CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT906434	Neisseria zoodegmatis strain NCTC12230 chromosome 1	3 crisprs	cas1,cas4,cas7,cas8c,cas5,cas3,DinG,csa3,WYL,DEDDh	4	17	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT906434_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906434_1

136689-137566

Orphan

Consensus_repeat	Method
GTTTCAACACACAGCCACGCNAGGTGGCTGA	CRT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CRISPRCasFinder
GTTTCAACACACAGCCACGC-CAGGTGGCTGA	PILER-CR

13 spacers

The CRISPR arrays of NZ_LT906434_1

>merge|NZ_LT906434|1|136689-137566|CRT,CRISPRCasFinder,PILER-CR
GTTTAATAACACAATCACGCAAAGGTGGCTGACACTTCCTGCGTTTCGCTGATTCGGTACTTTGTAGTTTCAACGCATAGCCACGCAAGGTGGCTGACTGCGGCAGCGGGGCAAATGTGATTGCTTTTGCCGTTTCAACACACAGCCACGTGAGGTGGCTGACTGCCCGCCCGTTTGCAAGCTACTTTGGCCGCTGGTTTCAACACACAGCCACGCGAGGTGGCTGACAAAGGCTATTCTGCTAAAGTGGTTTCTTTTACTGTTTCAACACACAGCCGCCCGAAGGCGGCTGACGCAAATCAATTTCAGGTTTAAGCTTGTTGTAAAGTTTCAACACACAGCCACGCCAGGTGGCTGATGTCAACGATACTTGGACCGCTTCGGCCAACTTGCGTTTCAACACACAGCCACGCCAGGTGGCTGATAATTTAATCCTGTCTGCCACACGCGATATGTGTGTTTCAACACACAGCCACGCCAGGTGGCTGAAGAAAAGCAAGCCGAATTACTTTATTACTACGGTGTTTCAACACACAGCCACGCCAGGTGGCTGACACCGTTTCAGCGGTTTTGCTTACCCAAAGGCTCGTTTCAACACACAGCCACGCCAGGTGGCTGATTATGCGCCTGCTGATGATTATTTAGACGGGCTGGTTTCAACACACAGCCACGCCAGGTGGCTGATAACGGTGCTGATTTGTTGTGCTTGAGTAGCGTTGTTTCAACACACAGCCACGCCAGGTGGCTGACGACGGGCGAGCGGACGGATATTTGAGCTGTGCGTTTCAACACACAGCCACGCCAGGTGGCTGAGTGGTCGATTACGAGCACCAAACCCTGCACAAAGGTTTCAACACACAGCCACGCCAGGTGGCTGA

>NZ_LT906434|1|1|136689-137566|CRT
GTTTAATAACACAATCACGCAAAGGTGGCTG	ACACTTCCTGCGTTTCGCTGATTCGGTACTTTGTA
GTTTCAACGCATAGCCACGCAAGGTGGCTGA	CTGCGGCAGCGGGGCAAATGTGATTGCTTTTGCC
GTTTCAACACACAGCCACGTGAGGTGGCTGA	CTGCCCGCCCGTTTGCAAGCTACTTTGGCCGCTG
GTTTCAACACACAGCCACGCGAGGTGGCTGA	CAAAGGCTATTCTGCTAAAGTGGTTTCTTTTACT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	ACGCAAATCAATTTCAGGTTTAAGCTTGTTGTAAA
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TGTCAACGATACTTGGACCGCTTCGGCCAACTTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAATTTAATCCTGTCTGCCACACGCGATATGTGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	AGAAAAGCAAGCCGAATTACTTTATTACTACGGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CACCGTTTCAGCGGTTTTGCTTACCCAAAGGCTC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TTATGCGCCTGCTGATGATTATTTAGACGGGCTG
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAACGGTGCTGATTTGTTGTGCTTGAGTAGCGTT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CGACGGGCGAGCGGACGGATATTTGAGCTGTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	GTGGTCGATTACGAGCACCAAACCCTGCACAAAG
GTTTCAACACACAGCCACGCCAGGTGGCTGA

>NZ_LT906434|1|1|136755-137566|CRISPRCasFinder
GTTTCAACGCATAGCCACGCAAGGTGGCTGA	CTGCGGCAGCGGGGCAAATGTGATTGCTTTTGCC
GTTTCAACACACAGCCACGTGAGGTGGCTGA	CTGCCCGCCCGTTTGCAAGCTACTTTGGCCGCTG
GTTTCAACACACAGCCACGCGAGGTGGCTGA	CAAAGGCTATTCTGCTAAAGTGGTTTCTTTTACT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	ACGCAAATCAATTTCAGGTTTAAGCTTGTTGTAAA
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TGTCAACGATACTTGGACCGCTTCGGCCAACTTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAATTTAATCCTGTCTGCCACACGCGATATGTGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	AGAAAAGCAAGCCGAATTACTTTATTACTACGGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CACCGTTTCAGCGGTTTTGCTTACCCAAAGGCTC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TTATGCGCCTGCTGATGATTATTTAGACGGGCTG
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAACGGTGCTGATTTGTTGTGCTTGAGTAGCGTT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CGACGGGCGAGCGGACGGATATTTGAGCTGTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	GTGGTCGATTACGAGCACCAAACCCTGCACAAAG
GTTTCAACACACAGCCACGCCAGGTGGCTGA

>NZ_LT906434|1|1|137016-137566|PILER-CR
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TGTCAACGATACTTGGACCGCTTCGGCCAACTTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAATTTAATCCTGTCTGCCACACGCGATATGTGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	AGAAAAGCAAGCCGAATTACTTTATTACTACGGT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CACCGTTTCAGCGGTTTTGCTTACCCAAAGGCTC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TTATGCGCCTGCTGATGATTATTTAGACGGGCTG
GTTTCAACACACAGCCACGCCAGGTGGCTGA	TAACGGTGCTGATTTGTTGTGCTTGAGTAGCGTT
GTTTCAACACACAGCCACGCCAGGTGGCTGA	CGACGGGCGAGCGGACGGATATTTGAGCTGTGC
GTTTCAACACACAGCCACGCCAGGTGGCTGA	GTGGTCGATTACGAGCACCAAACCCTGCACAAAG
GTTTCAACACACAGCCACGCCAGGTGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906434.1\|WP_085364266.1\|143606_144494_-\|S24-family-peptidase	unknown	unknown	gnl\|CDD\|119397
NZ_LT906434.1\|WP_085364252.1\|137833_139909_-\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_LT906434.1\|WP_085364185.1\|118068_119826_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|183976
NZ_LT906434.1\|WP_085364250.1\|142061_143033_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_LT906434.1\|WP_085364255.1\|129190_131023_+\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_LT906434.1\|WP_085364247.1\|148155_148713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364246.1\|149103_149343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364265.1\|148720_149026_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_LT906434.1\|WP_054599097.1\|119822_120332_-\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	unknown	unknown	gnl\|CDD\|225425
NZ_LT906434.1\|WP_085364182.1\|115449_116181_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_LT906434.1\|WP_085364183.1\|116268_116874_-\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_LT906434.1\|WP_095197808.1\|121075_121387_-\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|213597
NZ_LT906434.1\|WP_085364256.1\|127557_128787_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_LT906434.1\|WP_085364254.1\|131182_135094_+\|translocation/assembly-module-TamB	unknown	unknown	gnl\|CDD\|225463
NZ_LT906434.1\|WP_085364248.1\|147439_148159_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
NZ_LT906434.1\|WP_085364253.1\|135251_136622_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_LT906434.1\|WP_085364251.1\|140509_142048_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_LT906434.1\|WP_085364184.1\|117175_118072_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374230
NZ_LT906434.1\|WP_054599816.1\|144829_145075_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|372675
NZ_LT906434.1\|WP_085364249.1\|145071_147210_+\|Mu-transposase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378147

Protein	Function_ID	Function_description	E-value
NZ_LT906434.1\|WP_085364266.1\|143606_144494_-\|S24-family-peptidase	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	3.97445e-15
NZ_LT906434.1\|WP_085364252.1\|137833_139909_-\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	2.75828e-14
NZ_LT906434.1\|WP_085364185.1\|118068_119826_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase	gnl\|CDD\|183976	PRK13325, PRK13325, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase.	0
NZ_LT906434.1\|WP_085364250.1\|142061_143033_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.39102e-106
NZ_LT906434.1\|WP_085364255.1\|129190_131023_+\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	2.7806e-125
NZ_LT906434.1\|WP_085364265.1\|148720_149026_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	0.00408869
NZ_LT906434.1\|WP_054599097.1\|119822_120332_-\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	gnl\|CDD\|225425	COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane].	9.10715e-77
NZ_LT906434.1\|WP_085364182.1\|115449_116181_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.00941e-45
NZ_LT906434.1\|WP_085364183.1\|116268_116874_-\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	5.75447e-44
NZ_LT906434.1\|WP_095197808.1\|121075_121387_-\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|213597	TIGR01259, ComE_operon_protein_1, comEA protein. This model describes the ComEA protein in bacteria. The com E locus is obligatory for bacterial cell competence - the process of internalizing the exogenous added DNA. Lesions in the loci has been variously described for the appearance of competence-related pheonotypes and impairment of competence, suggesting their intimate functional role in bacterial transformation. [Cellular processes, DNA transformation].	2.3076e-24
NZ_LT906434.1\|WP_085364256.1\|127557_128787_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_LT906434.1\|WP_085364254.1\|131182_135094_+\|translocation/assembly-module-TamB	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	1.15604e-171
NZ_LT906434.1\|WP_085364248.1\|147439_148159_+\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	1.04747e-12
NZ_LT906434.1\|WP_085364253.1\|135251_136622_+\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_LT906434.1\|WP_085364251.1\|140509_142048_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	7.69236e-85
NZ_LT906434.1\|WP_085364184.1\|117175_118072_-\|hypothetical-protein	gnl\|CDD\|374230	pfam15927, Casc1_N, Cancer susceptibility candidate 1 N-terminus. This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 200 amino acids in length. The family is found in association with pfam12366. There are two completely conserved residues (N and W) that may be functionally important.	0.00171848
NZ_LT906434.1\|WP_054599816.1\|144829_145075_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	6.97721e-16
NZ_LT906434.1\|WP_085364249.1\|145071_147210_+\|Mu-transposase-C-terminal-domain-containing-protein	gnl\|CDD\|378147	pfam09299, Mu-transpos_C, Mu transposase, C-terminal. Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.	3.89231e-17

>NZ_LT906434.1|WP_085364253.1|135251_136622_+|adenylosuccinate-lyase
MINPISALSPLDGRYAKSVEALRPIFSEYGLMKARVKVELSWLKALAAEPKIAEVPAFSDFTVAEIDRVIAEFSLEDAAAVKAIEATTNHDVKAIEYWLKERFSGVPEVAAASEFIHFACTSEDINNLSHALMLQEAREAVVLPKLAEITAKLTEMAHDLAAVPMMSRTHGQPATPSTLGKEIANVVYRLQRQIKQLAAQEFLGKINGAVGNYNAHMVAYPDVDWEAHCQTFVEQALGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVWGYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPVSRWQRDLTDSTVLRNMGVGAGYTVLGLVAHLRGLNKLEANPAALAADLDATWELLAEPIQTVMRRYGVANPYEKLKDLTRGKDGITPEVLKVFVESLDIPADAKQQLLALTPALYVGKAEELAKRI
>NZ_LT906434.1|WP_085364254.1|131182_135094_+|translocation/assembly-module-TamB
MTDHQDNKNTEQLRQNGYTETLPDTRPSEKQPKKRKWLKITAVLFASLLFVFSALAGAVVWLASTESGLRYGLYNIPSWFGVNIQSKNLKGTLWKGFTGDEWRIETEGADIEISALTFDWQPDELKQKKLHIRQILAGDISVITKPTPPKEKQPPQGLPKSVSLPLEVLVDKLETGKISVGPRANKQTVYLNHLSASYAYDHQIHSLKLADINTPWNSASGNATLGVKSPFYLNAILNGSGTLDNDYIVAATRLTGSLQDVETDIRIDGDNVRLHATSVLHPFAEKLNDKIKLAQVKGFNINPSAFLSSLPKAKLEFDATIVPSFEKGIGLEGSIDLLNSAAAPADAQGIPVRKLLSGFTINDEGLIRIQDTEAQLMNKGTVGLAGTIDTAKQELALAASLRDITAADVVKQKLDGKLNGTIKVGGAFKNLETAWELDTGNALSDGLIQMHTDAKNGQQTLHFKQARVRPTNGGEINATGSLELFKNQALKLAVVSKNFNPGKLNTQFPAGSVNGTINLDGEIANQKYSGKMQFGPSTLSGVPLKGSADVVYEKAHLSRAVADILLGNNSIKTNGSFGKQGDRLNVDINAPDLSRFGFGLSGLITAKGYIAGDPAKLEADLVGQARSLRVADAVQINDLNFKLQGSPDYSRPLNVELKGNRISILGGGSPTVIDSVDLSVNGTGLSHRIRGGGNMSLGGKPYTLAVDANGGLDNKQQWKGTLSVLDIGGAFNLKLQNRMNLEAGANRVAMSAARWSAMGGSLNMENFVWDKRNGITTKGNAVNLDMSQLHNFYTPPVKHNLVLAGDWDLSYSQNARGYLNIRRQSGDVELPYRKQMLGLGALSLNTTFQNGRIDSKLDGVTGYGNINGNVVISQQFGNDIKLAPINGKISIGAPNLEAFRNFLPVGQTLRGNLEGIATIGGRVGQPQFNGTLNGNDLYYRNQDLGLILDHGVLRSRIQGQSWLIDNLRFHRGGTVELKGTVGLNNAEPNVNVDVLFNKYNALDKANRRLTLSGDAKMLYTEANGVILTGTLKADSGYFGFQKSGMPTLDDDVVVLGEVEKPKSTPTPISMNLVLDLNDNLRFSGEGLDVTLGGQLNLTAKPGEAVQGVGTVKVIKGRYKAYGQDLDITKGQISFVGPLSDPNLNIRAERRLSAVGAGVEVLGSLNNPRISLVTNEAMSEKDKLSWLILNRASSGSDSDEAALSAAAGAFLAGRVNDKLGLVDDFGFTSKRRRDAQTGELNPAEQVLTVGKQLTNNLYLGYEYGINSASQSVKLVYQLTRAIQAVARVGNLSWGGEVKYSIRFD
>NZ_LT906434.1|WP_085364255.1|129190_131023_+|outer-membrane-protein-assembly-factor
MKKHTVKLLLPALSLACTQAFAYTPSPEDYVPIKKEKKEPQQAESNGKKLPVKYPIHINVNDKEVKEMLEEHLPLISQQEEEELDKEQLGFLAEETPDNVITMLKTKGYFNGKVTVEPLGEGYQVNVTTGPRTKVDNVGVAIVGDVLQDGDLAQYYKSALENWALPVENPFDQSGWSSSKTSVLSAVTRKKYPLARLSHSQATINPYNNTADLNVVVESNRPIYFGDIQISGTKRYPESVVRGMAKFQPGSPYDLDQLLDYQQALEQDGHYSGASVQADFDNLQDDRVPVKVAVSEVKRHKLEAGVRYDSEYGLGGRIGYDYYNLFNRGYIGSFVVDTDKYETTVAAGVSQPRKSNGHYLTSNVSYTRSTTQNLEKHALRSGIWRVRERNNIESRIGVEYLTESSRVPDTNYDLGRSHATMVTASWKRQEMSTLLRPENGYYLDGKIGSTLGSLLSSTSIARARASAGYYFTPENKKIGTFIARGQVGYVYAREDQEVPSSLRFRTGGATSIRGYELDSIGLAGPNNSVLPERALAVASLEYQYPINKSFSAAVFHDMGDAALNFKKMSLKHGTGLGVRWFSPVAPFSFDIAYGHHDKKVRWHISLGTRF
>NZ_LT906434.1|WP_085364256.1|127557_128787_-|serine/threonine-transporter-SstT
MASGNPVIDAVNRVSLVQQIIIGLLLGAALAALSPSAGLAAGLLGTLFVGALKAVAPVLVFVLVMSAIASHQKGNEAYIKPIIVLYAIGTFTAALSAVIASFLFPTEIVLVSAGDVTTTPPSGIKEVMKTLLLNLVANPINALANANYIGILAWGLVLGFALRHASEQTRLMIADLADAVSTVVKWVIRFAPLGIFGLVSSTIAETGFGALAGYAKLLAVLVGCMLFIALVANPLIVWWKIRRNPYPLVLTCLRESGVTAFFTRSSAANIPVNMSLAKKLGLHEDTYSISIPLGATINMAGAAITITVLAMAAAHTQGIQVDFATALLLSLVATVSAAGASGVAGGSLLLIPLACSLFGIPNDIAMQVVAVGFIIGVVQDSAETALNSSTDVLFTAAADYGRQREEGKL
>NZ_LT906434.1|WP_095197808.1|121075_121387_-|helix-hairpin-helix-domain-containing-protein
MKKYLAGALALLWSAVSLAAVNINTATAEELKALPGIGPSKAAAIVEYRQHNGQFKSVDDLKNVKGIGEGILAKLRDEATVGGGKKPAKAAVPALKEKAKEKR
>NZ_LT906434.1|WP_054599097.1|119822_120332_-|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase
MQNWPLPDFERKICPPERLAESLAALPRPLVFTNGCFDILHRGHVTYLAQARSAGAALILALNTDASVKRQGKGSDRPINSLPNRAAVAASLASVDLVTWFDEDTPAALIELVKPDILIKGGDWPVEKIVGAQETLARGGKVYSIPFLHQTSTTQTLAKIRAVEAAENK
>NZ_LT906434.1|WP_085364185.1|118068_119826_-|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase
MTALKQQHWKLLAALSDGLPQHVSALSKNIGLRPHQINCLWQQMPPHVRGLLRQHDGQWRLVRPLAVFDETRLQQIGVEHGFQTALYHECTSSNDIVLDAAKNAPDQAQGLLVVAHQQSKGRGRQGRAWHNRLGECLMFSFGRVFEQRQHELGALALAVALACRNALFKLGVPAQIKWPNDLMVGCDKLGGILIETVRSGGKTVAVIGIGINFVLPKEVENATSVQAAFQTASSSSAVSADVLLSALLGDLNSVLARFEQNGFGVLADDYLAANRDYRRPVCLLQNGEILYEGVMAGVTAEGALRLQTGATERTIVSGEISLRPDNRPQPVQTASSGHYLLLDGGNSQLKWAWVEDGAIVHTGRSPYRDLSLLGAEWRERSDGLDIRIVGSAVCGEAKKALVAEQLSKPVEWHASMPQALGIRNHYRNVEEHGADRWFNALGSRRFTRNACVVVSCGTAVTVDALTDDNHYLGGTIMPGFHLMKEAMALKTANLNRPLGRVYPFPTTTANALASGIMDAVCGSILLMHARLKEKVGPDKPVDLIITGGGAPKVVQALPPVFALDNTVKIVDNLVIYGLLNWIQQQ
>NZ_LT906434.1|WP_085364184.1|117175_118072_-|hypothetical-protein
MKWLFAVLVALNIIVFGGMVASRVAEKQKTAVAPTVPIVGGAQQELTPPASPAKDSPPEILYPDWINKNEPRPVASEPLDDEVVLAALAQKVKEEELAKERKEREEKAKREQQEKERAAREKAEQLAQEQKEHSRSTGQCVSTASITLDEDAYHRIKGLLQQWPHAASRTVEKRSNSKKSTGPSEKTYRVLVSADGDAIEQLDRLAAKGFSGSLHEGDISVGVVSSRSAAQVLISRLATAGFGGTRIQEQGGRDNGINDRSLSVAKMHVTFFGVDDKTAQAIQNVVDRYGRLNRRSCR
>NZ_LT906434.1|WP_085364183.1|116268_116874_-|trimeric-intracellular-cation-channel-family-protein
MTATEIIHIIGTAAFAVSGYLVGVRKRLDMLGVLIAALLTAVGGGIIRDAVIGRIPVVFVENTAWIVIGITLLLSWLFKLQKSRKRELATAFLLADSLGLVAFTITGAQVGLDLDLNIFGVVMLGFVTAVGGGIVRDVLVNDIPMILRKDFYGTVSVIIGLAMYLLDRAGWINPLMLNVLLFGGYALRLWAYRVAWALPRF
>NZ_LT906434.1|WP_085364182.1|115449_116181_+|dienelactone-hydrolase-family-protein
MTVTAHTLEYRTENGLTLQSTLYLSTQAVSGLSGVLVAPEWWGVSEHVKNAAKRLAEQGYAALAMDLYGDARLTDDAAQANEWMTAVLSDTAALPERTRLGFEALAARPEVNPHRIGAIGFCFGGKVVLDMARRGDDLKAVTSFHGLLSAAAPAQEGFIKGELLIEHAGKDVLVSDADVAAFRQEMDAAKVRYHIDVFPEAKHGFTNPQATRNGEKNGVDLAYNEADAEQAWQNMLDLLERNL
>NZ_LT906434.1|WP_085364252.1|137833_139909_-|calcium-binding-protein
MSNKKTSVVAAKDGQPDTKALKSEQVSRSPQVMYGDDGDNIFRVTHPQDRVIEKINRGIDTIYSSVPYTLPKNVENLFLVGKAALDGSGNELNNAIVGNENRNRLMGYDGKDDLYGYGGNDYLDGGKGADLMVGGTGSDIYQVDDSNDKIIELVNQGTDSVFSSADYVLPEHVENLTLVGDKAIKATGNNDNNTITGNAAGNLLRGGSGDDVVDGKGGNDDVRGGDGSDKLYGGLGNDRLIGDIDARPLKNEEGQLYWRDKNDGNDYLDGGKGDDTLFGGKGDDTYFFDRGYGRDTIIDYRIPGIETLSDPEGNNTVRFGKGIRPQDLDIKVDVLKDGNIGSIWKIGLKGTQDLLLIHNQNVHGDDAAIQNFVFDSATYKPWQLEAAVGIQGNTKTVAIDNNNAYRLSEAVFGIGAGNEHPEHSYDIEKVIGGRLAYMSSDGSIRQWVKADRFYVSDSEDLVFIPNKGASEAEIRFKFHSFDPERTLSDDATHTIKFALKDLPDPEDRMFFGDVNGNLLTGGNGDDLLHGLWGNDTLNGGEGDDTLFGGAGNDTYIFGKDYGRDTISDWEGSNIVRFSKGITPQDLTLKKITHPSGMQTDWVIGFKDSADMLTIEKQLDNQKNVSVKSFVFDSGTVAYDLLESKINSKLEAALGTPAETATQAAQPAAGTDYAYRNTATASVSDDPIVLMI
>NZ_LT906434.1|WP_085364251.1|140509_142048_+|iron-ABC-transporter-permease
MAVRSFFTTLLLAVLPLGFLAVMVVAPLLALAFYENQGLVWQVLQDEYIQMRIGWTTLQAALTCLFTLLLGVPVAWTLARLEFRGRRWILRLLMLPFVMPTLVAGMGVLALFGPRGLLWAGWEDTPYLLLYGNVFFNLPVLIRAAYQGFLQVPAARLETARTLGAGTWQRFWHVERPVLQPWLAGGMCLVFLYCFSGFGLALLLGGNRYATIEVEIYQLIAYELDTATASVLVWLVLLITALAGIAYAWLSRRTASGRNIRPLTPEPPRTRTQKTMLAATLALLGLCCALPLLAVCFQAASAGASWQVWQEADTLAAAWNTLRFTFSAMLAAILLGILHAALARRVVWIRGLTFLPFMVSPVCVAFGLLLLYPEWTASLPLLIATYALLAYPFITKDILAAWDALPPNYTAAARSMGANPFQTALYVTAPLLLPSLRRGLTLAAATCVGEFAATLFLSRPEWQTLTTFIYRYLGTAGSDNHDRAMVLTAILMLLAFIVFLLLDSTEKKQQAV
>NZ_LT906434.1|WP_085364250.1|142061_143033_+|ABC-transporter-ATP-binding-protein
MLQLKHINKHYGSKTVADNITLEVAKGHILAILGRSGCGKSTLLKITAGLVEPDSGEVWINGSNLTRTPPEHRRISLVFQDYALLPHLNALQNVAFGLKMQGVHQAEARQKAQAMLTEVGLADEAQRRTHSLSGGEQQRVALARALVTDPKLMLLDEPFSSLDTGLRQQLRQLTANHIRHRNIPAVLVTHDPEEAFALADQIALMHNGRIIQLAAPGALIAAPSDARSARLIGADNVNDTRYIPRQAIHFNHPQGQNAKITAHTRLPDRSLLILIHPQHGEIQLHLDPSETHNLNLQPGSEWPLWVNARKIVWFQQDTDFQTY
>NZ_LT906434.1|WP_085364266.1|143606_144494_-|S24-family-peptidase
MKVDFSQNIELGAYELHKLIEQLAEQGITLTSLPKSGPGIKLRAQSEQWASRVVPGKGGKGGNKTIYILPGYVIEELIEKGLLNLFEEAAEEISQAATDESIYKSIYISNAASSAPNKQREIAAIYSTDPIPASMEDLVSGYKAWASHQDTANIVPVRYHINVFGSAGNGTISWQAEETEAMWFRASFFKHLGVNPNRCFCTRVKGDSMFPTLIDLGTVLWCATAKYTEEGIYLFRQYDEIRIKRLQRLNAHTFNIISDNPNKGIYPTTELDLSQTEPHDFEILGRYLWSCGIAK
>NZ_LT906434.1|WP_054599816.1|144829_145075_+|helix-turn-helix-domain-containing-protein
MHPELIKAKLRIKGFSLTDVAKQEKVGEHAVRKALRQPSLSGEKAIANVLGKELHELWPDRWTIDGKRIRPRWAHLYKEAS
>NZ_LT906434.1|WP_085364249.1|145071_147210_+|Mu-transposase-C-terminal-domain-containing-protein
MKKHYSASELVALELSGLPKTEAGVVFRAKQQNWPFIEVAGKGGRGGKRREYTPPPEVMMQIQEREMAKVLADTAPPLPVLAATNTAVSTEVRYMQTTEAQRTREGARLGVLNAVERLMAESNVGKDAAITTLLTQARLPQFEHVAKMFELALDERGAGSLKLPSSRTIKRWFAQRESNTLIPKVATADMNMPDWLPLFLKYYRLPTKPSVQMAYEAFLDALAVEMPLVKVPSIHAVRRAMSKVGNVALQDGRKGKRELKNDLPHKRREFLHLPPAAIYTADGHTFDAEVLNPMSGHPFRPEITTVIDVATRRCMGWSVGLAESRFTVLEALCHASRTAIGAVWYVDWGKGFENLMMTDEATGIMGRLGMTMKHSLAYNSQAKGVSERSHNIFTRAARKLPTYVGKDMDAEARKSLFHWTRKEIKLQGKIINSPIPTWDEFKAFIEAEIEAYNNSPHRSLLKFTDADGKKRHMTPNEMWALKVKEFGEPPKVLAEDEGWLFRPQKMCTVRRGEVQLFNNVYFSNLLEEFNGEELRVGYDVQDAQWVWVYDDAGRLICKAEWHGNSQSYMPESVIEQAMDKRNDAALKRVEIKRENVLAERRQAVIEHESSVNLGGITLDMSRLKEQGAKVLARREEPETVEAVFKVVKPEPIQTASSWEAPDALNPKAQYAEYKRLASCEAAELNETQAKWLEWYVNSGRVELMEQMARAYG
>NZ_LT906434.1|WP_085364248.1|147439_148159_+|ATP-binding-protein
MKIANINNLSLVAIAMQRLVNRQDGLPGLGVLYGPSGYGKTTATVAVANQTRAYYVQMRSAWGKKTLLEKICFEMGLPPARTTAGCLDVICEQLAASQRPLIIDEADYLVSKEGMVELVRDIYEGSQAPVMLVGEELLPNKLKKYERFHGRVLAWVPAQPVSVDDAAELAAVYAPKVRLSNDLLAHLVEIAHGSVRRVTVNLVNLAAFAAEKGLAELGLGDIAKAELYKGEAPKRGTKV
>NZ_LT906434.1|WP_085364247.1|148155_148713_+|hypothetical-protein
MKPVKELTLPRNNRQLVWTALRASRESWVTLAALSEQADVKSRTVYMYLQALIAAGYVAVETAADRCKLYRLTKDAGVDAPRLRPDGTEATPKNTEIIWRTIKIMHTFTLDSLTAHVRMTHEVQREWVKKYVISLLAAGYLGKRSREDYVLLHNTGSQAPQLLNIREVYDPNLKQIMLREVPDYE
>NZ_LT906434.1|WP_085364265.1|148720_149026_+|helix-turn-helix-transcriptional-regulator
MNEEWFSVLKREIESSSQRSVADKLGYSMTAINLVVNGKYKGKTDKIAAKVMRVYNIKCPFSGNVITLQDCRDIAHAAAPTHNPIKMGHWKACLKCPNRPD
>NZ_LT906434.1|WP_085364246.1|149103_149343_+|hypothetical-protein
MHKIKLRELLMISVIVMVITACANRCTEPQPVRSYFEHETPEQRLMREKQDAADFEALQAEKAYERMSDEERMRGVVYE

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Crispr_ID: NZ_LT906434_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906434_2

143171-143414

Orphan

Consensus_repeat	Method
NNNNNNNNNNGTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CRT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGAT	PILER-CR
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_LT906434_2

>merge|NZ_LT906434|2|143171-143414|CRT,PILER-CR,CRISPRCasFinder
ACGTTTGAATTTTTCAATGATTAGGCGGCTGAGGGCAGCTGACGATTTTTTTTCAAGTTGGCCGGCTTGTTTTTGTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGATATTGCATCCGCTATGCTTTTTTCTTCGTCTGTATGTTTCAACACACAGCCGCCCGAAGGCGGCTGAATTTTCACTTTGCGGCCGCGTCCGGCCATGCCGCCGTTTCAACACACAGCCGCCCGAAGGCGGCTGAT

>NZ_LT906434|2|2|143171-143413|CRT
ACGTTTGAATTTTTCAATGATTAGGCGGCTGA	GGGCAGCTGACGATTTTTTTTCAAGTTGGCCGGCTTGTTTTTGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	TATTGCATCCGCTATGCTTTTTTCTTCGTCTGTAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	ATTTTCACTTTGCGGCCGCGTCCGGCCATGCCGCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA

>NZ_LT906434|2|2|143248-143414|PILER-CR
GTTTCAACACACAGCCGCCCGAAGGCGGCTGAT	ATTGCATCCGCTATGCTTTTTTCTTCGTCTGTAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGAA	TTTTCACTTTGCGGCCGCGTCCGGCCATGCCGCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGAT

>NZ_LT906434|2|2|143248-143413|CRISPRCasFinder
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	TATTGCATCCGCTATGCTTTTTTCTTCGTCTGTAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	ATTTTCACTTTGCGGCCGCGTCCGGCCATGCCGCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906434.1\|WP_085364266.1\|143606_144494_-\|S24-family-peptidase	unknown	unknown	gnl\|CDD\|119397
NZ_LT906434.1\|WP_085364252.1\|137833_139909_-\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_LT906434.1\|WP_085364185.1\|118068_119826_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|183976
NZ_LT906434.1\|WP_085364253.1\|135251_136622_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_LT906434.1\|WP_085364255.1\|129190_131023_+\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_LT906434.1\|WP_085364243.1\|150750_151581_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364245.1\|149694_150162_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364265.1\|148720_149026_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_LT906434.1\|WP_054599097.1\|119822_120332_-\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	unknown	unknown	gnl\|CDD\|225425
NZ_LT906434.1\|WP_054599816.1\|144829_145075_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|372675
NZ_LT906434.1\|WP_085364247.1\|148155_148713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_095197808.1\|121075_121387_-\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|213597
NZ_LT906434.1\|WP_085364256.1\|127557_128787_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_LT906434.1\|WP_085364254.1\|131182_135094_+\|translocation/assembly-module-TamB	unknown	unknown	gnl\|CDD\|225463
NZ_LT906434.1\|WP_157739131.1\|150163_150754_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_LT906434.1\|WP_085364250.1\|142061_143033_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_LT906434.1\|WP_085364251.1\|140509_142048_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_LT906434.1\|WP_085364246.1\|149103_149343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364248.1\|147439_148159_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
NZ_LT906434.1\|WP_085364249.1\|145071_147210_+\|Mu-transposase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378147

Protein	Function_ID	Function_description	E-value
NZ_LT906434.1\|WP_085364266.1\|143606_144494_-\|S24-family-peptidase	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	3.97445e-15
NZ_LT906434.1\|WP_085364252.1\|137833_139909_-\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	2.75828e-14
NZ_LT906434.1\|WP_085364185.1\|118068_119826_-\|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase	gnl\|CDD\|183976	PRK13325, PRK13325, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase.	0
NZ_LT906434.1\|WP_085364253.1\|135251_136622_+\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_LT906434.1\|WP_085364255.1\|129190_131023_+\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	2.7806e-125
NZ_LT906434.1\|WP_085364265.1\|148720_149026_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	0.00408869
NZ_LT906434.1\|WP_054599097.1\|119822_120332_-\|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase	gnl\|CDD\|225425	COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane].	9.10715e-77
NZ_LT906434.1\|WP_054599816.1\|144829_145075_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	6.97721e-16
NZ_LT906434.1\|WP_095197808.1\|121075_121387_-\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|213597	TIGR01259, ComE_operon_protein_1, comEA protein. This model describes the ComEA protein in bacteria. The com E locus is obligatory for bacterial cell competence - the process of internalizing the exogenous added DNA. Lesions in the loci has been variously described for the appearance of competence-related pheonotypes and impairment of competence, suggesting their intimate functional role in bacterial transformation. [Cellular processes, DNA transformation].	2.3076e-24
NZ_LT906434.1\|WP_085364256.1\|127557_128787_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_LT906434.1\|WP_085364254.1\|131182_135094_+\|translocation/assembly-module-TamB	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	1.15604e-171
NZ_LT906434.1\|WP_157739131.1\|150163_150754_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	1.01731e-09
NZ_LT906434.1\|WP_085364250.1\|142061_143033_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.39102e-106
NZ_LT906434.1\|WP_085364251.1\|140509_142048_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	7.69236e-85
NZ_LT906434.1\|WP_085364248.1\|147439_148159_+\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	1.04747e-12
NZ_LT906434.1\|WP_085364249.1\|145071_147210_+\|Mu-transposase-C-terminal-domain-containing-protein	gnl\|CDD\|378147	pfam09299, Mu-transpos_C, Mu transposase, C-terminal. Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.	3.89231e-17

>NZ_LT906434.1|WP_085364250.1|142061_143033_+|ABC-transporter-ATP-binding-protein
MLQLKHINKHYGSKTVADNITLEVAKGHILAILGRSGCGKSTLLKITAGLVEPDSGEVWINGSNLTRTPPEHRRISLVFQDYALLPHLNALQNVAFGLKMQGVHQAEARQKAQAMLTEVGLADEAQRRTHSLSGGEQQRVALARALVTDPKLMLLDEPFSSLDTGLRQQLRQLTANHIRHRNIPAVLVTHDPEEAFALADQIALMHNGRIIQLAAPGALIAAPSDARSARLIGADNVNDTRYIPRQAIHFNHPQGQNAKITAHTRLPDRSLLILIHPQHGEIQLHLDPSETHNLNLQPGSEWPLWVNARKIVWFQQDTDFQTY
>NZ_LT906434.1|WP_085364251.1|140509_142048_+|iron-ABC-transporter-permease
MAVRSFFTTLLLAVLPLGFLAVMVVAPLLALAFYENQGLVWQVLQDEYIQMRIGWTTLQAALTCLFTLLLGVPVAWTLARLEFRGRRWILRLLMLPFVMPTLVAGMGVLALFGPRGLLWAGWEDTPYLLLYGNVFFNLPVLIRAAYQGFLQVPAARLETARTLGAGTWQRFWHVERPVLQPWLAGGMCLVFLYCFSGFGLALLLGGNRYATIEVEIYQLIAYELDTATASVLVWLVLLITALAGIAYAWLSRRTASGRNIRPLTPEPPRTRTQKTMLAATLALLGLCCALPLLAVCFQAASAGASWQVWQEADTLAAAWNTLRFTFSAMLAAILLGILHAALARRVVWIRGLTFLPFMVSPVCVAFGLLLLYPEWTASLPLLIATYALLAYPFITKDILAAWDALPPNYTAAARSMGANPFQTALYVTAPLLLPSLRRGLTLAAATCVGEFAATLFLSRPEWQTLTTFIYRYLGTAGSDNHDRAMVLTAILMLLAFIVFLLLDSTEKKQQAV
>NZ_LT906434.1|WP_085364252.1|137833_139909_-|calcium-binding-protein
MSNKKTSVVAAKDGQPDTKALKSEQVSRSPQVMYGDDGDNIFRVTHPQDRVIEKINRGIDTIYSSVPYTLPKNVENLFLVGKAALDGSGNELNNAIVGNENRNRLMGYDGKDDLYGYGGNDYLDGGKGADLMVGGTGSDIYQVDDSNDKIIELVNQGTDSVFSSADYVLPEHVENLTLVGDKAIKATGNNDNNTITGNAAGNLLRGGSGDDVVDGKGGNDDVRGGDGSDKLYGGLGNDRLIGDIDARPLKNEEGQLYWRDKNDGNDYLDGGKGDDTLFGGKGDDTYFFDRGYGRDTIIDYRIPGIETLSDPEGNNTVRFGKGIRPQDLDIKVDVLKDGNIGSIWKIGLKGTQDLLLIHNQNVHGDDAAIQNFVFDSATYKPWQLEAAVGIQGNTKTVAIDNNNAYRLSEAVFGIGAGNEHPEHSYDIEKVIGGRLAYMSSDGSIRQWVKADRFYVSDSEDLVFIPNKGASEAEIRFKFHSFDPERTLSDDATHTIKFALKDLPDPEDRMFFGDVNGNLLTGGNGDDLLHGLWGNDTLNGGEGDDTLFGGAGNDTYIFGKDYGRDTISDWEGSNIVRFSKGITPQDLTLKKITHPSGMQTDWVIGFKDSADMLTIEKQLDNQKNVSVKSFVFDSGTVAYDLLESKINSKLEAALGTPAETATQAAQPAAGTDYAYRNTATASVSDDPIVLMI
>NZ_LT906434.1|WP_085364253.1|135251_136622_+|adenylosuccinate-lyase
MINPISALSPLDGRYAKSVEALRPIFSEYGLMKARVKVELSWLKALAAEPKIAEVPAFSDFTVAEIDRVIAEFSLEDAAAVKAIEATTNHDVKAIEYWLKERFSGVPEVAAASEFIHFACTSEDINNLSHALMLQEAREAVVLPKLAEITAKLTEMAHDLAAVPMMSRTHGQPATPSTLGKEIANVVYRLQRQIKQLAAQEFLGKINGAVGNYNAHMVAYPDVDWEAHCQTFVEQALGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVWGYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPVSRWQRDLTDSTVLRNMGVGAGYTVLGLVAHLRGLNKLEANPAALAADLDATWELLAEPIQTVMRRYGVANPYEKLKDLTRGKDGITPEVLKVFVESLDIPADAKQQLLALTPALYVGKAEELAKRI
>NZ_LT906434.1|WP_085364254.1|131182_135094_+|translocation/assembly-module-TamB
MTDHQDNKNTEQLRQNGYTETLPDTRPSEKQPKKRKWLKITAVLFASLLFVFSALAGAVVWLASTESGLRYGLYNIPSWFGVNIQSKNLKGTLWKGFTGDEWRIETEGADIEISALTFDWQPDELKQKKLHIRQILAGDISVITKPTPPKEKQPPQGLPKSVSLPLEVLVDKLETGKISVGPRANKQTVYLNHLSASYAYDHQIHSLKLADINTPWNSASGNATLGVKSPFYLNAILNGSGTLDNDYIVAATRLTGSLQDVETDIRIDGDNVRLHATSVLHPFAEKLNDKIKLAQVKGFNINPSAFLSSLPKAKLEFDATIVPSFEKGIGLEGSIDLLNSAAAPADAQGIPVRKLLSGFTINDEGLIRIQDTEAQLMNKGTVGLAGTIDTAKQELALAASLRDITAADVVKQKLDGKLNGTIKVGGAFKNLETAWELDTGNALSDGLIQMHTDAKNGQQTLHFKQARVRPTNGGEINATGSLELFKNQALKLAVVSKNFNPGKLNTQFPAGSVNGTINLDGEIANQKYSGKMQFGPSTLSGVPLKGSADVVYEKAHLSRAVADILLGNNSIKTNGSFGKQGDRLNVDINAPDLSRFGFGLSGLITAKGYIAGDPAKLEADLVGQARSLRVADAVQINDLNFKLQGSPDYSRPLNVELKGNRISILGGGSPTVIDSVDLSVNGTGLSHRIRGGGNMSLGGKPYTLAVDANGGLDNKQQWKGTLSVLDIGGAFNLKLQNRMNLEAGANRVAMSAARWSAMGGSLNMENFVWDKRNGITTKGNAVNLDMSQLHNFYTPPVKHNLVLAGDWDLSYSQNARGYLNIRRQSGDVELPYRKQMLGLGALSLNTTFQNGRIDSKLDGVTGYGNINGNVVISQQFGNDIKLAPINGKISIGAPNLEAFRNFLPVGQTLRGNLEGIATIGGRVGQPQFNGTLNGNDLYYRNQDLGLILDHGVLRSRIQGQSWLIDNLRFHRGGTVELKGTVGLNNAEPNVNVDVLFNKYNALDKANRRLTLSGDAKMLYTEANGVILTGTLKADSGYFGFQKSGMPTLDDDVVVLGEVEKPKSTPTPISMNLVLDLNDNLRFSGEGLDVTLGGQLNLTAKPGEAVQGVGTVKVIKGRYKAYGQDLDITKGQISFVGPLSDPNLNIRAERRLSAVGAGVEVLGSLNNPRISLVTNEAMSEKDKLSWLILNRASSGSDSDEAALSAAAGAFLAGRVNDKLGLVDDFGFTSKRRRDAQTGELNPAEQVLTVGKQLTNNLYLGYEYGINSASQSVKLVYQLTRAIQAVARVGNLSWGGEVKYSIRFD
>NZ_LT906434.1|WP_085364255.1|129190_131023_+|outer-membrane-protein-assembly-factor
MKKHTVKLLLPALSLACTQAFAYTPSPEDYVPIKKEKKEPQQAESNGKKLPVKYPIHINVNDKEVKEMLEEHLPLISQQEEEELDKEQLGFLAEETPDNVITMLKTKGYFNGKVTVEPLGEGYQVNVTTGPRTKVDNVGVAIVGDVLQDGDLAQYYKSALENWALPVENPFDQSGWSSSKTSVLSAVTRKKYPLARLSHSQATINPYNNTADLNVVVESNRPIYFGDIQISGTKRYPESVVRGMAKFQPGSPYDLDQLLDYQQALEQDGHYSGASVQADFDNLQDDRVPVKVAVSEVKRHKLEAGVRYDSEYGLGGRIGYDYYNLFNRGYIGSFVVDTDKYETTVAAGVSQPRKSNGHYLTSNVSYTRSTTQNLEKHALRSGIWRVRERNNIESRIGVEYLTESSRVPDTNYDLGRSHATMVTASWKRQEMSTLLRPENGYYLDGKIGSTLGSLLSSTSIARARASAGYYFTPENKKIGTFIARGQVGYVYAREDQEVPSSLRFRTGGATSIRGYELDSIGLAGPNNSVLPERALAVASLEYQYPINKSFSAAVFHDMGDAALNFKKMSLKHGTGLGVRWFSPVAPFSFDIAYGHHDKKVRWHISLGTRF
>NZ_LT906434.1|WP_085364256.1|127557_128787_-|serine/threonine-transporter-SstT
MASGNPVIDAVNRVSLVQQIIIGLLLGAALAALSPSAGLAAGLLGTLFVGALKAVAPVLVFVLVMSAIASHQKGNEAYIKPIIVLYAIGTFTAALSAVIASFLFPTEIVLVSAGDVTTTPPSGIKEVMKTLLLNLVANPINALANANYIGILAWGLVLGFALRHASEQTRLMIADLADAVSTVVKWVIRFAPLGIFGLVSSTIAETGFGALAGYAKLLAVLVGCMLFIALVANPLIVWWKIRRNPYPLVLTCLRESGVTAFFTRSSAANIPVNMSLAKKLGLHEDTYSISIPLGATINMAGAAITITVLAMAAAHTQGIQVDFATALLLSLVATVSAAGASGVAGGSLLLIPLACSLFGIPNDIAMQVVAVGFIIGVVQDSAETALNSSTDVLFTAAADYGRQREEGKL
>NZ_LT906434.1|WP_095197808.1|121075_121387_-|helix-hairpin-helix-domain-containing-protein
MKKYLAGALALLWSAVSLAAVNINTATAEELKALPGIGPSKAAAIVEYRQHNGQFKSVDDLKNVKGIGEGILAKLRDEATVGGGKKPAKAAVPALKEKAKEKR
>NZ_LT906434.1|WP_054599097.1|119822_120332_-|bifunctional-heptose-7-phosphate-kinase/heptose-1-phosphate-adenyltransferase
MQNWPLPDFERKICPPERLAESLAALPRPLVFTNGCFDILHRGHVTYLAQARSAGAALILALNTDASVKRQGKGSDRPINSLPNRAAVAASLASVDLVTWFDEDTPAALIELVKPDILIKGGDWPVEKIVGAQETLARGGKVYSIPFLHQTSTTQTLAKIRAVEAAENK
>NZ_LT906434.1|WP_085364185.1|118068_119826_-|bifunctional-biotin--[acetyl-CoA-carboxylase]-ligase/type-III-pantothenate-kinase
MTALKQQHWKLLAALSDGLPQHVSALSKNIGLRPHQINCLWQQMPPHVRGLLRQHDGQWRLVRPLAVFDETRLQQIGVEHGFQTALYHECTSSNDIVLDAAKNAPDQAQGLLVVAHQQSKGRGRQGRAWHNRLGECLMFSFGRVFEQRQHELGALALAVALACRNALFKLGVPAQIKWPNDLMVGCDKLGGILIETVRSGGKTVAVIGIGINFVLPKEVENATSVQAAFQTASSSSAVSADVLLSALLGDLNSVLARFEQNGFGVLADDYLAANRDYRRPVCLLQNGEILYEGVMAGVTAEGALRLQTGATERTIVSGEISLRPDNRPQPVQTASSGHYLLLDGGNSQLKWAWVEDGAIVHTGRSPYRDLSLLGAEWRERSDGLDIRIVGSAVCGEAKKALVAEQLSKPVEWHASMPQALGIRNHYRNVEEHGADRWFNALGSRRFTRNACVVVSCGTAVTVDALTDDNHYLGGTIMPGFHLMKEAMALKTANLNRPLGRVYPFPTTTANALASGIMDAVCGSILLMHARLKEKVGPDKPVDLIITGGGAPKVVQALPPVFALDNTVKIVDNLVIYGLLNWIQQQ
>NZ_LT906434.1|WP_085364266.1|143606_144494_-|S24-family-peptidase
MKVDFSQNIELGAYELHKLIEQLAEQGITLTSLPKSGPGIKLRAQSEQWASRVVPGKGGKGGNKTIYILPGYVIEELIEKGLLNLFEEAAEEISQAATDESIYKSIYISNAASSAPNKQREIAAIYSTDPIPASMEDLVSGYKAWASHQDTANIVPVRYHINVFGSAGNGTISWQAEETEAMWFRASFFKHLGVNPNRCFCTRVKGDSMFPTLIDLGTVLWCATAKYTEEGIYLFRQYDEIRIKRLQRLNAHTFNIISDNPNKGIYPTTELDLSQTEPHDFEILGRYLWSCGIAK
>NZ_LT906434.1|WP_054599816.1|144829_145075_+|helix-turn-helix-domain-containing-protein
MHPELIKAKLRIKGFSLTDVAKQEKVGEHAVRKALRQPSLSGEKAIANVLGKELHELWPDRWTIDGKRIRPRWAHLYKEAS
>NZ_LT906434.1|WP_085364249.1|145071_147210_+|Mu-transposase-C-terminal-domain-containing-protein
MKKHYSASELVALELSGLPKTEAGVVFRAKQQNWPFIEVAGKGGRGGKRREYTPPPEVMMQIQEREMAKVLADTAPPLPVLAATNTAVSTEVRYMQTTEAQRTREGARLGVLNAVERLMAESNVGKDAAITTLLTQARLPQFEHVAKMFELALDERGAGSLKLPSSRTIKRWFAQRESNTLIPKVATADMNMPDWLPLFLKYYRLPTKPSVQMAYEAFLDALAVEMPLVKVPSIHAVRRAMSKVGNVALQDGRKGKRELKNDLPHKRREFLHLPPAAIYTADGHTFDAEVLNPMSGHPFRPEITTVIDVATRRCMGWSVGLAESRFTVLEALCHASRTAIGAVWYVDWGKGFENLMMTDEATGIMGRLGMTMKHSLAYNSQAKGVSERSHNIFTRAARKLPTYVGKDMDAEARKSLFHWTRKEIKLQGKIINSPIPTWDEFKAFIEAEIEAYNNSPHRSLLKFTDADGKKRHMTPNEMWALKVKEFGEPPKVLAEDEGWLFRPQKMCTVRRGEVQLFNNVYFSNLLEEFNGEELRVGYDVQDAQWVWVYDDAGRLICKAEWHGNSQSYMPESVIEQAMDKRNDAALKRVEIKRENVLAERRQAVIEHESSVNLGGITLDMSRLKEQGAKVLARREEPETVEAVFKVVKPEPIQTASSWEAPDALNPKAQYAEYKRLASCEAAELNETQAKWLEWYVNSGRVELMEQMARAYG
>NZ_LT906434.1|WP_085364248.1|147439_148159_+|ATP-binding-protein
MKIANINNLSLVAIAMQRLVNRQDGLPGLGVLYGPSGYGKTTATVAVANQTRAYYVQMRSAWGKKTLLEKICFEMGLPPARTTAGCLDVICEQLAASQRPLIIDEADYLVSKEGMVELVRDIYEGSQAPVMLVGEELLPNKLKKYERFHGRVLAWVPAQPVSVDDAAELAAVYAPKVRLSNDLLAHLVEIAHGSVRRVTVNLVNLAAFAAEKGLAELGLGDIAKAELYKGEAPKRGTKV
>NZ_LT906434.1|WP_085364247.1|148155_148713_+|hypothetical-protein
MKPVKELTLPRNNRQLVWTALRASRESWVTLAALSEQADVKSRTVYMYLQALIAAGYVAVETAADRCKLYRLTKDAGVDAPRLRPDGTEATPKNTEIIWRTIKIMHTFTLDSLTAHVRMTHEVQREWVKKYVISLLAAGYLGKRSREDYVLLHNTGSQAPQLLNIREVYDPNLKQIMLREVPDYE
>NZ_LT906434.1|WP_085364265.1|148720_149026_+|helix-turn-helix-transcriptional-regulator
MNEEWFSVLKREIESSSQRSVADKLGYSMTAINLVVNGKYKGKTDKIAAKVMRVYNIKCPFSGNVITLQDCRDIAHAAAPTHNPIKMGHWKACLKCPNRPD
>NZ_LT906434.1|WP_085364246.1|149103_149343_+|hypothetical-protein
MHKIKLRELLMISVIVMVITACANRCTEPQPVRSYFEHETPEQRLMREKQDAADFEALQAEKAYERMSDEERMRGVVYE
>NZ_LT906434.1|WP_085364245.1|149694_150162_+|hypothetical-protein
MNRLADDLIRAAEDTQTPAHLNLLLNEAALCIMRLETRDLYDQKRLEWLEDLGSFAVDKKDGEHPTVTVQMCEKAYFCASAPTVREAIDLAFEECSGVSVCKHDPEAAERAKFEAWMCRLNNGDRLARNPDDGGYEDVSIDYAWIAWKERAKETV
>NZ_LT906434.1|WP_157739131.1|150163_150754_+|DUF2786-domain-containing-protein
MDKEKALDKIKKCLALSKSANEHEAAQALKHAQALMAKYELDERDVALAEINITAAEKNVPERPQDWQWHLMNMVAGVFGCKAAAWGVEVQFYGLGNRPDLAAYAFDVVYRQLAAARRRYLKEKCTARKPSNRVYLANQYCEGWIWGVKRNVANFAMSDQEITLLEDYRKNQLKVVEVGSREKHTPSALKVAEKMA
>NZ_LT906434.1|WP_085364243.1|150750_151581_+|hypothetical-protein
MNTKCPNCGAVHSLDSLIGNDGAADLIKAVLEFDAAIGKAAVRYVGLFRPAKSQLTFARTAKLLGELLPDIQAGQISRDGVVYPAPPEAWIYGFQTAIDARDVGRLKLPLKSHGYLYEVISGWRPSETAAMPATRQPSMGDAAVSTKLRQGVTALSQWAGEDWLKQEIAAGFAVLSAMNLKGRPAAPDLAVVAELWVQRLQGRDEKPVEQFDRVRFQTAFKALQDAAEWPNVADLIRNLPPRLIPRAMLEKPKPDRAKGREELEKVKETLKGNKKC

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Crispr_ID: NZ_LT906434_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT906434_3

184727-188804

TypeI

Consensus_repeat	Method
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	PILER-CR
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CRISPRCasFinder
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CRT

61 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_LT906434_3

>merge|NZ_LT906434|3|184727-188804|PILER-CR,CRISPRCasFinder,CRT
GTTTCAACACACAGCCGCTCGAAGGCGGCTGAATCAGCACGCGGCAGATGTGTTGGGGCATCATCTGTTTCAACACACAGCCGCCCGAAGGCGGCTGACATGCGTCGATTTCGTCGTAGCGCAGGCGCACGTCGTTTCAACACACAGCCGCCCGAAGGCGGCTGACCTTTGGCTTGCAACACCGGTGTCAGTTCGCGGCTGTTTCAACACACAGCCGCCCGAAAGCGGCTGAATACCCAATGCTCGAGACCATCAAGGCGGAGCTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGATGGCTATCAAAAAAGCACAGGCATTCTGTTTGTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTGCCTGACTTCATCGCCTCATGCATCGCGGCATGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTATCTGTTGCGCCGGGGGACTTGGGGGGATATGTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAAACATTGCTGCCCGTTTCTACAAATTCACACATGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCTGCGGAAGAGCGGCGCCCCTTAAATGATTTGGTGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAGTGTAAATGTCATTTACTTTATCCGTAATAGAGGTTTCAACACACAGCCGCCCGAAAGCGGCTGCCAAAAACTCGGCAAAATCATGCACGGCGTAATGCTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGCACCGCGCTCCATCTCCTCTTTATGGGTTTGATAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAAATTTGTAAAGGAACTTATCATGAACAAATCAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCATCAGCAGCGGGCGGATTTTTGGGCGGCCTTGCCGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTAAAGCCCCGCTACAACGCCCAAAATGGCAAGGGATTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTGCCGGTAGTAAATAAGCCGACACAGAAATTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTCAGATTACCCTGATTTCAGCTTACTTCCAATAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCGAGTTGCTTAAGGGTAGCGGTAAGATTTAATCAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTTTCTTTCAACAGGGCGGTAAATTCGTCTTCCGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCCGCAGGCATCAACCCGCTTACCCAATTGCATGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTGCCGCCCGTGTCTTCCGAGCTGCTGGTCACTCACGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCTGCGCGATTTGTTCAGCGGCTTTATTGCCATTCTCTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCGCGGCCAAAAACGCATCGGCCTGCGCGCGGGTCTGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTTACTTTGGGGGCTGCGTACTTGGTTTTTTGGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCACACCCTTTTTCTGCAAAAACTGTACCGTCTCCAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGTGTTTCGAGCACATCATCATCGCAGGTTTGCGGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTATCTCTGTATAGATATTGTCCTCAGCGTACAAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTGATTGTGAGCAACCAATCAACGGTCAAGACAAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGTAATTAACGCCCAATCCTGCGTTTCCAGCAGTGTTTCAACACACAGCCGCCCGAAGGCGGCTGTCACGCAGTTTCAGAAAGCTGAACAAAATGAAGATGTTTCAACACACAGTCGCCCGAAGGCGGCTGCTGTGTAGGCTGTATCTCGCACTTATGCGGCTGGTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTCCTGTTTAATCGAGTTGCCTGACGCACCACGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGACTATGGCAAATCCAAAAAAAGACACCCTCGTCGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCAAAAACTCAATAGTTCGGGGGAGCGATGAGCTAGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGTTGCCGGTTGCCGTGCTGGATGCGTTGGCGCTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAGAAGGTGGCTTGGCCTTTTTAACCGGCTTTATTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTGGGGCGCAGGCAGAATGTCCATCGTGTCGGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTGGCGGTAGCAGCTGTATTTTACCCTCTGCCAACGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGCCTTTGCTTTCGCCGTATTGCTCGCAACAAGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCGCAAATTTTCCATACGATATAGCATACTGTCTGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTTGACAATTGTCGGCATCACTTTCCTTGAGTGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTGCCCGCCAAGCTGCAACAAGACCCGACTTGGCGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCGGTTTTTTGACCTTTAAGGGGACTTTGATGGTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGAATAATTTCATCGGCAGTTGCCTCAACAATACGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCCATGCAGGATCAGGGTGTTCAGGTCGGTATATGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTCTCGCGTACTCTGATTTGGTTTTCGTTCCACTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAGCAGCTTGACTATTTGGCCGACCGCAAACTGGTGGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGAAAGCAGGAATTTAACATACCTTTGCATTACTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCTGAATCTGATTTATTAGGTTTTCTGATAAAAGGCGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCATCAACATATGCACGATTGATGCGGTTTTGCCCGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGGTAGCGTAATATTCAAGGCCGTTTTTTTATTGTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTAAACCTGATTAAGTCTGATTTCGGCCACATCGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGCCAGCTTTTCGGCTTGTGTTTGGTTGAATTTCTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTTAAACAAGGCCAAGTCGGCATCATTGCTGATAAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCAACTTGCTTTGCCGCGCTGTTGACGTATGCTGTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGATTAGGCCAAAAAAAATCCGCCCGAAGGCGGATGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCATGCCATCTTCTCCGCTACTGCAGACACGCAATGTTTCAACACACAGCCGCCCGAAGGCGGCTGCGTTCATTTCGTAGTCCTTTTTGAGAGGATTTATGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGCTATTGCGTTCAAGTTTACGCGCTGATTTTAACCTGTTTCAACACACAGCCGCCCGAAGGCGGCTGCATTCAGGCGGGGGAACAGTTCAGATGACCGAATATGTTTCAACACACAGCCGCCCGAAGGCGGCTGCCTCTTTACCCGCATCGGTACGCGCTTGCAGCGCGAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGC

>NZ_LT906434|3|3|184727-188804|PILER-CR
GTTTCAACACACAGCCGCTCGAAGGCGGCTGA	ATCAGCACGCGGCAGATGTGTTGGGGCATCATCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CATGCGTCGATTTCGTCGTAGCGCAGGCGCACGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CCTTTGGCTTGCAACACCGGTGTCAGTTCGCGGCT
GTTTCAACACACAGCCGCCCGAAAGCGGCTGA	ATACCCAATGCTCGAGACCATCAAGGCGGAGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	TGGCTATCAAAAAAGCACAGGCATTCTGTTTGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTGCCTGACTTCATCGCCTCATGCATCGCGGCAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATCTGTTGCGCCGGGGGACTTGGGGGGATATGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AAACATTGCTGCCCGTTTCTACAAATTCACACAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGCGGAAGAGCGGCGCCCCTTAAATGATTTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGTGTAAATGTCATTTACTTTATCCGTAATAGAG
GTTTCAACACACAGCCGCCCGAAAGCGGCTGC	CAAAAACTCGGCAAAATCATGCACGGCGTAATGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCACCGCGCTCCATCTCCTCTTTATGGGTTTGATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AAATTTGTAAAGGAACTTATCATGAACAAATCAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	ATCAGCAGCGGGCGGATTTTTGGGCGGCCTTGCCG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TAAAGCCCCGCTACAACGCCCAAAATGGCAAGGG
ATTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTGCCGGTAGTAAATAAGCCGACACAGAAATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTCAGATTACCCTGATTTCAGCTTACTTCCAATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGAGTTGCTTAAGGGTAGCGGTAAGATTTAATCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTTTCTTTCAACAGGGCGGTAAATTCGTCTTCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CCGCAGGCATCAACCCGCTTACCCAATTGCATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGCCGCCCGTGTCTTCCGAGCTGCTGGTCACTCAC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGCGCGATTTGTTCAGCGGCTTTATTGCCATTCTCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGCGGCCAAAAACGCATCGGCCTGCGCGCGGGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTTACTTTGGGGGCTGCGTACTTGGTTTTTTGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CACACCCTTTTTCTGCAAAAACTGTACCGTCTCCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTGTTTCGAGCACATCATCATCGCAGGTTTGCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATCTCTGTATAGATATTGTCCTCAGCGTACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGATTGTGAGCAACCAATCAACGGTCAAGACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTAATTAACGCCCAATCCTGCGTTTCCAGCAGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGT	CACGCAGTTTCAGAAAGCTGAACAAAATGAAGAT
GTTTCAACACACAGTCGCCCGAAGGCGGCTGC	TGTGTAGGCTGTATCTCGCACTTATGCGGCTGGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTCCTGTTTAATCGAGTTGCCTGACGCACCACGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GACTATGGCAAATCCAAAAAAAGACACCCTCGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CAAAAACTCAATAGTTCGGGGGAGCGATGAGCTAG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTTGCCGGTTGCCGTGCTGGATGCGTTGGCGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGAAGGTGGCTTGGCCTTTTTAACCGGCTTTATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTGGGGCGCAGGCAGAATGTCCATCGTGTCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGGCGGTAGCAGCTGTATTTTACCCTCTGCCAACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCCTTTGCTTTCGCCGTATTGCTCGCAACAAGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGCAAATTTTCCATACGATATAGCATACTGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTGACAATTGTCGGCATCACTTTCCTTGAGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGCCCGCCAAGCTGCAACAAGACCCGACTTGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGGTTTTTTGACCTTTAAGGGGACTTTGATGGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GAATAATTTCATCGGCAGTTGCCTCAACAATACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CCATGCAGGATCAGGGTGTTCAGGTCGGTATATG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TCTCGCGTACTCTGATTTGGTTTTCGTTCCACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGCAGCTTGACTATTTGGCCGACCGCAAACTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GAAAGCAGGAATTTAACATACCTTTGCATTACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGAATCTGATTTATTAGGTTTTCTGATAAAAGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CATCAACATATGCACGATTGATGCGGTTTTGCCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GGTAGCGTAATATTCAAGGCCGTTTTTTTATTGTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TAAACCTGATTAAGTCTGATTTCGGCCACATCGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCCAGCTTTTCGGCTTGTGTTTGGTTGAATTTCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTAAACAAGGCCAAGTCGGCATCATTGCTGATAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AACTTGCTTTGCCGCGCTGTTGACGTATGCTGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GATTAGGCCAAAAAAAATCCGCCCGAAGGCGGAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CATGCCATCTTCTCCGCTACTGCAGACACGCAAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTTCATTTCGTAGTCCTTTTTGAGAGGATTTATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATTGCGTTCAAGTTTACGCGCTGATTTTAACCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	ATTCAGGCGGGGGAACAGTTCAGATGACCGAATAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTCTTTACCCGCATCGGTACGCGCTTGCAGCGCGAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC

>NZ_LT906434|3|3|184727-188804|CRISPRCasFinder
GTTTCAACACACAGCCGCTCGAAGGCGGCTGA	ATCAGCACGCGGCAGATGTGTTGGGGCATCATCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CATGCGTCGATTTCGTCGTAGCGCAGGCGCACGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	CCTTTGGCTTGCAACACCGGTGTCAGTTCGCGGCT
GTTTCAACACACAGCCGCCCGAAAGCGGCTGA	ATACCCAATGCTCGAGACCATCAAGGCGGAGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGA	TGGCTATCAAAAAAGCACAGGCATTCTGTTTGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTGCCTGACTTCATCGCCTCATGCATCGCGGCAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATCTGTTGCGCCGGGGGACTTGGGGGGATATGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AAACATTGCTGCCCGTTTCTACAAATTCACACAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGCGGAAGAGCGGCGCCCCTTAAATGATTTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGTGTAAATGTCATTTACTTTATCCGTAATAGAG
GTTTCAACACACAGCCGCCCGAAAGCGGCTGC	CAAAAACTCGGCAAAATCATGCACGGCGTAATGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCACCGCGCTCCATCTCCTCTTTATGGGTTTGATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AAATTTGTAAAGGAACTTATCATGAACAAATCAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	ATCAGCAGCGGGCGGATTTTTGGGCGGCCTTGCCG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TAAAGCCCCGCTACAACGCCCAAAATGGCAAGGG
ATTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTGCCGGTAGTAAATAAGCCGACACAGAAATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTCAGATTACCCTGATTTCAGCTTACTTCCAATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGAGTTGCTTAAGGGTAGCGGTAAGATTTAATCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTTTCTTTCAACAGGGCGGTAAATTCGTCTTCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CCGCAGGCATCAACCCGCTTACCCAATTGCATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGCCGCCCGTGTCTTCCGAGCTGCTGGTCACTCAC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGCGCGATTTGTTCAGCGGCTTTATTGCCATTCTCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGCGGCCAAAAACGCATCGGCCTGCGCGCGGGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTTACTTTGGGGGCTGCGTACTTGGTTTTTTGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CACACCCTTTTTCTGCAAAAACTGTACCGTCTCCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTGTTTCGAGCACATCATCATCGCAGGTTTGCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATCTCTGTATAGATATTGTCCTCAGCGTACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGATTGTGAGCAACCAATCAACGGTCAAGACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTAATTAACGCCCAATCCTGCGTTTCCAGCAGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGT	CACGCAGTTTCAGAAAGCTGAACAAAATGAAGAT
GTTTCAACACACAGTCGCCCGAAGGCGGCTGC	TGTGTAGGCTGTATCTCGCACTTATGCGGCTGGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTCCTGTTTAATCGAGTTGCCTGACGCACCACGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GACTATGGCAAATCCAAAAAAAGACACCCTCGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CAAAAACTCAATAGTTCGGGGGAGCGATGAGCTAG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTTGCCGGTTGCCGTGCTGGATGCGTTGGCGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGAAGGTGGCTTGGCCTTTTTAACCGGCTTTATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTGGGGCGCAGGCAGAATGTCCATCGTGTCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGGCGGTAGCAGCTGTATTTTACCCTCTGCCAACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCCTTTGCTTTCGCCGTATTGCTCGCAACAAGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGCAAATTTTCCATACGATATAGCATACTGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTTGACAATTGTCGGCATCACTTTCCTTGAGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TGCCCGCCAAGCTGCAACAAGACCCGACTTGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CGGTTTTTTGACCTTTAAGGGGACTTTGATGGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GAATAATTTCATCGGCAGTTGCCTCAACAATACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CCATGCAGGATCAGGGTGTTCAGGTCGGTATATG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TCTCGCGTACTCTGATTTGGTTTTCGTTCCACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AGCAGCTTGACTATTTGGCCGACCGCAAACTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GAAAGCAGGAATTTAACATACCTTTGCATTACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTGAATCTGATTTATTAGGTTTTCTGATAAAAGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CATCAACATATGCACGATTGATGCGGTTTTGCCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GGTAGCGTAATATTCAAGGCCGTTTTTTTATTGTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TAAACCTGATTAAGTCTGATTTCGGCCACATCGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GCCAGCTTTTCGGCTTGTGTTTGGTTGAATTTCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TTAAACAAGGCCAAGTCGGCATCATTGCTGATAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	AACTTGCTTTGCCGCGCTGTTGACGTATGCTGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GATTAGGCCAAAAAAAATCCGCCCGAAGGCGGAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CATGCCATCTTCTCCGCTACTGCAGACACGCAAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	GTTCATTTCGTAGTCCTTTTTGAGAGGATTTATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	TATTGCGTTCAAGTTTACGCGCTGATTTTAACCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	ATTCAGGCGGGGGAACAGTTCAGATGACCGAATAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC	CTCTTTACCCGCATCGGTACGCGCTTGCAGCGCGAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGC

>NZ_LT906434|3|3|184727-188803|CRT
GTTTCAACACACAGCCGCTCGAAGGCGGCTG	AATCAGCACGCGGCAGATGTGTTGGGGCATCATCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	ACATGCGTCGATTTCGTCGTAGCGCAGGCGCACGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	ACCTTTGGCTTGCAACACCGGTGTCAGTTCGCGGCT
GTTTCAACACACAGCCGCCCGAAAGCGGCTG	AATACCCAATGCTCGAGACCATCAAGGCGGAGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	ATGGCTATCAAAAAAGCACAGGCATTCTGTTTGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTGCCTGACTTCATCGCCTCATGCATCGCGGCAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTATCTGTTGCGCCGGGGGACTTGGGGGGATATGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAAACATTGCTGCCCGTTTCTACAAATTCACACAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCTGCGGAAGAGCGGCGCCCCTTAAATGATTTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAGTGTAAATGTCATTTACTTTATCCGTAATAGAG
GTTTCAACACACAGCCGCCCGAAAGCGGCTG	CCAAAAACTCGGCAAAATCATGCACGGCGTAATGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGCACCGCGCTCCATCTCCTCTTTATGGGTTTGATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAAATTTGTAAAGGAACTTATCATGAACAAATCAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CATCAGCAGCGGGCGGATTTTTGGGCGGCCTTGCCG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTAAAGCCCCGCTACAACGCCCAAAATGGCAAGGG
ATTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTGCCGGTAGTAAATAAGCCGACACAGAAATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTCAGATTACCCTGATTTCAGCTTACTTCCAATA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCGAGTTGCTTAAGGGTAGCGGTAAGATTTAATCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTTTCTTTCAACAGGGCGGTAAATTCGTCTTCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCCGCAGGCATCAACCCGCTTACCCAATTGCATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTGCCGCCCGTGTCTTCCGAGCTGCTGGTCACTCAC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCTGCGCGATTTGTTCAGCGGCTTTATTGCCATTCTCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCGCGGCCAAAAACGCATCGGCCTGCGCGCGGGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTTACTTTGGGGGCTGCGTACTTGGTTTTTTGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCACACCCTTTTTCTGCAAAAACTGTACCGTCTCCA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGTGTTTCGAGCACATCATCATCGCAGGTTTGCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTATCTCTGTATAGATATTGTCCTCAGCGTACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTGATTGTGAGCAACCAATCAACGGTCAAGACAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGTAATTAACGCCCAATCCTGCGTTTCCAGCAGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	TCACGCAGTTTCAGAAAGCTGAACAAAATGAAGAT
GTTTCAACACACAGTCGCCCGAAGGCGGCTG	CTGTGTAGGCTGTATCTCGCACTTATGCGGCTGGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTCCTGTTTAATCGAGTTGCCTGACGCACCACGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGACTATGGCAAATCCAAAAAAAGACACCCTCGTC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCAAAAACTCAATAGTTCGGGGGAGCGATGAGCTAG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGTTGCCGGTTGCCGTGCTGGATGCGTTGGCGCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAGAAGGTGGCTTGGCCTTTTTAACCGGCTTTATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTGGGGCGCAGGCAGAATGTCCATCGTGTCGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTGGCGGTAGCAGCTGTATTTTACCCTCTGCCAACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGCCTTTGCTTTCGCCGTATTGCTCGCAACAAGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCGCAAATTTTCCATACGATATAGCATACTGTCTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTTGACAATTGTCGGCATCACTTTCCTTGAGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTGCCCGCCAAGCTGCAACAAGACCCGACTTGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCGGTTTTTTGACCTTTAAGGGGACTTTGATGGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGAATAATTTCATCGGCAGTTGCCTCAACAATACG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCCATGCAGGATCAGGGTGTTCAGGTCGGTATATG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTCTCGCGTACTCTGATTTGGTTTTCGTTCCACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAGCAGCTTGACTATTTGGCCGACCGCAAACTGGTG
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGAAAGCAGGAATTTAACATACCTTTGCATTACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCTGAATCTGATTTATTAGGTTTTCTGATAAAAGGC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCATCAACATATGCACGATTGATGCGGTTTTGCCC
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGGTAGCGTAATATTCAAGGCCGTTTTTTTATTGTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTAAACCTGATTAAGTCTGATTTCGGCCACATCGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGCCAGCTTTTCGGCTTGTGTTTGGTTGAATTTCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTTAAACAAGGCCAAGTCGGCATCATTGCTGATAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CAACTTGCTTTGCCGCGCTGTTGACGTATGCTGT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGATTAGGCCAAAAAAAATCCGCCCGAAGGCGGAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCATGCCATCTTCTCCGCTACTGCAGACACGCAAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CGTTCATTTCGTAGTCCTTTTTGAGAGGATTTATGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CTATTGCGTTCAAGTTTACGCGCTGATTTTAACCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CATTCAGGCGGGGGAACAGTTCAGATGACCGAATAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTG	CCTCTTTACCCGCATCGGTACGCGCTTGCAGCGCGAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT906434.1\|WP_004284048.1\|190554_191346_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364211.1\|181464_181668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364212.1\|181139_181475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364260.1\|178655_178961_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364208.1\|182698_182812_+\|Com-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226843
NZ_LT906434.1\|WP_085364209.1\|182191_182542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364202.1\|194849_195524_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_LT906434.1\|WP_095197809.1\|198425_200402_-\|DUF3488-domain-containing-transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|378784
NZ_LT906434.1\|WP_050793676.1\|191382_191991_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_LT906434.1\|WP_085364204.1\|189365_190379_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_LT906434.1\|WP_085364206.1\|183759_184590_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223415
NZ_LT906434.1\|WP_085364203.1\|192981_194853_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_LT906434.1\|WP_085364210.1\|181679_182195_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364207.1\|182883_183720_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_LT906434.1\|WP_085364259.1\|179334_180849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364213.1\|180862_181090_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT906434.1\|WP_085364205.1\|188994_189288_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_LT906434.1\|WP_085364201.1\|195648_195879_-\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|378323
NZ_LT906434.1\|WP_004284050.1\|192099_192963_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_LT906434.1\|WP_085364200.1\|195959_198254_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688

Protein	Function_ID	Function_description	E-value
NZ_LT906434.1\|WP_085364204.1\|189365_190379_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_LT906434.1\|WP_050793676.1\|191382_191991_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	8.41695e-41
NZ_LT906434.1\|WP_085364200.1\|195959_198254_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.78152e-59
NZ_LT906434.1\|WP_085364202.1\|194849_195524_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.22896e-110
NZ_LT906434.1\|WP_085364201.1\|195648_195879_-\|DUF2188-domain-containing-protein	gnl\|CDD\|378323	pfam09954, DUF2188, Uncharacterized protein conserved in bacteria (DUF2188). This domain, found in various hypothetical bacterial proteins, has no known function.	5.62353e-19
NZ_LT906434.1\|WP_085364206.1\|183759_184590_+\|hypothetical-protein	gnl\|CDD\|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	6.46384e-05
NZ_LT906434.1\|WP_085364203.1\|192981_194853_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_LT906434.1\|WP_085364207.1\|182883_183720_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	2.60258e-59
NZ_LT906434.1\|WP_085364205.1\|188994_189288_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.56109e-31
NZ_LT906434.1\|WP_095197809.1\|198425_200402_-\|DUF3488-domain-containing-transglutaminase-family-protein	gnl\|CDD\|378784	pfam11992, DUF3488, Domain of unknown function (DUF3488). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 323 to 339 amino acids in length. This domain is found associated with pfam01841. This domain has a conserved PLW sequence motif. This domain contains 6 transmembrane helices.	7.65206e-66
NZ_LT906434.1\|WP_004284050.1\|192099_192963_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.30705e-152
NZ_LT906434.1\|WP_085364208.1\|182698_182812_+\|Com-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|226843	COG4416, Com, Mu-like prophage protein Com [General function prediction only].	6.14715e-05

>NZ_LT906434.1|WP_085364206.1|183759_184590_+|hypothetical-protein
MTHYTKAPLPFVGQKRNFIKQFKQVLNHIPADGAGWTIVDAFGGSGLLAHVAKHVKPSARVIYNDFDGYADRLRHIPDTNRLRKKLAELLASYPRDKHIDKATKSKVVDVIESFDGYKDLGCLRSWLLFSSNQAGTMAEFLSKNMYNCIRQTDYPDAEYYLKGLEIVSQPFQTLLPQYTSQPDTLLVLDPPYVSTLQGMYANQNYFGMVEFLRLIHMVRPPFVFFSSTRSEFMDYLDFIKECRPDDWAVFDGMEHVSYTASVSTRAKYVDNMVFKF
>NZ_LT906434.1|WP_085364207.1|182883_183720_+|DNA-(cytosine-5-)-methyltransferase
MDAQAPSRPTVGSLFAGIGGFDLGFEQAGFTTAWQVEISDVPRAVLADRFPHAKQFTDVRTCLPDLWHTDVIIGGFPCQDVSTAGKRRGLAGERTGLFFDALNIVNTLKPRWVVLENVTGLLNSNDGKDFQTVIQSLAECGYVGCWRVLDARYFGVPTKRRRVFVVAGLGEQPPIEFMVDAGPTDRLAGKAAAGGPWADAHPTLLAGFPSGTNIDISGANICLVADGRSKMVERGRTVTDNGLRKGLDASNFAEARAAGNAVCPQVARWVAEKLIKTF
>NZ_LT906434.1|WP_085364208.1|182698_182812_+|Com-family-DNA-binding-transcriptional-regulator
MVNYRELRCARCLKLLAKGSGSVQIKCNRCKTINTFN
>NZ_LT906434.1|WP_085364209.1|182191_182542_+|hypothetical-protein
MTLKQQIERLCDRIADEFEKLKQNSAVPPYQEFQEGYYTRQQLEQFNGGKPLANSRFVTCPWPRAFKERPCVQITLDIVSAAARVHYIQNVTETGFDVATNYAPDLRGVWFRAYVK
>NZ_LT906434.1|WP_085364210.1|181679_182195_+|hypothetical-protein
MKLSERINQFIDKVGEVLKGIKGDIGHKSALQTEHKDSLVGAVNELKTRMDNAASGGNAAINDNAPASESTVYSSQKTQQLIDAAKNDVKQEVKTEILDGAEEAYDTLKEVGNYIKEDKSGAAAMAEQIGKRLRIDESQVLSPDQKAAVEATLNLGDTDTDFVARFEQALQ
>NZ_LT906434.1|WP_085364211.1|181464_181668_+|hypothetical-protein
MLVNFRVYRGNIAHAERRFDDDLYKVWLAQPENQGKTFDDFTAWLQSFRPSEEEAPDFVARLILAMS
>NZ_LT906434.1|WP_085364212.1|181139_181475_+|hypothetical-protein
MNKPLTFKRGETVEITLLFDILDDYGISALYGVNTLARIRPKFGNDAAAAFAVDVFPEQNRLLLALTAEQSAGLREGSYIADVAFTRLSDGLVQMSGDIAVEIIKGTSHVG
>NZ_LT906434.1|WP_085364213.1|180862_181090_+|hypothetical-protein
MNLFAQFNAIFNREQRGIAKITGDLGGGSFAARAHGGGNIVLSGQAANGQSVFYDKRTNKIIGQAPDLQITDIPV
>NZ_LT906434.1|WP_085364259.1|179334_180849_+|hypothetical-protein
MAALKRKQKSVYTPAVLYAGEAAANISGMADLRRETRANMSGGASLARCGRQPSGVAAALRKCGLHEFRPSESKVFALDAYVSARTPTAACRKSASLPALPVPCEWYEIPAEPMPPQPPDNTYVCGLRPPPDKMPLRFRRRVIGHSSGSIPIPFTCHQELKTPVLKAYMIVNTVSASFDDTPLTLLSASFTADMGGYCWQGTVTVPPDDFARLGMDGRAKGREAVITININGGLFVILAEEYRDNRAFGQKSYTVSGRSVTARLGESYAVQAGGVFDAPIYARQIADTQLKNTGIRLTDWRAADWLIPAGIYASTDKTPMAVLQELAQAAGAFVESHPGNAEINVKTRWKKPAWEVSAASPDVSVPASVILSISGSRSVKPLAGGVFVYADHAKGKGADVYRKAGNREPRAAAVTGPLYTDMPVLQAAGVAALSDTGTHKSETVTLPVSDKYALPLAQLGQIWQIQEPAGAWQGVVTGVTLAVDIENEAPRVLQTVVINRYLDN
>NZ_LT906434.1|WP_085364260.1|178655_178961_+|hypothetical-protein
MFGAVKSRAGNHYGRTHGGGFIAGRGDGILTVGGQPAERRILLFERGTFKLVRGAWSRPDGTYLLDRINPDRDYLVLALDHKRQYEPVAYDFVRPAVPESG
>NZ_LT906434.1|WP_085364205.1|188994_189288_-|CRISPR-associated-endonuclease-Cas2
MLMLITYDISLEDAEGQARLRRIAKHCLDYGVRVQYSVFECDVTPDQWVKLKAKLLDTYQPETDSLRFYHLGSKWRRKVEHHGAKAAVDVFQDTLIV
>NZ_LT906434.1|WP_085364204.1|189365_190379_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLQNTLYITTQGSYLHKERETLVVEQERKKVAQLPVHAIGHIFCFGNVLVSPFLMGFCGENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRQSEQNPVPIARHIIAAKIQSAKRVLQRRLRNHGEHAEVLAAVTALNFSLQQLKRAECLDKVRGIEGDAAARYFGVFRHLLAEKSGFDFDGRNRRPPRDGVNALLSFLYAVLGKDISGALQGVGLDPQVGFLHADRPGRDSLAQDILEEFRAWWVDRLVLSLINRGQIKPQDFVHEASGAVNIKPEARKLLFQTLQSKKQEKIMHPFLQEEVEIGLLPYIQAMLLARHLRGDLAEYPPFLMR
>NZ_LT906434.1|WP_004284048.1|190554_191346_-|hypothetical-protein
MNKKPINLWLEKLSLWGIVALLVMSIIVPLLFQENNMWTSLSSNIGIALFSALSISKFLQKETKDFIFNEIPLLQKANEVGIASILENGSIESLDFKESKVFIIAMNDGKFFITQNAENLCNRFEKEGMTTTFILLDGESDAAKLLCHANGKDDINSYKNKIDQAVKEIKNFSDRYSKHNFEIYMYSKGYFRSSIILTDSKALVGLYRNSPGKGKIPLHILISKSGSEFDAIKNDVMQLKSLSRPVQVVETINIAQQNADILS
>NZ_LT906434.1|WP_050793676.1|191382_191991_-|CRISPR-associated-protein-Cas4
MISIPLSALQHYAFCPRQCALIHNEQVWAENYLTAQGSALHERVDGGEPETRKGVRFERSVHVSAEKLGVHGVLDMVERDIQTGRLKPVEYKRGKPKPEPFDEIQLCAQALCLEEMTGQTVAEGALWYMQTRHRVPVVFSDGLRAETLDVIRNVRELLDSGTTPPPEYGKRCKACSLIEVCQPKLVEKDRSVGYVAGLFRVE
>NZ_LT906434.1|WP_004284050.1|192099_192963_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPESSKGLVTDVCLKRKIRNFVELANENQAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKDEAKARDITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSVDPIVPLEVSITRMAVTNEKDLEKERTMGRKYIVPYALYRVHGFVSANLAAKTGFSDEDLQQLWNALRLMFEHDRSAARGEMAARKLIVFKHDSALGNEPAHKLFEAVKVERIHGESGTPAAAFSDYRISVHSDGLKGVTVEELL
>NZ_LT906434.1|WP_085364203.1|192981_194853_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILTALARYYRRLAAENDVAGNPKVPPYGFSEEKIGWVLVLDADGLLVDVVQHFTTEGKKPQPRLMSVPKTGGSNSNSIKPNFLWGNTQYILGVTKKETKDKDRTNRCFSSFREYHFRLLEKEQDKGLLALSRFLERWQPEQFAHPPCLPDMLDANVVFKLDGAHGYIHQCEAAQSLWVNHLQSDEAEQGLCLVSGEQAPIARTHPVIKGVEGGEKSGGMIISFNKESFTSFGKEQGANAPVSEVSAFAYTTALNYLLRRENGHCLTIGDASTVFWAEAATPEQAEAAEGFFAAAMTPPDDEQENQKIFDVLAQVVKGRPLREIDPNLDDQTRFYILGLAPNASRISIRFWLDTTFGKLAENIKKHRDDLSINPPVWGAKPPSVWRILLETTPKRKGADGRLKKSESKDIPPQLAGEYMRAILTGRHYPQTMLSRMIGRIRSDGFISGLRVAVIKSVLKRNNLCKEEFDMGLNEETQDIPYRLGRLFAIIELAQSSALGELNAGVRDKFYGGASSSPHSTFPLLLDNYRTHISGLRKGKKAKWVTGDSKKLANWLENKVGEIVSVFDAETPFPRHLSLEEQGRFVIGYYQQRFKKYSKQEGGDVPEDIELANHLKTESDSEDE
>NZ_LT906434.1|WP_085364202.1|194849_195524_-|type-I-C-CRISPR-associated-protein-Cas5
MENKVRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVHWKPAIRWVVDRIHVLKPIRFESVRRNELGSKILASKVSGAMRRKRVEDLYALIEDDRQQRAATVLKDVGYVIEAHAVLTPQAGEGETVAKHIEMFKRRAAKGQCFQQPCMGVREFPAHFAWVDEDSLTESELPENERDRDLGWMLHDIDFDGSNLPHFFRAEMKNGVVEVPPFFAEEVKK
>NZ_LT906434.1|WP_085364201.1|195648_195879_-|DUF2188-domain-containing-protein
MSKKNQHVVPHSDGWAVKGAGNSKATAVYGTQKEAIIRAQEIAKNQRADTKIHGMDGRIRAGNSYGNDPCPPRDKK
>NZ_LT906434.1|WP_085364200.1|195959_198254_-|CRISPR-associated-helicase/endonuclease-Cas3
MSVDHQTIRIYYAHSAENQPYEYWQTMRSHAHNVGEAAARFAAFFGAEEMARYTGQLHDLGKYTPEFNRRLHGGPSVDHATAGAKIAFERWGLQGKLMAFCIAGHHAGLANGNSEGDNRRTLTQRLAVPFGKGIHDIPEPDEVWQQDISLPQTLPASPLQADKHHPFFSYAFFTRMLYSCLVDADYLDTEAFYAGLEDKTVQRGGHPDLLQLQQRFNRFIGDFRRRIAEKPQQTEEDKRNAALNRLRSDILDHAVSQAEQAPGLFTLTVPTGGGKTFTSMAFALEHAKRHGMRRVIYVIPFTSIIEQNAAEFRKAFGDLGKDAVLEHHSTFDDSKLKDQHSKDKLRQASENWDMPVVVTTAVQFFESLFADRSSRCRKLHNISGSVIILDEAQMLPLKLLLPIMQAVKELARNYHCSVVMCTATQPAIQAEHGFYRGLENTRELAPNPPELFDKLRRTTVQHIGIQTDADLLEKLAQHKQILIIVNNRRHARSLYDSAKQLDGVFHLTTLMCAKHRSQVLETIRGRLKNGQPCRVIASSLVEAGVDVDFPLVMRAEAGLDSVAQAAGRCNREGKRPSENSFVWVFKPEEQWKAPSELGLLSAAMREVVRHHADDLLSPQAIRRYFQRVYEEKGKELDSKGILEMHKKAGNSLNFPFQTIAQKFRMIESHMQPLIIPFDQEAERLIDSLRHADQIGRLLRKLQPYTVQVPERAMQALFKDGRIEAINDERFGKQFYRLIGLGLYDKVAGLSWENSIFIAAERSVI
>NZ_LT906434.1|WP_095197809.1|198425_200402_-|DUF3488-domain-containing-transglutaminase-family-protein
MLILNPAFLQQPPPRAVASAVLFTLLWAALPLVSSLPAAVVAVFGGMWLLRLVLLRLGVAKLPLPALVLLMVIGCALVWQQLGTVIGRDGGGSFLLLMVMLKAFEGNTRRDWQVLLLAMLFLIGSSVLFDQSLIIGIWLLLALPMAGICFAVLCGLSVKEAAKHTGQALLLTLPLTAVLFVAVPRLNEPLWRIPQPQQGQAKTGLSDSMEPGSISNLVQSDEWVANITFSDGIKPQRSDMYWRAIIMADFDGVRWRALDNTYIDEARSVANPARTVEYQMIIRDQNGALPALDYPVGQLHGSLTKRMGQIVRAHRSREGLRRITLQASLSDTLPHALSRNEHDFYTRLPEGNLQTRLLADTLAKQSANERQFIDKVLHHYRSKKFGYTLQPPRTPGRNGIDEFMFRTHQGFCEHYAQSFVVMMRAVGLPARVVTGYQGAEYNEQAGFWQIRSKDAHAWAEVWLPQEQAWLRVDPTAAVSSVRAESGISQALPEAERNMVSDGHSLFARWRDTGQFYWQQWVVNYDQSKQNNLFELLGLGGFNWKTLLLVLPAGMALALLPLLKWWFGNRNRERDYLNEGFAQLKTALLGEEDETAPAVSAGELQKLLNSNGIESPELIRLLKQYEHWLYAADRPTLRTQKRWYRAVRKIVKKHYRRQH

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_LT906434_3	3.29\|186622\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186622-186654	33	NZ_LT906434.1	839738-839770	1.0
NZ_LT906434_3	3.30\|186687\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186687-186720	34	NZ_LT906434.1	642089-642122	1.0
NZ_LT906434_3	3.42\|187479\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187479-187511	33	NZ_LT906434.1	1117541-1117573	1.0
NZ_LT906434_3	3.91\|186686\|35\|NZ_LT906434\|CRT	186686-186720	35	NZ_LT906434.1	642088-642122	1.0

1. spacer 3.29|186622|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to position: 839738-839770, mismatch: 0, identity: 1.0

gtaattaacgcccaatcctgcgtttccagcagt	CRISPR spacer
gtaattaacgcccaatcctgcgtttccagcagt	Protospacer
*********************************

2. spacer 3.30|186687|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to position: 642089-642122, mismatch: 0, identity: 1.0

cacgcagtttcagaaagctgaacaaaatgaagat	CRISPR spacer
cacgcagtttcagaaagctgaacaaaatgaagat	Protospacer
**********************************

3. spacer 3.42|187479|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to position: 1117541-1117573, mismatch: 0, identity: 1.0

tgcccgccaagctgcaacaagacccgacttggc	CRISPR spacer
tgcccgccaagctgcaacaagacccgacttggc	Protospacer
*********************************

4. spacer 3.91|186686|35|NZ_LT906434|CRT matches to position: 642088-642122, mismatch: 0, identity: 1.0

tcacgcagtttcagaaagctgaacaaaatgaagat	CRISPR spacer
tcacgcagtttcagaaagctgaacaaaatgaagat	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT591906	Neisseria gonorrhoeae strain WHO M plasmid 3, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT591899	Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence	13687-13721	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT592164	Neisseria gonorrhoeae strain WHO_W plasmid 2, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_AP018378	Neisseria gonorrhoeae strain FC428 plasmid pConjugative, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP043872	Neisseria gonorrhoeae strain NG196 plasmid p1, complete sequence	38147-38181	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	CP002441	Neisseria gonorrhoeae TCDC-NG08107 plasmid pNGTCDC08107, complete sequence	18296-18330	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NC_014105	Neisseria gonorrhoeae plasmid pEP5289, complete sequence	13687-13721	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT592148	Neisseria gonorrhoeae strain WHO O plasmid 3, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT591912	Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence	13687-13721	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_LT591902	Neisseria gonorrhoeae strain WHO L plasmid 2, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP045833	Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence	26463-26497	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP020416	Neisseria gonorrhoeae strain FDAARGOS_205 plasmid unnamed1, complete sequence	27214-27248	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP034033	Neisseria gonorrhoeae strain FQ01 plasmid unnamed1, complete sequence	10737-10771	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP043813	Neisseria gonorrhoeae strain NG290 plasmid p1, complete sequence	36500-36534	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_CP043817	Neisseria gonorrhoeae strain NG251 plasmid p1, complete sequence	7252-7286	2	0.943
NZ_LT906434_3	3.25\|186357\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186357-186391	35	NZ_AP019854	Neisseria gonorrhoeae strain SS3160 plasmid pConjugative, complete sequence	11712-11746	2	0.943
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT591906	Neisseria gonorrhoeae strain WHO M plasmid 3, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT591899	Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence	13687-13722	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT592164	Neisseria gonorrhoeae strain WHO_W plasmid 2, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_AP018378	Neisseria gonorrhoeae strain FC428 plasmid pConjugative, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP043872	Neisseria gonorrhoeae strain NG196 plasmid p1, complete sequence	38147-38182	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	CP002441	Neisseria gonorrhoeae TCDC-NG08107 plasmid pNGTCDC08107, complete sequence	18296-18331	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NC_014105	Neisseria gonorrhoeae plasmid pEP5289, complete sequence	13687-13722	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT592148	Neisseria gonorrhoeae strain WHO O plasmid 3, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT591912	Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence	13687-13722	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_LT591902	Neisseria gonorrhoeae strain WHO L plasmid 2, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP045833	Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence	26463-26498	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP020416	Neisseria gonorrhoeae strain FDAARGOS_205 plasmid unnamed1, complete sequence	27214-27249	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP034033	Neisseria gonorrhoeae strain FQ01 plasmid unnamed1, complete sequence	10737-10772	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP043813	Neisseria gonorrhoeae strain NG290 plasmid p1, complete sequence	36499-36534	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_CP043817	Neisseria gonorrhoeae strain NG251 plasmid p1, complete sequence	7251-7286	2	0.944
NZ_LT906434_3	3.86\|186356\|36\|NZ_LT906434\|CRT	186356-186391	36	NZ_AP019854	Neisseria gonorrhoeae strain SS3160 plasmid pConjugative, complete sequence	11711-11746	2	0.944
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MG250483	Aeromonas phage Ah1, complete genome	186884-186917	6	0.824
NZ_LT906434_1	1.13\|137502\|34\|NZ_LT906434\|CRT,CRISPRCasFinder,PILER-CR	137502-137535	34	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	209671-209704	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	AY266303	Bacteriophage Aeh1, complete genome	53422-53455	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	AY266303	Bacteriophage Aeh1, complete genome	200918-200951	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_005260	Aeromonas phage Aeh1, complete genome	53422-53455	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_005260	Aeromonas phage Aeh1, complete genome	200918-200951	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MG250483	Aeromonas phage Ah1, complete genome	43791-43824	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MN103401	Bordetella phage vB_BbrS_PHB09, complete genome	8115-8148	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_047959	Enterobacteria phage vB_EcoS_IME18, complete genome	30104-30137	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	HM452126	Aeromonas phage phiAS5, complete genome	126619-126652	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_011142	Iodobacteriophage phiPLPE, complete genome	22347-22380	7	0.794
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MF417892	Uncultured Caudovirales phage clone 2F_2, partial genome	25249-25282	7	0.794
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	MG250483	Aeromonas phage Ah1, complete genome	186883-186917	7	0.8
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NZ_CP029211	Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence	251385-251419	7	0.8
NZ_LT906434_3	3.13\|185558\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	185558-185591	34	NZ_LR134433	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24	132418-132451	8	0.765
NZ_LT906434_3	3.29\|186622\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	186622-186654	33	MN908685	Microbacterium phage PauloDiaboli, complete genome	176428-176460	8	0.758
NZ_LT906434_3	3.42\|187479\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187479-187511	33	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	854655-854687	8	0.758
NZ_LT906434_3	3.42\|187479\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187479-187511	33	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	633455-633487	8	0.758
NZ_LT906434_3	3.42\|187479\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187479-187511	33	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	854655-854687	8	0.758
NZ_LT906434_3	3.42\|187479\|33\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187479-187511	33	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	841620-841652	8	0.758
NZ_LT906434_3	3.51\|188073\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188073-188107	35	NZ_CP048323	Escherichia coli strain 64 plasmid p64-A, complete sequence	7185-7219	8	0.771
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MH791401	UNVERIFIED: Aeromonas phage AsFcp_2, complete genome	101979-102012	8	0.765
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NZ_CP034939	Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence	32808-32841	8	0.765
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NZ_CP029211	Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence	251385-251418	8	0.765
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_025430	Escherichia phage vB_EcoM-ep3, complete genome	12755-12788	8	0.765
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	AY266303	Bacteriophage Aeh1, complete genome	53421-53455	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	AY266303	Bacteriophage Aeh1, complete genome	200917-200951	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_005260	Aeromonas phage Aeh1, complete genome	53421-53455	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_005260	Aeromonas phage Aeh1, complete genome	200917-200951	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	MG250483	Aeromonas phage Ah1, complete genome	43790-43824	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	MN103401	Bordetella phage vB_BbrS_PHB09, complete genome	8114-8148	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_047959	Enterobacteria phage vB_EcoS_IME18, complete genome	30104-30138	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	HM452126	Aeromonas phage phiAS5, complete genome	126618-126652	8	0.771
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	MF417892	Uncultured Caudovirales phage clone 2F_2, partial genome	25248-25282	8	0.771
NZ_LT906434_1	1.2\|136786\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136786-136819	34	MH015259	Ruegeria phage vB_RpoP-V17, complete genome	69259-69292	9	0.735
NZ_LT906434_1	1.2\|136786\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136786-136819	34	NC_049435	Ruegeria phage vB_RpoP-V12, complete genome	69269-69302	9	0.735
NZ_LT906434_1	1.2\|136786\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136786-136819	34	MH015253	Ruegeria phage vB_RpoP-V21, complete genome	69259-69292	9	0.735
NZ_LT906434_1	1.2\|136786\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136786-136819	34	FJ591093	Roseophage DSS3P2, complete genome	69340-69373	9	0.735
NZ_LT906434_1	1.2\|136786\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136786-136819	34	MH015257	Ruegeria phage vB_RpoP-V14, complete genome	69367-69400	9	0.735
NZ_LT906434_1	1.13\|137502\|34\|NZ_LT906434\|CRT,CRISPRCasFinder,PILER-CR	137502-137535	34	KF302035	UNVERIFIED: Pseudoalteromonas phage HS6, complete genome	14696-14729	9	0.735
NZ_LT906434_3	3.35\|187020\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187020-187053	34	NZ_AF135182	Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence	128365-128398	9	0.735
NZ_LT906434_3	3.35\|187020\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187020-187053	34	NC_002523	Serratia entomophila plasmid pADAP, complete sequence	127927-127960	9	0.735
NZ_LT906434_3	3.35\|187020\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187020-187053	34	NZ_CP041127	Serratia marcescens strain WVU-005 plasmid pWVU-005-1, complete sequence	76874-76907	9	0.735
NZ_LT906434_3	3.51\|188073\|35\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188073-188107	35	NZ_CP029726	Proteus mirabilis strain AR_0029 plasmid unnamed, complete sequence	6268-6302	9	0.743
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MN871440	UNVERIFIED: Aeromonas phage AsFcp_1, complete genome	106116-106149	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MH791407	UNVERIFIED: Aeromonas phage AsFcp_4, partial genome	57596-57629	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	AF447491	Bacteriophage phiE125, complete genome	4730-4763	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_041926	Escherichia phage vB_EcoM_ECOO78, complete genome	2646-2679	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_003309	Burkholderia phage phiE125, complete genome	4730-4763	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NZ_CP045368	Marinobacter sp. THAF39 plasmid phiTHAF39, complete sequence	20181-20214	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	109086-109119	9	0.735
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	JX403940	Acinetobacter phage YMC/09/02/B1251_ABA_BP, complete genome	39053-39086	9	0.735
NZ_LT906434_3	3.65\|184958\|35\|NZ_LT906434\|CRT	184958-184992	35	NC_015065	Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence	274110-274144	9	0.743
NZ_LT906434_3	3.90\|186621\|34\|NZ_LT906434\|CRT	186621-186654	34	MN908685	Microbacterium phage PauloDiaboli, complete genome	176428-176461	9	0.735
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	MH791401	UNVERIFIED: Aeromonas phage AsFcp_2, complete genome	101978-102012	9	0.743
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	AF447491	Bacteriophage phiE125, complete genome	4730-4764	9	0.743
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_003309	Burkholderia phage phiE125, complete genome	4730-4764	9	0.743
NZ_LT906434_3	3.4\|184959\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	184959-184992	34	NC_015065	Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence	274111-274144	10	0.706
NZ_LT906434_3	3.37\|187152\|32\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187152-187183	32	MH179480	Pseudomonas phage 98PfluR60PP, complete genome	5494-5525	10	0.688
NZ_LT906434_3	3.37\|187152\|32\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187152-187183	32	NC_048697	Pseudomonas phage Littlefix, complete genome	54006-54037	10	0.688
NZ_LT906434_3	3.44\|187609\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	187609-187642	34	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	414181-414214	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_009235	Burkholderia phage phi644-2 chromosome, complete genome	4722-4755	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	CP000625	Burkholderia phage phi644-2, complete genome	4722-4755	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NZ_CP042265	Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence	61151-61184	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MN013077	Klebsiella phage vB_KaeM_KaOmega, complete genome	100448-100481	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MF979563	Pectobacterium phage DU_PP_IV, complete genome	92147-92180	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_048067	Escherichia phage C130_2, complete genome	10703-10736	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	MF979560	Pectobacterium phage DU_PP_I, complete genome	91837-91870	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	KC954774	Cronobacter phage CR8, complete genome	100137-100170	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_028672	Cronobacter phage PBES 02, complete genome	5607-5640	10	0.706
NZ_LT906434_3	3.56\|188405\|34\|NZ_LT906434\|PILER-CR,CRISPRCasFinder	188405-188438	34	NC_017974	Cronobacter phage CR3, complete genome	99362-99395	10	0.706
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_041926	Escherichia phage vB_EcoM_ECOO78, complete genome	2645-2679	10	0.714
NZ_LT906434_1	1.4\|136916\|34\|NZ_LT906434\|CRT,CRISPRCasFinder	136916-136949	34	MK448879	Streptococcus phage Javan226, complete genome	6509-6542	11	0.676
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	NC_009235	Burkholderia phage phi644-2 chromosome, complete genome	4722-4756	11	0.686
NZ_LT906434_3	3.117\|188404\|35\|NZ_LT906434\|CRT	188404-188438	35	CP000625	Burkholderia phage phi644-2, complete genome	4722-4756	11	0.686

1. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT591906 (Neisseria gonorrhoeae strain WHO M plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

2. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT591899 (Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

3. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT592164 (Neisseria gonorrhoeae strain WHO_W plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

4. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_AP018378 (Neisseria gonorrhoeae strain FC428 plasmid pConjugative, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

5. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP043872 (Neisseria gonorrhoeae strain NG196 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

6. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to CP002441 (Neisseria gonorrhoeae TCDC-NG08107 plasmid pNGTCDC08107, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

7. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_014105 (Neisseria gonorrhoeae plasmid pEP5289, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

8. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT592148 (Neisseria gonorrhoeae strain WHO O plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

9. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT591912 (Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

10. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LT591902 (Neisseria gonorrhoeae strain WHO L plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

11. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP045833 (Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

12. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP020416 (Neisseria gonorrhoeae strain FDAARGOS_205 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

13. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP034033 (Neisseria gonorrhoeae strain FQ01 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

14. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP043813 (Neisseria gonorrhoeae strain NG290 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

15. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP043817 (Neisseria gonorrhoeae strain NG251 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

16. spacer 3.25|186357|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_AP019854 (Neisseria gonorrhoeae strain SS3160 plasmid pConjugative, complete sequence) position: , mismatch: 2, identity: 0.943

cacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
cacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
***.********************.**********

17. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT591906 (Neisseria gonorrhoeae strain WHO M plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

18. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT591899 (Neisseria gonorrhoeae strain WHO G plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

19. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT592164 (Neisseria gonorrhoeae strain WHO_W plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

20. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_AP018378 (Neisseria gonorrhoeae strain FC428 plasmid pConjugative, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

21. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP043872 (Neisseria gonorrhoeae strain NG196 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

22. spacer 3.86|186356|36|NZ_LT906434|CRT matches to CP002441 (Neisseria gonorrhoeae TCDC-NG08107 plasmid pNGTCDC08107, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

23. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NC_014105 (Neisseria gonorrhoeae plasmid pEP5289, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

24. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT592148 (Neisseria gonorrhoeae strain WHO O plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

25. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT591912 (Neisseria gonorrhoeae strain WHO N plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

26. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_LT591902 (Neisseria gonorrhoeae strain WHO L plasmid 2, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

27. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP045833 (Neisseria gonorrhoeae strain AUSMDU00010541 plasmid pAUSMDU00010541_01, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

28. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP020416 (Neisseria gonorrhoeae strain FDAARGOS_205 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

29. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP034033 (Neisseria gonorrhoeae strain FQ01 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

30. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP043813 (Neisseria gonorrhoeae strain NG290 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

31. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_CP043817 (Neisseria gonorrhoeae strain NG251 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

32. spacer 3.86|186356|36|NZ_LT906434|CRT matches to NZ_AP019854 (Neisseria gonorrhoeae strain SS3160 plasmid pConjugative, complete sequence) position: , mismatch: 2, identity: 0.944

ccacaccctttttctgcaaaaactgtaccgtctcca	CRISPR spacer
ccacgccctttttctgcaaaaactgcaccgtctcca	Protospacer
****.********************.**********

33. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 6, identity: 0.824

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gctttttccaaaaaaaatccacccgaaggtggat	Protospacer
* **   *************.********.****

34. spacer 1.13|137502|34|NZ_LT906434|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 7, identity: 0.794

gtggtcgattacgagcaccaaaccctgcacaaag	CRISPR spacer
ccggtcgattacgagcaccagaccctgcgcgcgg	Protospacer
 .******************.*******.*. .*

35. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to AY266303 (Bacteriophage Aeh1, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ttttttggaaataaaaatccgcccgaaggcggat	Protospacer
  **  *  ** **********************

36. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to AY266303 (Bacteriophage Aeh1, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gctttttctaaaaaaaatccacccgaaggtggat	Protospacer
* **   *.***********.********.****

37. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_005260 (Aeromonas phage Aeh1, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ttttttggaaataaaaatccgcccgaaggcggat	Protospacer
  **  *  ** **********************

38. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_005260 (Aeromonas phage Aeh1, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gctttttctaaaaaaaatccacccgaaggtggat	Protospacer
* **   *.***********.********.****

39. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctttttggaaataaaaatccgcccgaaggcggat	Protospacer
  **  *  ** **********************

40. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MN103401 (Bordetella phage vB_BbrS_PHB09, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ttgtgggcgaaaaaaaaaccgcccgaaggcggtt	Protospacer
   *.*** ******** ************** *

41. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_047959 (Enterobacteria phage vB_EcoS_IME18, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gcaatggccaacaaaaaaccgcccgaaggcggtt	Protospacer
*    ****** ***** ************** *

42. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctttttgaaaataaaaatccgcccgaaggcggat	Protospacer
  **  *  ** **********************

43. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_011142 (Iodobacteriophage phiPLPE, complete genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gaagagtgcaaagaaaaaccgcccgaaggcggtt	Protospacer
**  **  ****.**** ************** *

44. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 7, identity: 0.794

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gttttctccaataaaaaaccgcccgaaggcggct	Protospacer
* **   **** ***** ************** *

45. spacer 3.117|188404|35|NZ_LT906434|CRT matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 7, identity: 0.8

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
agctttttccaaaaaaaatccacccgaaggtggat	Protospacer
 * **   *************.********.****

46. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 7, identity: 0.8

-cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
acaact-gcccacaaaaaagccgcccgaaggcggct	Protospacer
 *.*.* * *** ****** ************** *

47. spacer 3.13|185558|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_LR134433 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 24) position: , mismatch: 8, identity: 0.765

aaatttgtaaaggaacttatcatgaacaaatcaa	CRISPR spacer
caatgactataggaacttatcaagaacaaattga	Protospacer
 ***   ** ************ ********..*

48. spacer 3.29|186622|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MN908685 (Microbacterium phage PauloDiaboli, complete genome) position: , mismatch: 8, identity: 0.758

gtaattaacgcccaatcctgcgtttccagcagt	CRISPR spacer
gacacccacgcctcatcctgcgtttccagcagc	Protospacer
*  *.. *****. ******************.

49. spacer 3.42|187479|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 8, identity: 0.758

tgcccgccaagctgcaacaagacccgacttggc	CRISPR spacer
ttcccgccaagctccaacgagacccgtttgatc	Protospacer
* *********** ****.******* .* . *

50. spacer 3.42|187479|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 8, identity: 0.758

tgcccgccaagctgcaacaagacccgacttggc	CRISPR spacer
ttcccgccaagctccaacgagacccgtttgatc	Protospacer
* *********** ****.******* .* . *

51. spacer 3.42|187479|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 8, identity: 0.758

tgcccgccaagctgcaacaagacccgacttggc	CRISPR spacer
ttcccgccaagctccaacgagacccgtttgatc	Protospacer
* *********** ****.******* .* . *

52. spacer 3.42|187479|33|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.758

tgcccgccaagctgcaacaagacccgacttggc	CRISPR spacer
ttcccgccaagctccaacgagacccgtttgatc	Protospacer
* *********** ****.******* .* . *

53. spacer 3.51|188073|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP048323 (Escherichia coli strain 64 plasmid p64-A, complete sequence) position: , mismatch: 8, identity: 0.771

ggtagcgtaatattcaaggccgtttttttattgtt	CRISPR spacer
gaaaacggcgtattcagcgccgtttttttattgtt	Protospacer
*. *.**  .******. *****************

54. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MH791401 (UNVERIFIED: Aeromonas phage AsFcp_2, complete genome) position: , mismatch: 8, identity: 0.765

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
aaaaagaagaaaaaaaatccacccgaaggtggat	Protospacer
.*  **.  ***********.********.****

55. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP034939 (Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence) position: , mismatch: 8, identity: 0.765

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gggaacagcaaaaaaaaaccgcccgaaggcggct	Protospacer
*.  * . ********* ************** *

56. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 8, identity: 0.765

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
caactgcccacaaaaaagccgcccgaaggcggct	Protospacer
 * . * *** ****** ************** *

57. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_025430 (Escherichia phage vB_EcoM-ep3, complete genome) position: , mismatch: 8, identity: 0.765

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
cttttgcgcaataaaaaaccgcccgaaggcggtt	Protospacer
  ** *  *** ***** ************** *

58. spacer 3.117|188404|35|NZ_LT906434|CRT matches to AY266303 (Bacteriophage Aeh1, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attttttggaaataaaaatccgcccgaaggcggat	Protospacer
   **  *  ** **********************

59. spacer 3.117|188404|35|NZ_LT906434|CRT matches to AY266303 (Bacteriophage Aeh1, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
agctttttctaaaaaaaatccacccgaaggtggat	Protospacer
 * **   *.***********.********.****

60. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_005260 (Aeromonas phage Aeh1, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attttttggaaataaaaatccgcccgaaggcggat	Protospacer
   **  *  ** **********************

61. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_005260 (Aeromonas phage Aeh1, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
agctttttctaaaaaaaatccacccgaaggtggat	Protospacer
 * **   *.***********.********.****

62. spacer 3.117|188404|35|NZ_LT906434|CRT matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
actttttggaaataaaaatccgcccgaaggcggat	Protospacer
   **  *  ** **********************

63. spacer 3.117|188404|35|NZ_LT906434|CRT matches to MN103401 (Bordetella phage vB_BbrS_PHB09, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
gttgtgggcgaaaaaaaaaccgcccgaaggcggtt	Protospacer
    *.*** ******** ************** *

64. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_047959 (Enterobacteria phage vB_EcoS_IME18, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tgcaatggccaacaaaaaaccgcccgaaggcggtt	Protospacer
.*    ****** ***** ************** *

65. spacer 3.117|188404|35|NZ_LT906434|CRT matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
actttttgaaaataaaaatccgcccgaaggcggat	Protospacer
   **  *  ** **********************

66. spacer 3.117|188404|35|NZ_LT906434|CRT matches to MF417892 (Uncultured Caudovirales phage clone 2F_2, partial genome) position: , mismatch: 8, identity: 0.771

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tgttttctccaataaaaaaccgcccgaaggcggct	Protospacer
.* **   **** ***** ************** *

67. spacer 1.2|136786|34|NZ_LT906434|CRT,CRISPRCasFinder matches to MH015259 (Ruegeria phage vB_RpoP-V17, complete genome) position: , mismatch: 9, identity: 0.735

ctgcggcagcggggcaaatgtgattgcttttgcc	CRISPR spacer
cgaagaaggtggggaagatgtgattgcttttgcc	Protospacer
* . *. .*.**** *.*****************

68. spacer 1.2|136786|34|NZ_LT906434|CRT,CRISPRCasFinder matches to NC_049435 (Ruegeria phage vB_RpoP-V12, complete genome) position: , mismatch: 9, identity: 0.735

ctgcggcagcggggcaaatgtgattgcttttgcc	CRISPR spacer
cgaagaaggtggggaagatgtgattgcttttgcc	Protospacer
* . *. .*.**** *.*****************

69. spacer 1.2|136786|34|NZ_LT906434|CRT,CRISPRCasFinder matches to MH015253 (Ruegeria phage vB_RpoP-V21, complete genome) position: , mismatch: 9, identity: 0.735

ctgcggcagcggggcaaatgtgattgcttttgcc	CRISPR spacer
cgaagaaggtggggaagatgtgattgcttttgcc	Protospacer
* . *. .*.**** *.*****************

70. spacer 1.2|136786|34|NZ_LT906434|CRT,CRISPRCasFinder matches to FJ591093 (Roseophage DSS3P2, complete genome) position: , mismatch: 9, identity: 0.735

ctgcggcagcggggcaaatgtgattgcttttgcc	CRISPR spacer
cgaagaaggtggggaagatgtgattgcttttgcc	Protospacer
* . *. .*.**** *.*****************

71. spacer 1.2|136786|34|NZ_LT906434|CRT,CRISPRCasFinder matches to MH015257 (Ruegeria phage vB_RpoP-V14, complete genome) position: , mismatch: 9, identity: 0.735

ctgcggcagcggggcaaatgtgattgcttttgcc	CRISPR spacer
cgaagaaggtggggaagatgtgattgcttttgcc	Protospacer
* . *. .*.**** *.*****************

72. spacer 1.13|137502|34|NZ_LT906434|CRT,CRISPRCasFinder,PILER-CR matches to KF302035 (UNVERIFIED: Pseudoalteromonas phage HS6, complete genome) position: , mismatch: 9, identity: 0.735

gtggtcgattacgagcaccaaaccctgcacaaag	CRISPR spacer
cactttgactacgagcaccaaaccctgcacgccg	Protospacer
    *.**.*********************.  *

73. spacer 3.35|187020|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_AF135182 (Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence) position: , mismatch: 9, identity: 0.735

gttgccggttgccgtgctggatgcgttggcgctt	CRISPR spacer
gctgaacaatgccgtgctgggtgcgctggcgctg	Protospacer
*.**   . ***********.****.*******

74. spacer 3.35|187020|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_002523 (Serratia entomophila plasmid pADAP, complete sequence) position: , mismatch: 9, identity: 0.735

gttgccggttgccgtgctggatgcgttggcgctt	CRISPR spacer
gctgaacaatgccgtgctgggtgcgctggcgctg	Protospacer
*.**   . ***********.****.*******

75. spacer 3.35|187020|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP041127 (Serratia marcescens strain WVU-005 plasmid pWVU-005-1, complete sequence) position: , mismatch: 9, identity: 0.735

gttgccggttgccgtgctggatgcgttggcgctt	CRISPR spacer
gctgaacaatgccgtgctgggtgcgctggcgctg	Protospacer
*.**   . ***********.****.*******

76. spacer 3.51|188073|35|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP029726 (Proteus mirabilis strain AR_0029 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

ggtagcgtaatattcaaggccgtttttttattgtt	CRISPR spacer
aaaaacggcgtattcagcgccgtttttttattgtt	Protospacer
.. *.**  .******. *****************

77. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MN871440 (UNVERIFIED: Aeromonas phage AsFcp_1, complete genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
aaaaaagaagaaaaaaatccacccgaaggtggat	Protospacer
.*  *.*  .**********.********.****

78. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MH791407 (UNVERIFIED: Aeromonas phage AsFcp_4, partial genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
aaaaaagaagaaaaaaatccacccgaaggtggat	Protospacer
.*  *.*  .**********.********.****

79. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to AF447491 (Bacteriophage phiE125, complete genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tcttctcccaaaaaaatgccgcccgaaggcggca	Protospacer
  **   *********  **************

80. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_041926 (Escherichia phage vB_EcoM_ECOO78, complete genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ttgtcacccaataaaaaaccgcccgaaggcggtt	Protospacer
   * . **** ***** ************** *

81. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_003309 (Burkholderia phage phiE125, complete genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tcttctcccaaaaaaatgccgcccgaaggcggca	Protospacer
  **   *********  **************

82. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP045368 (Marinobacter sp. THAF39 plasmid phiTHAF39, complete sequence) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ttttcaggcaaaagaaaaccgcccgaaggcggtc	Protospacer
  ** .* *****.*** ************** .

83. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
cagacaggcacaaaaaaaccgcccgaaggcggct	Protospacer
 *   .* ** ****** ************** *

84. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to JX403940 (Acinetobacter phage YMC/09/02/B1251_ABA_BP, complete genome) position: , mismatch: 9, identity: 0.735

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
cctttaggcaataaaaaaccgcccgaaggcggca	Protospacer
  ** .* *** ***** **************

85. spacer 3.65|184958|35|NZ_LT906434|CRT matches to NC_015065 (Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence) position: , mismatch: 9, identity: 0.743

aataccca--atgctcgagaccatcaaggcggagctt	CRISPR spacer
--tttcgagcatgctcgaaaacatcaaggcggagcga	Protospacer
  * .* *  ********.* **************

86. spacer 3.90|186621|34|NZ_LT906434|CRT matches to MN908685 (Microbacterium phage PauloDiaboli, complete genome) position: , mismatch: 9, identity: 0.735

cgtaattaacgcccaatcctgcgtttccagcagt	CRISPR spacer
ggacacccacgcctcatcctgcgtttccagcagc	Protospacer
 *  *.. *****. ******************.

87. spacer 3.117|188404|35|NZ_LT906434|CRT matches to MH791401 (UNVERIFIED: Aeromonas phage AsFcp_2, complete genome) position: , mismatch: 9, identity: 0.743

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
aaaaaagaagaaaaaaaatccacccgaaggtggat	Protospacer
 .*  **.  ***********.********.****

88. spacer 3.117|188404|35|NZ_LT906434|CRT matches to AF447491 (Bacteriophage phiE125, complete genome) position: , mismatch: 9, identity: 0.743

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctcttctcccaaaaaaatgccgcccgaaggcggca	Protospacer
*  **   *********  **************

89. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_003309 (Burkholderia phage phiE125, complete genome) position: , mismatch: 9, identity: 0.743

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctcttctcccaaaaaaatgccgcccgaaggcggca	Protospacer
*  **   *********  **************

90. spacer 3.4|184959|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_015065 (Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence) position: , mismatch: 10, identity: 0.706

atacccaatgctcgagaccatcaaggcggagctt	CRISPR spacer
ttcgagcatgctcgaaaacatcaaggcggagcga	Protospacer
 *     ********.* **************

91. spacer 3.37|187152|32|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MH179480 (Pseudomonas phage 98PfluR60PP, complete genome) position: , mismatch: 10, identity: 0.688

ttggggcgcaggcagaatgtccatcgtgtcgg	CRISPR spacer
tactacaccaagcagactgtccatcgtgtcgt	Protospacer
*   .   **.***** **************

92. spacer 3.37|187152|32|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_048697 (Pseudomonas phage Littlefix, complete genome) position: , mismatch: 10, identity: 0.688

ttggggcgcaggcagaatgtccatcgtgtcgg	CRISPR spacer
tactacaccaagcagactgtccatcgtgtcgt	Protospacer
*   .   **.***** **************

93. spacer 3.44|187609|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 10, identity: 0.706

gaataatttcatcggcagttgcctcaacaatacg	CRISPR spacer
cctcaagctcatcggcactggcctcaacaatatc	Protospacer
   .** .********* * ************.

94. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_009235 (Burkholderia phage phi644-2 chromosome, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctcttctccaaaaaaatgccgcccgaaggcggca	Protospacer
  .*   *********  **************

95. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to CP000625 (Burkholderia phage phi644-2, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
ctcttctccaaaaaaatgccgcccgaaggcggca	Protospacer
  .*   *********  **************

96. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NZ_CP042265 (Litoreibacter sp. LN3S51 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tgacagttcaaaaaaatgccgcccgaaggcggca	Protospacer
 . .** .********  **************

97. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MN013077 (Klebsiella phage vB_KaeM_KaOmega, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

98. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MF979563 (Pectobacterium phage DU_PP_IV, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

99. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_048067 (Escherichia phage C130_2, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
agtgctatcaacaaaaaaccgcccgaaggcggtt	Protospacer
..*   ..*** ***** ************** *

100. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to MF979560 (Pectobacterium phage DU_PP_I, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

101. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to KC954774 (Cronobacter phage CR8, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

102. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_028672 (Cronobacter phage PBES 02, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

103. spacer 3.56|188405|34|NZ_LT906434|PILER-CR,CRISPRCasFinder matches to NC_017974 (Cronobacter phage CR3, complete genome) position: , mismatch: 10, identity: 0.706

gattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
attgcaagcaataaaaaaccgcccgaaggcggtt	Protospacer
. *  .. *** ***** ************** *

104. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_041926 (Escherichia phage vB_EcoM_ECOO78, complete genome) position: , mismatch: 10, identity: 0.714

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
tttgtcacccaataaaaaaccgcccgaaggcggtt	Protospacer
.   * . **** ***** ************** *

105. spacer 1.4|136916|34|NZ_LT906434|CRT,CRISPRCasFinder matches to MK448879 (Streptococcus phage Javan226, complete genome) position: , mismatch: 11, identity: 0.676

caaaggctattctgctaaagtggtttcttttact	CRISPR spacer
tgttttgtgttctgctaaaattgtttcttttacg	Protospacer
..     *.**********.* ***********

106. spacer 3.117|188404|35|NZ_LT906434|CRT matches to NC_009235 (Burkholderia phage phi644-2 chromosome, complete genome) position: , mismatch: 11, identity: 0.686

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
actcttctccaaaaaaatgccgcccgaaggcggca	Protospacer
   .*   *********  **************

107. spacer 3.117|188404|35|NZ_LT906434|CRT matches to CP000625 (Burkholderia phage phi644-2, complete genome) position: , mismatch: 11, identity: 0.686

cgattaggccaaaaaaaatccgcccgaaggcggat	CRISPR spacer
actcttctccaaaaaaatgccgcccgaaggcggca	Protospacer
   .*   *********  **************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

142061 : 160841

Mannheimia_phage(18.75%)

terminase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085364250.1\|142061_143033_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-33	38.1
WP_085364266.1\|143606_144494_-	S24 family peptidase	A0A2I7S9A5	Vibrio_phage	1.3e-09	29.8
WP_054599816.1\|144829_145075_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_085364249.1\|145071_147210_+\|transposase	Mu transposase C-terminal domain-containing protein	A0A1C6ZDN4	Pseudomonas_phage	1.2e-122	39.1
WP_085364248.1\|147439_148159_+	ATP-binding protein	L7P7S2	Pseudomonas_phage	2.2e-63	55.7
WP_085364247.1\|148155_148713_+	hypothetical protein	M4SNW4	Rhodobacter_phage	8.1e-18	33.0
WP_085364265.1\|148720_149026_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085364246.1\|149103_149343_+	hypothetical protein	NA	NA	NA	NA
WP_085364245.1\|149694_150162_+	hypothetical protein	NA	NA	NA	NA
WP_157739131.1\|150163_150754_+	DUF2786 domain-containing protein	A0A2H4JCP9	uncultured_Caudovirales_phage	1.6e-19	35.9
WP_085364243.1\|150750_151581_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	5.1e-32	50.0
WP_157739132.1\|151574_151724_+	hypothetical protein	NA	NA	NA	NA
WP_085364242.1\|151728_152256_+	hypothetical protein	C9DGL8	Escherichia_phage	9.4e-32	43.9
WP_157739133.1\|152255_152432_+	hypothetical protein	NA	NA	NA	NA
WP_085364241.1\|152474_152768_+	hypothetical protein	A0A289ZTW9	Serratia_phage	7.1e-13	46.4
WP_054599803.1\|152774_152981_+	hypothetical protein	NA	NA	NA	NA
WP_054599802.1\|152993_153206_+	hypothetical protein	NA	NA	NA	NA
WP_085364240.1\|153335_153956_+	hypothetical protein	A0A1B3B253	Gordonia_phage	5.3e-10	41.0
WP_085364239.1\|154170_154527_+	regulatory protein GemA	A0A0M3LP80	Mannheimia_phage	1.2e-17	42.6
WP_085417944.1\|154733_155195_+	hypothetical protein	A0A0M3LRS6	Mannheimia_phage	1.7e-13	35.2
WP_085364237.1\|155218_155428_+	hypothetical protein	NA	NA	NA	NA
WP_085364236.1\|155706_156330_+	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	5.1e-53	59.5
WP_085364235.1\|156329_156551_+	hypothetical protein	NA	NA	NA	NA
WP_085364233.1\|156726_156960_+	hypothetical protein	A0A0M4UKB4	Ralstonia_phage	4.3e-05	43.1
WP_085364232.1\|156940_157360_+	hypothetical protein	NA	NA	NA	NA
WP_085364264.1\|157379_157607_+	hypothetical protein	NA	NA	NA	NA
WP_085364263.1\|157956_158217_+	hypothetical protein	NA	NA	NA	NA
WP_085364230.1\|158213_158432_+	hypothetical protein	NA	NA	NA	NA
WP_085364229.1\|158433_158937_+	DUF1804 family protein	F6MIK6	Haemophilus_phage	8.9e-32	39.5
WP_085364228.1\|158948_159200_+	hypothetical protein	NA	NA	NA	NA
WP_085364227.1\|159212_160841_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	1.1e-179	60.4

DBSCAN-SWA_2

486751 : 555908

Tupanvirus(12.5%)

coat,holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085363686.1\|486751_487777_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_143773803.1\|487755_490329_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_095197822.1\|490369_491095_-	molecular chaperone	NA	NA	NA	NA
WP_085356796.1\|491302_491902_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_085363688.1\|492100_492775_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_085363689.1\|493042_493543_-	cytochrome c	NA	NA	NA	NA
WP_054600053.1\|493909_495163_+	divalent metal cation transporter	NA	NA	NA	NA
WP_054600034.1\|495355_495808_+	hypothetical protein	NA	NA	NA	NA
WP_085363690.1\|496227_498555_+	type I DNA topoisomerase	A0A2K9L1Q2	Tupanvirus	6.5e-101	38.6
WP_085363691.1\|500184_500922_+	pirin family protein	NA	NA	NA	NA
WP_004284755.1\|501013_501622_+	nitroreductase family protein	NA	NA	NA	NA
WP_004284753.1\|501752_502436_+	hydrolase	NA	NA	NA	NA
WP_004284751.1\|502522_502744_+	DUF1427 family protein	NA	NA	NA	NA
WP_085363692.1\|502744_504637_+	amidohydrolase	NA	NA	NA	NA
WP_085363693.1\|504797_505697_+	pirin family protein	NA	NA	NA	NA
WP_085363694.1\|506067_507669_+	MFS transporter	A0A2K5B2B5	Erysipelothrix_phage	6.8e-09	24.3
WP_085363695.1\|507933_508497_-	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_085363696.1\|508598_509243_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_085363697.1\|509412_509793_-	MAPEG family protein	NA	NA	NA	NA
WP_085363698.1\|509869_510307_-	cytochrome c	NA	NA	NA	NA
WP_085363699.1\|510625_511879_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	2.2e-07	43.7
WP_085363700.1\|512106_512775_-	response regulator transcription factor	NA	NA	NA	NA
WP_085363701.1\|512863_513436_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_085363702.1\|513688_514582_+	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.0e-22	33.8
WP_085363703.1\|514663_515743_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_085363704.1\|515901_516867_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_085363705.1\|517010_518429_-	alanine:cation symporter family protein	NA	NA	NA	NA
WP_158087793.1\|518745_520038_+	transferrin-binding protein-like solute binding protein	NA	NA	NA	NA
WP_085363707.1\|523065_524250_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_143773804.1\|524366_524585_+	hypothetical protein	NA	NA	NA	NA
WP_085363708.1\|524561_525338_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_085363709.1\|525413_525869_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_085363710.1\|525871_526927_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_085363711.1\|527021_527534_-	OmpH family outer membrane protein	NA	NA	NA	NA
WP_085363712.1\|527568_529968_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_085363741.1\|529973_531314_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_085363713.1\|531538_532729_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_085363714.1\|532802_533561_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_085363715.1\|533608_534406_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_085363716.1\|534409_535159_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.1e-17	35.6
WP_054600055.1\|535301_535859_-	ribosome recycling factor	NA	NA	NA	NA
WP_085363717.1\|536103_536292_-	hypothetical protein	NA	NA	NA	NA
WP_085363718.1\|536478_538986_+	TonB-dependent receptor	NA	NA	NA	NA
WP_157739142.1\|539193_540159_-	DUF4349 domain-containing protein	NA	NA	NA	NA
WP_085356680.1\|540208_540787_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_085363720.1\|541006_541210_+	hypothetical protein	NA	NA	NA	NA
WP_085363721.1\|541374_542100_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_085363722.1\|542242_543097_+	elongation factor Ts	NA	NA	NA	NA
WP_054600429.1\|543370_544090_+	UMP kinase	NA	NA	NA	NA
WP_095197823.1\|544311_546588_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_054600044.1\|546765_547449_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_085363724.1\|547781_549245_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_085363725.1\|549331_549610_+	hypothetical protein	NA	NA	NA	NA
WP_085363726.1\|549682_551542_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	1.2e-49	31.7
WP_085363727.1\|552030_553719_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	2.4e-52	29.7
WP_085363728.1\|553895_555908_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	2.1e-15	23.7

DBSCAN-SWA_3

970326 : 978891

Gordonia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085364004.1\|970326_971682_-	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	4.7e-35	28.9
WP_085364003.1\|971999_973538_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	7.5e-13	23.7
WP_169709797.1\|973751_973910_-	hypothetical protein	NA	NA	NA	NA
WP_085364002.1\|974190_976656_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.6e-68	28.9
WP_095197902.1\|976691_976967_-	hypothetical protein	NA	NA	NA	NA
WP_085364000.1\|977104_977737_-	7-carboxy-7-deazaguanine synthase QueE	A0A1V0DYC7	Dinoroseobacter_phage	3.1e-13	34.8
WP_085363999.1\|977741_978164_-	6-carboxytetrahydropterin synthase QueD	E7DN67	Pneumococcus_phage	1.2e-24	43.9
WP_085363998.1\|978240_978891_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	4.7e-57	53.5

DBSCAN-SWA_4

1060452 : 1070125

Salicola_phage(16.67%)

tRNA,integrase

attL 1055609:1055628|attR 1075454:1075473

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1055609:1055628	attL	NA	NA	NA	NA
WP_085363893.1\|1060452_1061316_+	RNA polymerase sigma factor RpoH	A0A248SJA5	Salicola_phage	4.2e-45	39.5
WP_085363892.1\|1061382_1061883_-	non-heme ferritin	NA	NA	NA	NA
WP_085363891.1\|1062278_1063175_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	1.8e-22	26.7
WP_085363889.1\|1063473_1064997_-	DUF853 family protein	A0A248XCZ8	Klebsiella_phage	2.0e-82	44.7
WP_085363888.1\|1065559_1066636_-	peptide chain release factor 1	G0YKC3	Acinetobacter_phage	5.3e-05	45.5
WP_085363887.1\|1067073_1067400_-	hypothetical protein	NA	NA	NA	NA
WP_054598949.1\|1067383_1067686_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	6.8e-11	38.5
WP_085363886.1\|1067761_1070125_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.0e-05	27.6
1075454:1075473	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2041076 : 2050175

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085363658.1\|2041076_2041835_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	4.5e-19	30.3
WP_085363659.1\|2041976_2042819_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_085363660.1\|2042808_2043525_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_085363661.1\|2043534_2044293_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-37	42.7
WP_085363662.1\|2044557_2046711_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2K9L285	Tupanvirus	7.8e-08	33.8
WP_085363663.1\|2046736_2046943_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_085363664.1\|2047003_2047621_-	guanylate kinase	A0A240FAU9	Liberibacter_phage	3.9e-13	34.3
WP_085363665.1\|2047809_2048373_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.8e-33	43.7
WP_085363666.1\|2048546_2050175_+	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	2.4e-57	27.5

DBSCAN-SWA_6

2063909 : 2073651

uncultured_Mediterranean_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085364449.1\|2063909_2064569_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.2e-30	46.8
WP_085364450.1\|2064568_2065321_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.4e-65	47.4
WP_085364451.1\|2065600_2066749_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_085364464.1\|2066846_2068412_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.1e-22	32.3
WP_085364452.1\|2068553_2068892_-	hypothetical protein	NA	NA	NA	NA
WP_085364453.1\|2068967_2069417_-	hypothetical protein	NA	NA	NA	NA
WP_085364454.1\|2069487_2069934_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.3e-26	46.5
WP_085364455.1\|2070020_2070236_-	DUF1653 domain-containing protein	NA	NA	NA	NA
WP_085364465.1\|2070238_2070463_-	hypothetical protein	NA	NA	NA	NA
WP_002217533.1\|2070611_2070815_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	3.4e-22	78.8
WP_085364456.1\|2071056_2071371_+\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_085364457.1\|2071371_2073651_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.4e-166	41.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT906434

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection