CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_LT960777	Lactobacillus sakei strain FLEC01 chromosome 1	1 crisprs	csa3,cas3,DinG,csn2,cas2,cas9,DEDDh	24	7
NZ_LT960778	Lactobacillus sakei strain FLEC01 plasmid 2, complete sequence	0 crisprs	NA	0	0
NZ_LT960779	Lactobacillus sakei strain FLEC01 plasmid 3, complete sequence	0 crisprs	NA	0	0
NZ_LT960780	Lactobacillus sakei strain FLEC01 plasmid 4, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT960777_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT960777_1

1109695-1112041

TypeII

Consensus_repeat	Method
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	CRISPRCasFinder
ACTCATTGATTTGATACTCTTCTAAAAC	CRT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	PILER-CR

35 spacers

csn2,cas2,cas9

The CRISPR arrays of NZ_LT960777_1

>merge|NZ_LT960777|1|1109695-1112041|CRISPRCasFinder,CRT,PILER-CR
ATCGAACTGCTCATTGATTTGATACTCTTCTAAAACAAACCACTTTGTAAAATCTTCTTGAACCGTGTTGAACTAATCATTGATTTGATACTCTTCTAAAACTGCGAAAGGCGGCGAGATTAATCCTGAACAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACATCATCCTAACTGACCCATCAAACTGTTCAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACACCCAACGTCGCCAGTTAAATGATAGTAGGGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTAACCTTGTAACCAGCGTTATTCTGTAAACGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTGTTCACCGGTTTAAAAAATCCCATTTAATGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTACTGATCTAGAATCTGCCAATAAATTAGCGTTGAACTACTCATTGATTTGATACTCTTCTAAAACCCAATCCTTTAAGGCGTGAAATAGTATTCTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTGTCGTTGTCCCAGATTGTAATAACTTCTTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACCGTGCAGTTTATTATCATATTCGACAATTGGTTGAACTACTCATTGATTTGATACTCTTCTAAAACATAGTTGCGTTCGCTAGACTTATAGGCCTTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACAATGGAATAGTTTAATTTGGGATGATAAAAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACCTAAAACGGCAGTGGTTAACAATGGTTTGTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACCATTATCGAGATTTTAACAAAGATATTAAAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTAGCGCGAAAGTGTGTCTATTATTGCGCGTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACGGACAATTTGGACTTACACCGATAACACCAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTTACTGTAATGCCAAGTCAAACGTTAGATTGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTAAGCACCGCCTGGACAAGGTTGAAGCACAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACACGTCTTTAAACGGTTACCCGTAGTATTCAGTTGAACTACTCATTGATTTGATACTCTTCTAAAACTATAATCTGTTGTTAAAAATGCCATTGTTAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACTTATGACAATCCAATTAAACAAATGTTTGTGTTGAACCACTCATTGATTTGATACTCTTCTAAAACAAAGCTCATTATAGTCTACAAACGAAGTAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACTACGATAATACCCGCCAAACCGGTCTAACAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACAATCGTGCTTATCAGCGTTGTTGTTGCGCTGTTGAACCACTCATTGATTTGATACTCTTCTAAAACATTCTTTGTCGTAGGCGTACCAATTGCCGTTGTTGAACCACTCATTGATTTGATACTCTTCTAAAACAAGAAGAAGTTGCTAAAAAGGTCGACGTAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACGCCAAATCATTTATCTTTTCCACCAAAGAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACGATGCGGTGGTATACCAATAATACGTTTAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACATATACGTTCTTCTTCCAACATGTGAGCATGTTGAACCACTCATTGATTTGATACTCTTCTAAAACGTGCTCATAAGCCTCTAAAAACTCAACCAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACTCCTTTTGCGTGCAAGATCCTTATTGGCACGTTGAACCACTCATTGATTTGATACTCTTCTAAAACTAAAAGAAGCTTACGATGGATTAGACCCCAGTTGAGCCACTCATTGATTTGATACTCTTCTAAAACTAGCTTTTAACGGCTTCAATGCTTGGCCAAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACTATAAGTAATAGTACACTATCGCTTGGATAGTTGAACCACTCATTGATTTGATACTCTTCTAAAACCTCGCAAGCTGATTATGACGCATTGGCTGAGTTGAACCACTCATTGATTTGATACTCTTCTAAAAC

>NZ_LT960777|1|1|1109695-1112041|CRISPRCasFinder
ATCGAACTGCTCATTGATTTGATACTCTTCTAAAAC	AAACCACTTTGTAAAATCTTCTTGAACCGT
GTTGAACTAATCATTGATTTGATACTCTTCTAAAAC	TGCGAAAGGCGGCGAGATTAATCCTGAACA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	ATCATCCTAACTGACCCATCAAACTGTTCA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	ACCCAACGTCGCCAGTTAAATGATAGTAGG
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TAACCTTGTAACCAGCGTTATTCTGTAAAC
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TGTTCACCGGTTTAAAAAATCCCATTTAAT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TACTGATCTAGAATCTGCCAATAAATTAGC
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	CCAATCCTTTAAGGCGTGAAATAGTATTCT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TGTCGTTGTCCCAGATTGTAATAACTTCTT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	CGTGCAGTTTATTATCATATTCGACAATTG
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	ATAGTTGCGTTCGCTAGACTTATAGGCCTT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	AATGGAATAGTTTAATTTGGGATGATAAAA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	CTAAAACGGCAGTGGTTAACAATGGTTTGT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	CATTATCGAGATTTTAACAAAGATATTAAA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TAGCGCGAAAGTGTGTCTATTATTGCGCGT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	GGACAATTTGGACTTACACCGATAACACCA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TTACTGTAATGCCAAGTCAAACGTTAGATT
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TAAGCACCGCCTGGACAAGGTTGAAGCACA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	ACGTCTTTAAACGGTTACCCGTAGTATTCA
GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC	TATAATCTGTTGTTAAAAATGCCATTGTTA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TTATGACAATCCAATTAAACAAATGTTTGT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	AAAGCTCATTATAGTCTACAAACGAAGTAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TACGATAATACCCGCCAAACCGGTCTAACA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	AATCGTGCTTATCAGCGTTGTTGTTGCGCT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	ATTCTTTGTCGTAGGCGTACCAATTGCCGTT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	AAGAAGAAGTTGCTAAAAAGGTCGACGTAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GCCAAATCATTTATCTTTTCCACCAAAGAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GATGCGGTGGTATACCAATAATACGTTTAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	ATATACGTTCTTCTTCCAACATGTGAGCAT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GTGCTCATAAGCCTCTAAAAACTCAACCAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TCCTTTTGCGTGCAAGATCCTTATTGGCAC
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TAAAAGAAGCTTACGATGGATTAGACCCCA
GTTGAGCCACTCATTGATTTGATACTCTTCTAAAAC	TAGCTTTTAACGGCTTCAATGCTTGGCCAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TATAAGTAATAGTACACTATCGCTTGGATA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	CTCGCAAGCTGATTATGACGCATTGGCTGA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC

>NZ_LT960777|1|1|1109703-1112041|CRT
GCTCATTGATTTGATACTCTTCTAAAAC	AAACCACTTTGTAAAATCTTCTTGAACCGTGTTGAACT
AATCATTGATTTGATACTCTTCTAAAAC	TGCGAAAGGCGGCGAGATTAATCCTGAACAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	ATCATCCTAACTGACCCATCAAACTGTTCAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	ACCCAACGTCGCCAGTTAAATGATAGTAGGGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TAACCTTGTAACCAGCGTTATTCTGTAAACGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TGTTCACCGGTTTAAAAAATCCCATTTAATGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TACTGATCTAGAATCTGCCAATAAATTAGCGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	CCAATCCTTTAAGGCGTGAAATAGTATTCTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TGTCGTTGTCCCAGATTGTAATAACTTCTTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	CGTGCAGTTTATTATCATATTCGACAATTGGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	ATAGTTGCGTTCGCTAGACTTATAGGCCTTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	AATGGAATAGTTTAATTTGGGATGATAAAAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	CTAAAACGGCAGTGGTTAACAATGGTTTGTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	CATTATCGAGATTTTAACAAAGATATTAAAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TAGCGCGAAAGTGTGTCTATTATTGCGCGTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	GGACAATTTGGACTTACACCGATAACACCAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TTACTGTAATGCCAAGTCAAACGTTAGATTGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TAAGCACCGCCTGGACAAGGTTGAAGCACAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	ACGTCTTTAAACGGTTACCCGTAGTATTCAGTTGAACT
ACTCATTGATTTGATACTCTTCTAAAAC	TATAATCTGTTGTTAAAAATGCCATTGTTAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	TTATGACAATCCAATTAAACAAATGTTTGTGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	AAAGCTCATTATAGTCTACAAACGAAGTAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	TACGATAATACCCGCCAAACCGGTCTAACAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	AATCGTGCTTATCAGCGTTGTTGTTGCGCTGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	ATTCTTTGTCGTAGGCGTACCAATTGCCGTTGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	AAGAAGAAGTTGCTAAAAAGGTCGACGTAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	GCCAAATCATTTATCTTTTCCACCAAAGAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	GATGCGGTGGTATACCAATAATACGTTTAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	ATATACGTTCTTCTTCCAACATGTGAGCATGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	GTGCTCATAAGCCTCTAAAAACTCAACCAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	TCCTTTTGCGTGCAAGATCCTTATTGGCACGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	TAAAAGAAGCTTACGATGGATTAGACCCCAGTTGAGCC
ACTCATTGATTTGATACTCTTCTAAAAC	TAGCTTTTAACGGCTTCAATGCTTGGCCAAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	TATAAGTAATAGTACACTATCGCTTGGATAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC	CTCGCAAGCTGATTATGACGCATTGGCTGAGTTGAACC
ACTCATTGATTTGATACTCTTCTAAAAC

>NZ_LT960777|1|1|1111412-1112041|PILER-CR
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GCCAAATCATTTATCTTTTCCACCAAAGAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GATGCGGTGGTATACCAATAATACGTTTAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	ATATACGTTCTTCTTCCAACATGTGAGCAT
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	GTGCTCATAAGCCTCTAAAAACTCAACCAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TCCTTTTGCGTGCAAGATCCTTATTGGCAC
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TAAAAGAAGCTTACGATGGATTAGACCCCA
GTTGAGCCACTCATTGATTTGATACTCTTCTAAAAC	TAGCTTTTAACGGCTTCAATGCTTGGCCAA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	TATAAGTAATAGTACACTATCGCTTGGATA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC	CTCGCAAGCTGATTATGACGCATTGGCTGA
GTTGAACCACTCATTGATTTGATACTCTTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT960777.1\|WP_096584844.1\|1105715_1106204_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_LT960777.1\|WP_099947358.1\|1106190_1107429_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_LT960777.1\|WP_056947810.1\|1112067_1112739_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_LT960777.1\|WP_056947845.1\|1121615_1122815_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_LT960777.1\|WP_076632590.1\|1107406_1108711_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_LT960777.1\|WP_099947357.1\|1103072_1103501_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182510
NZ_LT960777.1\|WP_056946720.1\|1104028_1104235_+\|DUF378-domain-containing-protein	unknown	unknown	gnl\|CDD\|377214
NZ_LT960777.1\|WP_011374804.1\|1103556_1103844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT960777.1\|WP_099947667.1\|1114161_1118271_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_LT960777.1\|WP_016265247.1\|1104312_1105716_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NZ_LT960777.1\|WP_076648253.1\|1112735_1113056_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_LT960777.1\|WP_056947839.1\|1119220_1119910_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_LT960777.1\|WP_025016453.1\|1123167_1123416_-\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|237697
NZ_LT960777.1\|WP_056947848.1\|1122908_1123139_-\|DUF2969-domain-containing-protein	unknown	unknown	gnl\|CDD\|371411
NZ_LT960777.1\|WP_056946709.1\|1099986_1101294_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_LT960777.1\|WP_025016454.1\|1121288_1121597_-\|glycine-cleavage-system-protein-H	unknown	unknown	gnl\|CDD\|133457
NZ_LT960777.1\|WP_099947666.1\|1108723_1109506_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_LT960777.1\|WP_016265253.1\|1119902_1120937_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236863
NZ_LT960777.1\|WP_011374802.1\|1102373_1102724_-\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
NZ_LT960777.1\|WP_056947832.1\|1118385_1119201_-\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270315

Protein	Function_ID	Function_description	E-value
NZ_LT960777.1\|WP_096584844.1\|1105715_1106204_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.67946e-61
NZ_LT960777.1\|WP_099947358.1\|1106190_1107429_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_LT960777.1\|WP_056947810.1\|1112067_1112739_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	6.063e-85
NZ_LT960777.1\|WP_056947845.1\|1121615_1122815_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	4.50052e-96
NZ_LT960777.1\|WP_076632590.1\|1107406_1108711_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	4.10047e-116
NZ_LT960777.1\|WP_099947357.1\|1103072_1103501_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182510	PRK10514, PRK10514, putative acetyltransferase; Provisional.	4.93752e-27
NZ_LT960777.1\|WP_056946720.1\|1104028_1104235_+\|DUF378-domain-containing-protein	gnl\|CDD\|377214	pfam04070, DUF378, Domain of unknown function (DUF378). Predicted transmembrane domain of unknown function. The majority of the family have two predicted transmembrane regions.	2.26591e-22
NZ_LT960777.1\|WP_025016453.1\|1123167_1123416_-\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|237697	PRK14379, PRK14379, membrane protein insertion efficiency factor YidD.	1.12065e-42
NZ_LT960777.1\|WP_099947667.1\|1114161_1118271_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	7.95885e-145
NZ_LT960777.1\|WP_016265247.1\|1104312_1105716_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_LT960777.1\|WP_076648253.1\|1112735_1113056_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.7781e-28
NZ_LT960777.1\|WP_056947839.1\|1119220_1119910_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	3.48727e-89
NZ_LT960777.1\|WP_056947848.1\|1122908_1123139_-\|DUF2969-domain-containing-protein	gnl\|CDD\|371411	pfam11184, DUF2969, Protein of unknown function (DUF2969). This family of proteins with unknown function appears to be restricted to Lactobacillales.	1.94294e-18
NZ_LT960777.1\|WP_056946709.1\|1099986_1101294_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	4.2928e-111
NZ_LT960777.1\|WP_025016454.1\|1121288_1121597_-\|glycine-cleavage-system-protein-H	gnl\|CDD\|133457	cd06848, GCS_H, Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.	8.00756e-29
NZ_LT960777.1\|WP_099947666.1\|1108723_1109506_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	6.82497e-138
NZ_LT960777.1\|WP_016265253.1\|1119902_1120937_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	1.91746e-153
NZ_LT960777.1\|WP_011374802.1\|1102373_1102724_-\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	5.52642e-29
NZ_LT960777.1\|WP_056947832.1\|1118385_1119201_-\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270315	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold. This group includes the lipoprotein Tp32, a periplasmic component of a methionine uptake transporter system, and its closely related homologs. The Tp32 has both structural and sequential homology to the MetQ family of substrate-binding protein, and thus it belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	4.07948e-100

>NZ_LT960777.1|WP_099947666.1|1108723_1109506_-|Fe-S-cluster-assembly-ATPase-SufC
MSKLEIIDLHVGIDGKEILKGVNLEMNTGEIHAIMGPNGTGKSTLSETIMGNPKYEVLQGEIKLDGQNILEMPVDERARAGLFLAMQYPSEIQGVTNAEFMRAAINARRAEDDQISIMAFLKKLDQRMAVLDMTEEMSERYLNEGFSGGEKKRNEILQLMMIEPKFAILDEIDSGLDIDALQVVSKGVNEMRGDNFGSLIITHYQRLLNYIVPDFVHIMLGGKIVTTGDASLAKRLEDEGYAGIRDELGLDIKLTDDESK
>NZ_LT960777.1|WP_076632590.1|1107406_1108711_-|Fe-S-cluster-assembly-protein-SufD
MKKKLAITPEQVAAFSIAHQEPDWFAALRQTALGQIEKLDLPIFEKINYKHWPIMAASAPTLTTSATDTLPEMVADLTADQPYVVQVGQTIAKLNLPSELAEQGVIFTDIFTALQDYPELVHEYYMQVTVKPDEDRLTAFHTALMNSGMFLYVPKNVVIKQPITAYYVQDSTQATDFIHHVLIVAEQNSEFSYLENLQTMGDHKNLANMVVEVIAKDNSHVHFSAVDAFGKSVTTYLNRRGHLMRDARIDWALGFMNDGNIIGDFDSDLVGDGSHAETKVVAISTGKQIQGIDTRVTNIGPRSIGHILQHGVILEDATLTFNGIGHIIKGAKGADAQQENRVLMLSRTARGDANPLLLIDENDVQAGHAASVGRVNEQQMYYLMSRGLSKEVAQRLVIRGFLGAVLTEIPDKNVRQQLTDTIERKLIDGQKSEH
>NZ_LT960777.1|WP_099947358.1|1106190_1107429_-|cysteine-desulfurase
MGKSLNTSRQDFPILEQLVNDEPLVYLDNAATTQKPQAVIDQIVSYYQHDNANVHRGVHTLAERATAQYEAARVKVQQFINAASSAEIVFTKGTTQSLNWIAGSFGPTVVQAGDEIVISYMEHHSNLVPWQQLAKKTGAKLRYIDLLPDGQLDLDAAKQVIGPRTKIVSLVHASNVLGVVNPVKTIAALVHVQGGYMVVDGAQAVPHMPVDVQALDADFYAFSGHKMLGPTGIGVLYGKQALLEQLSPVEYGGEMIDFVGLQESTFKELPWRLEGGTPNIAGAIGLGAAIDYLNQIGMTNIQAHEQALVAEALPALQAIDGLTIYGPQEASQRTGVIAFNLDNLHPHDLATALDMEGVAVRAGHHCAQPLMQWLNVVATARASFYLYNTSEDVQALVAAIQAAKEFFQNGTL
>NZ_LT960777.1|WP_096584844.1|1105715_1106204_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MALSKLDNLYRQVILDHSQHPHHHGHLDTVDHEIELRNPTCGDVLQLEIALEDNRISQIAFSGEGCTISQASASMMTDAVLHKTPAEAEVMIERFSDMVIGDRDEDWTILEDAAILQGIQQFPARIKCATLAWKALHKALNSDTNTATTGQIVNHAETEGTD
>NZ_LT960777.1|WP_016265247.1|1104312_1105716_-|Fe-S-cluster-assembly-protein-SufB
MTEETTMPQFENYDYGFSDDVEPVFSTGRGLTEDVVRAISHEKKEPQWMLDFRLKSFHAYEKMPMPDFGPDLSGLDLEHMLYYQKATDKQYRDWEDVPDKIKDTFDRLGVPEAERKYLAGSSAQYESEVVYHNMRDEFEKLGIIFTDMDTALREYPDIVKEYFSTLVKPTDNKFSALNSAVWSGGTFIYVPKGVRTDIPIQSYFRINAENSGQFERTLIVVDEGASVNYVEGCTAPSYSSDSLHAAVVEVFVKRDAYCRYTTIQNWSKNVYSLETKRAQAMENATMEWVDGNLGSKMTMKYPSVYLDGEGARGTMLSIAVAGEGVDQDSGARMIHAAPNTSSSIVSKSIAKDGGAVDYRGTVRFERDSDGSFAHVECDTIIMDDKSSSDTIPYNTILNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAVELNRLISYEMEGSVG
>NZ_LT960777.1|WP_056946720.1|1104028_1104235_+|DUF378-domain-containing-protein
MKTLDNIALTLLIVGGLNWLLVGLFKFDLVAMLFGGQAAIISRIVYVLVGLSALYCIKLFANINNMAR
>NZ_LT960777.1|WP_011374804.1|1103556_1103844_-|hypothetical-protein
MKQFEPARINDQYSLTLNETGNVMLSKVGVGIVGQMSYYYTRNDLPLFICRHEPRADLKTIHDVMVQLDAQLAEMVGCGCLMVGGQNVAQQCKMV
>NZ_LT960777.1|WP_099947357.1|1103072_1103501_+|GNAT-family-N-acetyltransferase
MLLNQLATTSDYALVPDIWERSVLATHNFLQPEDVTFYKTQIPHFLAQTVLRIWSLDNQPIGFSGTNGQELEMLFLDPHYIGGGYGHQILDWLINNQQINKIDVNEQNQRAKAFYLKHGFTVASRSQRDSFDKPYPILHLTR
>NZ_LT960777.1|WP_011374802.1|1102373_1102724_-|dihydroneopterin-aldolase
MYHIKINNMQFHSHIGVFQAEKDLGQRIEIDLKVAIMTPYQGDELTDTVSYADFYEVIAQLIAKSRANLVETIAHEIIQAIHALDPDRIGSVAVKVRKIAVPIEGIFDHVEIEMEG
>NZ_LT960777.1|WP_056946709.1|1099986_1101294_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MQDEEMVTQLPRMLYGEDERVTLLRQILKAMGQPDHAFSIIHVCGTNGKGSTSAMIAAILQASGYSVGLFTSPHIMAVEESIQINRQLISKAQFERLLATVQTVLKKLGFDPTTDLSYFETLVLVALVYFKQQQVDYVLWECGLGGELDATNAVDRVAYTLFTKISLDHMALLGDTIEAIATTKSKIIRPQTPVIVASEQTTIALNVLEAEAKRQSAPLQIAPRDWFVTSYPTSAGQEVTVKLPEREPLTVSLALAGTYQLENLLTVLTWYRQFCRDQGHAVDEIVLQRALGQVRLPGRFERLATEPLVVIDGAHNPDGIRQFVRSVQERYGDYDLTIVTGFLKDKAVAECLQLLTQLPARFILTTPINQDDRQLPVAELGALYTQITGQTAPEYPAIEAALRAASQPATGNKPQVILVVGSFYLLKTVRQHFLS
>NZ_LT960777.1|WP_056947810.1|1112067_1112739_-|type-II-A-CRISPR-associated-protein-Csn2
MNITYYPYEPFKVNNSKITILSTSSPSVYTKLIAGASGQDDTLHLSDDHYRLLEYIKGMIWIGEISAVDLNHLFQNKLIKKFTADLTDEQRQKVVNLNNELRATILEAAFMYELALDIDHELDLQKLIKFCNLKFSNDVQDDPYGIIESIVQTAIELQETRIITLINVSHYLSINQFNELVRLVATLDVKLFIIEFSELATPDRYQECCYYHIDNDYVEWRYE
>NZ_LT960777.1|WP_076648253.1|1112735_1113056_-|CRISPR-associated-endonuclease-Cas2
MRYRIMRLLVMFDLPTETSEDRKAYRHFRKALLNEGFLMIQYSVYVRVCVSKQSAQYIENRIAGYTPAAGLVQTLMVTEQQYNKMHFLVGKSSDDIRNSAERTLIL
>NZ_LT960777.1|WP_099947667.1|1114161_1118271_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAKTYNIGLDIGTNSIGWAVVDDQNHLMSIKGKYGYGVRLYDEGKTAEERRSFRTTRRRLKRRKWRLSLLREIFEPQITPLDNTFFLRQKQSSLSSKDNRKLYPEMSLFNDRTDTDFYTQYPTIYNLSRDLMTKNKQFDIREIYLAMHHIVKYRGHFLNESPVSSFKSSEIKLAENFETLNQIFNERFNESMFQLAVNDFDDLKALLLNDQQSASNRQKKALGMIYVPNENKSLEKQNKAIATELLKAILGLKAKFNVLTGIEVDDAKPWTLSFNSESFDEDIDKAATNIDDDSREIIAILQGLYSGILLAGIIPENQSLSEAMVEKYDQHAAHLKQLKSIYPLLSISDKKAIQQAYNYYIDGQDNAKAYSREDFYAATTKALKSYQDNETIAEILKLIELEQFMPKQRTKDNGAIPHQLHQQELERIIENQQKYYPWLAELNPNESRRKIAKYKLDELVAFRVPYYVGPLITSEQQQQSSNKKFAWMIRKAEGKITPWNFDEKVDRQASANEFIKRMTTTDTYLLAEDVLPKQSLVYQRFEVLNELNGIKIDDVPITVEQKQRIFNDLFMMQASVSVKNIQDYLVSKGYFASRPEITGLSDENKVISRLSTYHDLKAILGGIVDEANKQADLEKCVEWSTIFEDGKIFVEKLNEIEWLTDEQRKRLSSKRYRGWGRLSNKLLNQIVNENGQRIMDLLWDTTDNFMRIVHSEEFDKLISAANQTLLSKNDVQDVINDLYTSPQNKKALRQILLVVSDIQKAMKNQAPSKILIEFAREDEANPRLSVQRKRQVEQVYQNISKDILSDSDVKAELKDLTNTALANTRLFLYFMQGGHDMYTGETLNIDRLSEYDIDHILPQAFIKDNSLDNRVLVSAKMNRSKSDQVPLNDYTEERFGSKMRVQWEQMLRAGLITKRKYDNLTLNPDRISKYAMKGFINRQLVETRQVIKLVTNLLMDHYEDDEVQLITVKSGLIHQMREMFDFPKNRNLNNHHHAFDAYLTAFVGIYLLKRYPKLTPFFVYGSYQKNNTNDKWRNFNFLNDLKKEEVIDSDSHEVIWNKAQGLAELDKIYQFKKILVTREVHENTGALYNQTLYSAKDDKASGQGGKQLIPAKQDRPTALYGGYSGKTVAYMCIVRIKSKKEDTYKVCGVKTSWVAELERLSDSNEQLASLKAKLMPKFTKNKKQKGKTIQVTEDFEIIVPRVLINQRFYDNGQEITLGSATYKHNEQELMLNKKAVKLLNGQLSLVEAETLAPQVYDEILKQVMKYFPLYDTNQFRTKLKMGKEQFIKLPWKNKWDGNKLIHVGQQTVLDRILIGLHANAAVSDLSTLKVTTPFGKLQQPSGIALSLNTKIIYQSPTGLFERRVALRGL
>NZ_LT960777.1|WP_056947832.1|1118385_1119201_-|methionine-ABC-transporter-substrate-binding-protein
MQKRYLSVLAGLLIVGVLLTGCRAKKTDPNTIVIGASTIPHAAILRHIKPELKKEGITLDVKAFSDYVLPNKALASGELTANYYQHIPFMKKANHDNGYHLVSAGGIHLEPLGLYSKRVKKLSAVKTGATVLVSNSQTDWGRVLSILKTGGLITLKPGVKVENATFNDIAKNPKKLKFKYTFEPKLMPELLKNDEGTLVAINSNYAVQAGFTPEKDAVAIESLSSPYVNVVAVNKGDENKPAIKKLIKALKSKSTQAWIKKQWHGAVLPVK
>NZ_LT960777.1|WP_056947839.1|1119220_1119910_-|ABC-transporter-permease
MANINGFQSYFQFKQIDWPTMWEATVETVWLTAVSVLLVAILGFLLGLVLYQTNGKMDFMSRLLNGIVALFVNVFRSVPFIILIVLLIPMTKELMGTMIGPKAAIPALIVSAAPFYARLVELAFREVDSGVIEATRALGASKWQIIWQVLLPESMPALVSGLTVTAISLLGYTAMAGVIGAGGLGNLAYTEGFQANQNTITLVATIIILIIVFICQKAGDIIIAKIDHR
>NZ_LT960777.1|WP_016265253.1|1119902_1120937_-|methionine-ABC-transporter-ATP-binding-protein
MLELKQVGKVYQREQQTFTALSDISLKIEAGEIYGIIGYSGAGKSTLIRLLNGLEKPTSGDVLVNGQSIVGLSEQAMRPIRQKIGMIFQHFNLLWSKTILENIALPLKLAGVGKKERLAKAKEMLALVELTDLGAAYPSELSGGQKQRVAIARALISEPAILLCDEATSALDPKTTNSILSLLAKINQEMGITIVLVTHEMDAVRRICQRIAVMAAGRVIEEGTTQAIFETPQAEVTKAFVSESLVITPSETAASIEQLLTRVPEGTIVKLRFNEEQSSQPVIGQLMRRYPSVEVSVISGSLQQTINGALGYLYIQIQASPDDLKQALSDLSQQTIEVEVLRHG
>NZ_LT960777.1|WP_025016454.1|1121288_1121597_-|glycine-cleavage-system-protein-H
MSNNDYFWTEEIAASIRRIGLTKGAQNEFGLIKFVDVPVEGQKMALDMPLVAIEAEKMVQELDSPLAGELVNVNTDLADNPELLNADNEKDAWIADIRISDN
>NZ_LT960777.1|WP_056947845.1|1121615_1122815_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MPKELEKVDDTSRVDYGIVFSVFMLALVGLMSIYVAVTHDTSSASSTRAVLMQAAWYVIGGIAIVAIMQFDSEQLWRVAPIAYGIGIFLLVAVLFFYNRVVAIQTGAKSWFSLGPISFQPSEVMKPAYILMMSRVVTKHNTEYPEHTINADWLLLGRLLIWTLPVMVLLKLQNDFGTLLVFVAILGGIILVSGITWKILAPAMAIMAAIGGTALTLAVTTPGRAILTHLGFKTYQFNRIDAWLHPFDNTASTSLQLSQSLKAIGSGQLFGKGFNQIQVNVPVRESDMIFSVIGENFGFIGSCLVILLYFLLIYQMIRVTFDTKNEFYAYVSTGVIMMILFHVFENIGMSVGLLPLTGIPLPFISQGGSSLLGNMMGIGFIMSMRYHYKSYMFSESEDTF
>NZ_LT960777.1|WP_056947848.1|1122908_1123139_-|DUF2969-domain-containing-protein
MSKKEQRVEVTIDDINRNGQAMTSVKVGKNEVGVIVEDSAKKRFEATVEGTGQSIITKTHDDAVNELLREYHLHQG
>NZ_LT960777.1|WP_025016453.1|1123167_1123416_-|membrane-protein-insertion-efficiency-factor-YidD
MQKILIALVRFYQTGISPFLPPSCRYYPTCSSYMIQAIQKHGAIKGLIMGIGRILRCHPFVKGGYDPVPDHFTVFRNKSVND

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT960777_1	1.6\|1110061\|30\|NZ_LT960777\|CRISPRCasFinder	1110061-1110090	30	MN855837	Bacteriophage sp. isolate 206, complete genome	2147-2176	1	0.967
NZ_LT960777_1	1.7\|1110127\|30\|NZ_LT960777\|CRISPRCasFinder	1110127-1110156	30	MN855837	Bacteriophage sp. isolate 206, complete genome	3964-3993	1	0.967
NZ_LT960777_1	1.32\|1111778\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111778-1111807	30	MN855837	Bacteriophage sp. isolate 206, complete genome	7513-7542	2	0.933
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	MK504446	Lactobacillus phage SAC12B, complete genome	59096-59125	2	0.933
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	MN855837	Bacteriophage sp. isolate 206, complete genome	7668-7697	3	0.9
NZ_LT960777_1	1.16\|1110721\|30\|NZ_LT960777\|CRISPRCasFinder	1110721-1110750	30	MT939240	Enterococcus phage 9181, complete genome	68999-69028	4	0.867
NZ_LT960777_1	1.33\|1111844\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111844-1111873	30	KX077890	Streptococcus phage phiLP081102, complete genome	16165-16194	4	0.867
NZ_LT960777_1	1.33\|1111844\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111844-1111873	30	KX077895	Streptococcus phage phiZJ20091101-4, complete genome	17328-17357	4	0.867
NZ_LT960777_1	1.33\|1111844\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111844-1111873	30	KC413987	Streptococcus phage phiSS12, complete genome	15291-15320	4	0.867
NZ_LT960777_1	1.33\|1111844\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111844-1111873	30	MK448987	Streptococcus phage Javan576, complete genome	24448-24477	4	0.867
NZ_LT960777_1	1.1\|1109731\|30\|NZ_LT960777\|CRISPRCasFinder	1109731-1109760	30	NC_019782	Lactobacillus phage AQ113, complete genome	25520-25549	6	0.8
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	MK448753	Streptococcus phage Javan407, complete genome	17290-17319	6	0.8
NZ_LT960777_1	1.20\|1110985\|30\|NZ_LT960777\|CRISPRCasFinder	1110985-1111014	30	MN693910	Marine virus AFVG_250M312, complete genome	1349-1378	6	0.8
NZ_LT960777_1	1.27\|1111448\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111448-1111477	30	NZ_CP049227	Lactobacillus iners strain C0011D1 plasmid pC0011D1, complete sequence	54598-54627	6	0.8
NZ_LT960777_1	1.28\|1111514\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111514-1111543	30	MK448806	Streptococcus phage Javan565, complete genome	19212-19241	6	0.8
NZ_LT960777_1	1.28\|1111514\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111514-1111543	30	MK448990	Streptococcus phage Javan584, complete genome	21264-21293	6	0.8
NZ_LT960777_1	1.28\|1111514\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111514-1111543	30	MK448812	Streptococcus phage Javan577, complete genome	18928-18957	6	0.8
NZ_LT960777_1	1.42\|1110127\|38\|NZ_LT960777\|CRT	1110127-1110164	38	MN855837	Bacteriophage sp. isolate 206, complete genome	3964-4001	6	0.842
NZ_LT960777_1	1.1\|1109731\|30\|NZ_LT960777\|CRISPRCasFinder	1109731-1109760	30	NC_019763	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence	38783-38812	7	0.767
NZ_LT960777_1	1.7\|1110127\|30\|NZ_LT960777\|CRISPRCasFinder	1110127-1110156	30	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	665348-665377	7	0.767
NZ_LT960777_1	1.7\|1110127\|30\|NZ_LT960777\|CRISPRCasFinder	1110127-1110156	30	MH616963	CrAssphage sp. isolate ctbg_1, complete genome	77242-77271	7	0.767
NZ_LT960777_1	1.19\|1110919\|30\|NZ_LT960777\|CRISPRCasFinder	1110919-1110948	30	MG592393	Vibrio phage 1.007.O._10N.261.55.F9, partial genome	10852-10881	7	0.767
NZ_LT960777_1	1.21\|1111051\|30\|NZ_LT960777\|CRISPRCasFinder	1111051-1111080	30	NZ_AP017970	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-2, complete sequence	24314-24343	7	0.767
NZ_LT960777_1	1.30\|1111646\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111646-1111675	30	NC_018066	Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence	45205-45234	7	0.767
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	274703-274732	7	0.767
NZ_LT960777_1	1.41\|1110061\|38\|NZ_LT960777\|CRT	1110061-1110098	38	MN855837	Bacteriophage sp. isolate 206, complete genome	2139-2176	7	0.816
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	567354-567383	8	0.733
NZ_LT960777_1	1.9\|1110259\|30\|NZ_LT960777\|CRISPRCasFinder	1110259-1110288	30	NZ_AP017978	Neochlamydia sp. S13 plasmid pS13, complete sequence	12014-12043	8	0.733
NZ_LT960777_1	1.12\|1110457\|30\|NZ_LT960777\|CRISPRCasFinder	1110457-1110486	30	NZ_AP018258	Calothrix sp. NIES-4071 plasmid plasmid3 DNA, complete genome	78544-78573	8	0.733
NZ_LT960777_1	1.13\|1110523\|30\|NZ_LT960777\|CRISPRCasFinder	1110523-1110552	30	NZ_CP014638	Vibrio vulnificus strain CECT 4999 plasmid pR99, complete sequence	6399-6428	8	0.733
NZ_LT960777_1	1.13\|1110523\|30\|NZ_LT960777\|CRISPRCasFinder	1110523-1110552	30	NC_009701	Vibrio vulnificus plasmid pR99, complete sequence	5607-5636	8	0.733
NZ_LT960777_1	1.13\|1110523\|30\|NZ_LT960777\|CRISPRCasFinder	1110523-1110552	30	NC_009703	Vibrio vulnificus pC4602-2 plasmid	14727-14756	8	0.733
NZ_LT960777_1	1.13\|1110523\|30\|NZ_LT960777\|CRISPRCasFinder	1110523-1110552	30	NZ_CP012741	Vibrio vulnificus strain FORC_017 plasmid unnamed, complete sequence	52430-52459	8	0.733
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	10356-10385	8	0.733
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	26243-26272	8	0.733
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	125181-125210	8	0.733
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	127921-127950	8	0.733
NZ_LT960777_1	1.14\|1110589\|30\|NZ_LT960777\|CRISPRCasFinder	1110589-1110618	30	NC_019782	Lactobacillus phage AQ113, complete genome	1980-2009	8	0.733
NZ_LT960777_1	1.27\|1111448\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111448-1111477	30	NZ_CP021878	Enterococcus wangshanyuanii strain MN05 plasmid unnamed5	3180-3209	8	0.733
NZ_LT960777_1	1.27\|1111448\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111448-1111477	30	NZ_CP021878	Enterococcus wangshanyuanii strain MN05 plasmid unnamed5	53695-53724	8	0.733
NZ_LT960777_1	1.40\|1109995\|38\|NZ_LT960777\|CRT	1109995-1110032	38	MN855837	Bacteriophage sp. isolate 206, complete genome	7660-7697	8	0.789
NZ_LT960777_1	1.67\|1111778\|38\|NZ_LT960777\|CRT	1111778-1111815	38	MN855837	Bacteriophage sp. isolate 206, complete genome	7513-7550	8	0.789
NZ_LT960777_1	1.70\|1111976\|38\|NZ_LT960777\|CRT	1111976-1112013	38	MK504446	Lactobacillus phage SAC12B, complete genome	59088-59125	8	0.789
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_AP017932	Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence	9129-9158	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP035177	Lactobacillus plantarum strain SRCM103426 plasmid unnamed3	13244-13273	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP020098	Lactobacillus plantarum strain K25 plasmid unnamed5, complete sequence	3124-3153	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP025208	Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence	8884-8913	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP028979	Lactobacillus plantarum strain LQ80 plasmid pLQ802, complete sequence	24515-24544	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP046038	Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence	27888-27917	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP050807	Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP511, complete sequence	8664-8693	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP040377	Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed3, complete sequence	45431-45460	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_LT907984	Lactobacillus sakei subsp. sakei 23K plasmid pJ23A1, complete sequence	15149-15178	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_LT907987	Lactobacillus sakei strain T332 plasmid p332A2, complete sequence	14867-14896	9	0.7
NZ_LT960777_1	1.26\|1111382\|30\|NZ_LT960777\|CRISPRCasFinder	1111382-1111411	30	NC_015270	Enterococcus phage EFRM31, complete genome	8715-8744	9	0.7
NZ_LT960777_1	1.27\|1111448\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111448-1111477	30	MK448912	Streptococcus phage Javan340, complete genome	1557-1586	9	0.7
NZ_LT960777_1	1.30\|1111646\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111646-1111675	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	307413-307442	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP021525	Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1	77942-77971	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_017130	Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence	94695-94724	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_017134	Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence	94719-94748	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_017101	Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence	94703-94732	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP015165	Acetobacter ascendens strain LMG 1590 plasmid unnamed1, complete sequence	33486-33515	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_021976	Acetobacter pasteurianus 386B plasmid Apa386Bp1, complete sequence	29351-29380	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP042810	Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence	40898-40927	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP021924	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2	156800-156829	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP021512	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence	62528-62557	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_CP021512	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence	89045-89074	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_013210	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence	95075-95104	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NZ_AP014882	Acetobacter pasteurianus NBRC 101655 plasmid plasmid1 DNA, complete genome	135688-135717	9	0.7
NZ_LT960777_1	1.35\|1111976\|30\|NZ_LT960777\|CRISPRCasFinder,PILER-CR	1111976-1112005	30	NC_017136	Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence	94687-94716	9	0.7
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP014885	Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence	21011-21040	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP017381	Lactobacillus plantarum strain TMW 1.1623 plasmid pL11623-2, complete sequence	4338-4367	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP018868	Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence	43326-43355	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP029967	Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence	46215-46244	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	7459-7488	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP035557	Lactobacillus plantarum strain SRCM103297 plasmid unnamed1	49741-49770	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP021933	Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence	53598-53627	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP044413	Lactobacillus sp. JM1 plasmid unnamed1, complete sequence	28673-28702	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_AP014682	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence	11880-11909	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP011537	Lactobacillus fermentum 3872 plasmid pLF3872, complete sequence	19083-19112	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP014891	Lactobacillus backii strain TMW 1.1992 plasmid pL11992-1, complete sequence	25098-25127	10	0.667
NZ_LT960777_1	1.5\|1109995\|30\|NZ_LT960777\|CRISPRCasFinder	1109995-1110024	30	NZ_CP028242	Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence	8952-8981	10	0.667

1. spacer 1.6|1110061|30|NZ_LT960777|CRISPRCasFinder matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 1, identity: 0.967

tgttcaccggtttaaaaaatcccatttaat	CRISPR spacer
tattcaccggtttaaaaaatcccatttaat	Protospacer
*.****************************

2. spacer 1.7|1110127|30|NZ_LT960777|CRISPRCasFinder matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 1, identity: 0.967

tactgatctagaatctgccaataaattagc	CRISPR spacer
tactgatctagaatcagccaataaattagc	Protospacer
*************** **************

3. spacer 1.32|1111778|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 2, identity: 0.933

taaaagaagcttacgatggattagacccca	CRISPR spacer
taaaagaagcttatgaaggattagacccca	Protospacer
*************.** *************

4. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK504446 (Lactobacillus phage SAC12B, complete genome) position: , mismatch: 2, identity: 0.933

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
ctcgcaggctgaatatgacgcattggctga	Protospacer
******.***** *****************

5. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 3, identity: 0.9

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
tgattttgtaaccagcgttattctgtaaac	Protospacer
*.*..*************************

6. spacer 1.16|1110721|30|NZ_LT960777|CRISPRCasFinder matches to MT939240 (Enterococcus phage 9181, complete genome) position: , mismatch: 4, identity: 0.867

ggacaatttggacttacaccgataacacca	CRISPR spacer
gaacaacttggacttacacagataacacta	Protospacer
*.****.************ ********.*

7. spacer 1.33|1111844|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to KX077890 (Streptococcus phage phiLP081102, complete genome) position: , mismatch: 4, identity: 0.867

tagcttttaacggcttcaatgcttggccaa	CRISPR spacer
tagcttttaccgtcttcaatgcttggacca	Protospacer
********* ** ************* * *

8. spacer 1.33|1111844|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to KX077895 (Streptococcus phage phiZJ20091101-4, complete genome) position: , mismatch: 4, identity: 0.867

tagcttttaacggcttcaatgcttggccaa	CRISPR spacer
tagcttttaccgtcttcaatgcttggacca	Protospacer
********* ** ************* * *

9. spacer 1.33|1111844|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to KC413987 (Streptococcus phage phiSS12, complete genome) position: , mismatch: 4, identity: 0.867

tagcttttaacggcttcaatgcttggccaa	CRISPR spacer
tagcttttaccgtcttcaatgcttggacca	Protospacer
********* ** ************* * *

10. spacer 1.33|1111844|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK448987 (Streptococcus phage Javan576, complete genome) position: , mismatch: 4, identity: 0.867

tagcttttaacggcttcaatgcttggccaa	CRISPR spacer
tagcttttaccgtcttcaatgcttggacca	Protospacer
********* ** ************* * *

11. spacer 1.1|1109731|30|NZ_LT960777|CRISPRCasFinder matches to NC_019782 (Lactobacillus phage AQ113, complete genome) position: , mismatch: 6, identity: 0.8

aaaccactttgtaaaatcttcttgaaccgt	CRISPR spacer
aaaccacttagtaaagtcttcttgcgcctg	Protospacer
********* *****.******** .**

12. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 6, identity: 0.8

cattatcgagattttaacaaagatattaaa	CRISPR spacer
gtttatagcgattttaacaaagatattcac	Protospacer
  **** * ****************** *

13. spacer 1.20|1110985|30|NZ_LT960777|CRISPRCasFinder matches to MN693910 (Marine virus AFVG_250M312, complete genome) position: , mismatch: 6, identity: 0.8

tataatctgttgttaaaaatgccattgtta	CRISPR spacer
cataatctgttgataaaaatgcttctgcta	Protospacer
.*********** *********. .**.**

14. spacer 1.27|1111448|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP049227 (Lactobacillus iners strain C0011D1 plasmid pC0011D1, complete sequence) position: , mismatch: 6, identity: 0.8

gccaaatcatttatcttttccaccaaagaa	CRISPR spacer
cccctttcatttatattttccaccaaaaaa	Protospacer
 **   ******** ************.**

15. spacer 1.28|1111514|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 6, identity: 0.8

gatgcggtggtataccaataatacgtttaa	CRISPR spacer
gatgcggtggtatacgaataatgtacttag	Protospacer
*************** ******....***.

16. spacer 1.28|1111514|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK448990 (Streptococcus phage Javan584, complete genome) position: , mismatch: 6, identity: 0.8

gatgcggtggtataccaataatacgtttaa	CRISPR spacer
gatgcggtggtatacgaataatgtacttag	Protospacer
*************** ******....***.

17. spacer 1.28|1111514|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK448812 (Streptococcus phage Javan577, complete genome) position: , mismatch: 6, identity: 0.8

gatgcggtggtataccaataatacgtttaa	CRISPR spacer
gatgcggtggtatacgaataatgtacttag	Protospacer
*************** ******....***.

18. spacer 1.42|1110127|38|NZ_LT960777|CRT matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 6, identity: 0.842

tactgatctagaatctgccaataaattagcgttgaact	CRISPR spacer
tactgatctagaatcagccaataaattagcggaagacg	Protospacer
*************** ***************  ..**

19. spacer 1.1|1109731|30|NZ_LT960777|CRISPRCasFinder matches to NC_019763 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence) position: , mismatch: 7, identity: 0.767

aaaccactttgtaaaatcttcttgaaccgt	CRISPR spacer
tatccactttcttaaatcttcttgaacgac	Protospacer
 * ******* * ************** ..

20. spacer 1.7|1110127|30|NZ_LT960777|CRISPRCasFinder matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tactgatctagaatctgccaataaattagc	CRISPR spacer
caaggatctagaatctgccaagcaattaat	Protospacer
.*  *****************  *****..

21. spacer 1.7|1110127|30|NZ_LT960777|CRISPRCasFinder matches to MH616963 (CrAssphage sp. isolate ctbg_1, complete genome) position: , mismatch: 7, identity: 0.767

tactgatctagaatctgccaataaattagc	CRISPR spacer
tcgtgatatagaatctgctaataaatttta	Protospacer
*  **** **********.********

22. spacer 1.19|1110919|30|NZ_LT960777|CRISPRCasFinder matches to MG592393 (Vibrio phage 1.007.O._10N.261.55.F9, partial genome) position: , mismatch: 7, identity: 0.767

acgtctttaaacggttacccgtagtattca	CRISPR spacer
gcttctttaaacggttagccgcagtactgc	Protospacer
.* ************** ***.****.*

23. spacer 1.21|1111051|30|NZ_LT960777|CRISPRCasFinder matches to NZ_AP017970 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttatgacaatccaattaaacaaatgtttgt	CRISPR spacer
tataaataatccaattaaacaaatttttct	Protospacer
*   .*.***************** *** *

24. spacer 1.30|1111646|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_018066 (Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence) position: , mismatch: 7, identity: 0.767

gtgctcataagcctctaaaaactcaaccaa	CRISPR spacer
ttgctcataagcatctaaaaacttacggac	Protospacer
 *********** **********.*   *

25. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 7, identity: 0.767

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
catccaagctgattaggacacattggcggc	Protospacer
* . *********** ***.******* *

26. spacer 1.41|1110061|38|NZ_LT960777|CRT matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 7, identity: 0.816

tgttcaccggtttaaaaaatcccatttaatgttgaact	CRISPR spacer
tattcaccggtttaaaaaatcccatttaatcaccccct	Protospacer
*.****************************  .   **

27. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 8, identity: 0.733

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gaaccttgtaaccagcgattttcttcggaa	Protospacer
 **************** * **** ...*

28. spacer 1.9|1110259|30|NZ_LT960777|CRISPRCasFinder matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 8, identity: 0.733

tgtcgttgtcccagattgtaataacttctt	CRISPR spacer
cagatttgtcccagattgttataatttcct	Protospacer
..   ************** ****.***.*

29. spacer 1.12|1110457|30|NZ_LT960777|CRISPRCasFinder matches to NZ_AP018258 (Calothrix sp. NIES-4071 plasmid plasmid3 DNA, complete genome) position: , mismatch: 8, identity: 0.733

aatggaatagtttaatttgggatgataaaa	CRISPR spacer
cgcatattatttcaatttgggatgataaaa	Protospacer
 ... * ** **.*****************

30. spacer 1.13|1110523|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP014638 (Vibrio vulnificus strain CECT 4999 plasmid pR99, complete sequence) position: , mismatch: 8, identity: 0.733

ctaaaacggcagtggttaacaatggtttgt	CRISPR spacer
atgtaatggcagtggttaacactggttcta	Protospacer
 *. **.************** *****.

31. spacer 1.13|1110523|30|NZ_LT960777|CRISPRCasFinder matches to NC_009701 (Vibrio vulnificus plasmid pR99, complete sequence) position: , mismatch: 8, identity: 0.733

ctaaaacggcagtggttaacaatggtttgt	CRISPR spacer
atgtaatggcagtggttaacactggttcta	Protospacer
 *. **.************** *****.

32. spacer 1.13|1110523|30|NZ_LT960777|CRISPRCasFinder matches to NC_009703 (Vibrio vulnificus pC4602-2 plasmid) position: , mismatch: 8, identity: 0.733

ctaaaacggcagtggttaacaatggtttgt	CRISPR spacer
atgtaatggcagtggttaacactggttcta	Protospacer
 *. **.************** *****.

33. spacer 1.13|1110523|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP012741 (Vibrio vulnificus strain FORC_017 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ctaaaacggcagtggttaacaatggtttgt	CRISPR spacer
atgtaatggcagtggttaacactggttcta	Protospacer
 *. **.************** *****.

34. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

cattatcgagattttaacaaagatattaaa	CRISPR spacer
aacgttcgacattttaacaaagatattctg	Protospacer
 *.  **** *****************  .

35. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.733

cattatcgagattttaacaaagatattaaa	CRISPR spacer
aacgttcgacattttaacaaagatattccg	Protospacer
 *.  **** *****************  .

36. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.733

cattatcgagattttaacaaagatattaaa	CRISPR spacer
tattatcgagattttaaaaatgatcaggag	Protospacer
.**************** ** ***   .*.

37. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.733

cattatcgagattttaacaaagatattaaa	CRISPR spacer
tattatcgagattttaaaaatgatcaggag	Protospacer
.**************** ** ***   .*.

38. spacer 1.14|1110589|30|NZ_LT960777|CRISPRCasFinder matches to NC_019782 (Lactobacillus phage AQ113, complete genome) position: , mismatch: 8, identity: 0.733

cattatcgagattttaacaaagatattaaa	CRISPR spacer
gtttatcaagatttcaacaaagatacaatg	Protospacer
  *****.******.**********. * .

39. spacer 1.27|1111448|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021878 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed5) position: , mismatch: 8, identity: 0.733

gccaaatcatttatcttttccaccaaagaa	CRISPR spacer
gtcaaatcttttttcttttccaccacctct	Protospacer
*.****** *** ************

40. spacer 1.27|1111448|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021878 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed5) position: , mismatch: 8, identity: 0.733

gccaaatcatttatcttttccaccaaagaa	CRISPR spacer
gtcaaatcttttttcttttccaccacctct	Protospacer
*.****** *** ************

41. spacer 1.40|1109995|38|NZ_LT960777|CRT matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 8, identity: 0.789

taaccttgtaaccagcgttattctgtaaacgttgaact	CRISPR spacer
tgattttgtaaccagcgttattctgtaaacttttcatc	Protospacer
*.*..************************* **  *..

42. spacer 1.67|1111778|38|NZ_LT960777|CRT matches to MN855837 (Bacteriophage sp. isolate 206, complete genome) position: , mismatch: 8, identity: 0.789

taaaagaagcttacgatggattagaccccagttgagcc	CRISPR spacer
taaaagaagcttatgaaggattagaccccaagagtatc	Protospacer
*************.** *************.  * ..*

43. spacer 1.70|1111976|38|NZ_LT960777|CRT matches to MK504446 (Lactobacillus phage SAC12B, complete genome) position: , mismatch: 8, identity: 0.789

ctcgcaagctgattatgacgcattggctgagttgaacc--	CRISPR spacer
ctcgcaggctgaatatgacgcattggctga--caagtctg	Protospacer
******.***** *****************  ..*..*

44. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_AP017932 (Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

45. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP035177 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed3) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

46. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP020098 (Lactobacillus plantarum strain K25 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagctttattcagggcta	Protospacer
  ************** ****** * .

47. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP025208 (Lactobacillus sakei strain WiKim0074 plasmid pLSW74_2, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

48. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP028979 (Lactobacillus plantarum strain LQ80 plasmid pLQ802, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

49. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP046038 (Lactobacillus sakei strain CBA3614 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

50. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP050807 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP511, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagctttattcagggcta	Protospacer
  ************** ****** * .

51. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP040377 (Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

52. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_LT907984 (Lactobacillus sakei subsp. sakei 23K plasmid pJ23A1, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

53. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_LT907987 (Lactobacillus sakei strain T332 plasmid p332A2, complete sequence) position: , mismatch: 9, identity: 0.7

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcagggcta	Protospacer
  ************** ****** * .

54. spacer 1.26|1111382|30|NZ_LT960777|CRISPRCasFinder matches to NC_015270 (Enterococcus phage EFRM31, complete genome) position: , mismatch: 9, identity: 0.7

aagaagaagttgctaaaaaggtcgacgtaa	CRISPR spacer
tgtcgttagttgcttaaaaggtagacgtaa	Protospacer
 .  .  ******* ******* *******

55. spacer 1.27|1111448|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to MK448912 (Streptococcus phage Javan340, complete genome) position: , mismatch: 9, identity: 0.7

gccaaatcatttatcttttccaccaaagaa	CRISPR spacer
ttttgaaattttatcttttccaccaaataa	Protospacer
 .. .*   ****************** **

56. spacer 1.30|1111646|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.7

gtgctcataagcctctaaaaactcaaccaa	CRISPR spacer
aatcttataagcctctaaaaattcaatatt	Protospacer
.  **.***************.****.

57. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021525 (Acetobacter ascendens strain SRCM101447 plasmid pAP1447-1) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

58. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_017130 (Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

59. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_017134 (Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

60. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_017101 (Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

61. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP015165 (Acetobacter ascendens strain LMG 1590 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

62. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_021976 (Acetobacter pasteurianus 386B plasmid Apa386Bp1, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

63. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP042810 (Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

64. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021924 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

65. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021512 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
accgcatgctgattatgacgcatcgaagtt	Protospacer
 .**** ****************.*.

66. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_CP021512 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-3, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

67. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_013210 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

68. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NZ_AP014882 (Acetobacter pasteurianus NBRC 101655 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

69. spacer 1.35|1111976|30|NZ_LT960777|CRISPRCasFinder,PILER-CR matches to NC_017136 (Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence) position: , mismatch: 9, identity: 0.7

ctcgcaagctgattatgacgcattggctga	CRISPR spacer
aacgcatgctgattatgacgcatcgaagtt	Protospacer
  **** ****************.*.

70. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP014885 (Lactobacillus backii strain TMW 1.1991 plasmid pL11991-4, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagctttattcaaggcta	Protospacer
  ************** ****** . .

71. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP017381 (Lactobacillus plantarum strain TMW 1.1623 plasmid pL11623-2, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

72. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP018868 (Lactobacillus alimentarius DSM 20249 plasmid pLDW-11, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

73. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP029967 (Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

74. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gcaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

75. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP035557 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed1) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gcaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

76. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gcaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

77. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP044413 (Lactobacillus sp. JM1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

78. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_AP014682 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-2, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

79. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP011537 (Lactobacillus fermentum 3872 plasmid pLF3872, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

80. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP014891 (Lactobacillus backii strain TMW 1.1992 plasmid pL11992-1, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagctttattcaaggcta	Protospacer
  ************** ****** . .

81. spacer 1.5|1109995|30|NZ_LT960777|CRISPRCasFinder matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.667

taaccttgtaaccagcgttattctgtaaac	CRISPR spacer
gtaccttgtaaccagccttattcaaggcta	Protospacer
  ************** ****** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

68494 : 84986

Streptococcus_phage(38.46%)

integrase

attL 60205:60220|attR 91308:91323

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
60205:60220	attL	NA	NA	NA	NA
WP_099947170.1\|68494_69598_+	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	4.2e-98	47.9
WP_099947171.1\|69599_70385_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_016264359.1\|70476_71046_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011373789.1\|71560_72115_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	8.6e-28	41.8
WP_099947575.1\|72353_73502_-\|integrase	site-specific integrase	J7KBT5	Streptococcus_phage	1.3e-62	40.7
WP_099947576.1\|73561_74584_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	1.7e-82	49.3
WP_099947577.1\|74666_75314_-	helix-turn-helix transcriptional regulator	A0A1W6JQE6	Staphylococcus_phage	7.3e-10	25.9
WP_099947578.1\|75471_75678_+	helix-turn-helix transcriptional regulator	D7RWM4	Brochothrix_phage	2.9e-13	53.8
WP_099947579.1\|75680_75953_+	hypothetical protein	NA	NA	NA	NA
WP_099947580.1\|76308_76563_+	hypothetical protein	NA	NA	NA	NA
WP_099947581.1\|76543_77344_+	bifunctional DNA primase/polymerase	A0A0B5A5U2	Streptococcus_phage	1.0e-37	35.6
WP_099947582.1\|77334_78828_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	3.2e-69	34.9
WP_099947583.1\|79103_79496_+	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	3.2e-13	41.7
WP_099947584.1\|79639_79945_+	hypothetical protein	A0A1X9I5Z6	Streptococcus_phage	3.3e-05	29.3
WP_099947585.1\|80189_80609_+	transcriptional regulator	A0A141E173	Streptococcus_phage	5.2e-09	33.6
WP_011373790.1\|82364_83078_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.0e-41	40.6
WP_011373791.1\|83087_84986_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	6.2e-33	33.2
91308:91323	attR	NA	NA	NA	NA

DBSCAN-SWA_2

559146 : 568761

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056948814.1\|559146_561999_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	4.5e-306	54.9
WP_056948812.1\|562119_562656_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_011374234.1\|562781_563666_+	RNase adapter RapZ	A0A1P8D5W0	Corynebacterium_phage	8.4e-09	31.0
WP_099947265.1\|563662_564697_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.0e-94	54.8
WP_011374236.1\|564699_565644_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.3e-52	39.0
WP_099947267.1\|565735_566191_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_099947627.1\|566304_566829_-	DsbA family protein	NA	NA	NA	NA
WP_004265909.1\|567051_567636_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	5.3e-52	53.9
WP_016264752.1\|568179_568761_-	glycoside hydrolase family 73 protein	A0A0A7RUS8	Clostridium_phage	1.5e-22	44.0

DBSCAN-SWA_3

594973 : 624570

Lactococcus_phage(33.33%)

protease,bacteriocin,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099947630.1\|594973_595321_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_011374266.1\|595497_595632_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_157771044.1\|596279_596981_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_085391658.1\|596982_597729_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_011374270.1\|597894_598038_+	hypothetical protein	NA	NA	NA	NA
WP_011374271.1\|598059_598224_+	hypothetical protein	NA	NA	NA	NA
WP_011374272.1\|598249_598918_+	hypothetical protein	NA	NA	NA	NA
WP_157771045.1\|599764_599932_+	hypothetical protein	NA	NA	NA	NA
WP_011374274.1\|599964_600147_+	hypothetical protein	NA	NA	NA	NA
WP_056947921.1\|600288_600621_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_056947920.1\|600639_600927_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_056947918.1\|600951_601131_+	hypothetical protein	NA	NA	NA	NA
WP_056947916.1\|601159_601396_+	hypothetical protein	NA	NA	NA	NA
WP_035146515.1\|601468_601792_-	hypothetical protein	NA	NA	NA	NA
WP_056947914.1\|601875_602163_+	hypothetical protein	NA	NA	NA	NA
WP_011374281.1\|602332_603373_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	A0A1W6JHY1	Lactococcus_phage	5.1e-13	33.8
WP_076632463.1\|603516_604149_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_056947476.1\|604135_604573_-	hypothetical protein	NA	NA	NA	NA
WP_011374284.1\|604729_606082_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_128522009.1\|606411_606651_+	hypothetical protein	NA	NA	NA	NA
WP_056947471.1\|606688_608470_-	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	NA	NA	NA
WP_056947469.1\|608560_609967_-	C69 family dipeptidase	NA	NA	NA	NA
WP_056947467.1\|610136_610811_+	hypothetical protein	NA	NA	NA	NA
WP_011374312.1\|611238_612276_+	sugar-binding domain-containing protein	NA	NA	NA	NA
WP_011374313.1\|612314_613331_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_011374314.1\|613431_614646_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_011374315.1\|614671_615427_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_011374316.1\|615544_616840_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.2e-167	69.7
WP_011374319.1\|617516_618572_-	DUF3324 domain-containing protein	NA	NA	NA	NA
WP_011374320.1\|618589_619291_-	WxL domain-containing protein	NA	NA	NA	NA
WP_011374321.1\|619271_619628_-	hypothetical protein	NA	NA	NA	NA
WP_099947633.1\|619649_622487_-	hypothetical protein	NA	NA	NA	NA
WP_099947634.1\|622679_623147_+	arginine repressor	NA	NA	NA	NA
WP_035146539.1\|623418_624570_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.1e-22	32.7

DBSCAN-SWA_4

663708 : 672002

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056948306.1\|663708_665004_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	8.0e-16	29.6
WP_011374364.1\|665116_665842_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	E3SPA9	Prochlorococcus_phage	4.1e-38	40.4
WP_011374365.1\|665834_666095_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_056948308.1\|666091_666778_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_056948311.1\|666767_668993_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.8e-151	41.5
WP_011374368.1\|668968_670402_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.5e-51	33.9
WP_056948312.1\|670407_671436_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.9e-65	44.6
WP_056948314.1\|671432_672002_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-24	35.4

DBSCAN-SWA_5

996223 : 1003668

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025015768.1\|996223_997069_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	7.7e-20	44.2
WP_056947598.1\|997265_997766_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	3.5e-28	38.0
WP_056947596.1\|997776_998727_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.7e-122	64.3
WP_056947594.1\|998922_1000812_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.3e-48	29.3
WP_056947593.1\|1000924_1001386_-	hypothetical protein	NA	NA	NA	NA
WP_056947591.1\|1001454_1002648_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A249XS88	Mycobacterium_phage	3.9e-33	33.0
WP_056947589.1\|1002795_1003668_+	YitT family protein	M1Q1P6	Streptococcus_phage	2.8e-57	41.5

DBSCAN-SWA_6

1160143 : 1168669

Enterococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157771046.1\|1160143_1160287_-	hypothetical protein	E3W8I0	Leuconostoc_phage	1.0e-04	64.3
WP_099947669.1\|1160279_1161584_-	Y-family DNA polymerase	Q6DMX4	Streptococcus_phage	2.8e-85	39.9
WP_011374861.1\|1161583_1161829_-	hypothetical protein	NA	NA	NA	NA
WP_056948883.1\|1161848_1162223_-	hypothetical protein	NA	NA	NA	NA
WP_056948015.1\|1162249_1162945_-	LysM peptidoglycan-binding domain-containing protein	A0A096XT26	Enterococcus_phage	5.0e-17	40.3
WP_011374864.1\|1163187_1165230_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	8.9e-70	35.5
WP_011374865.1\|1165387_1165561_+	hypothetical protein	NA	NA	NA	NA
WP_011374866.1\|1165693_1166173_+	nucleoside 2-deoxyribosyltransferase	A0A1D3SPR3	Enterococcus_phage	3.8e-16	37.2
WP_011374867.1\|1166225_1167599_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	5.1e-45	30.4
WP_082268175.1\|1167949_1168669_-	aquaporin family protein	M1HCP3	Acanthocystis_turfacea_Chlorella_virus	2.3e-28	34.1

DBSCAN-SWA_7

1275769 : 1283878

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099947689.1\|1275769_1277515_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.0e-46	27.9
WP_011374970.1\|1277656_1277887_-	YneF family protein	NA	NA	NA	NA
WP_011374971.1\|1277967_1278210_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_011374972.1\|1278344_1278959_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	1.1e-15	58.2
WP_099947690.1\|1279092_1279611_-	adenine phosphoribosyltransferase	A0A2K9L2N8	Tupanvirus	9.6e-13	31.6
WP_099947691.1\|1279634_1281947_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	6.5e-77	31.1
WP_099947692.1\|1282091_1283084_+	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	2.3e-47	36.6
WP_025016401.1\|1283169_1283535_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_016265359.1\|1283551_1283878_+	heavy metal-binding domain-containing protein	M4STD1	Rhodobacter_phage	2.4e-06	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage