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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT960615 Hartmannibacter diazotrophicus strain E19T plasmid HDIAp1, complete sequence 0 crisprs NA 0 0 0 0
NZ_LT960614 Hartmannibacter diazotrophicus strain E19T chromosome 1 6 crisprs csa3,cas3,PD-DExK,WYL,RT,DEDDh 0 23 9 0

Results visualization

1. NZ_LT960614
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_1 590112-590209 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_2 706420-706506 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_3 842650-844630 Unclear I-E
32 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_4 3755696-3755800 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_6 5011740-5012038 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT960614_5 5011314-5011682 Orphan NA
5 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT960614_3 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843106-843137 32 NZ_CP021408 Celeribacter manganoxidans strain DY25 plasmid pDY25-D, complete sequence 35916-35947 5 0.844
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 MF490237 Pseudomonas phage vB_PaeP_E220, complete genome 6869-6900 5 0.844
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_AP014706 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence 256284-256315 5 0.844
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP032342 Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence 707899-707930 5 0.844
NZ_LT960614_3 3.14|843472|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843472-843503 32 NZ_CP022363 Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence 695399-695430 6 0.812
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 MH271305 Gordonia phage Morrissey, complete genome 28647-28678 6 0.812
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 KM389325 UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000169 genomic sequence 6777-6808 6 0.812
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 KM389212 UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence 7237-7268 6 0.812
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 KM389210 UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence 41863-41894 6 0.812
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_AP022578 Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence 24833-24864 6 0.812
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_AP022578 Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence 111673-111704 6 0.812
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_AP022578 Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence 262895-262926 6 0.812
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP029835 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence 166697-166728 6 0.812
NZ_LT960614_3 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842679-842710 32 NC_023285 Streptomyces sp. F8 plasmid pFRL5, complete sequence 99980-100011 7 0.781
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NC_021289 Burkholderia insecticola plasmid p1, complete sequence 290597-290628 7 0.781
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 KM378617 Vibrio phage VpKK5, complete genome 34421-34452 7 0.781
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 MT075871 Klebsiella phage vB_KleS-HSE3, complete genome 7345-7376 7 0.781
NZ_LT960614_3 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843289-843320 32 MH553517 Serratia phage Scapp, complete genome 2249-2280 7 0.781
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP015268 Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 1, complete sequence 137895-137926 7 0.781
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP015279 Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence 115854-115885 7 0.781
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NC_009931 Acaryochloris marina MBIC11017 plasmid pREB6, complete sequence 38102-38133 7 0.781
NZ_LT960614_3 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843899-843930 32 NZ_CP024895 Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence 273463-273494 7 0.781
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_AP017960 Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence 16324-16355 7 0.781
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_KY349138 Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence 98295-98326 7 0.781
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 NC_042088 Gordonia phage Gustav, complete genome 29064-29095 7 0.781
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 NC_023575 Pseudomonas phage vB_PaeP_Tr60_Ab31 26117-26148 7 0.781
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 NZ_CP035506 Haematobacter massiliensis strain OT1 plasmid pOT1-6, complete sequence 71929-71960 7 0.781
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 61804-61835 7 0.781
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_016972 Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence 35885-35916 7 0.781
NZ_LT960614_3 3.3|842801|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842801-842832 32 NC_011892 Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence 15257-15288 8 0.75
NZ_LT960614_3 3.5|842923|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842923-842954 32 NC_016626 Burkholderia sp. YI23 plasmid byi_1p, complete sequence 1850327-1850358 8 0.75
NZ_LT960614_3 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843106-843137 32 MT723940 Mycobacterium phage Ellie, complete genome 36897-36928 8 0.75
NZ_LT960614_3 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843106-843137 32 NC_009508 Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence 57355-57386 8 0.75
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NC_013207 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02, complete sequence 56084-56115 8 0.75
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP013632 Rhizobium sp. N324 plasmid pRspN324b, complete sequence 89670-89701 8 0.75
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP053565 Pseudonocardia sp. Gen01 plasmid unnamed1, complete sequence 1642-1673 8 0.75
NZ_LT960614_3 3.13|843411|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843411-843442 32 MN693680 Marine virus AFVG_250M653, complete genome 21759-21790 8 0.75
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NC_009467 Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence 139799-139830 8 0.75
NZ_LT960614_3 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843594-843625 32 NZ_CP034188 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed4, complete sequence 19449-19480 8 0.75
NZ_LT960614_3 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843960-843991 32 NC_011982 Agrobacterium vitis S4 plasmid pTiS4, complete sequence 15313-15344 8 0.75
NZ_LT960614_3 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843960-843991 32 NC_011982 Agrobacterium vitis S4 plasmid pTiS4, complete sequence 206457-206488 8 0.75
NZ_LT960614_3 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843960-843991 32 NZ_KY000075 Agrobacterium vitis strain CFBP2681 plasmid pTi_CFBP2681, complete sequence 2653-2684 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP025016 Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence 309889-309920 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NC_008379 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence 79662-79693 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 363355-363386 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NC_007763 Rhizobium etli CFN 42 plasmid p42b, complete sequence 25038-25069 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP021025 Rhizobium sp. TAL182 plasmid pRetTAL182a, complete sequence 21375-21406 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP020907 Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence 25033-25064 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NC_021906 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence 25038-25069 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 38202-38233 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 138203-138234 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP021128 Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence 313403-313434 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP013512 Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence 21376-21407 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP054025 Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence 28104-28135 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 CP007645 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence 369943-369974 8 0.75
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP054034 Rhizobium sp. JKLM13E plasmid pPR13E03, complete sequence 276817-276848 8 0.75
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 613491-613522 8 0.75
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP054618 Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence 281806-281837 8 0.75
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 AP013533 Uncultured Mediterranean phage uvMED DNA, complete genome, group G4, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C34 5812-5843 8 0.75
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 JQ182729 Enterobacterial phage mEp390, complete genome 25200-25231 8 0.75
NZ_LT960614_3 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842679-842710 32 CP006582 Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence 199395-199426 9 0.719
NZ_LT960614_3 3.3|842801|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842801-842832 32 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 382905-382936 9 0.719
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NZ_KU140623 Sinorhizobium sp. M14 plasmid pSinB, complete sequence 182208-182239 9 0.719
NZ_LT960614_3 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843106-843137 32 NZ_CP027239 Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence 91378-91409 9 0.719
NZ_LT960614_3 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843106-843137 32 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 373790-373821 9 0.719
NZ_LT960614_3 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843228-843259 32 NZ_CP049358 Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence 301099-301130 9 0.719
NZ_LT960614_3 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843228-843259 32 NZ_CP031159 Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence 279736-279767 9 0.719
NZ_LT960614_3 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843228-843259 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 5857838-5857869 9 0.719
NZ_LT960614_3 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843289-843320 32 NZ_CP015867 Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence 455937-455968 9 0.719
NZ_LT960614_3 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843289-843320 32 NZ_CP014276 Martelella sp. AD-3 plasmid unnamed1, complete sequence 7026-7057 9 0.719
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 523428-523459 9 0.719
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 2245756-2245787 9 0.719
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP022565 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence 165558-165589 9 0.719
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NC_025431 Mesorhizobium phagevB_MloP_Lo5R7ANS, complete genome 41464-41495 9 0.719
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 309018-309049 9 0.719
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 308227-308258 9 0.719
NZ_LT960614_3 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843533-843564 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1606124-1606155 9 0.719
NZ_LT960614_3 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843594-843625 32 NC_016138 Pseudomonas aeruginosa plasmid pUM505, complete sequence 100112-100143 9 0.719
NZ_LT960614_3 3.20|843838|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843838-843869 32 NC_008757 Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence 43143-43174 9 0.719
NZ_LT960614_3 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843899-843930 32 NZ_CP035002 Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence 348377-348408 9 0.719
NZ_LT960614_3 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843899-843930 32 NZ_CP046906 Streptomyces sp. QHH-9511 plasmid unnamed, complete sequence 20501-20532 9 0.719
NZ_LT960614_3 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843960-843991 32 NZ_CP019314 Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence 57511-57542 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 1495208-1495239 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 250241-250272 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 394181-394212 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 253067-253098 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 1456016-1456047 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 317779-317810 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 1046884-1046915 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 1440844-1440875 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 1474261-1474292 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 1503259-1503290 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021128 Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence 344229-344260 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 73273-73304 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 152403-152434 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 58065-58096 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 1616811-1616842 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 1383988-1384019 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 CP007645 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence 400769-400800 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 1152375-1152406 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 598158-598189 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 1205103-1205134 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 1649683-1649714 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 1484942-1484973 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 460007-460038 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 247507-247538 9 0.719
NZ_LT960614_3 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844204-844235 32 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 250242-250273 9 0.719
NZ_LT960614_3 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844326-844357 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 248622-248653 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP049813 Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence 13-44 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP050101 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence 36807-36838 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP050106 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence 70827-70858 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP025016 Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence 174481-174512 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP053442 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence 36659-36690 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP018233 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence 135333-135364 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP025506 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence 61764-61795 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP016293 Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence 237231-237262 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP007050 Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence 179217-179248 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NC_012852 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence 149659-149690 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP050111 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence 71011-71042 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 274750-274781 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 516566-516597 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP054025 Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence 82463-82494 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP022668 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence 514512-514543 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP054034 Rhizobium sp. JKLM13E plasmid pPR13E03, complete sequence 45337-45368 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP022569 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence 147577-147608 9 0.719
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NZ_CP050088 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence 196017-196048 9 0.719
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 MK279874 Arthrobacter phage Riovina, complete genome 40169-40200 9 0.719
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 MK279851 Arthrobacter phage Eunoia, complete genome 40846-40877 9 0.719
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 MK112526 Arthrobacter phage Aledel, complete genome 40169-40200 9 0.719
NZ_LT960614_3 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844448-844479 32 MK279868 Arthrobacter phage OMalley, complete genome 40169-40200 9 0.719
NZ_LT960614_3 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844509-844540 32 NC_029075 Achromobacter phage JWF, complete genome 37562-37593 9 0.719
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP024936 Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence 258477-258508 9 0.719
NZ_LT960614_3 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842679-842710 32 NZ_CP016618 Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence 364584-364615 10 0.688
NZ_LT960614_3 3.4|842862|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 842862-842893 32 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 249481-249512 10 0.688
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NZ_CP030933 Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence 498991-499022 10 0.688
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NC_016110 Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence 105649-105680 10 0.688
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NZ_CP014527 Haematospirillum jordaniae strain H5569 plasmid unnamed 2, complete sequence 12987-13018 10 0.688
NZ_LT960614_3 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843045-843076 32 NZ_CP014527 Haematospirillum jordaniae strain H5569 plasmid unnamed 2, complete sequence 291789-291820 10 0.688
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2750217-2750248 10 0.688
NZ_LT960614_3 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843350-843381 32 NZ_CP025547 Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence 297503-297534 10 0.688
NZ_LT960614_3 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843594-843625 32 NZ_CP007797 Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence 209041-209072 10 0.688
NZ_LT960614_3 3.17|843655|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 843655-843686 32 NZ_LN832562 Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence 697796-697827 10 0.688
NZ_LT960614_3 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844387-844418 32 NC_008537 Arthrobacter sp. FB24 plasmid 1, complete sequence 62549-62580 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_019848 Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence 1052218-1052249 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 407102-407133 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 411405-411436 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP019585 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence 461691-461722 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP019585 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence 530945-530976 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 308541-308572 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 312844-312875 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 1103225-1103256 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 1107527-1107558 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP021803 Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence 115389-115420 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP046574 Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence 249616-249647 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 147349-147380 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 217334-217365 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 934604-934635 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 406764-406795 10 0.688
NZ_LT960614_3 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT 844570-844601 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 411067-411098 10 0.688

1. spacer 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021408 (Celeribacter manganoxidans strain DY25 plasmid pDY25-D, complete sequence) position: , mismatch: 5, identity: 0.844

aggcgccagcggctcgacaccac-ctgccccgc	CRISPR spacer
agccgcctgcggctcgacaccacgctgcgcgg-	Protospacer
** **** *************** **** * * 

2. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MF490237 (Pseudomonas phage vB_PaeP_E220, complete genome) position: , mismatch: 5, identity: 0.844

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
gctgtgctcgtcgtcgtgctccggcgtccagc	Protospacer
* .***   ***********************

3. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 5, identity: 0.844

tgctc-accagccgttcggggcgctcgtccacg	CRISPR spacer
-gctcgacgagccgttcggggcgctcgaccagc	Protospacer
 **** ** ****************** ***  

4. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 5, identity: 0.844

tgctc-accagccgttcggggcgctcgtccacg	CRISPR spacer
-gctcgacgagccgttcggggcgctcgaccagc	Protospacer
 **** ** ****************** ***  

5. spacer 3.14|843472|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.812

atgcacgccacgacgcaggacgagcatcccgt	CRISPR spacer
atgaacgcgacgacgcaggacgagcattcgac	Protospacer
*** **** ******************.* ..

6. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MH271305 (Gordonia phage Morrissey, complete genome) position: , mismatch: 6, identity: 0.812

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
gaggccttggtcctggtccggttcatgaacta	Protospacer
  ****************.**********   

7. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to KM389325 (UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000169 genomic sequence) position: , mismatch: 6, identity: 0.812

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
gcaatagaggtcgtcgtgctccggcgtccagc	Protospacer
*  .*.*..***********************

8. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to KM389212 (UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence) position: , mismatch: 6, identity: 0.812

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
gcaatagaggtcgtcgtgctccggcgtccagc	Protospacer
*  .*.*..***********************

9. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to KM389210 (UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence) position: , mismatch: 6, identity: 0.812

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
gcaatagaggtcgtcgtgctccggcgtccagc	Protospacer
*  .*.*..***********************

10. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022578 (Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence) position: , mismatch: 6, identity: 0.812

tgctca---ccagccgttcggggcgctcgtccacg	CRISPR spacer
---tcaggctcagccgttcgggtcgctcgaccacg	Protospacer
   ***   .************ ****** *****

11. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022578 (Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence) position: , mismatch: 6, identity: 0.812

tgctca---ccagccgttcggggcgctcgtccacg	CRISPR spacer
---tcaggctcagccgttcgggtcgctcgaccacg	Protospacer
   ***   .************ ****** *****

12. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022578 (Mycolicibacterium aubagnense strain JCM 15296 plasmid pJCM15296, complete sequence) position: , mismatch: 6, identity: 0.812

tgctca---ccagccgttcggggcgctcgtccacg	CRISPR spacer
---tcaggctcagccgttcgggtcgctcgaccacg	Protospacer
   ***   .************ ****** *****

13. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.812

tgctcacc---agccgttcggggcgctcgtccacg	CRISPR spacer
---tcacccaatgctgttcggtgcgctcgtccacg	Protospacer
   *****    **.****** *************

14. spacer 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 7, identity: 0.781

caggtggcgagcatgacgtccgcggcctatgc	CRISPR spacer
cgggtggcgagcgtgacgtgcgcggtgttcgc	Protospacer
*.**********.****** *****. * .**

15. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
cctatatctcggcggcgctcttccccggcagc	Protospacer
.** .**. *************** .******

16. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to KM378617 (Vibrio phage VpKK5, complete genome) position: , mismatch: 7, identity: 0.781

tcttcattgcggcggcgctcttc-catggcagc	CRISPR spacer
tcttcgatgcggcggcgctcttcgccttccaa-	Protospacer
*****. **************** * *  **. 

17. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MT075871 (Klebsiella phage vB_KleS-HSE3, complete genome) position: , mismatch: 7, identity: 0.781

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
tcttcctggcggcggcgctcttcgtctgcggc	Protospacer
***** * ***************  . **.**

18. spacer 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MH553517 (Serratia phage Scapp, complete genome) position: , mismatch: 7, identity: 0.781

-tactgcggcgacggcgttgtcatgccgaacgt	CRISPR spacer
gcattgc-acgacggctttgtcctgccgaacgg	Protospacer
 .*.*** .******* ***** ********* 

19. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015268 (Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.781

atggtcagcgatgtcgtgttcgc--cgttccgtc	CRISPR spacer
gcggtccgcgatgtcgtggtcgccgcgttcgg--	Protospacer
..**** *********** ****  ***** *  

20. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015279 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.781

atggtcagcgatgtcgtgttcgc--cgttccgtc	CRISPR spacer
gcggtccgcgatgtcgtggtcgccgcgttcgg--	Protospacer
..**** *********** ****  ***** *  

21. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_009931 (Acaryochloris marina MBIC11017 plasmid pREB6, complete sequence) position: , mismatch: 7, identity: 0.781

gagaagatcacgctcgtcgacaaggagaccgg--	CRISPR spacer
ctgaagatcacgctcagcgacaag--gaccgaac	Protospacer
  *************. *******  *****.  

22. spacer 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024895 (Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

accgacat-ggagatcctgaaggtctccgccga	CRISPR spacer
-cagacccgggagatcctggaggtccccgccgc	Protospacer
 * *** . **********.*****.****** 

23. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017960 (Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 7, identity: 0.781

gcgaggagatcatcggcgattgccggttgatt-	CRISPR spacer
cagaggaaatcatcggcgatcgcc-gttgctgc	Protospacer
  *****.************.*** **** *  

24. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 7, identity: 0.781

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
ggtatctccacatcggcaccggaggtcttgac	Protospacer
   * ************.******** *** *

25. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_042088 (Gordonia phage Gustav, complete genome) position: , mismatch: 7, identity: 0.781

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
cggtccttggtcctggtccggttcatgaacta	Protospacer
. * **************.**********   

26. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_023575 (Pseudomonas phage vB_PaeP_Tr60_Ab31) position: , mismatch: 7, identity: 0.781

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
gcaatagaggtcgtcgtgctccggtgtccagc	Protospacer
*  .*.*..***************.*******

27. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035506 (Haematobacter massiliensis strain OT1 plasmid pOT1-6, complete sequence) position: , mismatch: 7, identity: 0.781

gacgtgggagtcgtcgtgctccggcgtccagc-	CRISPR spacer
atcgtgggagtggtcgtgctccgccg-gaagca	Protospacer
. ********* *********** **   *** 

28. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 7, identity: 0.781

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
ggtgtcgaggtcgtcgagctccggcttccagc	Protospacer
*..** *..******* ******** ******

29. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_016972 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence) position: , mismatch: 7, identity: 0.781

tgctca-ccagccgttcggggcgctcgtccacg	CRISPR spacer
-gctggcccagccgctcggtgcgctcgtccatc	Protospacer
 *** . *******.**** ***********. 

30. spacer 3.3|842801|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 8, identity: 0.75

ccatatgaggcgacgtgctgttgcccggcatg	CRISPR spacer
tcgcctgaggcgaagtgatgttgcccggcaca	Protospacer
.*.. ******** *** ************..

31. spacer 3.5|842923|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 8, identity: 0.75

tcgttcagatattcccgcatccgctccggccg	CRISPR spacer
tcccgccgatattgccgcatccgctacggcac	Protospacer
** . * ****** *********** ****  

32. spacer 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MT723940 (Mycobacterium phage Ellie, complete genome) position: , mismatch: 8, identity: 0.75

aggcgccagcggctcgacaccacctgccccgc	CRISPR spacer
gactgccagcggcccgacaacacctgccctgg	Protospacer
.. .*********.***** *********.* 

33. spacer 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_009508 (Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence) position: , mismatch: 8, identity: 0.75

aggcgccagcggctcgacaccacctgccccgc	CRISPR spacer
cagcgccagcggctcgacacgagctgggcggg	Protospacer
 .****************** * ***  * * 

34. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_013207 (Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02, complete sequence) position: , mismatch: 8, identity: 0.75

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
ctcttgttcgatgtcgggttcgccgtaccgtc	Protospacer
 *  *   ******** ********* *****

35. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013632 (Rhizobium sp. N324 plasmid pRspN324b, complete sequence) position: , mismatch: 8, identity: 0.75

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
aaggtcatcgatgtcgtcttcgccgcgcagga	Protospacer
* ***** ********* *******. * *  

36. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053565 (Pseudonocardia sp. Gen01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

atggtcagcgatgtcgtgttcgccg-ttccgtc	CRISPR spacer
ggggtcagcgcggtcgtgttcgccgagatcgt-	Protospacer
. ********  *************   .*** 

37. spacer 3.13|843411|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MN693680 (Marine virus AFVG_250M653, complete genome) position: , mismatch: 8, identity: 0.75

tggaaactccagcatgaaggtcagctcccgag	CRISPR spacer
tggtaactccagcatgaagatcaccgtctctg	Protospacer
*** ***************.*** * .*.  *

38. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_009467 (Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence) position: , mismatch: 8, identity: 0.75

gagaagatcacgctcgtcgacaaggagaccgg	CRISPR spacer
aaatgggacacgctcgccgacaaggaaaccgg	Protospacer
.*. .*. ********.*********.*****

39. spacer 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034188 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

cctgtcacgccgccacggagccacagcccaag	CRISPR spacer
ccagcaccgccgccacgaagccccagcccagc	Protospacer
** *.  **********.**** *******. 

40. spacer 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 8, identity: 0.75

ttccatctcgcgtgaccagtcc----tgcgctaagg	CRISPR spacer
caccatctccggtgaccagtcctgcatgcgct----	Protospacer
. *******  ***********    ******    

41. spacer 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 8, identity: 0.75

ttccatctcgcgtgaccagtcc----tgcgctaagg	CRISPR spacer
caccatctccggtgaccagtcctgcatgcgct----	Protospacer
. *******  ***********    ******    

42. spacer 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY000075 (Agrobacterium vitis strain CFBP2681 plasmid pTi_CFBP2681, complete sequence) position: , mismatch: 8, identity: 0.75

ttccatctcgcgtgaccagtcc----tgcgctaagg	CRISPR spacer
caccatctccggtgaccagtcctgcatgcgct----	Protospacer
. *******  ***********    ******    

43. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025016 (Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

44. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_008379 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

45. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

46. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_007763 (Rhizobium etli CFN 42 plasmid p42b, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctgacgct	Protospacer
*** ***************.*** *.*  *  

47. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021025 (Rhizobium sp. TAL182 plasmid pRetTAL182a, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

48. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020907 (Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctgacgct	Protospacer
*** ***************.*** *.*  *  

49. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_021906 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctgacgct	Protospacer
*** ***************.*** *.*  *  

50. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

51. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

52. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

53. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013512 (Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

54. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054025 (Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

55. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acggcgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

56. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054034 (Rhizobium sp. JKLM13E plasmid pPR13E03, complete sequence) position: , mismatch: 8, identity: 0.75

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
acgacgctgttcttcctgacgatcctggcgct	Protospacer
*** ***************.*** *.*  *  

57. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
cgcagctccacatcgacgccggcggtcggctc	Protospacer
*  ************.****** ***    **

58. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
cgaagctccacatcgacgccggcggtcggctc	Protospacer
* .************.****** ***    **

59. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to AP013533 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G4, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C34) position: , mismatch: 8, identity: 0.75

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
ttggccttggtcttggactggttgctcttgcc	Protospacer
************.*** ******  *   * *

60. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 8, identity: 0.75

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
tccgtactggtcgtcatgctcaggcgtccagc	Protospacer
  ***.  .******.***** **********

61. spacer 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to CP006582 (Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence) position: , mismatch: 9, identity: 0.719

caggtggcgagcatgacgtccgcggcctatgc	CRISPR spacer
taagtgtcgagcatgacttccgcggctagctc	Protospacer
.*.*** ********** ********. .. *

62. spacer 3.3|842801|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

ccatatgaggcgacgtgctgttgcccggcatg	CRISPR spacer
gcctgctgagcgacgtgatgatgcccggcatg	Protospacer
 * *.. ..******** ** ***********

63. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU140623 (Sinorhizobium sp. M14 plasmid pSinB, complete sequence) position: , mismatch: 9, identity: 0.719

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
catccgagtcggcggcgatcttccaaggcagc	Protospacer
. *.*.   ******** ******* ******

64. spacer 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aggcgccagcggctcgacaccacctgccccgc	CRISPR spacer
cggcgccagccgatcgacaccaccgcctgggg	Protospacer
 ********* * ***********  *.  * 

65. spacer 3.8|843106|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.719

aggcgccagcggctcgacaccacctgccccgc	CRISPR spacer
tggcgcgagcggctcggcaccaccatcgaggg	Protospacer
 ***** *********.*******  *   * 

66. spacer 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gcctactgcatcgagaaggactccagttcgat	CRISPR spacer
ctggtcggcttcgagaaggacgccagttcgag	Protospacer
 .   * ** *********** ********* 

67. spacer 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 9, identity: 0.719

gcctactgcatcgagaaggactccagttcgat	CRISPR spacer
ctggtcggcttcgagaaggacgccagttcgag	Protospacer
 .   * ** *********** ********* 

68. spacer 3.10|843228|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gcctactgcatcgagaaggactccagttcgat	CRISPR spacer
acgcaccgcatcgagaaggagtccagtgatag	Protospacer
.* .**.************* ******   * 

69. spacer 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 9, identity: 0.719

tactgcggcgacggcgttgtcatgccgaacgt	CRISPR spacer
gcccacaaggacggcgtggtcatgccgaccgt	Protospacer
  *..*.. ******** ********** ***

70. spacer 3.11|843289|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014276 (Martelella sp. AD-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tactgcggcgacggcgttgtcatgc---cgaacgt	CRISPR spacer
gtttgcggcgacggcgtcatcatgccttcgca---	Protospacer
  .**************..******   ** *   

71. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
ggcgcgcccgacgtcgtggtcgccgttccgtc	Protospacer
.  *.   ***.****** *************

72. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 9, identity: 0.719

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
ggtgcgcccgaggtcgtggtcgccgttccgtc	Protospacer
.  *.   *** ****** *************

73. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.719

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
ggcgcgcccgacgtcgtggtcgccgttccgtc	Protospacer
.  *.   ***.****** *************

74. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_025431 (Mesorhizobium phagevB_MloP_Lo5R7ANS, complete genome) position: , mismatch: 9, identity: 0.719

gagaagatcacgctcgtcgacaaggagaccgg	CRISPR spacer
aatggccgaacggtcgtcgacaaggagaccgg	Protospacer
.* ..    *** *******************

75. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gagaagatcacgctcgtcgacaaggagaccgg	CRISPR spacer
aagaagatcaagctcgccgacaagatcacgcc	Protospacer
.********* *****.*******.  **   

76. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gagaagatcacgctcgtcgacaaggagaccgg	CRISPR spacer
aagaagatcaagctcgccgacaagatcacgcc	Protospacer
.********* *****.*******.  **   

77. spacer 3.15|843533|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

gagaagatcacgctcgtcgacaaggagaccgg	CRISPR spacer
gtcgccatcacgctcggcgaccaggagacggt	Protospacer
*  .  ********** **** ******* * 

78. spacer 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_016138 (Pseudomonas aeruginosa plasmid pUM505, complete sequence) position: , mismatch: 9, identity: 0.719

cctgtcacgccgccacggagccacagcccaag	CRISPR spacer
agtcacacgccgcctcggagccactgccattg	Protospacer
  *  ********* ********* ***   *

79. spacer 3.20|843838|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_008757 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcctggggatgccagctcatctcgcccag	CRISPR spacer
ctggcattgggatgccagctcatccactacga	Protospacer
***** * ****************.  . *..

80. spacer 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 9, identity: 0.719

accgacatggagatcctgaaggtctccgccga	CRISPR spacer
gtcatgccggagagcctgaaggtctacgccga	Protospacer
..*.   .***** *********** ******

81. spacer 3.21|843899|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046906 (Streptomyces sp. QHH-9511 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

accgacatggagatcctgaaggtctccgccga	CRISPR spacer
tccgacgtggagatcgtgaaggtcaagccggg	Protospacer
 *****.******** ********    * *.

82. spacer 3.22|843960|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 9, identity: 0.719

ttccatctcgcgtgaccagtcctgcgctaagg	CRISPR spacer
gtccacctcgcgtggccagtcctgcccgggca	Protospacer
 ****.********.********** * .. .

83. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

84. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

85. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagatcatcggcggctgccggttggcg	Protospacer
 *  *.************..*********.. 

86. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

87. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

88. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

89. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

90. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

91. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

92. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

93. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021128 (Rhizobium sp. Kim5 plasmid pRetKim5d, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagatcatcggcggctgccggttggcg	Protospacer
 *  *.************..*********.. 

94. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

95. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

96. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

97. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

98. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

99. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagatcatcggcggctgccggttggcg	Protospacer
 *  *.************..*********.. 

100. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

101. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

102. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

103. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

104. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

105. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

106. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

107. spacer 3.26|844204|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaggagatcatcggcgattgccggttgatt	CRISPR spacer
cctcgaagaccatcggcgattgcccgttggca	Protospacer
 *  *.***.************** ****.. 

108. spacer 3.28|844326|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acgtcgctgttcttcctgatgatgccgtaggg	CRISPR spacer
ccgtcgctgttcttccaggtgatgttggtgtc	Protospacer
 *************** *.*****..*  *  

109. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
atatcgtccacatcagcgccggaggtgatgct	Protospacer
 *.   ********.************ **..

110. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050101 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

111. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

112. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025016 (Rhizobium leguminosarum strain Norway plasmid pRLN4, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

113. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

114. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

115. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

116. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

117. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007050 (Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

118. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

119. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

120. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

121. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

122. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054025 (Rhizobium sp. JKLM12A2 plasmid pPR12A204, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

123. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

124. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054034 (Rhizobium sp. JKLM13E plasmid pPR13E03, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

125. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022569 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK05, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

126. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.719

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
gcggcgaccatatcggcgtcggaggtgttgac	Protospacer
 .*.   ***.*******.*********** *

127. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MK279874 (Arthrobacter phage Riovina, complete genome) position: , mismatch: 9, identity: 0.719

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
gtggccttggtggtggtctggttctcggtcat	Protospacer
 **********  *********** .*.  *.

128. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MK279851 (Arthrobacter phage Eunoia, complete genome) position: , mismatch: 9, identity: 0.719

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
gtggccttggtggtggtctggttctcggtcat	Protospacer
 **********  *********** .*.  *.

129. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MK112526 (Arthrobacter phage Aledel, complete genome) position: , mismatch: 9, identity: 0.719

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
gtggccttggtggtggtctggttctcggtcat	Protospacer
 **********  *********** .*.  *.

130. spacer 3.30|844448|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to MK279868 (Arthrobacter phage OMalley, complete genome) position: , mismatch: 9, identity: 0.719

ttggccttggtcctggtctggttcatgaagac	CRISPR spacer
gtggccttggtggtggtctggttctcggtcat	Protospacer
 **********  *********** .*.  *.

131. spacer 3.31|844509|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_029075 (Achromobacter phage JWF, complete genome) position: , mismatch: 9, identity: 0.719

gacgtgggagtcgtcgtgctccggcgtccagc	CRISPR spacer
cgtgggcgactcgtcgtgctccggcgttcacg	Protospacer
 ..* * ** *****************.**  

132. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 9, identity: 0.719

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tcttcaccagcctttcggcgcgctcgctcgtc	Protospacer
* .********* ***** *******..*.. 

133. spacer 3.1|842679|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016618 (Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

caggtggcgagcatgacgtccgcggcctatgc	CRISPR spacer
tggctggcgagcaggacgtcggcggccgtgaa	Protospacer
..* ********* ****** ******   . 

134. spacer 3.4|842862|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 10, identity: 0.688

taagtcccggtcgcgtcgtagaaatcgacagc	CRISPR spacer
aggaagccggtcgcggcgtggaaatcgacgga	Protospacer
 ...  ********* ***.*********.* 

135. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 10, identity: 0.688

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
tcttcattgcggcaacgctcttcgccatcttt	Protospacer
*************..********  .. *  .

136. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_016110 (Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence) position: , mismatch: 10, identity: 0.688

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
tgccgcagccggcggcgttcatccatggcagc	Protospacer
* ..     ********.** ***********

137. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014527 (Haematospirillum jordaniae strain H5569 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.688

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
gcggtcatgcggcggtgctcttccttggcact	Protospacer
 *  .  ********.******** ***** .

138. spacer 3.7|843045|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014527 (Haematospirillum jordaniae strain H5569 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.688

tcttcattgcggcggcgctcttccatggcagc	CRISPR spacer
gcggtcatgcggcggtgctcttccttggcact	Protospacer
 *  .  ********.******** ***** .

139. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
ggggtcggcgatgtcgtgttcgacgaagtggt	Protospacer
. ****.*************** **   .* .

140. spacer 3.12|843350|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atggtcagcgatgtcgtgttcgccgttccgtc	CRISPR spacer
gtggtcagcgatgtcaagttcgcccgcgaccc	Protospacer
.**************. *******  .   .*

141. spacer 3.16|843594|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 10, identity: 0.688

cctgtcacgccgccacggagccacagcccaag	CRISPR spacer
cgccccacgccgccacggacccccagccgggc	Protospacer
* . .************** ** ***** .. 

142. spacer 3.17|843655|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 10, identity: 0.688

ccgtcgcgcccgcagggaacggactgaaagcc	CRISPR spacer
ggcaagcgtccgcagggaacggacggaacggg	Protospacer
     ***.*************** *** *  

143. spacer 3.29|844387|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_008537 (Arthrobacter sp. FB24 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

ctgagctccacatcggcgccggaggtgttgtc	CRISPR spacer
tgttatttaacatcggtgccggaggtcttgtc	Protospacer
.   ..*. *******.********* *****

144. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

145. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

146. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

147. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

148. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

149. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

150. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

151. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

152. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

153. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021803 (Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

154. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
acgcggtcagccgttcggcgagctcgtccatg	Protospacer
   . ..*********** * *********.*

155. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

156. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

157. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggctctcgcccagt	Protospacer
*... . ************** ****.***  

158. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

159. spacer 3.32|844570|32|NZ_LT960614|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

tgctcaccagccgttcggggcgctcgtccacg	CRISPR spacer
tatcggacagccgttcggggccctcgcccagt	Protospacer
*... . ************** ****.***  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 767060 : 775676 8 Ruegeria_phage(33.33%) NA NA
DBSCAN-SWA_2 808228 : 832069 24 Burkholderia_phage(17.65%) integrase,portal,head,tail,terminase,capsid attL 805442:805457|attR 835416:835431
DBSCAN-SWA_3 935623 : 943676 8 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_4 1447128 : 1453422 11 Geobacillus_phage(25.0%) portal,head,tail,protease,capsid NA
DBSCAN-SWA_5 2107802 : 2171283 77 Aurantimonas_phage(23.53%) transposase,integrase,tRNA,portal,head,tail,plate,terminase,protease,capsid attL 2100128:2100143|attR 2131233:2131248
DBSCAN-SWA_6 2318908 : 2328166 9 Brazilian_cedratvirus(16.67%) NA NA
DBSCAN-SWA_7 2389230 : 2416927 46 Ochrobactrum_phage(27.78%) tail,transposase,capsid,plate NA
DBSCAN-SWA_8 2421240 : 2478603 54 Bacillus_phage(22.22%) tail,tRNA,plate NA
DBSCAN-SWA_9 2570067 : 2578696 9 uncultured_Mediterranean_phage(88.89%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage