CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483298	Streptococcus pyogenes strain NCTC8225 chromosome 1	2 crisprs	DEDDh,cas3,DinG,csa3	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483298_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483298_1

495697-495782

Orphan

Consensus_repeat	Method
GATGACATCCCGTCGATTAAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483298_1

>merge|NZ_LS483298|1|495697-495782|CRISPRCasFinder
GATGACATCCCGTCGATTAAACAGTCGTTTGATGACCTAAAAAATAAGATTAATGAGACGGTCGATGACATCCCGTCAATTAAACA

>NZ_LS483298|1|1|495697-495782|CRISPRCasFinder
GATGACATCCCGTCGATTAAACA	GTCGTTTGATGACCTAAAAAATAAGATTAATGAGACGGTC
GATGACATCCCGTCAATTAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483298.1\|WP_002983439.1\|487598_487958_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002983481.1\|503455_503635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_111680780.1\|496328_497450_+\|hyaluronoglucosaminidase	unknown	unknown	gnl\|CDD\|369263
NZ_LS483298.1\|WP_002983447.1\|489400_493426_+\|tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
NZ_LS483298.1\|WP_000639437.1\|486975_487254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002983441.1\|487969_488569_+\|phage-major-tail-protein,-TP901-1-family	unknown	unknown	gnl\|CDD\|273986
NZ_LS483298.1\|WP_002983449.1\|493437_494280_+\|phage-tail-family-protein	unknown	unknown	gnl\|CDD\|177320
NZ_LS483298.1\|WP_002983467.1\|499492_499924_+\|DUF1617-family-protein	unknown	unknown	gnl\|CDD\|285058
NZ_LS483298.1\|WP_002983485.1\|504590_505748_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_LS483298.1\|WP_002983479.1\|502594_503389_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|164869
NZ_LS483298.1\|WP_002983445.1\|489152_489386_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_111680781.1\|497462_499481_+\|gp58-like-family-protein	unknown	unknown	gnl\|CDD\|369586
NZ_LS483298.1\|WP_002983429.1\|485709_486597_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002983483.1\|503879_504416_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_LS483298.1\|WP_002983431.1\|486608_486965_+\|phage-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|377467
NZ_LS483298.1\|WP_111680778.1\|488622_489078_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222837
NZ_LS483298.1\|WP_002983486.1\|505763_506060_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|225350
NZ_LS483298.1\|WP_050317072.1\|487250_487595_+\|HK97-gp10-family-phage-protein	unknown	unknown	gnl\|CDD\|273775
NZ_LS483298.1\|WP_002983470.1\|499926_500559_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002983475.1\|500569_501025_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377457

Protein	Function_ID	Function_description	E-value
NZ_LS483298.1\|WP_111680780.1\|496328_497450_+\|hyaluronoglucosaminidase	gnl\|CDD\|369263	pfam07212, Hyaluronidase_1, Hyaluronidase protein (HylP). This family consists of several phage associated hyaluronidase proteins (EC:3.2.1.35) which seem to be specific to Streptococcus pyogenes and Streptococcus pyogenes bacteriophages. The substrate of hyaluronidase is hyaluronic acid, a sugar polymer composed of alternating N-acetylglucosamine and glucuronic acid residues. Hyaluronic acid is found in the ground substance of human connective tissue and the vitreous of the eye and also is the sole component of the capsule of group A streptococci. The capsule has been shown to be an important virulence factor of this organism by virtue of its ability to resist phagocytosis. Production by S. pyogenes of both a hyaluronic acid capsule and hyaluronidase enzymatic activity capable of destroying the capsule is an interesting, yet-unexplained, phenomenon.	1.48265e-159
NZ_LS483298.1\|WP_002983447.1\|489400_493426_+\|tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	2.62182e-16
NZ_LS483298.1\|WP_002983441.1\|487969_488569_+\|phage-major-tail-protein,-TP901-1-family	gnl\|CDD\|273986	TIGR02126, Major_tail_protein., phage major tail protein, TP901-1 family. This family includes the members of pfam06199 but is broader. Characterized members are major tail proteins from various phage, including lactococcal temperate bacteriophage TP901-1. [Mobile and extrachromosomal element functions, Prophage functions].	5.72039e-41
NZ_LS483298.1\|WP_002983449.1\|493437_494280_+\|phage-tail-family-protein	gnl\|CDD\|177320	PHA01795, PHA01795, hypothetical protein.	6.84658e-176
NZ_LS483298.1\|WP_002983467.1\|499492_499924_+\|DUF1617-family-protein	gnl\|CDD\|285058	pfam07761, DUF1617, Protein of unknown function (DUF1617). This is a family of sequences from hypothetical bacterial and bacteriophage proteins. The region in question is approximately 150 residues long and is highly conserved throughout the family.	9.12496e-73
NZ_LS483298.1\|WP_002983485.1\|504590_505748_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	0
NZ_LS483298.1\|WP_111680781.1\|497462_499481_+\|gp58-like-family-protein	gnl\|CDD\|369586	pfam07902, Gp58, gp58-like protein. Sequences found in this family are derived from a number of bacteriophage and prophage proteins. They are similar to gp58, a minor structural protein of Lactococcus delbrueckii bacteriophage LL-H.	0
NZ_LS483298.1\|WP_050317072.1\|487250_487595_+\|HK97-gp10-family-phage-protein	gnl\|CDD\|273775	TIGR01725, hypothetical_protein, phage protein, HK97 gp10 family. This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions].	5.66113e-06
NZ_LS483298.1\|WP_002983483.1\|503879_504416_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	7.13164e-51
NZ_LS483298.1\|WP_002983431.1\|486608_486965_+\|phage-head-tail-connector-protein	gnl\|CDD\|377467	pfam05135, Phage_connect_1, Phage gp6-like head-tail connector protein. This family of proteins contain head-tail connector proteins related to gp6 from bacteriophage HK97. A structure of this protein shows similarity to gp15 a well characterized connector component of bacteriophage SPP1.	1.79605e-07
NZ_LS483298.1\|WP_111680778.1\|488622_489078_+\|hypothetical-protein	gnl\|CDD\|222837	PHA01794, PHA01794, hypothetical protein.	1.34689e-51
NZ_LS483298.1\|WP_002983486.1\|505763_506060_+\|YlxR-family-protein	gnl\|CDD\|225350	COG2740, COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination [Transcription].	1.80877e-33
NZ_LS483298.1\|WP_002983479.1\|502594_503389_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|164869	PHA01790, PHA01790, streptodornase.	7.71061e-29
NZ_LS483298.1\|WP_002983475.1\|500569_501025_+\|phage-holin-family-protein	gnl\|CDD\|377457	pfam05105, Phage_holin_4_1, Bacteriophage holin family. Phage holins and lytic enzymes are both necessary for bacterial lysis and virus dissemination. This family also includes TcdE/UtxA involved in toxin secretion in Clostridium difficile. The 1.E.10 family is represented by Bacillus subtilis phi29 holin; 1.E.16 represents the Cph1 holin; and the 1.E.19 family is represented by the Clostridium difficile TcdE holin. Toxigenic strains of C. difficile produce two large toxins (TcdA and TcdB) encoded within a pathogenicity locus. tcdE, encoded between tcdA and tcdB, encodes a 166 aa protein which causes death to E. coli when expressed, and the structure of TcdE resembles holins. TcdE acts on the bacterial membrane. Since TcdA and TcdB lack signal peptides, they may be released via TcdE either prior to or subsequent to cell lysis.	4.28603e-20

>NZ_LS483298.1|WP_002983449.1|493437_494280_+|phage-tail-family-protein
MDLLIEKESQATRLSDFGIYNIAIEDSAPLLSVSHRAVKGRSGYIYDGATFTTKTLKVKGRVTVSDVEGLLDKQDELNALLVVDEPFYVTKMYPENSDLFNFELPGESTGDLQLIGSPHKPWKYRFKVILDDTINYEFIGKTSQGLKYNLSFTLRTAELPFGETKPKDITLSGGSFAYGGTAKASQLEWPFIIELTPSGGQTNFYIEIDGRRFEFKQNSQLQNSDKLLLTGISTTLNGNYINAKTNYEYFIFNPNPNKRITYKTDFLGTIRILNFVELYK
>NZ_LS483298.1|WP_002983447.1|489400_493426_+|tape-measure-protein
MPGTFDGSIFADVGANTKDYEQAMARIVSTTQNAFRKAQDTAVNSSNKMVQIIGQIMAQLANNGESLGKRLGSAYATGLKLSIGEIQRIAASIGEKIPEPIKNGFNKAFSIIQNSVQKLSSAIPHPIKSAFTSATSAVVSFSSKITSAVSAAFNSVSSKASTVADKISSSFGGRITSAVTNLATKLSTGLSNGFSRMSSSAATSLNGISQKFANTSSAGERLKSTVMSIVQAFSLMAVAQKAMHAITGAIDGAVSRVDTMNRFPKTMALFGYSAEQSKASIDKLSKGIEGLPTPLDSAVKSAQQLAITTGSLDKGTSLALAFNNAMIGYGATTEGAEQALRQFNQSLGSGKIQAEEFNSVSEAAPGLMSKMAEAFGFGKNGVQDLKSALSDGKITAQEFADKMIELNDAQGGFAEMAQSSAGGIRTAWKNVHTAVVKGVAGMISAFDEAAKANGMKTIAETLLSLKPAITSVFDTINSLIPNAVAAFARLKQSINIDFSPLGASVKEVFALINTVLGDFAHTGELSGQIFDKLKAKIASLAPKVIALWAVMNPASAIATIMPLLSLFGKVGLALGSLGTSVGAFGGIISSGIASASGVVGAFAATLSGLPGVFATAAGRGLSVLGTMTSAMSSLVSLALAAIGPAAILGLVVAGLGLINSQFGAQIDQLLNTAVTKGPGIIQGLVKGITSKIPALIASGTQLIAKFANAITVLLPVIIQAGVQLITSLVKGIGQNATSLISSAIKIIGSFVSSIVSALPQLISVGMELLLNVVNGIVQNIPLIIQQAQQIIDSFGNSLQASLPSIISNGIAILVNLVQGITQMLPTVLQIATQVITSFVSGIVQFLPQLLQGGIQIIISLVQGIIQNLPQIVQSAVQIIQSLVSGLTQALPQIIAAGIQLVVQLAVALIKGLPQIISAGIQLIMGLGKAMLEAIPNALSGVWEGIKSGFSSMWDQITGKSSTSTAKVSADATAMALNVGTQTTAMANQANTNTTSMLNSISQNTELANINATTQAQEMASGVNGATSSMNLDAINHTLSLASGVGANMGTASTSATSQAQAMSSGVSNSLASMQSNSTKAASGLSNSVTSEMSSAATSAASSANKLSSAVESGFNKAKTSATTSMNGIANAVKTGFSSINSTAKQSMANLVSSVTSGMSRATAVSNNACQKILSIFRALAGQMSSAGAYAGQGFANGLASSAGTIYAIANSIAANVAATIRRALDIHSPSRVTKTLGAFTGEGFALGMAEWIGEINSLGQAYATAVTDQNWGVNSTVSTSAKVNNSGINTSLDNLSEEVRQSQLSEPVFEVHNEIVGDKIYTAVKEKESREQSKDSYFVFA
>NZ_LS483298.1|WP_002983445.1|489152_489386_+|hypothetical-protein
MEGLEYKQVAERENLSELSLKLRYTLNAKKVDVGKLKYDKHRLTIKRSYQKASRSQADSDSSIVERIQMLNNHFQNR
>NZ_LS483298.1|WP_111680778.1|488622_489078_+|hypothetical-protein
MEFTAAKRNIDIKFDFKTMFKINNKLGTINPETGERNADGVGALFFNILEHNESAIVDLVRLSAGSGKKALTEDEILDAIAEAVDEEGTTEGLFAEIEKEMVDSGFFRAKILKYIENMEKSARYLKAKDDTDATQIQIIEDMIGRMSNAVS
>NZ_LS483298.1|WP_002983441.1|487969_488569_+|phage-major-tail-protein,-TP901-1-family
MANTKEGTTIEITTGKPIVGKKIFYFIQSVDAKKGSKALLPAYRTDGTTTMGGEYIDEQTQQGRVIEKATDEHSIDLTTYFVPTDPSVAVIEEAKKTGKSIKIWEVIADESVKEQIQIPESSGPKKDVYPAKFGYAKIDEIERGTGISDLVEMSYTANIVGALQDGKFPLTKEEIEMLENVYGYQNPGDTTGDYDNITK
>NZ_LS483298.1|WP_002983439.1|487598_487958_+|hypothetical-protein
MDYSPETLYLKKVKNRLGVLDIPIYFKLPKSDVLEPFIVVGTNISDLSKTAQTGAVIDDFSLNIDAFLPGDSRLDAEEIKARMLRLLGRNNQIKAQILVDNSIGREVYRVAINITETLF
>NZ_LS483298.1|WP_050317072.1|487250_487595_+|HK97-gp10-family-phage-protein
MSLIYRMRGLDRFLRSVERKQKSVRIAVDKELSKSAARIERQAKILAPVDTGWLRAQIYNEQQQLLHYRVVSPALYSVYIELGTRKMEAQPFLDPALRKEWPVLMANLKKMFKR
>NZ_LS483298.1|WP_000639437.1|486975_487254_+|hypothetical-protein
MIYKDRVILVYVDEQDDFLDKRTVEKPSGKIPCMENTFTKSEQMGLFGKYDLNAFKLHLQGHYDGFSKIIYKGKPRLIKGLAHHKNSTVIYV
>NZ_LS483298.1|WP_002983431.1|486608_486965_+|phage-head-tail-connector-protein
MGDKQLIDDIKLFIGISKGDGAQDELITLAISESKERVLAKLNEYSETEITKIPDRLRFIVRDVAIKRFNRINSEGTVEDSEEGKTFKWDSYLKEYESTLRSAAIGKVYSGKGVARFI
>NZ_LS483298.1|WP_002983429.1|485709_486597_+|hypothetical-protein
MAEKNLNTMADLGDIKSIDFVNKFSKNINDLLKLLGVTRRETLTNDLKIQTYKWEVTLDQTDPGEGETIPLSKVTRTKDKDYTVKWFKKRRATTAEAIARHGAARAITEADKRIMRELQNGIKDAFFTFLKTKPTKVKGVGLQKALSASWAKLATFNEFEGSPLVSFVSPLDVANYLGDTKVGADASNVFGMTLLKNFLGMQNVIVMPSVPEGKIYSTAVENLVFASLNVKGGDLGGLFADFTDETGLIAAARNRQLSNLTYESVFFGANVLFAEIPEGVVEATIEAAAVPGIGG
>NZ_LS483298.1|WP_111680780.1|496328_497450_+|hyaluronoglucosaminidase
MAENIPLRVQFKRMKAAEWARSNVVLLEGEIGFETDTGFAKFGDGQNTFSKLKYLTGPKGPKGDTGLQGKTGGTGPRGPAGKPGTTDYDQLQNKPDLGAFAQKEETNSKITKLESSKADKNAVYLKAESNAKLDEKLSLTGGIVTGQLQFKPNSGIKPSSSVGGAINIDMSKSEGAAMVMYTNKDTTDGPLMILRSDKDTFNQSVQFVDYKGTTNAVNIVMRQPTTPNFSSALNITSANQGGSAMQIRGIERKLGTLKITHENPSVEADYDEDAAALSIDIVKKQEGGGNGTAAQGIYINSTSGTTGKLLRIRNLNDDKFYVNPDGGFYAKETSQIDGNLKLKDPIANDHAATKAYVDGEVEKLKALLTAKQM
>NZ_LS483298.1|WP_111680781.1|497462_499481_+|gp58-like-family-protein
MSRDPTLTLDESNLTIGSDGRAYYTFTADDNTKSVKIANDKCIGTTRFNQLMIERGDKPTNYVAPVVVEGTGNPTGLFKDLKELNLELTDTANSQLWAKIKLNNHGMLQTYFDTTIKNEILTTARGIRETISDTERGLKSEFLKTVQGQRIQLESLLEQKTAQLGLTVDGLRLDLNKAGKQTASLQASIEGLRQDYKDADRKLSSSYQAGIEGLKAAMRDDKLGLQSEIQATARGLSQEYDDKLHQLSAKIKTTSSGTTEAYENKLEGLRAEFTRSNQGMRVELESKISGLQSTQQATARQISQEISNREGAVSRVQQDLESYQRRLQDAEDNYSSLTHTVRGLQSDVGSPTGKIQSRLTQLAGQIEQRVTRDGVMSIISGAGDSIKLAIQKAGGINAKMSGNEIISAINLNSYGVTIAGKHIALDGNTTVNGTFTTKIAEAIKIRADQIIAGTIDAARIRVINLNASSIVGLDANFIKAKIGYAITDLLEGKVIKARNGAMLIDLSSAKMDFNSNATINFNSRDNALVRRDDTHTAFVHFSNATPKGYTGSALYAAIGITLSGDGVNSASSGRFAGMRCFRHATGYNHTAAVDQTEIYGDSVLIADDFSINRGFKFRPDKMTKVLDMNDLYAAVVALGRCWKHLTNVGWNTAHSNFTNAVTNELNNHINKI
>NZ_LS483298.1|WP_002983467.1|499492_499924_+|DUF1617-family-protein
MDLTLKNKELNTLYRVLDKIKITNMRANRGRAKLLAKVVDKINEYAKDETDLIDMYAAKDKDDKFVIDEHKNIKLADPAKLDELNDLLNELADEEIVIKGGEYSKRFIDFLNFLEECEDEFTSSEIILIDNILEQFEESKKGE
>NZ_LS483298.1|WP_002983470.1|499926_500559_+|hypothetical-protein
MKTLTLSGKPYPIHEDGKVVKTEVRLIGDNGLFIPIELIGDQTAKGADDLIKEGLDAFVREYVTKYAVAESVQKVEELSLAQKEIEQNAEQAKVTAEAAEKQAKSLELVIAKSQKMANLQAIHLLTSGSKVEPDIYKGLLELIEPAKQGEYQAYDVFTVVDESHEDQAGEGNLVFVHVNEPFTYEAQTIEDLESEDKVTVIKYADLVKQD
>NZ_LS483298.1|WP_002983475.1|500569_501025_+|phage-holin-family-protein
MIIDLTSLIHLFGDLIRTVEIHVFTLFVCFDIITGLTKGITNKRANSTKGLSGIIKHFLVVLLVYTVYPYLILLGAKPLAVAFVLFFIACYGISIVENWGQLGLPMPSFVRAFFEKLKRDTDQFDIATIKIDKTGVKLEAPQVDLKQKEEE
>NZ_LS483298.1|WP_002983479.1|502594_503389_+|DNA/RNA-non-specific-endonuclease
MNNIRLRKFISSIFLILLISSPISLSYQQATLADTKEVNVANRYNSSDTYLPEALSWTLETSPNYYKVLGESGIVENLFPPKGQIVYGGLDSLGRTLTVRGTLTFNNVLGSYNIRKDFKRSKAETLSGWLGNKNGEVYVIKGLGDDSYQGYFWNKSHLIADSLGGDALRVNAITGTRTQNVGGRSGNGGMRYTEIKSQKWLEAHRDGYLYYEAMPIYQGNELVPRAVVVSVLSSDNTINEKVIVYNVANGYTIDYNQGTFSANQ
>NZ_LS483298.1|WP_002983481.1|503455_503635_+|hypothetical-protein
MLTYDEFKQAIDRGYIVEDTVTIVRKNGQIFDYVLPHEKVKNGEVVTDEKVEEVLMELE
>NZ_LS483298.1|WP_002983483.1|503879_504416_+|ribosome-maturation-factor-RimP
MDSQEPIILEKSIKIEEVIKIANTSIIDIVTKTVTPEIKAPYELVDVEYDKMGSDYILSILVDKEGGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQGDLLAFDGETLTIDYLDKTRHKIVNIPYQAVAKVRMAVKL
>NZ_LS483298.1|WP_002983485.1|504590_505748_+|transcription-termination/antitermination-protein-NusA
MSKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFTVREVVEEVFDSRLEISLKDALAISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRRQMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQLSHQDQIPGETFKSHDRIDVYVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSHNPNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNAIAPAEVDMVLFDDEDLKRATVVVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDRLEAEKEAATVVEEPVVDDVMTAEEV
>NZ_LS483298.1|WP_002983486.1|505763_506060_+|YlxR-family-protein
MSKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMAKKKQVFNRSFSMDIPESFYDDLIAYVDHKIKRRELGLD

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Crispr_ID: NZ_LS483298_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483298_2

944506-944606

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483298_2

>merge|NZ_LS483298|2|944506-944606|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGGTATAATTAGACTATACCAATTAT

>NZ_LS483298|2|2|944506-944606|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483298.1\|WP_111680850.1\|937938_941049_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
NZ_LS483298.1\|WP_032467272.1\|937382_937754_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_LS483298.1\|WP_002984447.1\|942204_943707_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_LS483298.1\|WP_002984453.1\|946667_947003_+\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_LS483298.1\|WP_011285611.1\|933327_934128_-\|streptodornase-Sda3	unknown	unknown	gnl\|CDD\|372824
NZ_LS483298.1\|WP_002984455.1\|947109_947751_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_LS483298.1\|WP_002984457.1\|947760_948390_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_LS483298.1\|WP_002989607.1\|935144_935759_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_LS483298.1\|WP_002984460.1\|948405_949242_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NZ_LS483298.1\|WP_002984451.1\|944657_946472_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_LS483298.1\|WP_002984462.1\|949610_950384_+\|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl\|CDD\|369335
NZ_LS483298.1\|WP_002984437.1\|936684_937383_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LS483298.1\|WP_002984426.1\|934365_934554_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002984444.1\|941128_942142_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_LS483298.1\|WP_002984469.1\|956639_956888_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LS483298.1\|WP_002984467.1\|953959_956278_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_LS483298.1\|WP_002984465.1\|952108_953431_-\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_LS483298.1\|WP_011017829.1\|950753_951989_-\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_LS483298.1\|WP_002984433.1\|935889_936675_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483298.1\|WP_002984449.1\|943924_944482_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044

Protein	Function_ID	Function_description	E-value
NZ_LS483298.1\|WP_111680850.1\|937938_941049_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_LS483298.1\|WP_032467272.1\|937382_937754_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.32055e-48
NZ_LS483298.1\|WP_002984447.1\|942204_943707_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_LS483298.1\|WP_002984453.1\|946667_947003_+\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	1.37463e-64
NZ_LS483298.1\|WP_011285611.1\|933327_934128_-\|streptodornase-Sda3	gnl\|CDD\|372824	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease.	7.11109e-26
NZ_LS483298.1\|WP_002984455.1\|947109_947751_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.36474e-71
NZ_LS483298.1\|WP_002984457.1\|947760_948390_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
NZ_LS483298.1\|WP_002989607.1\|935144_935759_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
NZ_LS483298.1\|WP_002984460.1\|948405_949242_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.79673e-109
NZ_LS483298.1\|WP_002984451.1\|944657_946472_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_LS483298.1\|WP_002984462.1\|949610_950384_+\|CAMP-factor-pore-forming-toxin-Cfa	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	3.19117e-97
NZ_LS483298.1\|WP_002984437.1\|936684_937383_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
NZ_LS483298.1\|WP_002984444.1\|941128_942142_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_LS483298.1\|WP_002984469.1\|956639_956888_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NZ_LS483298.1\|WP_002984467.1\|953959_956278_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483298.1\|WP_002984465.1\|952108_953431_-\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_LS483298.1\|WP_011017829.1\|950753_951989_-\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	4.75704e-95
NZ_LS483298.1\|WP_002984449.1\|943924_944482_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38

>NZ_LS483298.1|WP_002984449.1|943924_944482_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NZ_LS483298.1|WP_002984447.1|942204_943707_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NZ_LS483298.1|WP_002984444.1|941128_942142_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NZ_LS483298.1|WP_111680850.1|937938_941049_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDAKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKENEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NZ_LS483298.1|WP_032467272.1|937382_937754_-|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQYVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NZ_LS483298.1|WP_002984437.1|936684_937383_-|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NZ_LS483298.1|WP_002984433.1|935889_936675_-|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NZ_LS483298.1|WP_002989607.1|935144_935759_+|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>NZ_LS483298.1|WP_002984426.1|934365_934554_+|hypothetical-protein
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDYIK
>NZ_LS483298.1|WP_011285611.1|933327_934128_-|streptodornase-Sda3
MSKSNRRTWQGLVVILIAILTTFTTSTVTAARKIRNFPDTTEILLGTKATETPGILPFTGSYQLVLGDLDNLQRPTFAHIQLKDQDEPNIKRKGLKFNPPGWHNYKLTDANGKTTWLMDRGHLVGYQFSGLNDEPKNLVTMTKYLNTGFSDKNPLGMLYYENRLDSWLALHPNFWLDYKVTPVYHKNELVPRQVVLQYVGIDENGDLLQIKLGSEKESVDNFGVTSVTLDNVSPLAELDYQTGMMLDSTQNEEDSNLETEEFEEAA
>NZ_LS483298.1|WP_002984451.1|944657_946472_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NZ_LS483298.1|WP_002984453.1|946667_947003_+|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVFDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NZ_LS483298.1|WP_002984455.1|947109_947751_+|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NZ_LS483298.1|WP_002984457.1|947760_948390_+|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NZ_LS483298.1|WP_002984460.1|948405_949242_+|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>NZ_LS483298.1|WP_002984462.1|949610_950384_+|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NZ_LS483298.1|WP_011017829.1|950753_951989_-|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMILEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLVDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>NZ_LS483298.1|WP_002984465.1|952108_953431_-|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNESVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NZ_LS483298.1|WP_002984467.1|953959_956278_+|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALSLNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANSLGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NZ_LS483298.1|WP_002984469.1|956639_956888_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

96129 : 106253

Streptococcus_phage(50.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032463306.1\|96129_96789_-	helix-turn-helix transcriptional regulator	A0A1W6JQE6	Staphylococcus_phage	1.6e-12	29.7
WP_021775568.1\|96951_97152_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_021775570.1\|97169_97793_+	hypothetical protein	A0A1W6JPC3	Staphylococcus_phage	2.2e-40	43.3
WP_000648623.1\|97819_98062_+	hypothetical protein	NA	NA	NA	NA
WP_011285318.1\|98304_98487_+	hypothetical protein	NA	NA	NA	NA
WP_021775546.1\|98498_98831_+	hypothetical protein	NA	NA	NA	NA
WP_172450317.1\|98827_98968_+	hypothetical protein	NA	NA	NA	NA
WP_111680741.1\|98948_99146_+	hypothetical protein	NA	NA	NA	NA
WP_003058810.1\|99157_99487_+	hypothetical protein	NA	NA	NA	NA
WP_001100459.1\|99489_99762_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
WP_023609951.1\|99762_100629_+	primase C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	4.0e-120	73.1
WP_111680742.1\|100640_102035_+	virulence-associated protein E	A0A1W6JQD6	Staphylococcus_phage	7.7e-49	38.1
WP_022555265.1\|102327_102582_+	hypothetical protein	NA	NA	NA	NA
WP_022555266.1\|102578_102752_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	5.6e-10	57.9
WP_022555267.1\|102757_102940_+	hypothetical protein	NA	NA	NA	NA
WP_111680743.1\|103013_103502_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.3e-48	58.0
WP_111680744.1\|103888_104251_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_111680745.1\|104993_106253_-\|tRNA	tyrosine--tRNA ligase	A0A1S6UA79	Serratia_phage	1.5e-72	40.7

DBSCAN-SWA_2

173223 : 255028

Streptococcus_phage(41.67%)

tRNA,protease,portal,integrase,terminase,holin,capsid,tail,head

attL 191496:191513|attR 236070:236087

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002986372.1\|173223_175725_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.7
WP_002986370.1\|176031_177465_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002986367.1\|177535_177814_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002986362.1\|177936_178422_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002986359.1\|178512_179175_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_002987909.1\|179179_180043_+	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_002987910.1\|180044_180749_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_172450320.1\|181073_182720_+	transcription antiterminator	NA	NA	NA	NA
WP_002986347.1\|182972_184064_+	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
WP_002986345.1\|184552_185749_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.0e-30	39.2
WP_002986341.1\|185764_187492_+	ABC transporter permease/substrate binding protein	NA	NA	NA	NA
WP_002986338.1\|187622_190265_+	DNA polymerase I	A0A142F1Q9	Bacillus_phage	2.5e-64	35.9
WP_002986334.1\|190451_190907_+	CoA-binding protein	NA	NA	NA	NA
WP_002986328.1\|190958_191426_+	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
191496:191513	attL	NA	NA	NA	NA
WP_002986324.1\|191528_192392_-	DUF975 family protein	NA	NA	NA	NA
WP_002986319.1\|192610_193753_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.9e-86	43.9
WP_002986316.1\|193970_194282_+	hypothetical protein	NA	NA	NA	NA
WP_002986314.1\|194285_194825_+	biotin transporter BioY	NA	NA	NA	NA
WP_002986311.1\|194964_195744_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_002992549.1\|195743_196259_+	nucleoside deaminase	NA	NA	NA	NA
WP_002986305.1\|196872_198105_-	S-layer protein/peptidoglycan endo-beta-N-acetylglucosaminidase	NA	NA	NA	NA
WP_111680920.1\|198480_199182_-\|integrase	site-specific integrase	A0A141E0H2	Streptococcus_phage	1.6e-82	65.4
WP_002986291.1\|199749_200283_-	hypothetical protein	A0A1S5SAH9	Streptococcus_phage	1.3e-20	55.3
WP_002986288.1\|200294_200675_-	hypothetical protein	Q938N7	Temperate_phage	1.4e-40	64.0
WP_032467305.1\|200684_201035_-	helix-turn-helix transcriptional regulator	A0A1S5SFC6	Streptococcus_phage	4.8e-32	60.3
WP_002986282.1\|201345_201561_+	hypothetical protein	M1Q1B4	Streptococcus_phage	2.2e-24	78.6
WP_002986270.1\|201765_202509_+	ORF6C domain-containing protein	A3F617	Streptococcus_phage	1.5e-120	86.1
WP_002986266.1\|202584_202797_+	hypothetical protein	NA	NA	NA	NA
WP_002986264.1\|202830_203022_+	hypothetical protein	NA	NA	NA	NA
WP_002986261.1\|203053_203209_+	hypothetical protein	NA	NA	NA	NA
WP_002986259.1\|203210_203753_-	hypothetical protein	NA	NA	NA	NA
WP_002986256.1\|203883_204144_+	hypothetical protein	A0A1S5SAL2	Streptococcus_phage	1.1e-28	73.3
WP_002986254.1\|204162_204351_+	hypothetical protein	NA	NA	NA	NA
WP_111680752.1\|204337_205684_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	9.3e-209	84.9
WP_002986249.1\|205670_206273_+	hypothetical protein	A0A1P8VVT8	Streptococcus_phage	1.7e-106	93.0
WP_002986245.1\|206250_206997_+	conserved phage C-terminal domain-containing protein	A0A1P8VVR3	Streptococcus_phage	2.2e-135	96.8
WP_002986242.1\|206997_207822_+	ATP-binding protein	A0A1P8VVV9	Streptococcus_phage	1.4e-127	79.6
WP_002986238.1\|207821_208049_+	hypothetical protein	C5J991	Streptococcus_phage	7.1e-13	50.7
WP_032467330.1\|208062_208239_+	hypothetical protein	NA	NA	NA	NA
WP_002986233.1\|208235_208520_+	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.9e-41	93.6
WP_050452837.1\|208522_209161_+	DNA cytosine methyltransferase	A0A140HLV8	Bacillus_phage	2.7e-65	65.6
WP_002986227.1\|209148_209304_+	hypothetical protein	A0A1S5SFL7	Streptococcus_phage	1.6e-08	60.5
WP_002986215.1\|210330_210663_+	hypothetical protein	A0A1S5SCX1	Streptococcus_phage	1.2e-32	57.4
WP_002986212.1\|210655_210985_+	helix-turn-helix transcriptional regulator	A0A1P8VVV5	Streptococcus_phage	3.2e-22	45.5
WP_002986209.1\|210981_211155_+	hypothetical protein	A0A1J0MGB9	Staphylococcus_phage	1.1e-05	46.9
WP_002986206.1\|211157_211406_+	hypothetical protein	NA	NA	NA	NA
WP_002986201.1\|211590_211740_+	hypothetical protein	NA	NA	NA	NA
WP_002986198.1\|211708_211909_+	hypothetical protein	NA	NA	NA	NA
WP_002986196.1\|211932_212352_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SF97	Streptococcus_phage	1.1e-19	42.0
WP_032467304.1\|212446_213010_+\|integrase	site-specific integrase	A0A1S5SCL7	Streptococcus_phage	5.4e-62	61.5
WP_002986191.1\|213181_213475_+	hypothetical protein	NA	NA	NA	NA
WP_002986189.1\|213471_213801_+	HNH endonuclease	A0A1S7FZ53	Listeria_phage	6.7e-20	49.5
WP_002986187.1\|213922_214270_+	hypothetical protein	E2ELI1	Clostridium_phage	4.0e-07	34.5
WP_002986185.1\|214250_215909_+\|terminase	terminase large subunit	E2ELI2	Clostridium_phage	4.0e-129	44.4
WP_002986182.1\|216107_217343_+\|portal	phage portal protein	A0A1S7FYX7	Listeria_phage	3.6e-74	37.6
WP_002986180.1\|217346_218063_+\|protease	Clp protease ClpP	D2XR17	Bacillus_phage	1.4e-38	42.9
WP_002986177.1\|218098_219292_+\|capsid	phage major capsid protein	A0A1B1P752	Bacillus_phage	1.7e-41	30.8
WP_002986176.1\|219306_219594_+	hypothetical protein	NA	NA	NA	NA
WP_002986174.1\|219613_219907_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_111680753.1\|219908_220286_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_002986170.1\|220257_220629_+	hypothetical protein	NA	NA	NA	NA
WP_002986168.1\|220637_221060_+	hypothetical protein	A0A1S7FZ20	Listeria_phage	3.1e-25	48.5
WP_002986166.1\|221070_221658_+	hypothetical protein	A0A1B1P778	Bacillus_phage	1.1e-28	36.4
WP_002986164.1\|221678_222050_+	hypothetical protein	NA	NA	NA	NA
WP_002986162.1\|222085_222244_+	hypothetical protein	NA	NA	NA	NA
WP_002986160.1\|222317_225719_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	9.5e-93	58.8
WP_111680754.1\|225718_226426_+\|tail	phage tail family protein	A0A1B1P761	Bacillus_phage	1.3e-28	35.2
WP_002986155.1\|226422_228471_+\|tail	phage tail protein	Q938K1	Temperate_phage	2.2e-121	44.0
WP_111680755.1\|228470_229493_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	2.5e-158	87.0
WP_111680756.1\|229503_231519_+	gp58-like family protein	Q938J9	Temperate_phage	3.4e-183	75.0
WP_002987513.1\|231530_231962_+	DUF1617 family protein	Q938J8	Temperate_phage	1.1e-73	100.0
WP_111680757.1\|231964_232582_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	2.8e-80	90.2
WP_111680758.1\|232591_233047_+\|holin	phage holin family protein	A0A0M4R3G6	Streptococcus_phage	2.6e-62	80.1
WP_002986150.1\|233158_234364_+	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	3.1e-208	84.5
WP_032467302.1\|234479_235652_-	streptodornase Sda1	A7J2B8	Streptococcus_phage	1.4e-75	49.5
WP_002986147.1\|235890_236073_+	hypothetical protein	A3F673	Streptococcus_phage	1.1e-19	80.0
WP_002986145.1\|236122_236314_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
236070:236087	attR	NA	NA	NA	NA
WP_002986141.1\|236986_237691_+	streptococcal pyrogenic exotoxin SpeG	NA	NA	NA	NA
WP_011888573.1\|238146_239496_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_002986134.1\|239843_241352_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002986126.1\|242039_242711_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002986125.1\|242809_243709_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	9.6e-77	52.2
WP_002986123.1\|243741_244758_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_002986120.1\|245055_245505_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_002986117.1\|245497_247204_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-36	26.9
WP_002986115.1\|247206_248991_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.3e-44	28.1
WP_002986113.1\|249108_249876_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_002986111.1\|249985_250432_+	dUTP diphosphatase	A0A1P8BLJ0	Lactococcus_phage	4.5e-35	52.8
WP_002986109.1\|250512_251874_+	DNA repair protein RadA	NA	NA	NA	NA
WP_002993284.1\|252062_252560_+	carbonic anhydrase	NA	NA	NA	NA
WP_002986107.1\|252690_253401_+	TIGR00266 family protein	NA	NA	NA	NA
WP_002986105.1\|253582_255028_+\|tRNA	glutamate--tRNA ligase	A0A2K9L481	Tupanvirus	6.8e-08	31.2

DBSCAN-SWA_3

449019 : 509236

Streptococcus_phage(79.17%)

tRNA,terminase,portal,holin,capsid,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002983351.1\|449019_450297_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.7e-93	52.0
WP_002983353.1\|450688_451048_-	DUF956 family protein	NA	NA	NA	NA
WP_002983356.1\|451161_452073_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_002983360.1\|452089_452899_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_002983363.1\|452987_453980_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_111680773.1\|454331_455144_-	HAD family phosphatase	NA	NA	NA	NA
WP_002983366.1\|455408_456869_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.9e-37	29.3
WP_002983367.1\|457022_457484_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_002983369.1\|457458_457983_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002983372.1\|457991_459275_+	LCP family protein	NA	NA	NA	NA
WP_002983373.1\|459385_459742_-	hypothetical protein	NA	NA	NA	NA
WP_002983376.1\|459738_460158_-	HIT family protein	NA	NA	NA	NA
WP_002983379.1\|460229_460955_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.9e-20	28.0
WP_002983381.1\|460957_461992_+	ABC transporter permease	NA	NA	NA	NA
WP_002983385.1\|462055_462847_+	phosphotransferase family protein	NA	NA	NA	NA
WP_002983387.1\|462846_463482_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_111680774.1\|464879_465737_-	DNA adenine methylase	A0A2H4UUI2	Bodo_saltans_virus	9.9e-15	29.3
WP_111680775.1\|465793_467497_-	AAA family ATPase	NA	NA	NA	NA
WP_002983397.1\|467621_468008_-	ImmA/IrrE family metallo-endopeptidase	Q7Y4M1	Streptococcus_phage	1.3e-38	58.4
WP_002983399.1\|468011_468359_-	helix-turn-helix transcriptional regulator	A0A126GGQ7	Streptococcus_phage	1.5e-41	73.5
WP_002983400.1\|468651_468861_+	helix-turn-helix transcriptional regulator	M1Q1B4	Streptococcus_phage	7.7e-14	53.6
WP_032467257.1\|468919_469195_+	DNA-binding phage protein	A7J272	Streptococcus_phage	1.7e-45	95.6
WP_002983403.1\|469191_469362_+	hypothetical protein	A7J273	Streptococcus_phage	2.0e-20	89.3
WP_002983404.1\|469354_469561_+	hypothetical protein	NA	NA	NA	NA
WP_002983405.1\|469557_469941_+	hypothetical protein	A7J274	Streptococcus_phage	7.2e-66	100.0
WP_002983406.1\|469937_470090_+	hypothetical protein	A7J275	Streptococcus_phage	4.4e-19	100.0
WP_002983407.1\|470086_470290_+	hypothetical protein	A7J276	Streptococcus_phage	9.4e-33	100.0
WP_002983408.1\|470377_470677_+	hypothetical protein	A7J277	Streptococcus_phage	1.0e-38	92.9
WP_002983409.1\|470676_471834_+	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	1.7e-219	99.7
WP_111680776.1\|471847_472411_+	DUF2815 family protein	D2J040	Enterococcus_phage	1.9e-51	58.5
WP_002983411.1\|472453_474385_+	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	87.8
WP_002983412.1\|474389_476774_+	DNA primase	A7J282	Streptococcus_phage	8.8e-287	97.6
WP_002983413.1\|477140_477416_+	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	8.6e-45	96.7
WP_111680777.1\|477412_478735_+	DEAD/DEAH box helicase family protein	A7J284	Streptococcus_phage	1.3e-252	97.7
WP_002983415.1\|478735_478897_+	hypothetical protein	A7J285	Streptococcus_phage	1.2e-22	94.3
WP_032467258.1\|478899_479166_+	hypothetical protein	A7J287	Streptococcus_phage	7.3e-17	60.0
WP_002983418.1\|479298_479712_+	transcriptional regulator	A7J289	Streptococcus_phage	5.8e-45	64.2
WP_032467259.1\|479807_480260_+\|terminase	terminase small subunit	A7J290	Streptococcus_phage	1.0e-71	93.3
WP_002983420.1\|480249_481527_+\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	3.5e-242	98.1
WP_002983421.1\|481541_483074_+\|portal	phage portal protein	A7J292	Streptococcus_phage	4.3e-287	98.2
WP_002983422.1\|483033_484479_+\|capsid	minor capsid protein	A7J293	Streptococcus_phage	4.5e-270	96.7
WP_002983423.1\|484509_484698_+	hypothetical protein	A7J294	Streptococcus_phage	1.4e-22	98.4
WP_002983424.1\|484700_484967_+	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.1e-33	85.2
WP_002983425.1\|485127_485697_+	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	1.0e-79	97.4
WP_002983429.1\|485709_486597_+	hypothetical protein	A7J297	Streptococcus_phage	2.1e-161	100.0
WP_002983431.1\|486608_486965_+\|head,tail	phage head-tail connector protein	A7J298	Streptococcus_phage	2.5e-57	98.3
WP_000639437.1\|486975_487254_+	hypothetical protein	A7J299	Streptococcus_phage	4.2e-47	98.9
WP_050317072.1\|487250_487595_+	HK97 gp10 family phage protein	A7J2A0	Streptococcus_phage	5.1e-55	96.5
WP_002983439.1\|487598_487958_+	hypothetical protein	A7J2A1	Streptococcus_phage	2.1e-59	100.0
WP_002983441.1\|487969_488569_+\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	2.2e-93	100.0
WP_111680778.1\|488622_489078_+	hypothetical protein	A7J2A3	Streptococcus_phage	3.1e-76	99.3
WP_002983445.1\|489152_489386_+	hypothetical protein	A7J2A4	Streptococcus_phage	4.4e-34	100.0
WP_002983447.1\|489400_493426_+	tape measure protein	A7J2A5	Streptococcus_phage	5.5e-241	98.9
WP_002983449.1\|493437_494280_+\|tail	phage tail family protein	A7J2A6	Streptococcus_phage	5.5e-159	98.6
WP_111680779.1\|494289_496329_+\|tail	phage tail protein	A7J2A7	Streptococcus_phage	0.0e+00	91.1
WP_111680780.1\|496328_497450_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.6e-126	71.2
WP_111680781.1\|497462_499481_+	gp58-like family protein	Q938J9	Temperate_phage	6.1e-172	69.4
WP_002983467.1\|499492_499924_+	DUF1617 family protein	Q938J8	Temperate_phage	1.3e-63	89.5
WP_002983470.1\|499926_500559_+	hypothetical protein	Q938J7	Temperate_phage	4.3e-47	51.9
WP_002983475.1\|500569_501025_+\|holin	phage holin family protein	A0A0M4R3G6	Streptococcus_phage	3.0e-63	81.5
WP_002983479.1\|502594_503389_+	DNA/RNA non-specific endonuclease	A7J2B8	Streptococcus_phage	8.9e-26	35.6
WP_002983481.1\|503455_503635_+	hypothetical protein	A3F673	Streptococcus_phage	5.2e-19	79.7
WP_002983483.1\|503879_504416_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_002983485.1\|504590_505748_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_002983486.1\|505763_506060_+	YlxR family protein	NA	NA	NA	NA
WP_002983488.1\|506052_506355_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_002983491.1\|506374_509236_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	4.5e-19	25.2

DBSCAN-SWA_4

748136 : 853285

103

Erysipelothrix_phage(35.29%)

protease,transposase,terminase,portal,integrase,holin,capsid,tail,head

attL 740958:740973|attR 851547:851562

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
740958:740973	attL	NA	NA	NA	NA
WP_002984013.1\|748136_748832_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002987363.1\|750216_751530_-	chloride channel protein	NA	NA	NA	NA
WP_002987365.1\|751504_752464_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	3.7e-127	70.5
WP_002984018.1\|752796_754956_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	8.6e-265	64.0
WP_002989242.1\|754975_755194_-	redoxin NrdH	A0A249XUR7	Enterococcus_phage	1.1e-13	49.3
WP_002984031.1\|755586_755850_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_002984033.1\|755854_757588_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_002984035.1\|757772_759200_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_032467267.1\|759294_760569_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_111680795.1\|760679_761765_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.2e-33	32.6
WP_002984060.1\|761862_762489_+	uridine kinase	A0A1V0SAA3	Catovirus	2.2e-35	39.7
WP_002984063.1\|762568_762832_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_002984066.1\|762884_763694_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_002987482.1\|763888_765022_+\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_009881127.1\|765163_765661_+	GAF domain-containing protein	NA	NA	NA	NA
WP_111680796.1\|765660_767331_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.3e-47	41.5
WP_172450324.1\|767425_767629_+	DUF3272 domain-containing protein	NA	NA	NA	NA
WP_002984078.1\|767603_768545_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
WP_002984080.1\|768748_771127_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_002989292.1\|771663_772860_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.5e-138	65.4
WP_002984086.1\|773033_774293_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_002984090.1\|774649_775387_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002984095.1\|775624_776167_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002984098.1\|776175_777459_+	CBS domain-containing protein	NA	NA	NA	NA
WP_002984100.1\|777474_778335_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_002984102.1\|778336_779302_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_002984103.1\|779412_780696_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_002984106.1\|780688_781180_+	shikimate kinase	NA	NA	NA	NA
WP_002984109.1\|781387_782839_+	LCP family protein	NA	NA	NA	NA
WP_111680797.1\|782887_784288_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	2.8e-256	97.6
WP_111680798.1\|784423_785242_+	hypothetical protein	NA	NA	NA	NA
WP_070606647.1\|785299_786274_+	DNA cytosine methyltransferase	V5URQ5	Oenococcus_phage	2.9e-103	60.6
WP_063633225.1\|786310_786853_-	Bsp6I family type II restriction endonuclease	NA	NA	NA	NA
WP_036755888.1\|786856_787078_-	helix-turn-helix domain-containing protein	A0A2K5B263	Erysipelothrix_phage	7.2e-18	59.2
WP_070606650.1\|787089_789669_-	NACHT domain-containing protein	NA	NA	NA	NA
WP_111680922.1\|790161_790779_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_019116101.1\|790871_791066_+	hypothetical protein	NA	NA	NA	NA
WP_111680799.1\|791068_791347_+	hypothetical protein	S5M5X1	Brevibacillus_phage	1.4e-07	58.8
WP_111680800.1\|791339_792479_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	2.2e-166	75.1
WP_111680801.1\|792480_793029_+	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	9.9e-85	83.1
WP_172450325.1\|793208_795197_+	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	1.8e-272	69.0
WP_172450326.1\|795292_795439_+	hypothetical protein	NA	NA	NA	NA
WP_111680802.1\|795413_796088_+	Rha family transcriptional regulator	A0A2K5B268	Erysipelothrix_phage	9.7e-82	63.0
WP_092086173.1\|796080_796458_+	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	1.7e-27	51.3
WP_111680803.1\|796444_798682_+	primase C-terminal domain-containing protein	A0A1B0RXC5	Streptococcus_phage	9.7e-195	46.6
WP_111680804.1\|798805_799087_+	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	2.6e-20	56.7
WP_111680805.1\|799067_800411_+	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	3.1e-172	73.9
WP_111680806.1\|800459_800930_+	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	1.3e-19	40.8
WP_111680807.1\|801042_801402_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	2.3e-34	53.8
WP_026064997.1\|801535_802108_+\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	1.3e-42	46.9
WP_019116087.1\|802113_802896_+	S-adenosylmethionine synthetase	NA	NA	NA	NA
WP_172450334.1\|803675_804845_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-50	52.2
WP_111680808.1\|805634_807227_+	DNA cytosine methyltransferase	A0A1P8DJM9	Virus_Rctr41k	1.7e-31	37.6
WP_111680809.1\|807301_807940_+	virulence protein	A0A2K5B280	Erysipelothrix_phage	2.1e-49	49.8
WP_111680810.1\|807941_808172_+	DUF4314 domain-containing protein	A0A2K5B281	Erysipelothrix_phage	1.5e-18	62.9
WP_111680811.1\|808161_808335_+	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_111680812.1\|808441_808687_+	hypothetical protein	NA	NA	NA	NA
WP_111680813.1\|808688_808967_+	hypothetical protein	NA	NA	NA	NA
WP_111680814.1\|809055_810648_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	4.5e-263	81.8
WP_111680815.1\|810773_810983_+	hypothetical protein	NA	NA	NA	NA
WP_111680816.1\|811049_812378_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	3.1e-172	71.4
WP_172450327.1\|812295_813036_+\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	8.2e-66	60.9
WP_111680817.1\|813041_814223_+\|capsid	phage major capsid protein	M1Q1R5	Streptococcus_phage	8.7e-102	49.9
WP_111680818.1\|814245_814524_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B0RXE3	Streptococcus_phage	2.2e-11	43.5
WP_111680819.1\|814523_814856_+\|head	phage head closure protein	NA	NA	NA	NA
WP_028077999.1\|814852_815233_+	HK97 gp10 family phage protein	Q6DMT7	Streptococcus_phage	2.8e-14	38.5
WP_111680820.1\|815225_815558_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	1.8e-20	45.5
WP_111680821.1\|815547_816138_+\|tail	phage tail protein	A0A0U4JWV5	Exiguobacterium_phage	2.5e-41	49.5
WP_111680822.1\|816149_816515_+	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	3.8e-08	34.2
WP_111680823.1\|817039_818383_+	MATE family efflux transporter	NA	NA	NA	NA
WP_111680824.1\|818464_821290_+\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	1.7e-58	39.0
WP_111680825.1\|821292_821964_+	hypothetical protein	A0A2K9V3E8	Faecalibacterium_phage	7.5e-18	29.7
WP_111680826.1\|821964_824790_+\|tail	phage tail protein	H7BV46	unidentified_phage	1.5e-115	30.4
WP_111680827.1\|824801_824984_+	hypothetical protein	NA	NA	NA	NA
WP_111680828.1\|824964_825240_+	toxin	NA	NA	NA	NA
WP_111680829.1\|825251_825548_+	hypothetical protein	NA	NA	NA	NA
WP_111680830.1\|825547_825763_+	hypothetical protein	NA	NA	NA	NA
WP_111680831.1\|826381_826906_+	hypothetical protein	NA	NA	NA	NA
WP_063633073.1\|826907_827318_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	5.2e-46	67.6
WP_111680832.1\|827310_828297_+	N-acetylmuramoyl-L-alanine amidase	A0A2K9V338	Faecalibacterium_phage	3.5e-48	54.0
WP_111680833.1\|828472_828883_+	helix-turn-helix domain-containing protein	A0A1B0RXC6	Streptococcus_phage	6.4e-20	41.4
WP_111680834.1\|828869_829082_+	hypothetical protein	NA	NA	NA	NA
WP_111680835.1\|829143_830709_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	2.6e-138	49.4
WP_111680836.1\|830705_831116_+	hypothetical protein	A0A2K5B2B3	Erysipelothrix_phage	2.2e-20	39.0
WP_111680837.1\|831118_832705_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	1.1e-152	61.7
WP_172450334.1\|832879_834049_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-50	52.2
WP_111680838.1\|834345_835338_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_172450328.1\|835498_837253_+	ABC transporter ATP-binding protein	F2Y352	Organic_Lake_phycodnavirus	4.0e-26	35.1
WP_111680840.1\|837236_838958_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-28	26.3
WP_111680841.1\|838968_839550_+	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_111680842.1\|839549_840239_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_111680843.1\|840232_841597_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.4e-18	34.1
WP_002984115.1\|843178_843580_+	PaaI family thioesterase	NA	NA	NA	NA
WP_011888813.1\|843684_845169_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_011284908.1\|845542_846763_+	MFS transporter	NA	NA	NA	NA
WP_002984124.1\|846882_847248_-	thioesterase family protein	NA	NA	NA	NA
WP_014407646.1\|847362_848094_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_172450329.1\|848110_848434_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1P8CWQ3	Bacillus_phage	3.3e-19	46.2
WP_002987502.1\|848479_848833_-\|transposase	transposase	A0A0C5AEB1	Paenibacillus_phage	1.6e-06	30.8
WP_002987505.1\|848865_849159_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_002984130.1\|849236_850547_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
WP_002992869.1\|850770_851643_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
851547:851562	attR	NA	NA	NA	NA
WP_168389357.1\|851942_853285_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.8e-63	49.4

DBSCAN-SWA_5

886172 : 968079

101

Streptococcus_phage(38.71%)

tRNA,transposase,integrase,terminase,holin,capsid,tail,head

attL 886035:886094|attR 934629:934724

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
886035:886094	attL	NA	NA	NA	NA
WP_002984265.1\|886172_887261_-\|integrase	site-specific integrase	A0A097PAS9	Streptococcus_pyogenes_phage	4.2e-204	99.4
WP_002984270.1\|887510_888320_-	type II toxin-antitoxin system PemK/MazF family toxin	J7KDP1	Streptococcus_phage	3.8e-24	35.8
WP_002984272.1\|888332_889070_-	helix-turn-helix domain-containing protein	A0A1S5S8T5	Streptococcus_phage	2.7e-77	63.9
WP_021340823.1\|889229_889376_+	hypothetical protein	NA	NA	NA	NA
WP_023605145.1\|889372_889855_-	hypothetical protein	NA	NA	NA	NA
WP_002984281.1\|889928_890156_+	hypothetical protein	A0A141E1R7	Streptococcus_phage	2.9e-14	57.3
WP_011017884.1\|890263_890773_-	hypothetical protein	NA	NA	NA	NA
WP_002984292.1\|891031_891241_-	hypothetical protein	NA	NA	NA	NA
WP_002984301.1\|891413_891650_-	hypothetical protein	NA	NA	NA	NA
WP_032461902.1\|891774_891960_+	helix-turn-helix transcriptional regulator	J7KH19	Streptococcus_phage	4.7e-23	85.2
WP_014411880.1\|892038_892350_+	hypothetical protein	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
WP_012560974.1\|892616_892796_+	hypothetical protein	A0A1X9I5M8	Streptococcus_phage	1.2e-12	65.5
WP_000370473.1\|892968_893241_+	hypothetical protein	NA	NA	NA	NA
WP_000568478.1\|893230_893611_-	hypothetical protein	NA	NA	NA	NA
WP_012560973.1\|893666_894110_+	hypothetical protein	NA	NA	NA	NA
WP_021340639.1\|894225_895029_+	DnaD domain protein	A0A2P0VI76	Streptococcus_phage	2.4e-63	53.8
WP_021341158.1\|895015_895798_+	ATP-binding protein	A0A097PAQ0	Streptococcus_pyogenes_phage	2.7e-144	98.1
WP_011018145.1\|895788_895926_+	hypothetical protein	J7KBQ4	Streptococcus_phage	2.7e-07	78.4
WP_021341157.1\|895936_896293_+	HTH domain-containing protein	A0A097PAU3	Streptococcus_pyogenes_phage	3.0e-50	99.2
WP_011018143.1\|896273_896528_+	hypothetical protein	Q938N0	Temperate_phage	3.7e-42	98.8
WP_111680846.1\|896549_897032_+	siphovirus Gp157 family protein	Q938M9	Temperate_phage	1.6e-49	98.8
WP_111680847.1\|897032_897707_+	ERF family protein	Q938M8	Temperate_phage	1.3e-102	96.4
WP_021340323.1\|897699_898119_+	single-stranded DNA-binding protein	Q938M7	Temperate_phage	1.5e-69	96.4
WP_011106686.1\|898124_898328_+	hypothetical protein	Q938M6	Temperate_phage	4.7e-32	100.0
WP_011285574.1\|898327_898768_+	RusA family crossover junction endodeoxyribonuclease	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
WP_111680848.1\|898764_899121_+	hypothetical protein	A0A097PAU4	Streptococcus_pyogenes_phage	1.4e-58	96.6
WP_020905119.1\|899347_899632_+	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	2.0e-49	98.9
WP_047235252.1\|899628_899898_+	hypothetical protein	Q938M2	Temperate_phage	2.5e-41	87.6
WP_011889038.1\|900098_900383_+	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.0e-37	88.3
WP_011017571.1\|900386_900869_+	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.6e-92	98.8
WP_002987468.1\|901059_901461_+	hypothetical protein	NA	NA	NA	NA
WP_002987471.1\|901460_902096_+	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	5.5e-87	67.9
WP_003052405.1\|902364_902802_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	3.6e-77	100.0
WP_172450334.1\|903010_904180_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-50	52.2
WP_011284864.1\|905206_906121_+	hypothetical protein	NA	NA	NA	NA
WP_002990048.1\|906210_906423_-	hypothetical protein	NA	NA	NA	NA
WP_002987543.1\|906739_907117_-	type II toxin-antitoxin system HicB family antitoxin	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
WP_001132273.1\|907168_907354_-	type II toxin-antitoxin system HicA family toxin	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
WP_047235590.1\|907416_907884_+\|terminase	terminase small subunit	A0A141E1Y3	Streptococcus_phage	1.9e-52	70.8
WP_047235253.1\|907861_909169_+\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	8.5e-183	75.0
WP_172450334.1\|910042_911212_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-50	52.2
WP_002984371.1\|912146_913772_+\|head	phage head morphogenesis protein	U6E9F1	Streptococcus_phage	1.1e-46	43.8
WP_010922213.1\|913762_913942_+	hypothetical protein	NA	NA	NA	NA
WP_002984375.1\|914001_914271_+	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.3e-34	84.1
WP_011017861.1\|914366_914546_+	hypothetical protein	M1NRK8	Streptococcus_phage	2.6e-18	79.7
WP_002984380.1\|914660_914909_+	hypothetical protein	NA	NA	NA	NA
WP_002984382.1\|914910_915654_+	phage repressor protein/antirepressor Ant	M1PKL6	Streptococcus_phage	5.3e-73	56.9
WP_002984384.1\|915765_916299_+	DUF4355 domain-containing protein	A0A141E0S7	Streptococcus_phage	1.4e-14	83.9
WP_002984386.1\|916308_916689_+	phage protein	A0A0K2CNR0	Brevibacillus_phage	5.2e-08	37.9
WP_002984388.1\|916688_917765_+\|capsid	major capsid protein	A0A2H4J022	uncultured_Caudovirales_phage	5.5e-103	56.0
WP_002984390.1\|917774_918017_+	hypothetical protein	NA	NA	NA	NA
WP_002984392.1\|918030_918384_+\|head,tail	phage head-tail connector protein	A0A2H4J002	uncultured_Caudovirales_phage	9.7e-25	49.6
WP_002984393.1\|918380_918689_+	hypothetical protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
WP_002984399.1\|918669_919035_+	HK97 gp10 family phage protein	A0A097BY98	Enterococcus_phage	7.7e-17	46.3
WP_002984401.1\|919031_919421_+	hypothetical protein	Q38611	Lactococcus_phage	3.5e-44	68.2
WP_164552684.1\|919430_920078_+\|tail	phage major tail protein, TP901-1 family	D7RWD5	Brochothrix_phage	1.4e-40	52.0
WP_002984405.1\|920130_920490_+	hypothetical protein	D7RWD6	Brochothrix_phage	4.3e-20	44.5
WP_002984407.1\|920531_920861_+	hypothetical protein	A0A1P8BLR3	Lactococcus_phage	2.0e-11	41.5
WP_047235256.1\|920875_924142_+	tape measure protein	U6E979	Streptococcus_phage	1.6e-04	30.4
WP_002984411.1\|924173_924953_+\|tail	phage tail family protein	A3F655	Streptococcus_phage	1.9e-68	55.5
WP_111677295.1\|924949_927001_+\|tail	phage tail protein	A3F656	Streptococcus_phage	0.0e+00	84.6
WP_047235257.1\|926997_928005_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.4e-137	71.7
WP_002987337.1\|928017_929928_+	gp58-like family protein	Q938J9	Temperate_phage	6.0e-121	71.3
WP_002987333.1\|929941_930103_+	hypothetical protein	NA	NA	NA	NA
WP_111680849.1\|930105_930723_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	9.5e-76	87.3
WP_002987582.1\|930732_931008_+	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_003058873.1\|931004_931232_+\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_002984418.1\|931347_932553_+	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	2.7e-207	84.5
WP_011017966.1\|932622_933057_-	hypothetical protein	NA	NA	NA	NA
WP_011285611.1\|933327_934128_-	streptodornase Sda3	NA	NA	NA	NA
WP_002984426.1\|934365_934554_+	hypothetical protein	A3F673	Streptococcus_phage	1.3e-20	83.1
WP_002989607.1\|935144_935759_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
934629:934724	attR	NA	NA	NA	NA
WP_002984433.1\|935889_936675_-	hypothetical protein	NA	NA	NA	NA
WP_002984437.1\|936684_937383_-	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
WP_032467272.1\|937382_937754_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_111680850.1\|937938_941049_+	DNA polymerase III subunit alpha	A0A0K1Y8F0	Streptomyces_phage	8.3e-120	29.4
WP_002984444.1\|941128_942142_+	6-phosphofructokinase	NA	NA	NA	NA
WP_002984447.1\|942204_943707_+	pyruvate kinase	NA	NA	NA	NA
WP_002984449.1\|943924_944482_+	signal peptidase I	NA	NA	NA	NA
WP_002984451.1\|944657_946472_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	5.2e-98	38.9
WP_002984453.1\|946667_947003_+	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_002984455.1\|947109_947751_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002984457.1\|947760_948390_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-27	35.5
WP_002984460.1\|948405_949242_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002984462.1\|949610_950384_+	CAMP factor pore-forming toxin Cfa	NA	NA	NA	NA
WP_011017829.1\|950753_951989_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_002984465.1\|952108_953431_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_002984467.1\|953959_956278_+	DNA helicase PcrA	A7KV33	Bacillus_phage	1.6e-131	41.2
WP_002984469.1\|956639_956888_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_002984470.1\|956924_957536_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_002984473.1\|957546_957735_+	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_002984475.1\|957747_958287_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002984476.1\|958327_958528_+	CsbD family protein	J7KJ36	Streptococcus_phage	1.8e-07	50.0
WP_002994467.1\|958538_959027_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002984480.1\|959189_959831_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002984482.1\|959973_960516_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002989664.1\|960633_961335_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.9e-36	37.0
WP_002984487.1\|964078_964675_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_002984488.1\|964685_965642_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_002984490.1\|965738_967079_+	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_002984492.1\|967194_968079_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA

DBSCAN-SWA_6

1277158 : 1287761

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002985123.1\|1277158_1278301_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	4.1e-24	27.0
WP_032467286.1\|1278535_1278976_+	membrane protein	NA	NA	NA	NA
WP_002985132.1\|1280361_1281714_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	24.0
WP_002985134.1\|1281934_1282276_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
WP_002985136.1\|1282336_1283503_-	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
WP_002985140.1\|1283596_1284283_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_002985142.1\|1284279_1285443_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_011054348.1\|1285550_1287761_+	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-268	69.1

DBSCAN-SWA_7

1507649 : 1564656

Streptococcus_phage(35.29%)

transposase,bacteriocin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002985729.1\|1507649_1507850_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_002992018.1\|1507862_1508090_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002987564.1\|1509314_1509497_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_002985741.1\|1510702_1511179_-	NUDIX hydrolase	NA	NA	NA	NA
WP_002985743.1\|1511199_1512096_-	GTPase Era	NA	NA	NA	NA
WP_002985746.1\|1512215_1512623_-	diacylglycerol kinase	NA	NA	NA	NA
WP_002985748.1\|1512603_1513101_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_002985750.1\|1513259_1513835_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_002985751.1\|1513880_1514933_-	PhoH family protein	W8D063	Erwinia_phage	1.2e-46	50.0
WP_032464218.1\|1515091_1516864_-	oleate hydratase	NA	NA	NA	NA
WP_002985755.1\|1517178_1518360_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	2.1e-15	39.6
WP_002985757.1\|1518515_1518731_-	YozE family protein	NA	NA	NA	NA
WP_002985759.1\|1518727_1519237_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002985761.1\|1519309_1520167_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_002985763.1\|1520275_1520833_-	ribosome recycling factor	NA	NA	NA	NA
WP_002985765.1\|1520861_1521590_-	UMP kinase	NA	NA	NA	NA
WP_002985768.1\|1521911_1522601_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_002990800.1\|1522706_1523132_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_111680889.1\|1523345_1524479_-\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_010921962.1\|1524701_1525055_+	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_002985774.1\|1525124_1527530_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.2e-88	51.4
WP_002985776.1\|1527746_1528553_+	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
WP_002985777.1\|1528699_1529554_-	metal ABC transporter permease	NA	NA	NA	NA
WP_002985780.1\|1529554_1530280_-	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.4e-17	32.6
WP_014407368.1\|1530343_1531276_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002985785.1\|1531421_1532069_+	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_002985787.1\|1532167_1532509_-	hypothetical protein	NA	NA	NA	NA
WP_002985789.1\|1532659_1533355_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_002985791.1\|1533374_1533626_-	hypothetical protein	NA	NA	NA	NA
WP_002985793.1\|1533625_1534180_-	NUDIX hydrolase	NA	NA	NA	NA
WP_020833305.1\|1534213_1535596_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	6.5e-32	36.0
WP_002985796.1\|1535769_1537107_-	MFS transporter	NA	NA	NA	NA
WP_111680890.1\|1537439_1538399_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002985800.1\|1538474_1539173_-	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	5.4e-11	26.0
WP_002990844.1\|1539165_1539402_-	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_032467294.1\|1540379_1540631_-	hypothetical protein	NA	NA	NA	NA
WP_011017434.1\|1541045_1541396_-	hypothetical protein	NA	NA	NA	NA
WP_002985808.1\|1541853_1542606_+	ADP-ribosyltransferase	NA	NA	NA	NA
WP_002985810.1\|1542808_1544989_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	7.3e-171	43.2
WP_002985812.1\|1544955_1545444_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.3e-11	37.5
WP_002985814.1\|1545447_1546461_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	1.6e-96	53.0
WP_111680891.1\|1546954_1548955_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.7e-87	35.3
WP_111680889.1\|1549235_1550369_-\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_002985820.1\|1550520_1551228_-	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_111680892.1\|1552000_1556944_-\|protease	CXC chemokine-degrading serine protease SpyCEP	NA	NA	NA	NA
WP_002985826.1\|1557209_1558391_-	L-lactate oxidase	NA	NA	NA	NA
WP_002985828.1\|1558624_1559452_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	8.4e-128	79.5
WP_002985829.1\|1559525_1559882_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.8e-40	66.7
WP_002985831.1\|1560179_1560809_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_002985833.1\|1560855_1561248_-	hypothetical protein	NA	NA	NA	NA
WP_002985836.1\|1561274_1562138_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	75.0
WP_002985838.1\|1562142_1562466_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
WP_032467296.1\|1562869_1563109_-	Tpl protein	NA	NA	NA	NA
WP_002985844.1\|1563127_1564003_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
WP_032464192.1\|1564020_1564656_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-65	63.4

DBSCAN-SWA_8

1830940 : 1846660

Streptococcus_phage(61.54%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014411911.1\|1830940_1831732_-	helix-turn-helix transcriptional regulator	A0A1S5SE31	Streptococcus_phage	7.5e-09	48.5
WP_003045754.1\|1831799_1832057_+	hypothetical protein	NA	NA	NA	NA
WP_011185070.1\|1832111_1832519_+	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	8.5e-49	68.7
WP_023080068.1\|1832532_1833150_+	Rha family transcriptional regulator	A0A159B6D5	Gordonia_phage	2.2e-11	38.8
WP_023611295.1\|1833383_1833725_+	hypothetical protein	NA	NA	NA	NA
WP_023611263.1\|1833711_1833933_+	hypothetical protein	NA	NA	NA	NA
WP_010922764.1\|1833935_1834127_+	hypothetical protein	NA	NA	NA	NA
WP_003058810.1\|1834138_1834468_+	hypothetical protein	NA	NA	NA	NA
WP_001100459.1\|1834470_1834743_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
WP_010922767.1\|1834743_1835601_+	replication protein	A0A1X9I6L2	Streptococcus_phage	4.5e-124	74.8
WP_032461241.1\|1835569_1837258_+	DNA primase	A0A1X9I717	Streptococcus_phage	5.5e-259	82.1
WP_000694577.1\|1837544_1837718_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
WP_014407944.1\|1837723_1837897_+	hypothetical protein	NA	NA	NA	NA
WP_023611171.1\|1837898_1838408_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
WP_002992480.1\|1838481_1838970_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.4e-45	54.9
WP_032461242.1\|1839369_1839732_+	DUF1492 domain-containing protein	A0A2H4JFS1	uncultured_Caudovirales_phage	1.3e-05	29.9
WP_111677542.1\|1839706_1840090_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	3.7e-14	41.7
WP_111677543.1\|1840290_1840953_+	hypothetical protein	NA	NA	NA	NA
WP_002982175.1\|1841349_1843905_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.0e-43	23.4
WP_002982173.1\|1843891_1844098_-	hypothetical protein	NA	NA	NA	NA
WP_002982171.1\|1844240_1844678_-	arginine repressor	NA	NA	NA	NA
WP_002982167.1\|1844968_1846660_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	1.9e-73	32.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LS483298

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection