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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT996890 Staphylococcus aureus isolate 24117-SCV chromosome I 6 crisprs cas3,WYL,csa3,DEDDh,DinG 5 2 10 1

Results visualization

1. NZ_LT996890
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_1 531619-531697 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_2 618068-618258 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_3 630875-630955 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_4 1731053-1731150 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_5 2395374-2395455 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT996890_6 2481508-2481593 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LT996890_2 2.1|618089|36|NZ_LT996890|CRT 618089-618124 36 NZ_LT996890.1 222939-222974 0 1.0
NZ_LT996890_2 2.1|618089|36|NZ_LT996890|CRT 618089-618124 36 NZ_LT996890.1 580298-580333 0 1.0
NZ_LT996890_2 2.1|618089|36|NZ_LT996890|CRT 618089-618124 36 NZ_LT996890.1 1271734-1271769 0 1.0
NZ_LT996890_2 2.3|618203|35|NZ_LT996890|CRT 618203-618237 35 NZ_LT996890.1 580242-580276 0 1.0
NZ_LT996890_2 2.3|618203|35|NZ_LT996890|CRT 618203-618237 35 NZ_LT996890.1 1443319-1443353 0 1.0
NZ_LT996890_2 2.3|618203|35|NZ_LT996890|CRT 618203-618237 35 NZ_LT996890.1 1715695-1715729 0 1.0
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 311303-311331 0 1.0
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1443373-1443401 0 1.0
NZ_LT996890_2 2.1|618089|36|NZ_LT996890|CRT 618089-618124 36 NZ_LT996890.1 531584-531619 1 0.972
NZ_LT996890_2 2.1|618089|36|NZ_LT996890|CRT 618089-618124 36 NZ_LT996890.1 662367-662402 1 0.972
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 1271905-1271940 1 0.972
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 1690301-1690336 1 0.972
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 1690359-1690394 1 0.972
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1070044-1070072 1 0.966
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1070099-1070127 1 0.966
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1152507-1152535 1 0.966
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 2337928-2337956 1 0.966
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 2393120-2393148 1 0.966
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 2514161-2514189 1 0.966
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 10960-10995 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 98652-98687 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 381891-381926 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 625410-625445 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 2179712-2179747 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 2189120-2189155 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 2393111-2393146 2 0.944
NZ_LT996890_2 2.2|618146|36|NZ_LT996890|CRT 618146-618181 36 NZ_LT996890.1 2514163-2514198 2 0.944
NZ_LT996890_2 2.3|618203|35|NZ_LT996890|CRT 618203-618237 35 NZ_LT996890.1 311012-311046 2 0.943
NZ_LT996890_2 2.3|618203|35|NZ_LT996890|CRT 618203-618237 35 NZ_LT996890.1 2232082-2232116 2 0.943
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 223061-223089 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 408698-408726 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1271856-1271884 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1271914-1271942 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1690310-1690338 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1690368-1690396 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 1881359-1881387 2 0.931
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 NZ_LT996890.1 2179710-2179738 2 0.931
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 11013-11044 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 98603-98634 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 223120-223151 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 307108-307139 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 408521-408552 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 408637-408668 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 1070213-1070244 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 1167669-1167700 2 0.938
NZ_LT996890_6 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder 2481535-2481566 32 NZ_LT996890.1 2337814-2337845 2 0.938

1. spacer 2.1|618089|36|NZ_LT996890|CRT matches to position: 222939-222974, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttgggg	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttgggg	Protospacer
************************************

2. spacer 2.1|618089|36|NZ_LT996890|CRT matches to position: 580298-580333, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttgggg	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttgggg	Protospacer
************************************

3. spacer 2.1|618089|36|NZ_LT996890|CRT matches to position: 1271734-1271769, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttgggg	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttgggg	Protospacer
************************************

4. spacer 2.3|618203|35|NZ_LT996890|CRT matches to position: 580242-580276, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttggc	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttggc	Protospacer
***********************************

5. spacer 2.3|618203|35|NZ_LT996890|CRT matches to position: 1443319-1443353, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttggc	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttggc	Protospacer
***********************************

6. spacer 2.3|618203|35|NZ_LT996890|CRT matches to position: 1715695-1715729, mismatch: 0, identity: 1.0

gcggaaagtcagcttacaataatgtgcaagttggc	CRISPR spacer
gcggaaagtcagcttacaataatgtgcaagttggc	Protospacer
***********************************

7. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 311303-311331, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaaacaatgca	Protospacer
*****************************

8. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1443373-1443401, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaaacaatgca	Protospacer
*****************************

9. spacer 2.1|618089|36|NZ_LT996890|CRT matches to position: 531584-531619, mismatch: 1, identity: 0.972

gcggaaagtcagcttacaataatgtgcaagttgggg	CRISPR spacer
gcggaaagtcagcttacaatagtgtgcaagttgggg	Protospacer
*********************.**************

10. spacer 2.1|618089|36|NZ_LT996890|CRT matches to position: 662367-662402, mismatch: 1, identity: 0.972

gcggaaagtcagcttacaataatgtgcaagttgggg	CRISPR spacer
gcggaaagtcagctaacaataatgtgcaagttgggg	Protospacer
************** *********************

11. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 1271905-1271940, mismatch: 1, identity: 0.972

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcaagttggggt	Protospacer
****** *****************************

12. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 1690301-1690336, mismatch: 1, identity: 0.972

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcaagttggggt	Protospacer
****** *****************************

13. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 1690359-1690394, mismatch: 1, identity: 0.972

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcaagttggggt	Protospacer
****** *****************************

14. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1070044-1070072, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaagcaatgca	Protospacer
*********************.*******

15. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1070099-1070127, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaagcaatgca	Protospacer
*********************.*******

16. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1152507-1152535, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

17. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 2337928-2337956, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

18. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 2393120-2393148, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

19. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 2514161-2514189, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

20. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 10960-10995, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcgagttggggt	Protospacer
****** *******************.*********

21. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 98652-98687, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcgagttggggt	Protospacer
****** *******************.*********

22. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 381891-381926, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcgagttggggt	Protospacer
****** *******************.*********

23. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 625410-625445, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcgagttggggt	Protospacer
****** *******************.*********

24. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 2179712-2179747, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaggaaattctacagacaatgcaagttggggt	Protospacer
****** ************.****************

25. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 2189120-2189155, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacaggcaatgcgagttggggt	Protospacer
****** *******************.*********

26. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 2393111-2393146, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacagacaatgcaagttggggt	Protospacer
****** ************.****************

27. spacer 2.2|618146|36|NZ_LT996890|CRT matches to position: 2514163-2514198, mismatch: 2, identity: 0.944

tcgaaatgaaattctacaggcaatgcaagttggggt	CRISPR spacer
tcgaaaagaaattctacagacaatgcaagttggggt	Protospacer
****** ************.****************

28. spacer 2.3|618203|35|NZ_LT996890|CRT matches to position: 311012-311046, mismatch: 2, identity: 0.943

gcggaaagtcagcttacaataatgtgcaagttggc	CRISPR spacer
gcgaaaagtcagcttacaaaaatgtgcaagttggc	Protospacer
***.*************** ***************

29. spacer 2.3|618203|35|NZ_LT996890|CRT matches to position: 2232082-2232116, mismatch: 2, identity: 0.943

gcggaaagtcagcttacaataatgtgcaagttggc	CRISPR spacer
gcggaaagtcagcatacaataacgtgcaagttggc	Protospacer
************* ********.************

30. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 223061-223089, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

31. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 408698-408726, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

32. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1271856-1271884, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

33. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1271914-1271942, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

34. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1690310-1690338, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

35. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1690368-1690396, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

36. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 1881359-1881387, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcaaaaagaaattctacagacaatgca	Protospacer
****.***************.********

37. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to position: 2179710-2179738, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaggaaattctacagacaatgca	Protospacer
********.***********.********

38. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 11013-11044, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

39. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 98603-98634, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

40. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 223120-223151, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

41. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 307108-307139, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

42. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 408521-408552, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

43. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 408637-408668, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

44. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 1070213-1070244, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

45. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 1167669-1167700, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgc	Protospacer
******* ************ ***********

46. spacer 6.1|2481535|32|NZ_LT996890|CRISPRCasFinder matches to position: 2337814-2337845, mismatch: 2, identity: 0.938

agctgaccaaaagtcagctttcaataatgtgc	CRISPR spacer
agctggccaatagtcagctttcaataatgtgc	Protospacer
*****.**** *********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT996890_3 3.1|630901|29|NZ_LT996890|CRISPRCasFinder 630901-630929 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
NZ_LT996890_5 5.1|2395399|32|NZ_LT996890|CRISPRCasFinder 2395399-2395430 32 KM359505 Prochlorococcus phage P-TIM68, complete genome 102705-102736 8 0.75

1. spacer 3.1|630901|29|NZ_LT996890|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
cacttagaagaaatcctacaaacaatgca	Protospacer
. .. *.*******.**************

2. spacer 5.1|2395399|32|NZ_LT996890|CRISPRCasFinder matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 8, identity: 0.75

ggtctgtagaatttcttttcgaaattctctgt	CRISPR spacer
gatctgtataatttcttttggaaatagttaat	Protospacer
*.****** ********** *****  *. .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 398570 : 407043 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_2 427215 : 481177 52 Streptococcus_phage(28.57%) transposase,bacteriocin,protease NA
DBSCAN-SWA_3 659321 : 673996 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 685967 : 693787 10 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_5 2129460 : 2135139 6 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_6 2229194 : 2275955 45 Staphylococcus_phage(86.67%) tRNA,protease NA
DBSCAN-SWA_7 2285146 : 2321628 40 Staphylococcus_phage(93.94%) protease NA
DBSCAN-SWA_8 2457357 : 2466400 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_9 2534254 : 2542584 7 Caulobacter_phage(16.67%) tRNA NA
DBSCAN-SWA_10 2601405 : 2687921 104 Staphylococcus_phage(81.01%) holin,terminase,head,tail,tRNA,portal,plate,integrase,capsid,protease attL 2602872:2602889|attR 2649318:2649335
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_LT996890.1|WP_000031108.1|2231578_2231731_+|hypothetical-protein 2231578_2231731_+ 50 aa aa NA NA NA 2229194-2275955 yes