirales_phage	2.0e-33	53.7
WP_012360668.1\|978705_978888_+	hypothetical protein	NA	NA	NA	NA
WP_012360669.1\|978887_979127_+	hypothetical protein	NA	NA	NA	NA
WP_012360670.1\|979195_979495_+	hypothetical protein	NA	NA	NA	NA
WP_041628503.1\|979568_980234_+	hypothetical protein	NA	NA	NA	NA
WP_012360672.1\|980306_980585_+	hypothetical protein	NA	NA	NA	NA
WP_012360673.1\|980653_981001_+	hypothetical protein	NA	NA	NA	NA
WP_012360674.1\|981031_987337_+	tape measure protein	A0A1W6JQH4	Corynebacterium_phage	5.7e-75	32.3
WP_012360675.1\|987361_988138_+	hypothetical protein	NA	NA	NA	NA
WP_012360676.1\|988161_989043_+	immunity-specific protein	A0A1L6BZG4	Pasteurella_phage	3.6e-12	25.0
WP_012360677.1\|989049_990390_+	hypothetical protein	NA	NA	NA	NA
WP_012360678.1\|990389_991568_+	hypothetical protein	NA	NA	NA	NA
WP_012360679.1\|991572_992934_+	hypothetical protein	NA	NA	NA	NA
WP_012360680.1\|993172_993325_-	hypothetical protein	NA	NA	NA	NA
WP_012360683.1\|995045_995507_+	hypothetical protein	A0A220NQQ7	Corynebacterium_phage	1.6e-27	45.6
WP_012360684.1\|995496_995844_+	hypothetical protein	NA	NA	NA	NA
WP_012360685.1\|995902_996760_-	hypothetical protein	NA	NA	NA	NA
WP_012360686.1\|996762_997569_-	hypothetical protein	NA	NA	NA	NA
WP_012360687.1\|997661_998459_-\|integrase	tyrosine-type recombinase/integrase	A0A2P1CCU8	Gordonia_phage	2.5e-52	47.4
998599:998639	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1011888 : 1054771

Bacillus_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148264203.1\|1011888_1013123_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.8e-60	43.3
WP_141759501.1\|1013324_1013657_-	hypothetical protein	NA	NA	NA	NA
WP_012360704.1\|1014006_1015524_-	hypothetical protein	A0A1I9SA50	Rhodococcus_phage	3.6e-36	37.9
WP_012360705.1\|1015740_1017090_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.6
WP_148264203.1\|1018178_1019413_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.8e-60	43.3
WP_012360708.1\|1019883_1020327_+	hypothetical protein	NA	NA	NA	NA
WP_012360709.1\|1020381_1020762_+	DUF3817 domain-containing protein	NA	NA	NA	NA
WP_012360710.1\|1020790_1022146_-	amidohydrolase	NA	NA	NA	NA
WP_012360711.1\|1022228_1022867_-	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_012360712.1\|1022901_1023675_-	ribonuclease PH	NA	NA	NA	NA
WP_012360713.1\|1023696_1024491_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_012360714.1\|1024658_1025525_-	glutamate racemase	NA	NA	NA	NA
WP_012360715.1\|1025634_1026219_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_012360716.1\|1026287_1027484_-	P1 family peptidase	NA	NA	NA	NA
WP_012360717.1\|1027458_1028208_-	DUF2017 domain-containing protein	NA	NA	NA	NA
WP_012360718.1\|1028177_1028594_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_050816668.1\|1028685_1030023_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_012360720.1\|1030104_1032108_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	3.5e-63	28.5
WP_012360721.1\|1032257_1033829_+	AMP-binding protein	Q75ZG1	Hepacivirus	6.6e-57	31.2
WP_012360722.1\|1033908_1034706_-	hypothetical protein	NA	NA	NA	NA
WP_012360723.1\|1034774_1036163_-	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_012360724.1\|1036261_1037959_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_012360725.1\|1038265_1039261_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	4.1e-137	75.3
WP_041628508.1\|1039510_1040002_+	ferritin	NA	NA	NA	NA
WP_012360727.1\|1040131_1042291_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	9.9e-213	52.4
WP_012360728.1\|1042381_1042816_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	2.5e-14	41.4
WP_012360729.1\|1042823_1044158_-	MFS transporter	NA	NA	NA	NA
WP_012360730.1\|1044484_1044715_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.5e-18	60.5
WP_005288826.1\|1045080_1045203_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_012360731.1\|1045384_1046218_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	3.3e-79	54.7
WP_012360732.1\|1046214_1046604_-	DUF393 domain-containing protein	NA	NA	NA	NA
WP_012360733.1\|1046630_1047275_-	vitamin K epoxide reductase family protein	NA	NA	NA	NA
WP_012360734.1\|1047515_1049873_+	MMPL family transporter	NA	NA	NA	NA
WP_012360735.1\|1049964_1050465_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_169847092.1\|1050727_1051918_+\|transposase	IS256-like element ISCur3 family transposase	NA	NA	NA	NA
WP_081477615.1\|1052032_1053412_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.5e-39	34.9
WP_012360738.1\|1053592_1054771_+\|transposase	IS256-like element ISCur2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1098842 : 1109793

Escherichia_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011116984.1\|1098842_1101728_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.2e-190	39.9
WP_012360777.1\|1101853_1102261_+	recombinase family protein	A0A0C4UR34	Shigella_phage	2.4e-19	57.9
WP_001067855.1\|1102206_1102911_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018326.1\|1103061_1103877_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.5
WP_001067855.1\|1104033_1104738_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001082319.1\|1105177_1105981_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|1105980_1106817_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_005297378.1\|1107020_1108196_-	chloramphenicol efflux MFS transporter Cmx	NA	NA	NA	NA
WP_011113070.1\|1108217_1108271_-	chloramphenicol resistance leader peptide	NA	NA	NA	NA
WP_012360779.1\|1108449_1109793_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.0e-31	35.6

DBSCAN-SWA_4

1181507 : 1300349

108

Bacillus_phage(12.5%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012360833.1\|1181507_1182857_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.6
WP_041628514.1\|1182950_1183859_+\|transposase	IS1249 family transposase	NA	NA	NA	NA
WP_012360835.1\|1183924_1185304_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.5e-39	34.9
WP_041628515.1\|1185798_1186212_-	hypothetical protein	NA	NA	NA	NA
WP_158307922.1\|1186406_1187540_-	hypothetical protein	NA	NA	NA	NA
WP_012360838.1\|1187436_1187790_-	hypothetical protein	NA	NA	NA	NA
WP_012360840.1\|1188972_1189485_+	hypothetical protein	NA	NA	NA	NA
WP_012360841.1\|1189794_1191300_-	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_148264206.1\|1191535_1192714_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_012360843.1\|1192788_1193346_-	gluconokinase	NA	NA	NA	NA
WP_012360844.1\|1193404_1194556_-	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA
WP_012360845.1\|1194608_1195628_-	mycothiol synthase	NA	NA	NA	NA
WP_012360846.1\|1195740_1196637_+	DUF2993 domain-containing protein	NA	NA	NA	NA
WP_012360847.1\|1196647_1197394_+	FABP family protein	NA	NA	NA	NA
WP_041628516.1\|1197406_1198297_-	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_012360849.1\|1198483_1199659_+	folate-binding protein YgfZ	NA	NA	NA	NA
WP_012360850.1\|1199876_1200050_+	DUF3073 domain-containing protein	NA	NA	NA	NA
WP_012360851.1\|1200289_1201468_+\|transposase	IS256-like element ISCur2 family transposase	NA	NA	NA	NA
WP_012360852.1\|1201611_1202679_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FK46	Synechococcus_phage	2.2e-59	40.6
WP_012360853.1\|1202729_1204340_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.7e-47	31.0
WP_043951934.1\|1204355_1204790_-	hypothetical protein	NA	NA	NA	NA
WP_012360854.1\|1204946_1206011_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_012360855.1\|1206060_1207371_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_012360856.1\|1207441_1208101_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_012360857.1\|1208140_1210603_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.9e-234	55.7
WP_012360858.1\|1210661_1211330_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_012360859.1\|1211326_1211572_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_012360860.1\|1211730_1213947_-	S9 family peptidase	NA	NA	NA	NA
WP_012360861.1\|1214328_1215144_+	hypothetical protein	NA	NA	NA	NA
WP_012360862.1\|1215356_1216250_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	2.0e-42	37.9
WP_012360863.1\|1216317_1217535_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_012360864.1\|1217580_1218000_-	NfeD family protein	NA	NA	NA	NA
WP_012360865.1\|1218048_1219491_-	adenylosuccinate lyase	NA	NA	NA	NA
WP_012360866.1\|1219546_1220449_-	Fpg/Nei family DNA glycosylase	NA	NA	NA	NA
WP_041628517.1\|1220467_1221745_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_012360868.1\|1221810_1222275_+	HIT family protein	NA	NA	NA	NA
WP_012360869.1\|1222297_1223161_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_012360870.1\|1223099_1224689_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.1e-22	28.3
WP_012360871.1\|1224701_1225472_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.1e-31	34.2
WP_012360872.1\|1225692_1226499_+	L,D-transpeptidase	NA	NA	NA	NA
WP_012360873.1\|1226599_1227130_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012360874.1\|1227160_1228924_-	alkaline phosphatase D family protein	NA	NA	NA	NA
WP_012360875.1\|1228923_1229349_-	hypothetical protein	NA	NA	NA	NA
WP_157727790.1\|1229329_1229470_+	plantazolicin family RiPP	NA	NA	NA	NA
WP_012360876.1\|1229577_1230174_+	hypothetical protein	NA	NA	NA	NA
WP_012360877.1\|1230175_1230883_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012360878.1\|1230885_1231587_+	hypothetical protein	NA	NA	NA	NA
WP_012360879.1\|1231593_1232565_+	TOMM precursor leader peptide-binding protein	NA	NA	NA	NA
WP_012360880.1\|1232566_1233961_+	YcaO-like family protein	NA	NA	NA	NA
WP_012360881.1\|1233972_1234806_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_012360882.1\|1234802_1235381_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_095075328.1\|1236845_1237058_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_012360886.1\|1237080_1238430_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.2e-36	37.6
WP_081477620.1\|1238366_1238969_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.4e-17	30.7
WP_095075329.1\|1240117_1241345_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.7e-64	50.9
WP_041628620.1\|1241643_1242834_+\|transposase	IS1249 family transposase	NA	NA	NA	NA
WP_012360892.1\|1243076_1244804_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_012360893.1\|1244892_1245294_+	hypothetical protein	NA	NA	NA	NA
WP_012360894.1\|1245348_1246908_+	trehalose-6-phosphate synthase	NA	NA	NA	NA
WP_012360895.1\|1246907_1247420_+	hypothetical protein	NA	NA	NA	NA
WP_012360896.1\|1247483_1248437_+	trehalose-phosphatase	NA	NA	NA	NA
WP_012360897.1\|1248526_1249657_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_012360898.1\|1249763_1250804_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012360899.1\|1250800_1251502_+	metal ABC transporter ATP-binding protein	A0A1V0SGN0	Hokovirus	1.1e-11	29.6
WP_012360900.1\|1251498_1252506_+	metal ABC transporter permease	NA	NA	NA	NA
WP_012360901.1\|1252591_1253545_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_012360902.1\|1253639_1254230_-	thiamine biosynthesis protein X	NA	NA	NA	NA
WP_012360903.1\|1254329_1255379_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012360904.1\|1255368_1256556_+	iron ABC transporter permease	NA	NA	NA	NA
WP_012360905.1\|1256555_1257332_+	heme ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.3e-16	31.0
WP_012360906.1\|1257354_1258026_+	biliverdin-producing heme oxygenase	Q58M64	Prochlorococcus_phage	2.0e-31	38.6
WP_012360907.1\|1258080_1259544_-\|tRNA	cysteine--tRNA ligase	A0A2K9L4N2	Tupanvirus	8.6e-43	32.7
WP_012360908.1\|1259742_1260573_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_012360909.1\|1260691_1260976_+	hypothetical protein	NA	NA	NA	NA
WP_012360910.1\|1260944_1261433_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_012360911.1\|1261478_1262276_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_012360912.1\|1262338_1262911_-	CarD family transcriptional regulator	NA	NA	NA	NA
WP_012360913.1\|1263233_1263806_+	hypothetical protein	NA	NA	NA	NA
WP_012360914.1\|1263941_1265342_+	DNA repair protein RadA	NA	NA	NA	NA
WP_012360915.1\|1265345_1266113_-	hypothetical protein	NA	NA	NA	NA
WP_012360916.1\|1266262_1267090_-	carbonic anhydrase	NA	NA	NA	NA
WP_012360917.1\|1267164_1268148_+	DNA glycosylase	NA	NA	NA	NA
WP_012360918.1\|1268337_1269729_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_012360919.1\|1269813_1271187_+	hypothetical protein	NA	NA	NA	NA
WP_012360920.1\|1271415_1274100_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2C9CXH0	Yersinia_phage	2.0e-130	39.8
WP_012360921.1\|1274500_1276276_+	bile acid CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.0e-30	25.0
WP_012360922.1\|1276419_1278027_-	inorganic phosphate transporter	V5LQA0	Emiliania_huxleyi_virus	1.2e-37	28.6
WP_012360923.1\|1278265_1279471_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_012360924.1\|1279536_1280937_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_012360925.1\|1281129_1282677_-\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	7.9e-71	33.4
WP_012360926.1\|1282863_1284072_-	hemoglobin flavoprotein	NA	NA	NA	NA
WP_012360927.1\|1284109_1284604_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_012360928.1\|1284747_1285167_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_012360929.1\|1285186_1286179_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_012360930.1\|1286184_1287132_-	DUF2520 domain-containing protein	NA	NA	NA	NA
WP_012360931.1\|1287179_1288397_-	hypothetical protein	NA	NA	NA	NA
WP_012360932.1\|1288423_1288900_-	DUF3180 domain-containing protein	NA	NA	NA	NA
WP_012360933.1\|1288910_1289579_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_012360934.1\|1289583_1289961_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_012360935.1\|1289953_1290907_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	6.9e-25	34.2
WP_012360936.1\|1290979_1291594_-	GTP cyclohydrolase I FolE	A0A1W7AF02	Streptococcus_virus	8.3e-48	56.0
WP_012360937.1\|1291614_1294128_-\|protease	ATP-dependent zinc metalloprotease FtsH	G8DDJ2	Micromonas_pusilla_virus	3.8e-107	49.4
WP_012360938.1\|1294206_1294809_-	hypoxanthine phosphoribosyltransferase	A0A2K9L634	Tupanvirus	1.6e-11	26.1
WP_095075342.1\|1294801_1295962_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_012360940.1\|1296114_1297491_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_012360941.1\|1297634_1298117_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	8.6e-32	47.0
WP_012360942.1\|1298365_1299070_+	hypothetical protein	NA	NA	NA	NA
WP_012360943.1\|1299170_1300349_+\|transposase	IS256-like element ISCur2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1481104 : 1600338

Staphylococcus_phage(21.43%)

tRNA,protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012361095.1\|1481104_1481623_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_012361096.1\|1481711_1482581_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_012361097.1\|1482623_1483817_-\|protease	MarP family serine protease	NA	NA	NA	NA
WP_012361098.1\|1483828_1484641_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_095075343.1\|1484645_1485290_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_012361101.1\|1485498_1486368_-	endonuclease III	NA	NA	NA	NA
WP_012361100.1\|1486354_1487038_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_041628534.1\|1487214_1488078_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_012361103.1\|1488112_1488601_-	RidA family protein	M1I5B0	Acanthocystis_turfacea_Chlorella_virus	6.2e-14	34.4
WP_095075344.1\|1488603_1488759_-	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_158307924.1\|1488943_1489264_-	WhiB family transcriptional regulator	A0A159B6S6	Tsukamurella_phage	4.7e-10	47.8
WP_012361106.1\|1489851_1492032_+	penicillin-binding protein	NA	NA	NA	NA
WP_141759404.1\|1492135_1493209_+	metallophosphoesterase family protein	NA	NA	NA	NA
WP_169847096.1\|1493505_1494537_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-38	34.6
WP_012361109.1\|1495202_1496381_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_012361110.1\|1497014_1500386_+	DUF4040 family protein	NA	NA	NA	NA
WP_012361111.1\|1500382_1500898_+	cation:proton antiporter subunit C	NA	NA	NA	NA
WP_012361112.1\|1500897_1502664_+	monovalent cation/H+ antiporter subunit D family protein	NA	NA	NA	NA
WP_012361113.1\|1502663_1503377_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_012361114.1\|1503377_1503656_+	cation:proton antiporter	NA	NA	NA	NA
WP_012361115.1\|1503659_1504082_+	Na+/H+ antiporter subunit G	NA	NA	NA	NA
WP_012361116.1\|1504172_1504598_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_012361117.1\|1504649_1506266_-	catalase	A0A2K9L572	Tupanvirus	1.2e-88	40.9
WP_012361118.1\|1506494_1507157_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_012361119.1\|1507203_1508688_+	TIGR01777 family protein	NA	NA	NA	NA
WP_012361120.1\|1508691_1509957_+	ferrochelatase	NA	NA	NA	NA
WP_012361121.1\|1510113_1511637_+	ABC transporter permease	NA	NA	NA	NA
WP_012361122.1\|1511862_1512900_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_012361123.1\|1512953_1514219_-	aspartate kinase	NA	NA	NA	NA
WP_012361124.1\|1514384_1515233_+	DMT family transporter	NA	NA	NA	NA
WP_012361125.1\|1515335_1517111_+	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.6e-22	27.8
WP_012361126.1\|1517362_1518799_+	Ig-like domain repeat protein	NA	NA	NA	NA
WP_050816651.1\|1518829_1520272_+	Ig-like domain repeat protein	NA	NA	NA	NA
WP_012361128.1\|1520418_1523661_-	VWA domain-containing protein	NA	NA	NA	NA
WP_012361129.1\|1523666_1524512_-	surface-anchored protein (fimbrial subunit)	NA	NA	NA	NA
WP_012361130.1\|1524504_1525443_-	class C sortase	NA	NA	NA	NA
WP_012361131.1\|1525541_1527023_-	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_012361134.1\|1528977_1530819_+	2-isopropylmalate synthase	NA	NA	NA	NA
WP_157727792.1\|1530993_1531590_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_012361136.1\|1531593_1533006_-	APC family permease	NA	NA	NA	NA
WP_012361137.1\|1532998_1534624_-	acyl--CoA ligase	NA	NA	NA	NA
WP_050816652.1\|1534620_1535088_-	hypothetical protein	NA	NA	NA	NA
WP_012361139.1\|1535244_1537065_+	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_148264220.1\|1537096_1538569_+	DUF1727 domain-containing protein	NA	NA	NA	NA
WP_012361141.1\|1538568_1539675_+	hypothetical protein	NA	NA	NA	NA
WP_012361142.1\|1540249_1542190_-	calcineurin-like phosphoesterase C-terminal domain-containing protein	NA	NA	NA	NA
WP_012361143.1\|1542597_1543623_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	1.6e-48	41.9
WP_012361144.1\|1543969_1544791_-	recombination protein RecR	NA	NA	NA	NA
WP_012361145.1\|1544880_1545198_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_012361146.1\|1545316_1548625_-	DNA polymerase III subunit gamma and tau	A0A1L2BWV7	Bacteriophage	1.0e-46	33.2
WP_012361147.1\|1548680_1549355_-	NINE protein	NA	NA	NA	NA
WP_012361148.1\|1549405_1550086_-	hypothetical protein	NA	NA	NA	NA
WP_012361149.1\|1550118_1551417_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_012361150.1\|1551547_1552897_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.4e-36	37.1
WP_012361151.1\|1553145_1554330_+\|transposase	IS256-like element IS3503 family transposase	NA	NA	NA	NA
WP_012361152.1\|1554551_1555730_+\|transposase	IS1249 family transposase	NA	NA	NA	NA
WP_005323424.1\|1555920_1557099_+\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_148264209.1\|1557650_1557953_-	hypothetical protein	NA	NA	NA	NA
WP_012361151.1\|1558080_1559265_-\|transposase	IS256-like element IS3503 family transposase	NA	NA	NA	NA
WP_012361154.1\|1559419_1560769_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.4e-36	37.1
WP_012361155.1\|1560859_1561045_-	hypothetical protein	NA	NA	NA	NA
WP_012361156.1\|1561177_1562065_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_050816653.1\|1562061_1563120_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_081477624.1\|1563112_1564468_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	8.8e-58	33.9
WP_012361159.1\|1564505_1566911_-	MMPL family transporter	NA	NA	NA	NA
WP_012361160.1\|1567252_1567849_-	nucleoside deaminase	NA	NA	NA	NA
WP_012361161.1\|1567763_1568333_-\|tRNA	tRNA adenosine deaminase-associated protein	NA	NA	NA	NA
WP_012361162.1\|1568425_1569475_+	prephenate dehydrogenase	NA	NA	NA	NA
WP_012361163.1\|1569779_1570757_+	diaminopimelate dehydrogenase	NA	NA	NA	NA
WP_012361165.1\|1571818_1572937_+	pyridoxal phosphate-dependent aminotransferase	A0A1X6WGT4	Pacmanvirus	1.2e-07	25.3
WP_050816673.1\|1573047_1574586_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_012361167.1\|1575038_1575887_+	hypothetical protein	NA	NA	NA	NA
WP_012361168.1\|1575965_1576364_+	membrane protein	NA	NA	NA	NA
WP_012361169.1\|1576476_1579215_+	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_012361170.1\|1579214_1581446_+	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_012361171.1\|1581805_1582873_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_012361172.1\|1583023_1584340_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_012361173.1\|1584725_1585592_+	ABC transporter permease	NA	NA	NA	NA
WP_012361174.1\|1585635_1586430_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.9e-10	23.3
WP_012361175.1\|1586544_1587486_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_012361176.1\|1587874_1589179_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_169847099.1\|1589204_1589588_-	GtrA family protein	NA	NA	NA	NA
WP_012361178.1\|1589785_1590442_-	GtrA family protein	NA	NA	NA	NA
WP_012361179.1\|1590683_1591469_-	hypothetical protein	NA	NA	NA	NA
WP_012361181.1\|1591488_1592178_-	hypothetical protein	NA	NA	NA	NA
WP_012361180.1\|1592176_1592578_+	hypothetical protein	NA	NA	NA	NA
WP_012361182.1\|1592725_1593100_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_012361183.1\|1593254_1594670_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_012361184.1\|1594701_1595460_+	decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase	NA	NA	NA	NA
WP_012361185.1\|1595650_1596556_-	cutinase family protein	NA	NA	NA	NA
WP_012361186.1\|1596808_1597690_-	hypothetical protein	NA	NA	NA	NA
WP_141759414.1\|1597984_1598206_-	hypothetical protein	NA	NA	NA	NA
WP_081477625.1\|1598442_1598892_+	EndoU domain-containing protein	A0A220NQN8	Corynebacterium_phage	6.8e-23	35.7
WP_012361189.1\|1598888_1599128_+	hypothetical protein	NA	NA	NA	NA
WP_169847096.1\|1599306_1600338_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-38	34.6

DBSCAN-SWA_6

1699226 : 1764614

Pandoravirus(15.38%)

integrase,protease,transposase

attL 1699032:1699081|attR 1710865:1710914

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1699032:1699081	attL	NA	NA	NA	NA
WP_081477605.1\|1699226_1700390_+\|integrase	tyrosine-type recombinase/integrase	Q1WDJ5	Streptomyces_phage	1.1e-11	24.3
WP_012359279.1\|1700901_1701906_-	AAA family ATPase	NA	NA	NA	NA
WP_012359280.1\|1701902_1702574_-	hypothetical protein	NA	NA	NA	NA
WP_012359283.1\|1705273_1705756_-	hypothetical protein	NA	NA	NA	NA
WP_012359284.1\|1706172_1707033_-	hypothetical protein	NA	NA	NA	NA
WP_012359285.1\|1707327_1707900_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_012359286.1\|1707917_1709417_-	MFS transporter	NA	NA	NA	NA
WP_012359287.1\|1709688_1710228_+	recombinase family protein	M9Q1K0	Clostridium_phage	1.1e-32	47.2
WP_012359288.1\|1710378_1710702_+	hypothetical protein	NA	NA	NA	NA
WP_081477606.1\|1711046_1712024_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
1710865:1710914	attR	NA	NA	NA	NA
WP_012359290.1\|1712026_1712830_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_012359291.1\|1713042_1713381_+	transglycosylase family protein	A0A1I9SA30	Rhodococcus_phage	1.4e-28	60.6
WP_012359292.1\|1713835_1715020_-\|transposase	IS256-like element IS3503 family transposase	NA	NA	NA	NA
WP_012359293.1\|1715203_1716115_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_012359294.1\|1716238_1717606_+	MFS transporter	NA	NA	NA	NA
WP_012359295.1\|1717631_1718129_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_012359296.1\|1718247_1718595_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012359297.1\|1718675_1719794_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_012359298.1\|1719790_1720210_+	low molecular weight phosphatase family protein	A0A2H4PQT9	Staphylococcus_phage	2.6e-08	31.9
WP_012359300.1\|1722900_1724250_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	9.4e-36	37.1
WP_012359301.1\|1724369_1724717_+	hypothetical protein	Q6NE04	Leptospira_phage	5.8e-14	39.1
WP_012359302.1\|1724918_1726097_+\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_012359303.1\|1726373_1727054_+	Abi family protein	NA	NA	NA	NA
WP_012359307.1\|1728512_1729172_-	hypothetical protein	NA	NA	NA	NA
WP_041628436.1\|1729624_1729918_-	hypothetical protein	NA	NA	NA	NA
WP_012359308.1\|1730066_1730771_-	chlorite dismutase family protein	NA	NA	NA	NA
WP_012359309.1\|1730940_1731423_-	DUF2871 domain-containing protein	NA	NA	NA	NA
WP_012359312.1\|1732916_1734047_+	alanine--glyoxylate aminotransferase family protein	A0A0N9QIZ2	Chrysochromulina_ericina_virus	1.2e-76	41.0
WP_012359313.1\|1734163_1734511_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012359314.1\|1734573_1736646_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	2.5e-56	40.9
WP_012359315.1\|1736654_1738352_-	hypothetical protein	NA	NA	NA	NA
WP_012359316.1\|1738535_1739060_+	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	6.7e-22	43.3
WP_012359317.1\|1739067_1739760_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_012359318.1\|1739804_1740083_-	cell division protein CrgA	NA	NA	NA	NA
WP_012359319.1\|1740227_1740914_+	glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	4.3e-37	42.2
WP_012359320.1\|1740944_1743122_-	Stk1 family PASTA domain-containing Ser/Thr kinase	Q8JE84	Murine_leukemia_virus	2.7e-16	30.5
WP_012359321.1\|1743299_1744943_-	serine/threonine protein kinase	S4W2F5	Pandoravirus	5.4e-17	29.6
WP_012359322.1\|1744945_1746394_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_012359323.1\|1746390_1747776_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_012359324.1\|1747777_1749346_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_012359325.1\|1749342_1749858_-	FHA domain-containing protein	NA	NA	NA	NA
WP_012359326.1\|1750042_1751275_-	DUF3662 domain-containing protein	NA	NA	NA	NA
WP_012359327.1\|1751786_1752413_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012359328.1\|1752455_1754126_-	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	7.1e-09	30.3
WP_015381080.1\|1754122_1755847_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_012359330.1\|1755846_1756812_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_012359331.1\|1756808_1758524_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_012359332.1\|1758759_1759323_+	hypothetical protein	NA	NA	NA	NA
WP_012359333.1\|1759461_1760262_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_012359334.1\|1760338_1761601_+	DUF2029 domain-containing protein	NA	NA	NA	NA
WP_012359335.1\|1761545_1762682_+	DUF1524 domain-containing protein	NA	NA	NA	NA
WP_012359336.1\|1762804_1763797_-	asparaginase	NA	NA	NA	NA
WP_012359337.1\|1763984_1764614_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_7

2301766 : 2321123

Staphylococcus_phage(33.33%)

protease,integrase,transposase

attL 2308661:2308698|attR 2321230:2321267

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169847095.1\|2301766_2303437_-\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_012359763.1\|2303619_2304696_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_041628461.1\|2304731_2305268_-	hypothetical protein	NA	NA	NA	NA
WP_012359765.1\|2305409_2308412_+	UPF0182 family protein	NA	NA	NA	NA
2308661:2308698	attL	NA	NA	NA	NA
WP_095075338.1\|2308814_2309993_-\|transposase	IS1249 family transposase	NA	NA	NA	NA
WP_169847096.1\|2310182_2311214_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-38	34.6
WP_012359880.1\|2311894_2313073_-\|transposase	IS256-like element ISCur2 family transposase	NA	NA	NA	NA
WP_012360835.1\|2313254_2314634_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.5e-39	34.9
WP_012359767.1\|2314952_2315357_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_012359768.1\|2315526_2317086_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.1e-112	50.0
WP_012359769.1\|2317255_2317732_-	hypothetical protein	NA	NA	NA	NA
WP_012359770.1\|2317769_2319380_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_012359771.1\|2319360_2319723_-	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA
WP_041628568.1\|2320592_2321123_+\|integrase	site-specific integrase	NA	NA	NA	NA
2321230:2321267	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT906481

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection