CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483319	Staphylococcus aureus strain NCTC13140 chromosome 1	12 crisprs	cas3,csa3,WYL,DinG,DEDDh	13	4	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483319_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_1

396724-396824

Orphan

Consensus_repeat	Method
TTATGAATTGAGTATTAAATTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_1

>merge|NZ_LS483319|1|396724-396824|CRISPRCasFinder
TTATGAATTGAGTATTAAATTTGAAAGTAAATTACAGTTCTATAGGTTTATAAAAATCAGTTTTTAAATCAAAGCTATATATGAATTGAGTATTAAATTTG

>NZ_LS483319|1|1|396724-396824|CRISPRCasFinder
TTATGAATTGAGTATTAAATTTG	AAAGTAAATTACAGTTCTATAGGTTTATAAAAATCAGTTTTTAAATCAAAGCTAT
ATATGAATTGAGTATTAAATTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000746687.1\|389968_390595_-\|NDxxF-motif-lipoprotein	unknown	unknown	gnl\|CDD\|380196
NZ_LS483319.1\|WP_000264071.1\|401523_402990_+\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
NZ_LS483319.1\|WP_000956132.1\|396840_397797_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_LS483319.1\|WP_000424966.1\|403014_404556_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_LS483319.1\|WP_000041883.1\|405597_406302_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_LS483319.1\|WP_000394698.1\|397914_398577_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000763768.1\|398719_399127_-\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_LS483319.1\|WP_000930486.1\|391039_392563_-\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
NZ_LS483319.1\|WP_000551776.1\|404668_405205_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000421410.1\|399639_400218_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_LS483319.1\|WP_000211676.1\|388296_388506_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001789518.1\|395948_396050_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001289311.1\|393639_394395_+\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_LS483319.1\|WP_000793009.1\|400217_401486_+\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_LS483319.1\|WP_000159787.1\|406700_406973_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_LS483319.1\|WP_000868248.1\|389330_389714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000991007.1\|394475_395864_-\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_LS483319.1\|WP_000466748.1\|388006_388258_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LS483319.1\|WP_000158374.1\|388683_389265_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LS483319.1\|WP_000052781.1\|392578_393148_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000746687.1\|389968_390595_-\|NDxxF-motif-lipoprotein	gnl\|CDD\|380196	NF033193, lipo_NDxxF, NDxxF motif lipoprotein. Members of this family are lipoproteins, about 200 amino acids long in precursor form, found in Staphylococcus aureus, Bacillus cereus, and various other Firmicutes. The protein family is named for one of its several highly conserved motifs.	1.67126e-71
NZ_LS483319.1\|WP_000264071.1\|401523_402990_+\|IMP-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
NZ_LS483319.1\|WP_000956132.1\|396840_397797_-\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.000748442
NZ_LS483319.1\|WP_000424966.1\|403014_404556_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_LS483319.1\|WP_000041883.1\|405597_406302_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	9.65175e-08
NZ_LS483319.1\|WP_000763768.1\|398719_399127_-\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	2.0219e-12
NZ_LS483319.1\|WP_000930486.1\|391039_392563_-\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
NZ_LS483319.1\|WP_000421410.1\|399639_400218_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	9.01486e-119
NZ_LS483319.1\|WP_001289311.1\|393639_394395_+\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.03864e-88
NZ_LS483319.1\|WP_000159787.1\|406700_406973_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.23077e-11
NZ_LS483319.1\|WP_000793009.1\|400217_401486_+\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	2.75897e-170
NZ_LS483319.1\|WP_000991007.1\|394475_395864_-\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_LS483319.1\|WP_000466748.1\|388006_388258_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.58864e-09
NZ_LS483319.1\|WP_000158374.1\|388683_389265_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.78414e-49
NZ_LS483319.1\|WP_000052781.1\|392578_393148_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	1.50623e-124

>NZ_LS483319.1|WP_001789518.1|395948_396050_+|hypothetical-protein
MQLNVNMMKFDRWHKGICKQIVLNSVVIGGKGK
>NZ_LS483319.1|WP_000991007.1|394475_395864_-|L-cystine-transporter
MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVFGVLLHLIYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKFAKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTAHTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKRAIDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYIIHLIILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFAATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDTFDSNDNAALTSH
>NZ_LS483319.1|WP_001289311.1|393639_394395_+|NADPH-dependent-oxidoreductase
MSEHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFLQAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYGSTEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFGMAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGNRKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR
>NZ_LS483319.1|WP_000052781.1|392578_393148_-|peroxiredoxin
MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI
>NZ_LS483319.1|WP_000930486.1|391039_392563_-|alkyl-hydroperoxide-reductase-subunit-F
MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKDLLTEITDMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKKLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREESENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEEHLLNLDGIFVQIGLLPNTSWLNDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN
>NZ_LS483319.1|WP_000746687.1|389968_390595_-|NDxxF-motif-lipoprotein
MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK
>NZ_LS483319.1|WP_000868248.1|389330_389714_-|hypothetical-protein
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP
>NZ_LS483319.1|WP_000158374.1|388683_389265_+|histidine-phosphatase-family-protein
MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTDTGTKSADDLCDYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISANPKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAHQVVIRCLMVYFNKVSRAEAVDLKVENCKPYIIE
>NZ_LS483319.1|WP_000211676.1|388296_388506_-|hypothetical-protein
MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPKFPHINLLLFNPILSTFSNIIIHIDHFHANKKDDN
>NZ_LS483319.1|WP_000466748.1|388006_388258_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MFGFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWVGGKLFGQWGPELGSIYILPALIGSIILIAIVTLILRAMRK
>NZ_LS483319.1|WP_000956132.1|396840_397797_-|hypothetical-protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVEDLRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQEAQASQAKALAESTNKVEKNAVTEDKADSKDSKVAGVNTSTDAKTDTKAENAGDGTATKVDKEDQISATEAIEKASVEQSKNDNAAETSNKEATVDAEAQHDAEQQVAEAHAEASKQATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL
>NZ_LS483319.1|WP_000394698.1|397914_398577_-|hypothetical-protein
MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNKTENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHELNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHPTNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRKPF
>NZ_LS483319.1|WP_000763768.1|398719_399127_-|general-stress-protein
MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEEIDITHFAEASKGPKA
>NZ_LS483319.1|WP_000421410.1|399639_400218_+|xanthine-phosphoribosyltransferase
MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE
>NZ_LS483319.1|WP_000793009.1|400217_401486_+|purine-permease
MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEENVK
>NZ_LS483319.1|WP_000264071.1|401523_402990_+|IMP-dehydrogenase
MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF
>NZ_LS483319.1|WP_000424966.1|403014_404556_+|glutamine-hydrolyzing-GMP-synthase
MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCRGQWTMENFIEIEIEKIRQRVGDRRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNIIRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
>NZ_LS483319.1|WP_000551776.1|404668_405205_-|hypothetical-protein
MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQIVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLINHINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
>NZ_LS483319.1|WP_000041883.1|405597_406302_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYKSYSRGTVVYVKLGSNIGSEFSGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALAQKYREIDIKLSTEDKKLLSNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN
>NZ_LS483319.1|WP_000159787.1|406700_406973_-|transposase
MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI

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Crispr_ID: NZ_LS483319_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_2

654936-655028

Orphan

Consensus_repeat	Method
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_2

>merge|NZ_LS483319|2|654936-655028|CRISPRCasFinder
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTAAGGCACAACTGCATAAAAGCCTCTAATCGCTAAAGATGAAGAGGAACGCAGTTGGATGCTA

>NZ_LS483319|2|2|654936-655028|CRISPRCasFinder
CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	AGGCACAACTGCATAAAAGCCTCTAATCG
CTAAAGATGAAGAGGAACGCAGTTGGATGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000633782.1\|646770_647307_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_LS483319.1\|WP_001018677.1\|661367_661742_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
NZ_LS483319.1\|WP_000477504.1\|647475_647952_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LS483319.1\|WP_001045421.1\|660328_661117_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LS483319.1\|WP_000655099.1\|651419_651527_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000808902.1\|645621_646560_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381309
NZ_LS483319.1\|WP_000180230.1\|647991_649287_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_LS483319.1\|WP_015581799.1\|655096_655984_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238563
NZ_LS483319.1\|WP_001790232.1\|656131_657082_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LS483319.1\|WP_000359086.1\|651619_652036_+\|DUF1934-domain-containing-protein	unknown	unknown	gnl\|CDD\|226896
NZ_LS483319.1\|WP_001553862.1\|662690_663620_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225778
NZ_LS483319.1\|WP_111759401.1\|663814_664039_-\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
NZ_LS483319.1\|WP_000901764.1\|654082_654718_+\|endonuclease-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|225140
NZ_LS483319.1\|WP_001222133.1\|659443_660160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001788287.1\|649314_649836_+\|YwhD-family-protein	unknown	unknown	gnl\|CDD\|378039
NZ_LS483319.1\|WP_000735558.1\|658775_659282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001200748.1\|650334_651345_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|181842
NZ_LS483319.1\|WP_001021145.1\|652032_653694_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234964
NZ_LS483319.1\|WP_000362967.1\|657839_658640_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LS483319.1\|WP_000365354.1\|657136_657856_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000633782.1\|646770_647307_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.16348e-26
NZ_LS483319.1\|WP_001018677.1\|661367_661742_-\|transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.77309e-26
NZ_LS483319.1\|WP_000477504.1\|647475_647952_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.13315e-11
NZ_LS483319.1\|WP_001045421.1\|660328_661117_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.55978e-34
NZ_LS483319.1\|WP_001200748.1\|650334_651345_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|181842	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional.	0
NZ_LS483319.1\|WP_000808902.1\|645621_646560_+\|aldo/keto-reductase	gnl\|CDD\|381309	cd19083, AKR_AKR11A1_11D1, AKR11A and AKR11D families of aldo-keto reductase (AKR). Bacillus subtilis aldo-keto reductase IolS, also called vegetative protein 147 (VEG147), is a founding member of aldo-keto reductase family 11 member A1 (AKR11A1). It is able to reduce the standard aldo-keto reductase (AKR) substrates DL-glyceraldehyde, D-erythrose, and methylglyoxal in the presence of NADPH, albeit with poor efficiency in vitro. Bacillus aryabhattai aldo keto reductase is a founding member of aldo-keto reductase family 11 member D1 (AKR11D1).	7.3194e-168
NZ_LS483319.1\|WP_000180230.1\|647991_649287_+\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.70707e-150
NZ_LS483319.1\|WP_015581799.1\|655096_655984_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238563	cd01143, YvrC, Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	6.03257e-73
NZ_LS483319.1\|WP_001790232.1\|656131_657082_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	5.19191e-48
NZ_LS483319.1\|WP_000359086.1\|651619_652036_+\|DUF1934-domain-containing-protein	gnl\|CDD\|226896	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown].	2.62525e-58
NZ_LS483319.1\|WP_001553862.1\|662690_663620_-\|DMT-family-transporter	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	7.93315e-37
NZ_LS483319.1\|WP_111759401.1\|663814_664039_-\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	1.82846e-13
NZ_LS483319.1\|WP_000901764.1\|654082_654718_+\|endonuclease-III-domain-containing-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	3.98158e-90
NZ_LS483319.1\|WP_001788287.1\|649314_649836_+\|YwhD-family-protein	gnl\|CDD\|378039	pfam08741, YwhD, YwhD family. This family of proteins are currently uncharacterized. They are around 170 amino acids in length.	8.7406e-98
NZ_LS483319.1\|WP_001021145.1\|652032_653694_+\|arginine--tRNA-ligase	gnl\|CDD\|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
NZ_LS483319.1\|WP_000362967.1\|657839_658640_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.17592e-26
NZ_LS483319.1\|WP_000365354.1\|657136_657856_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.6864e-38

>NZ_LS483319.1|WP_000901764.1|654082_654718_+|endonuclease-III-domain-containing-protein
MLGTDELYKVLYEHLGPQFWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>NZ_LS483319.1|WP_001021145.1|652032_653694_+|arginine--tRNA-ligase
MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
>NZ_LS483319.1|WP_000359086.1|651619_652036_+|DUF1934-domain-containing-protein
MDKKVSIQTKQVLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE
>NZ_LS483319.1|WP_000655099.1|651419_651527_+|hypothetical-protein
MKDSENLVFFGFEVLFVFYKMAYIYEALIKYGIVN
>NZ_LS483319.1|WP_001200748.1|650334_651345_+|alcohol-dehydrogenase-AdhP
MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
>NZ_LS483319.1|WP_001788287.1|649314_649836_+|YwhD-family-protein
MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
>NZ_LS483319.1|WP_000180230.1|647991_649287_+|HD-domain-containing-protein
MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLRRIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHHNKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFEETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISELQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIHSITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN
>NZ_LS483319.1|WP_000477504.1|647475_647952_+|GNAT-family-N-acetyltransferase
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF
>NZ_LS483319.1|WP_000633782.1|646770_647307_+|flavodoxin-family-protein
MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ
>NZ_LS483319.1|WP_000808902.1|645621_646560_+|aldo/keto-reductase
MKQFVNLGKSDVEVFPIALGTNAVGGHNLYPNLDEEQGKDVVRQAINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQPEYLKQQVENSLKRLQTDYIDLYYIHFPDNNTPKDQAVAALQELKEQGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDENTKFSDHRTTRRDFKPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVIIPGAKRAEQVVENIKAADIVLSDDEIQYIDELFPIED
>NZ_LS483319.1|WP_015581799.1|655096_655984_+|ABC-transporter-substrate-binding-protein
MKKSLIAFILIFMLVLSGCGMKDNDKQGSNDNGSSKSPYHRIVSLMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILAHESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEETKDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGWNPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTCIEVVNGDEVSRPGPRIDEGLKELRDAIYRK
>NZ_LS483319.1|WP_001790232.1|656131_657082_+|iron-ABC-transporter-permease
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>NZ_LS483319.1|WP_000365354.1|657136_657856_+|HAD-family-hydrolase
MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
>NZ_LS483319.1|WP_000362967.1|657839_658640_+|alpha/beta-hydrolase
MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRKMNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV
>NZ_LS483319.1|WP_000735558.1|658775_659282_+|hypothetical-protein
MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQSLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTHISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIKLYRIDLEK
>NZ_LS483319.1|WP_001222133.1|659443_660160_+|hypothetical-protein
MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL
>NZ_LS483319.1|WP_001045421.1|660328_661117_+|alpha/beta-hydrolase
MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS
>NZ_LS483319.1|WP_001018677.1|661367_661742_-|transcriptional-regulator
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
>NZ_LS483319.1|WP_001553862.1|662690_663620_-|DMT-family-transporter
MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGTICLIILNIIINPEVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIATVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIVGIVIMNQFNKNNLLLTDQKYLLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSLKLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILIDHFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF
>NZ_LS483319.1|WP_111759401.1|663814_664039_-|DUF2922-domain-containing-protein
MTKTLELSFKSSLDKSVKLQLPQLNNVVTEQVARDSMNALVDLNIIKSNSGTITKVHSAQIIDKTTTVLFEDKK

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Crispr_ID: NZ_LS483319_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_3

774401-774483

Orphan

Consensus_repeat	Method
CCAATTTCTACAGACAATGCAAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_3

>merge|NZ_LS483319|3|774401-774483|CRISPRCasFinder
CCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGG

>NZ_LS483319|3|3|774401-774483|CRISPRCasFinder
CCAATTTCTACAGACAATGCAAGTTGG	CGGGGCCCCAACATAGAGAAATTGGAACG
CCAATTTCTACAGACAATGCAAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_111759404.1\|770450_771488_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235106
NZ_LS483319.1\|WP_001790641.1\|775939_776041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000499195.1\|784165_784321_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000197271.1\|773709_774252_+\|5'-3'-deoxyribonucleotidase	unknown	unknown	gnl\|CDD\|226895
NZ_LS483319.1\|WP_000692521.1\|780152_780551_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|224694
NZ_LS483319.1\|WP_000284571.1\|771638_773243_+\|IS1182-like-element-IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_LS483319.1\|WP_000180991.1\|768696_770211_+\|ABC-transporter-permease/substrate-binding-protein	unknown	unknown	gnl\|CDD\|270328
NZ_LS483319.1\|WP_000193751.1\|776118_777624_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_LS483319.1\|WP_000022323.1\|760139_761144_+\|biotin-dependent-carboxyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224895
NZ_LS483319.1\|WP_000525109.1\|763828_765712_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_LS483319.1\|WP_000589260.1\|767726_768704_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_LS483319.1\|WP_001068497.1\|778484_779351_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_LS483319.1\|WP_000876318.1\|784359_785331_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226965
NZ_LS483319.1\|WP_000855505.1\|780513_782619_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236069
NZ_LS483319.1\|WP_000098285.1\|761617_763558_+\|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS	unknown	unknown	gnl\|CDD\|224287
NZ_LS483319.1\|WP_000429014.1\|774931_775849_-\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_LS483319.1\|WP_000983677.1\|765723_767505_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_LS483319.1\|WP_000708692.1\|759445_760156_+\|allophanate-hydrolase-subunit-1	unknown	unknown	gnl\|CDD\|224960
NZ_LS483319.1\|WP_000562498.1\|782736_783708_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_LS483319.1\|WP_000930014.1\|777964_778465_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|223851

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_111759404.1\|770450_771488_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235106	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional.	0
NZ_LS483319.1\|WP_000876318.1\|784359_785331_+\|ABC-transporter-permease	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.32603e-150
NZ_LS483319.1\|WP_000197271.1\|773709_774252_+\|5'-3'-deoxyribonucleotidase	gnl\|CDD\|226895	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism].	1.15481e-107
NZ_LS483319.1\|WP_000692521.1\|780152_780551_+\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|224694	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism].	5.52807e-56
NZ_LS483319.1\|WP_000284571.1\|771638_773243_+\|IS1182-like-element-IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	7.49065e-31
NZ_LS483319.1\|WP_000180991.1\|768696_770211_+\|ABC-transporter-permease/substrate-binding-protein	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.03165e-152
NZ_LS483319.1\|WP_000193751.1\|776118_777624_-\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.22605e-172
NZ_LS483319.1\|WP_000022323.1\|760139_761144_+\|biotin-dependent-carboxyltransferase-family-protein	gnl\|CDD\|224895	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism].	1.25641e-144
NZ_LS483319.1\|WP_000525109.1\|763828_765712_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_LS483319.1\|WP_000589260.1\|767726_768704_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	4.80291e-155
NZ_LS483319.1\|WP_001068497.1\|778484_779351_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	3.8323e-10
NZ_LS483319.1\|WP_000855505.1\|780513_782619_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_LS483319.1\|WP_000098285.1\|761617_763558_+\|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	0
NZ_LS483319.1\|WP_000429014.1\|774931_775849_-\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	3.10512e-78
NZ_LS483319.1\|WP_000983677.1\|765723_767505_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483319.1\|WP_000708692.1\|759445_760156_+\|allophanate-hydrolase-subunit-1	gnl\|CDD\|224960	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism].	1.29969e-94
NZ_LS483319.1\|WP_000562498.1\|782736_783708_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	2.30551e-164
NZ_LS483319.1\|WP_000930014.1\|777964_778465_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|223851	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only].	7.91282e-79

>NZ_LS483319.1|WP_000197271.1|773709_774252_+|5'-3'-deoxyribonucleotidase
MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPYAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRFERVNSWKDVEQYFLDNIEK
>NZ_LS483319.1|WP_000284571.1|771638_773243_+|IS1182-like-element-IS1182-family-transposase
MYQNYTINQLCLPIDLEIKLEENDFAHAIVQFVDSIPDEVFLPYYQSMGRPQYHPRMLLSIILCAYIQGVYSGRQIQNMLIDSIRMRYLSQEQFPNFRTINRFRVHPIMNDILDHSFVQFRELLVQSGLISGSALYIDGTKIEADANKYSFVWKKSILKYKDSLDQKALENYQQMVETKILPELIDDLKDELSIEEIERIRQSLEEKENQLIEAIDQTETVEERKLLRKEKSEVHKQKKRFDDFAQRKMSYEEQLVIMGVRNSFSKTDHDATFMRMKEDHMLNGQLKPGYNIQLATENQFALAYDCYPNPTDTRTFIPFLEKIESKIGLPENIVADAGYASEENYCYVLDETESTPIIPHQGYLKEKKRAHKQNQFHRDNWTYNELDDYYICPNQKRVVFSHYSQRKDRNGFIRNFKIYECEDCTGCPLREKCTKAKEGKNRRLNINPTWEYIKIKANEKIESKETASYYAQRKIDVETVFGNIKQNMKFKRFHVRGAEKIFKEMGLVFLAHNFRKLVTRVRKYEGKTIIQNQI
>NZ_LS483319.1|WP_111759404.1|770450_771488_+|histidinol-phosphate-transaminase
MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSPKVKEAISAHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLTPGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDTSLVWLCNPNNPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRTFSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHKNSVERERFYQLPQSEYFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIGFKEQNDKMLGG
>NZ_LS483319.1|WP_000180991.1|768696_770211_+|ABC-transporter-permease/substrate-binding-protein
MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRFMAKLSYKKLLMTLGVIVMIIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAFLFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMKYNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNLDNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKESFLKKHPEIKKPLNKLENKISDEDMQMMNYKVTVKNEDPYTVAKDYLKAKGLIK
>NZ_LS483319.1|WP_000589260.1|767726_768704_+|ABC-transporter-ATP-binding-protein
MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTLKMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMDEPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQIDTPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTSMSAYPIVYDNQPIEVLYQLLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD
>NZ_LS483319.1|WP_000983677.1|765723_767505_+|DNA-helicase-RecQ
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVEELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
>NZ_LS483319.1|WP_000525109.1|763828_765712_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREENEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
>NZ_LS483319.1|WP_000098285.1|761617_763558_+|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS
MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMAASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALASEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGDFITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPKANSKK
>NZ_LS483319.1|WP_000022323.1|760139_761144_+|biotin-dependent-carboxyltransferase-family-protein
MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRLVANDKNEATLEMTNKMATIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLKFRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTARHHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVVKNKGTEDFKEDAIQRFVKHDYKVTSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
>NZ_LS483319.1|WP_000708692.1|759445_760156_+|allophanate-hydrolase-subunit-1
MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIEIVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYGSKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSKQKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFRPINENELEVGAFKDVNHN
>NZ_LS483319.1|WP_000429014.1|774931_775849_-|diacylglycerol-kinase-family-lipid-kinase
MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLSENEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMTHDLQLPIGILPGGTFNDFTKTLNIAPNHKQASEQMISAQVGTYDVIKINNQYALNFVGLGLIVQNAENVQDGSKDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILTANGPFIGGSRIPLTDLSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKVDIDGEISLETPIDIEVIPNAIQLLTVNDL
>NZ_LS483319.1|WP_001790641.1|775939_776041_+|hypothetical-protein
MVINEIDFYRVGRENIVIAVYNEHIKFLFILIS
>NZ_LS483319.1|WP_000193751.1|776118_777624_-|peptide-MFS-transporter
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFVIFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR
>NZ_LS483319.1|WP_000930014.1|777964_778465_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYPEKIDNR
>NZ_LS483319.1|WP_001068497.1|778484_779351_-|DMT-family-transporter
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK
>NZ_LS483319.1|WP_000692521.1|780152_780551_+|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
>NZ_LS483319.1|WP_000855505.1|780513_782619_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCSI
>NZ_LS483319.1|WP_000562498.1|782736_783708_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFLETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEEREFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK
>NZ_LS483319.1|WP_000499195.1|784165_784321_+|hypothetical-protein
MFYFTLSKQNTHSEKLNFSLIANINKIDTKLFERLLKLWSKNATINEKYYQ
>NZ_LS483319.1|WP_000876318.1|784359_785331_+|ABC-transporter-permease
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVSPTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLRTNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVVTVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNYAQQ

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Crispr_ID: NZ_LS483319_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_4

815398-815478

Unclear

Consensus_repeat	Method
TTCTTTATGTTGGGGCCCCGCCAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_4

>merge|NZ_LS483319|4|815398-815478|CRISPRCasFinder
TTCTTTATGTTGGGGCCCCGCCAACTTGCATTGTTTGTAGAATTTCTTTTCGAAATTCTTTATGTTGGGGCCCCGCCAACT

>NZ_LS483319|4|4|815398-815478|CRISPRCasFinder
TTCTTTATGTTGGGGCCCCGCCAACT	TGCATTGTTTGTAGAATTTCTTTTCGAAA
TTCTTTATGTTGGGGCCCCGCCAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000749380.1\|808103_808943_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_LS483319.1\|WP_000229253.1\|810268_812254_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_LS483319.1\|WP_001790093.1\|807848_807956_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000057551.1\|817992_819432_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276808
NZ_LS483319.1\|WP_000638419.1\|809763_810000_+\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_LS483319.1\|WP_000958224.1\|815714_816647_+\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_LS483319.1\|WP_000369722.1\|821313_822225_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|224574
NZ_LS483319.1\|WP_010956549.1\|806584_807695_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_LS483319.1\|WP_000617735.1\|802752_803325_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461
NZ_LS483319.1\|WP_001224793.1\|817499_817985_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_LS483319.1\|WP_000538141.1\|809116_809767_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_LS483319.1\|WP_000513308.1\|816652_817492_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_LS483319.1\|WP_000134963.1\|819498_820434_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_LS483319.1\|WP_000662681.1\|812261_815108_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_LS483319.1\|WP_001790092.1\|806311_806416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001248939.1\|822221_823217_+\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_LS483319.1\|WP_000506531.1\|803738_806270_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_LS483319.1\|WP_001049165.1\|824843_825431_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_LS483319.1\|WP_000816295.1\|825673_826576_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_LS483319.1\|WP_000006551.1\|823326_824271_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000749380.1\|808103_808943_+\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	2.23913e-42
NZ_LS483319.1\|WP_000229253.1\|810268_812254_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_LS483319.1\|WP_001248939.1\|822221_823217_+\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	5.06652e-172
NZ_LS483319.1\|WP_000057551.1\|817992_819432_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	4.28078e-06
NZ_LS483319.1\|WP_000638419.1\|809763_810000_+\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	4.73465e-34
NZ_LS483319.1\|WP_000513308.1\|816652_817492_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	1.39921e-119
NZ_LS483319.1\|WP_000006551.1\|823326_824271_+\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	7.40812e-153
NZ_LS483319.1\|WP_000662681.1\|812261_815108_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_LS483319.1\|WP_010956549.1\|806584_807695_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_LS483319.1\|WP_000617735.1\|802752_803325_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	1.13584e-37
NZ_LS483319.1\|WP_001224793.1\|817499_817985_+\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	4.85181e-30
NZ_LS483319.1\|WP_000134963.1\|819498_820434_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	4.19425e-154
NZ_LS483319.1\|WP_000958224.1\|815714_816647_+\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_LS483319.1\|WP_000538141.1\|809116_809767_+\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_LS483319.1\|WP_000506531.1\|803738_806270_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_LS483319.1\|WP_001049165.1\|824843_825431_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.59321e-148
NZ_LS483319.1\|WP_000816295.1\|825673_826576_-\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	4.94096e-153
NZ_LS483319.1\|WP_000369722.1\|821313_822225_+\|RNase-adapter-RapZ	gnl\|CDD\|224574	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only].	4.97899e-170

>NZ_LS483319.1|WP_000662681.1|812261_815108_+|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_LS483319.1|WP_000229253.1|810268_812254_+|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_LS483319.1|WP_000638419.1|809763_810000_+|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_LS483319.1|WP_000538141.1|809116_809767_+|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_LS483319.1|WP_000749380.1|808103_808943_+|CHAP-domain-containing-protein
MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKAVKSPVRKASQAKKVVKQPVQQASKKVVVKQAPKQAVTKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH
>NZ_LS483319.1|WP_001790093.1|807848_807956_+|hypothetical-protein
MCLLKQHMQCAFSNITYGDFQGIELIIENVLNYMV
>NZ_LS483319.1|WP_010956549.1|806584_807695_+|peptide-chain-release-factor-2
MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD
>NZ_LS483319.1|WP_001790092.1|806311_806416_+|hypothetical-protein
MLWEESFYFTSVKYFKKCEEVVKRCYVLSFKKSV
>NZ_LS483319.1|WP_000506531.1|803738_806270_+|preprotein-translocase-subunit-SecA
MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKTKQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKGKDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFGEAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK
>NZ_LS483319.1|WP_000617735.1|802752_803325_+|ribosome-associated-translation-inhibitor-RaiA
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLIQTSEQ
>NZ_LS483319.1|WP_000958224.1|815714_816647_+|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_LS483319.1|WP_000513308.1|816652_817492_+|prolipoprotein-diacylglyceryl-transferase
MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
>NZ_LS483319.1|WP_001224793.1|817499_817985_+|acetyltransferase
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_LS483319.1|WP_000057551.1|817992_819432_+|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMAKQKFKQREYKRAAEYFEKVLELSPDDMEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYHNELFVSENDVMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_LS483319.1|WP_000134963.1|819498_820434_+|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA
>NZ_LS483319.1|WP_000369722.1|821313_822225_+|RNase-adapter-RapZ
MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
>NZ_LS483319.1|WP_001248939.1|822221_823217_+|YvcK-family-protein
MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK
>NZ_LS483319.1|WP_000006551.1|823326_824271_+|DNA-binding-protein-WhiA
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>NZ_LS483319.1|WP_001049165.1|824843_825431_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
>NZ_LS483319.1|WP_000816295.1|825673_826576_-|TIGR01777-family-protein
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE

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Crispr_ID: NZ_LS483319_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_5

820796-820881

Unclear

Consensus_repeat	Method
CCAACTTGCACATTATTGTAAGCTGACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_5

>merge|NZ_LS483319|5|820796-820881|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTT

>NZ_LS483319|5|5|820796-820881|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTT	CCGCCAGCTTCTGTGTTGGGGCCCCG
CCAACTTGCACATTATTGTAAGCTGACTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000749380.1\|808103_808943_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_LS483319.1\|WP_000057551.1\|817992_819432_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276808
NZ_LS483319.1\|WP_001248939.1\|822221_823217_+\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_LS483319.1\|WP_000006551.1\|823326_824271_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194
NZ_LS483319.1\|WP_000654030.1\|828667_829681_+\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_LS483319.1\|WP_000638419.1\|809763_810000_+\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_LS483319.1\|WP_000369722.1\|821313_822225_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|224574
NZ_LS483319.1\|WP_000662681.1\|812261_815108_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_LS483319.1\|WP_000229253.1\|810268_812254_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_LS483319.1\|WP_000279414.1\|829733_830744_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|273675
NZ_LS483319.1\|WP_001224793.1\|817499_817985_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_LS483319.1\|WP_000513308.1\|816652_817492_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_LS483319.1\|WP_000134963.1\|819498_820434_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_LS483319.1\|WP_000958224.1\|815714_816647_+\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_LS483319.1\|WP_000538141.1\|809116_809767_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_LS483319.1\|WP_111759405.1\|830882_832073_+\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_LS483319.1\|WP_001049165.1\|824843_825431_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_LS483319.1\|WP_000070826.1\|827278_827908_+\|DUF4887-domain-containing-protein	unknown	unknown	gnl\|CDD\|234750
NZ_LS483319.1\|WP_001260089.1\|832194_832956_+\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_LS483319.1\|WP_000816295.1\|825673_826576_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000749380.1\|808103_808943_+\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	2.23913e-42
NZ_LS483319.1\|WP_000057551.1\|817992_819432_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	4.28078e-06
NZ_LS483319.1\|WP_001248939.1\|822221_823217_+\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	5.06652e-172
NZ_LS483319.1\|WP_000006551.1\|823326_824271_+\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	7.40812e-153
NZ_LS483319.1\|WP_000654030.1\|828667_829681_+\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	1.39665e-92
NZ_LS483319.1\|WP_000638419.1\|809763_810000_+\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	4.73465e-34
NZ_LS483319.1\|WP_000369722.1\|821313_822225_+\|RNase-adapter-RapZ	gnl\|CDD\|224574	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only].	4.97899e-170
NZ_LS483319.1\|WP_000662681.1\|812261_815108_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_LS483319.1\|WP_000229253.1\|810268_812254_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_LS483319.1\|WP_000279414.1\|829733_830744_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_LS483319.1\|WP_001224793.1\|817499_817985_+\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	4.85181e-30
NZ_LS483319.1\|WP_000513308.1\|816652_817492_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	1.39921e-119
NZ_LS483319.1\|WP_000134963.1\|819498_820434_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	4.19425e-154
NZ_LS483319.1\|WP_000958224.1\|815714_816647_+\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_LS483319.1\|WP_000538141.1\|809116_809767_+\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_LS483319.1\|WP_111759405.1\|830882_832073_+\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_LS483319.1\|WP_001049165.1\|824843_825431_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.59321e-148
NZ_LS483319.1\|WP_000070826.1\|827278_827908_+\|DUF4887-domain-containing-protein	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	5.85535e-05
NZ_LS483319.1\|WP_001260089.1\|832194_832956_+\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.84083e-146
NZ_LS483319.1\|WP_000816295.1\|825673_826576_-\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	4.94096e-153

>NZ_LS483319.1|WP_000134963.1|819498_820434_+|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA
>NZ_LS483319.1|WP_000057551.1|817992_819432_+|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMAKQKFKQREYKRAAEYFEKVLELSPDDMEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYHNELFVSENDVMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_LS483319.1|WP_001224793.1|817499_817985_+|acetyltransferase
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_LS483319.1|WP_000513308.1|816652_817492_+|prolipoprotein-diacylglyceryl-transferase
MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
>NZ_LS483319.1|WP_000958224.1|815714_816647_+|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_LS483319.1|WP_000662681.1|812261_815108_+|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_LS483319.1|WP_000229253.1|810268_812254_+|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_LS483319.1|WP_000638419.1|809763_810000_+|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_LS483319.1|WP_000538141.1|809116_809767_+|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_LS483319.1|WP_000749380.1|808103_808943_+|CHAP-domain-containing-protein
MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKAVKSPVRKASQAKKVVKQPVQQASKKVVVKQAPKQAVTKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH
>NZ_LS483319.1|WP_000369722.1|821313_822225_+|RNase-adapter-RapZ
MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
>NZ_LS483319.1|WP_001248939.1|822221_823217_+|YvcK-family-protein
MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK
>NZ_LS483319.1|WP_000006551.1|823326_824271_+|DNA-binding-protein-WhiA
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>NZ_LS483319.1|WP_001049165.1|824843_825431_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
>NZ_LS483319.1|WP_000816295.1|825673_826576_-|TIGR01777-family-protein
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
>NZ_LS483319.1|WP_000070826.1|827278_827908_+|DUF4887-domain-containing-protein
MSNQNYDYNKNEDGSKKKMSTTAKVVSIATVLLLLGGLVFAIFAYVDHSNKAKERMLNEQKQEQKEKRQKENAEKERKKKQQEEKEQNELDSQANQYQQLPQQNQYQYVPPQQQAPTKQRPAKEENDDKASKDESKDKDDKASQDKSDDNQKKTDDNKQPAQPKPQPQQPTPKPNNNQQNNQSNQQAKPQAPQQNSQSTTNKQNNANDK
>NZ_LS483319.1|WP_000654030.1|828667_829681_+|sugar-binding-transcriptional-regulator
MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLLPYNVFFVPARGGLGENVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLLEPSVINTLDKIKQANVILHGIGDALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQGQIVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKIILE
>NZ_LS483319.1|WP_000279414.1|829733_830744_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
>NZ_LS483319.1|WP_111759405.1|830882_832073_+|phosphoglycerate-kinase
MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQDGKIVLFSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
>NZ_LS483319.1|WP_001260089.1|832194_832956_+|triose-phosphate-isomerase
MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK

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Crispr_ID: NZ_LS483319_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_6

864051-864132

Orphan

Consensus_repeat	Method
CCCCAACTTGCATTGTCTGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_6

>merge|NZ_LS483319|6|864051-864132|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAA

>NZ_LS483319|6|6|864051-864132|CRISPRCasFinder
CCCCAACTTGCATTGTCTGTAGAA	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT
CCCCAACTTGCATTGCCTGTAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_001183858.1\|868946_869798_-\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_LS483319.1\|WP_000168845.1\|870125_870887_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_LS483319.1\|WP_000290485.1\|862509_862890_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_LS483319.1\|WP_001006454.1\|872397_873648_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_LS483319.1\|WP_000932216.1\|863068_863947_+\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|226395
NZ_LS483319.1\|WP_000255561.1\|857808_858426_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198
NZ_LS483319.1\|WP_000520233.1\|866631_867327_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_LS483319.1\|WP_000150017.1\|860043_860760_+\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_LS483319.1\|WP_000571218.1\|865613_866639_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_LS483319.1\|WP_000732326.1\|867344_868166_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_LS483319.1\|WP_000752917.1\|868519_868714_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_LS483319.1\|WP_000974460.1\|859473_859896_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_LS483319.1\|WP_000205572.1\|870984_872292_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_LS483319.1\|WP_001065801.1\|865067_865364_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LS483319.1\|WP_001140686.1\|857154_857736_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LS483319.1\|WP_000422909.1\|860842_861382_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_LS483319.1\|WP_000589549.1\|861995_862352_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_LS483319.1\|WP_001190695.1\|861531_861852_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LS483319.1\|WP_000569884.1\|858580_859075_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_LS483319.1\|WP_001018962.1\|864688_865075_+\|topiosmerase	unknown	unknown	gnl\|CDD\|224572

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_001183858.1\|868946_869798_-\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	4.58436e-76
NZ_LS483319.1\|WP_000168845.1\|870125_870887_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.29081e-150
NZ_LS483319.1\|WP_000290485.1\|862509_862890_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.81086e-68
NZ_LS483319.1\|WP_001006454.1\|872397_873648_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_LS483319.1\|WP_000932216.1\|863068_863947_+\|DUF1963-domain-containing-protein	gnl\|CDD\|226395	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown].	1.16579e-75
NZ_LS483319.1\|WP_000255561.1\|857808_858426_-\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	9.12336e-62
NZ_LS483319.1\|WP_000520233.1\|866631_867327_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.67625e-100
NZ_LS483319.1\|WP_000150017.1\|860043_860760_+\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.26721e-148
NZ_LS483319.1\|WP_000571218.1\|865613_866639_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	3.37873e-170
NZ_LS483319.1\|WP_000732326.1\|867344_868166_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	2.15951e-112
NZ_LS483319.1\|WP_000752917.1\|868519_868714_+\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	5.95583e-07
NZ_LS483319.1\|WP_000974460.1\|859473_859896_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.58225e-61
NZ_LS483319.1\|WP_000205572.1\|870984_872292_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	8.11734e-136
NZ_LS483319.1\|WP_001065801.1\|865067_865364_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	7.01368e-14
NZ_LS483319.1\|WP_001140686.1\|857154_857736_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	1.48911e-47
NZ_LS483319.1\|WP_000422909.1\|860842_861382_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	1.47647e-49
NZ_LS483319.1\|WP_000589549.1\|861995_862352_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.06191e-56
NZ_LS483319.1\|WP_001190695.1\|861531_861852_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.70086e-24
NZ_LS483319.1\|WP_000569884.1\|858580_859075_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	2.53639e-47
NZ_LS483319.1\|WP_001018962.1\|864688_865075_+\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	2.45102e-36

>NZ_LS483319.1|WP_000932216.1|863068_863947_+|DUF1963-domain-containing-protein
MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMQEETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLDDLPEQQELFPVKEGILQFWISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLENIQAHLKSLDADNEDIPFSGAFSIEFRLSKQTITCTDYKYDEDVLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEPFNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTDLEAMKFDDYMYSWDCS
>NZ_LS483319.1|WP_000290485.1|862509_862890_+|glycine-cleavage-system-protein-GcvH
MAVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE
>NZ_LS483319.1|WP_000589549.1|861995_862352_+|arsenate-reductase-family-protein
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
>NZ_LS483319.1|WP_001190695.1|861531_861852_-|thioredoxin-family-protein
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
>NZ_LS483319.1|WP_000422909.1|860842_861382_+|nitroreductase
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEGDMPKAPRKNRNLITLY
>NZ_LS483319.1|WP_000150017.1|860043_860760_+|type-I-3-dehydroquinate-dehydratase
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
>NZ_LS483319.1|WP_000974460.1|859473_859896_-|organic-hydroperoxide-resistance-protein
MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
>NZ_LS483319.1|WP_000569884.1|858580_859075_-|GNAT-family-N-acetyltransferase
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
>NZ_LS483319.1|WP_000255561.1|857808_858426_-|amino-acid-transporter
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF
>NZ_LS483319.1|WP_001140686.1|857154_857736_+|histidine-phosphatase-family-protein
MAKTLYIMRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYYETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGIFEGESVYLFDNLYKPEDLFGDRIVPFKGEARQQVEERIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKLDEALKHNIGNCNILKFEYDNGTFKFVELIDPNL
>NZ_LS483319.1|WP_001018962.1|864688_865075_+|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
>NZ_LS483319.1|WP_001065801.1|865067_865364_+|thioredoxin-family-protein
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
>NZ_LS483319.1|WP_000571218.1|865613_866639_+|methionine-ABC-transporter-ATP-binding-protein
MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGKVIEQGPVTQVFENPQHTVTKRFVKDDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVLRHG
>NZ_LS483319.1|WP_000520233.1|866631_867327_+|ABC-transporter-permease
MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
>NZ_LS483319.1|WP_000732326.1|867344_868166_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
>NZ_LS483319.1|WP_000752917.1|868519_868714_+|CsbD-family-protein
MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
>NZ_LS483319.1|WP_001183858.1|868946_869798_-|DUF368-domain-containing-protein
MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
>NZ_LS483319.1|WP_000168845.1|870125_870887_+|Fe-S-cluster-assembly-ATPase-SufC
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE
>NZ_LS483319.1|WP_000205572.1|870984_872292_+|Fe-S-cluster-assembly-protein-SufD
MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK
>NZ_LS483319.1|WP_001006454.1|872397_873648_+|cysteine-desulfurase
MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF

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Crispr_ID: NZ_LS483319_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_7

912894-913232

Orphan

Consensus_repeat	Method
AAAGNCAGCTNNNNANANNNTGCAAGTTGG	CRT

5 spacers

The CRISPR arrays of NZ_LS483319_7

>merge|NZ_LS483319|7|912894-913232|CRT
AAAGTCAGCTTACAATAGTGTGCAAGTTGGCGGGGCCCCAACACAGAGGCTGGTGGAAAGTCAGCTTACAATAGTGTGCAAGTTGGCGGGGCCCCAACACAGAGGCTGGCGGAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGAGCCCCGACACAGAGAAATTAGCTCCTCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGAAAAGTCAGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGG

>NZ_LS483319|7|1|912894-913232|CRT
AAAGTCAGCTTACAATAGTGTGCAAGTTGG	CGGGGCCCCAACACAGAGGCTGGTGG
AAAGTCAGCTTACAATAGTGTGCAAGTTGG	CGGGGCCCCAACACAGAGGCTGGCGG
AAAGTCAGCTTACAATAGTGTGCAAGTTGG	GGTGGAGCCCCGACACAGAGAAATTAGC
TCCTCAATTTCTACAGACAATGCAAGTTGG	CGGGGCCCCAACACAGAAGCTGGCGA
AAAGTCAGCTTACAATAGTGTGCAAGTTGG	GGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAA
AAAGACAGCAGTAGGATAATTTCAATTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000007967.1\|919053_919629_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_LS483319.1\|WP_000066053.1\|914472_915852_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_LS483319.1\|WP_000758215.1\|919633_920158_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_LS483319.1\|WP_000054609.1\|904033_906439_-\|Na+/H+-antiporter-subunit-A	unknown	unknown	gnl\|CDD\|237155
NZ_LS483319.1\|WP_111759407.1\|915841_917047_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_LS483319.1\|WP_000154930.1\|924385_928039_+\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_LS483319.1\|WP_000838037.1\|908764_909892_+\|NADH-dependent-flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240086
NZ_LS483319.1\|WP_001067294.1\|908025_908403_+\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224023
NZ_LS483319.1\|WP_001081626.1\|903612_904041_-\|Na(+)/H(+)-antiporter-subunit-B	unknown	unknown	gnl\|CDD\|183602
NZ_LS483319.1\|WP_000711486.1\|920173_920749_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_LS483319.1\|WP_000035058.1\|907016_907610_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238908
NZ_LS483319.1\|WP_000781156.1\|906569_906953_-\|kinase-associated-lipoprotein-B	unknown	unknown	gnl\|CDD\|378054
NZ_LS483319.1\|WP_000185319.1\|913301_914231_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176543
NZ_LS483319.1\|WP_000167314.1\|910199_911390_+\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736
NZ_LS483319.1\|WP_000148855.1\|917397_918729_+\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_LS483319.1\|WP_000138487.1\|911498_912743_+\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_LS483319.1\|WP_000670752.1\|928204_929107_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_LS483319.1\|WP_000402803.1\|903271_903613_-\|Na(+)/H(+)-antiporter-subunit-C	unknown	unknown	gnl\|CDD\|181497
NZ_LS483319.1\|WP_000172342.1\|920908_924385_+\|helicase-exonuclease-AddAB-subunit-AddB	unknown	unknown	gnl\|CDD\|213736
NZ_LS483319.1\|WP_000573077.1\|901782_903279_-\|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl\|CDD\|181085

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000007967.1\|919053_919629_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.01759e-40
NZ_LS483319.1\|WP_000066053.1\|914472_915852_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_LS483319.1\|WP_000758215.1\|919633_920158_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.63848e-48
NZ_LS483319.1\|WP_000054609.1\|904033_906439_-\|Na+/H+-antiporter-subunit-A	gnl\|CDD\|237155	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed.	0
NZ_LS483319.1\|WP_111759407.1\|915841_917047_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_LS483319.1\|WP_000154930.1\|924385_928039_+\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483319.1\|WP_000838037.1\|908764_909892_+\|NADH-dependent-flavin-oxidoreductase	gnl\|CDD\|240086	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_LS483319.1\|WP_001067294.1\|908025_908403_+\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|224023	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis].	3.22125e-44
NZ_LS483319.1\|WP_001081626.1\|903612_904041_-\|Na(+)/H(+)-antiporter-subunit-B	gnl\|CDD\|183602	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B.	9.17513e-61
NZ_LS483319.1\|WP_000711486.1\|920173_920749_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	4.05406e-53
NZ_LS483319.1\|WP_000035058.1\|907016_907610_+\|peptidylprolyl-isomerase	gnl\|CDD\|238908	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.	3.93388e-65
NZ_LS483319.1\|WP_000781156.1\|906569_906953_-\|kinase-associated-lipoprotein-B	gnl\|CDD\|378054	pfam08810, KapB, Kinase associated protein B. This bacterial protein forms an anti-parallel beta sheet with an extending alpha helical region.	1.89892e-52
NZ_LS483319.1\|WP_000185319.1\|913301_914231_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176543	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	5.11302e-151
NZ_LS483319.1\|WP_000167314.1\|910199_911390_+\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_LS483319.1\|WP_000148855.1\|917397_918729_+\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_LS483319.1\|WP_000138487.1\|911498_912743_+\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NZ_LS483319.1\|WP_000670752.1\|928204_929107_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.0042e-87
NZ_LS483319.1\|WP_000402803.1\|903271_903613_-\|Na(+)/H(+)-antiporter-subunit-C	gnl\|CDD\|181497	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed.	9.82501e-64
NZ_LS483319.1\|WP_000172342.1\|920908_924385_+\|helicase-exonuclease-AddAB-subunit-AddB	gnl\|CDD\|213736	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RexAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. Nevertheless, the partner is designated AddB in both systems. This model describes the AddB protein as found Bacillus subtilis and related species. Although the RexB protein of Streptococcus and Lactococcus is considered to be orthologous, functionally equivalent, and merely named differently, all members of this protein family have a P-loop nucleotide binding motif GxxGxGK[ST] at the N-terminus, unlike RexB proteins, and a CxxCxxxxxC motif at the C-terminus, both of which may be relevant to function. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483319.1\|WP_000573077.1\|901782_903279_-\|Na+/H+-antiporter-subunit-D	gnl\|CDD\|181085	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0

>NZ_LS483319.1|WP_000138487.1|911498_912743_+|Glu/Leu/Phe/Val-dehydrogenase
MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRGWA
>NZ_LS483319.1|WP_000167314.1|910199_911390_+|ornithine--oxo-acid-transaminase
MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEVRGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ
>NZ_LS483319.1|WP_000838037.1|908764_909892_+|NADH-dependent-flavin-oxidoreductase
MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSNIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWANQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK
>NZ_LS483319.1|WP_001067294.1|908025_908403_+|S1-RNA-binding-domain-containing-protein
MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKYGFQTLKERLPIWIKQSKRAIRND
>NZ_LS483319.1|WP_000035058.1|907016_907610_+|peptidylprolyl-isomerase
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
>NZ_LS483319.1|WP_000781156.1|906569_906953_-|kinase-associated-lipoprotein-B
MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNPTETEGVFFHDRKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKLKAQQTKHAEMSLASLARLKEDYSLQYKENFK
>NZ_LS483319.1|WP_000054609.1|904033_906439_-|Na+/H+-antiporter-subunit-A
MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWVWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTIFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVKNHE
>NZ_LS483319.1|WP_001081626.1|903612_904041_-|Na(+)/H(+)-antiporter-subunit-B
MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGLLFASSLVIITIAFDIETMRKIFPLDFKILIGIGLVFCIATPIASWFLGKNFFTHVTFDIPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE
>NZ_LS483319.1|WP_000402803.1|903271_903613_-|Na(+)/H(+)-antiporter-subunit-C
MEIIMIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLITMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDNVESMKGVPEDD
>NZ_LS483319.1|WP_000573077.1|901782_903279_-|Na+/H+-antiporter-subunit-D
MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK
>NZ_LS483319.1|WP_000185319.1|913301_914231_-|glycerophosphodiester-phosphodiesterase
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK
>NZ_LS483319.1|WP_000066053.1|914472_915852_-|argininosuccinate-lyase
MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
>NZ_LS483319.1|WP_111759407.1|915841_917047_-|argininosuccinate-synthase
MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDIVYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVEIAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKHNIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDTADEIILTFDKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAEVILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVSGDVRIKLFKGNAIVNGRKSPYTLYDEKLATYTKEDVFNQDAAVGFIDIYGLPTQVNAMLHGGYSNEQ
>NZ_LS483319.1|WP_000148855.1|917397_918729_+|glucose-6-phosphate-isomerase
MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKLEENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL
>NZ_LS483319.1|WP_000007967.1|919053_919629_+|TVP38/TMEM64-family-protein
MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINIQAYGPILGILISWLGLISGTFTVYLICKRLVNTERMQRIKQRTAVQRLISFIDRQGLIPLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTHPLRGILMLVVLVVFWIVGKKLEQHFMGSKKE
>NZ_LS483319.1|WP_000758215.1|919633_920158_+|signal-peptidase-I
MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
>NZ_LS483319.1|WP_000711486.1|920173_920749_+|signal-peptidase-I
MKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKHNFNPENTKN
>NZ_LS483319.1|WP_000172342.1|920908_924385_+|helicase-exonuclease-AddAB-subunit-AddB
MTLHAYLGRAGTGKSTKMLTEIKQKMKADPLGDPIILIAPTQSTFQLEQAFVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQEQQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQTRTKNKLEDIALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKGLIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFNQLYRFNNQDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYQDIAILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLRLLKTDVLTASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTEDERNTFEQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELPNQLMTERDELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVELSPTSDILQMDEAFVCYVAMTRAKGDVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLEITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLYDEIVADSWLDAYQVIRDSDHLNQGLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNERTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPKVQFNLLNSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLTTTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYMDIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWSDIDEDKLEQDLIKKFKLSGLVNADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFIETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQNININDEFGGEQ
>NZ_LS483319.1|WP_000154930.1|924385_928039_+|helicase-exonuclease-AddAB-subunit-AddA
MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVERIIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQAQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAFIELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQLVTPYEEEAQQAQLIQLLTDLSKVFITAAYDALNKAYDLFSMMDSVDKHLAVIEDERRLMGRVLEGGFIDIPYLTGHEFGARLPNVTAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQQLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYRQHFQEILVDEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYDEAAQLYYGAPYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRSATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPLQDIYLVGLMRSVIYQFKEDELAQIRILSPNDDYFYQSIVNYINDEAADAILVDKLKMFLSDIQSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLSKDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYRAVAEKELVSEEMRLVYVALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQSASIPDDLKFEKDIAQIEDSSRPNVNISIVYFEDVSTETILDNDEYRSVNQLETMQNGNEDVKAQIKHQLDYRYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFSTYERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADAKKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMIDLIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILNKEVKGYLYFFKFGTLQL
>NZ_LS483319.1|WP_000670752.1|928204_929107_+|fumarylacetoacetate-hydrolase-family-protein
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK

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Crispr_ID: NZ_LS483319_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_8

1046622-1046709

Orphan

Consensus_repeat	Method
CCCCTAACAACTAAAAGTTGTAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483319_8

>merge|NZ_LS483319|8|1046622-1046709|CRISPRCasFinder
CCCCTAACAACTAAAAGTTGTAAGGAAGGAGAGGGATACATGCGCCGAGCACATGCATAAAATCCCCTAACAACTAAAAGTTGTAAGG

>NZ_LS483319|8|7|1046622-1046709|CRISPRCasFinder
CCCCTAACAACTAAAAGTTGTAAGG	AAGGAGAGGGATACATGCGCCGAGCACATGCATAAAAT
CCCCTAACAACTAAAAGTTGTAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000273253.1\|1043345_1044152_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_LS483319.1\|WP_000921968.1\|1044144_1045545_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_LS483319.1\|WP_001289614.1\|1052870_1053104_-\|glutaredoxin-like-protein-NrdH	unknown	unknown	gnl\|CDD\|239274
NZ_LS483319.1\|WP_000033477.1\|1045559_1046135_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227065
NZ_LS483319.1\|WP_000009069.1\|1047004_1048300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000709290.1\|1040333_1041812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_LS483319.1\|WP_015581816.1\|1041833_1043081_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|237507
NZ_LS483319.1\|WP_015581815.1\|1034412_1035084_+\|phosphoribosylformylglycinamidine-synthase-I	unknown	unknown	gnl\|CDD\|235140
NZ_LS483319.1\|WP_000238664.1\|1039752_1040319_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|223376
NZ_LS483319.1\|WP_000064214.1\|1046718_1046853_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000638456.1\|1054659_1055679_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213
NZ_LS483319.1\|WP_000514290.1\|1055811_1056474_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_LS483319.1\|WP_000437472.1\|1050646_1050913_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NZ_LS483319.1\|WP_000483713.1\|1037244_1038729_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
NZ_LS483319.1\|WP_000040054.1\|1050915_1052634_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_LS483319.1\|WP_000685079.1\|1048724_1049897_+\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_LS483319.1\|WP_000381849.1\|1053301_1054663_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_LS483319.1\|WP_000032727.1\|1035076_1037266_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_LS483319.1\|WP_000030812.1\|1038721_1039750_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_LS483319.1\|WP_000505965.1\|1049950_1050493_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368297

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000273253.1\|1043345_1044152_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	7.39205e-29
NZ_LS483319.1\|WP_000921968.1\|1044144_1045545_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.67975e-64
NZ_LS483319.1\|WP_001289614.1\|1052870_1053104_-\|glutaredoxin-like-protein-NrdH	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	5.00495e-16
NZ_LS483319.1\|WP_000685079.1\|1048724_1049897_+\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	5.6543e-145
NZ_LS483319.1\|WP_000709290.1\|1040333_1041812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_LS483319.1\|WP_015581816.1\|1041833_1043081_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|237507	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_LS483319.1\|WP_015581815.1\|1034412_1035084_+\|phosphoribosylformylglycinamidine-synthase-I	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	8.23688e-141
NZ_LS483319.1\|WP_000033477.1\|1045559_1046135_-\|ECF-transporter-S-component	gnl\|CDD\|227065	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism].	4.34592e-70
NZ_LS483319.1\|WP_000638456.1\|1054659_1055679_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	6.42118e-76
NZ_LS483319.1\|WP_000514290.1\|1055811_1056474_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	4.35421e-66
NZ_LS483319.1\|WP_000437472.1\|1050646_1050913_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	2.44795e-51
NZ_LS483319.1\|WP_000483713.1\|1037244_1038729_+\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
NZ_LS483319.1\|WP_000040054.1\|1050915_1052634_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_LS483319.1\|WP_000381849.1\|1053301_1054663_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.48829e-165
NZ_LS483319.1\|WP_000032727.1\|1035076_1037266_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_LS483319.1\|WP_000238664.1\|1039752_1040319_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|223376	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism].	7.23817e-92
NZ_LS483319.1\|WP_000030812.1\|1038721_1039750_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_LS483319.1\|WP_000505965.1\|1049950_1050493_+\|hypothetical-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	0.00779365

>NZ_LS483319.1|WP_000033477.1|1045559_1046135_-|ECF-transporter-S-component
MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQLTNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELVFAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVAGVLSYLLVKALDKTGVTKLFRPAAKEDYDNL
>NZ_LS483319.1|WP_000921968.1|1044144_1045545_-|ABC-transporter-ATP-binding-protein
MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQLPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV
>NZ_LS483319.1|WP_000273253.1|1043345_1044152_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDIIFIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
>NZ_LS483319.1|WP_015581816.1|1041833_1043081_+|phosphoribosylamine--glycine-ligase
MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAKRQNVDWVVIGSEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
>NZ_LS483319.1|WP_000709290.1|1040333_1041812_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVPVRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLYPFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDSLDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIAGAKQLHGKQLSYNNIKDADATLALVKKFDTPATVAVKHMNPCGVGIGDTIEQAFQHAYEADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEIDMTIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVELAAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH
>NZ_LS483319.1|WP_000238664.1|1039752_1040319_+|phosphoribosylglycinamide-formyltransferase
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
>NZ_LS483319.1|WP_000030812.1|1038721_1039750_+|phosphoribosylformylglycinamidine-cyclo-ligase
MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGATFDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGAVEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVFLEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIFDWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDVSRALKILAEQNVEAYQIGHIVKNESTAIELLGV
>NZ_LS483319.1|WP_000483713.1|1037244_1038729_+|amidophosphoribosyltransferase
MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV
>NZ_LS483319.1|WP_000032727.1|1035076_1037266_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTETGIFSVMWSEHCSYKHSKPFLKQFPTSGDHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKDYNTSKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTNKAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDFEPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGLLSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSGKTLNIDNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD
>NZ_LS483319.1|WP_015581815.1|1034412_1035084_+|phosphoribosylformylglycinamidine-synthase-I
MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEELEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKDNNQIILKYVNNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSWREQHV
>NZ_LS483319.1|WP_000064214.1|1046718_1046853_-|hypothetical-protein
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
>NZ_LS483319.1|WP_000009069.1|1047004_1048300_+|hypothetical-protein
MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP
>NZ_LS483319.1|WP_000685079.1|1048724_1049897_+|class-I-SAM-dependent-rRNA-methyltransferase
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQQINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHVLNLFSYTGAFSAIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>NZ_LS483319.1|WP_000505965.1|1049950_1050493_+|hypothetical-protein
MGFKNNLTSNLTNKIGNSVFKIENVDGKGAMPTTIQELRERRQRAEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVKERIMSAAAIQGSQFIGKRISNAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYFMNKIGKDHIQKCENVIKNVM
>NZ_LS483319.1|WP_000437472.1|1050646_1050913_+|phosphocarrier-protein-HPr
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
>NZ_LS483319.1|WP_000040054.1|1050915_1052634_+|phosphoenolpyruvate--protein-phosphotransferase
MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAKFNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMGGKRVVVRTLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIELVNNYVK
>NZ_LS483319.1|WP_001289614.1|1052870_1053104_-|glutaredoxin-like-protein-NrdH
MSEIIVYTQNDCPPCTFVKNYLNEHHIDFEERNINNQQYRNEMIDFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD
>NZ_LS483319.1|WP_000381849.1|1053301_1054663_+|cytochrome-ubiquinol-oxidase-subunit-I
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
>NZ_LS483319.1|WP_000638456.1|1054659_1055679_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFGISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS
>NZ_LS483319.1|WP_000514290.1|1055811_1056474_+|TrkA-family-potassium-uptake-protein
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR

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Crispr_ID: NZ_LS483319_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_9

1990686-1990872

Orphan

Consensus_repeat	Method
TCTATGTTGGGGCCCCGCC	CRT

3 spacers

The CRISPR arrays of NZ_LS483319_9

>merge|NZ_LS483319|9|1990686-1990872|CRT
TCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCACTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCACCCCAACTTGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTATGTTGGGGCCCCGCC

>NZ_LS483319|9|2|1990686-1990872|CRT
TCTATGTTGGGGCCCCGCC	AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC
ACTATGTTGGGGCCCCGCC	AACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCT
TCTGTGTTGGGGCCCACCC	CAACTTGCATTGTCTGTAGAATTTCTTTTTGAAATTC
TCTATGTTGGGGCCCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000584398.1\|1996585_1997092_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001239288.1\|1982192_1983140_+\|TDT-family-transporter	unknown	unknown	gnl\|CDD\|187765
NZ_LS483319.1\|WP_000739523.1\|1988101_1988827_+\|superantigen-like-protein-SSL14	unknown	unknown	gnl\|CDD\|171855
NZ_LS483319.1\|WP_001063559.1\|1988921_1989647_+\|superantigen-like-protein-SSL13	unknown	unknown	gnl\|CDD\|106307
NZ_LS483319.1\|WP_000149423.1\|1983444_1983672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000041896.1\|1989754_1990471_+\|superantigen-like-protein-SSL12	unknown	unknown	gnl\|CDD\|171995
NZ_LS483319.1\|WP_000791587.1\|1995829_1996327_-\|complement-convertase-inhibitor-Efb	unknown	unknown	gnl\|CDD\|289007
NZ_LS483319.1\|WP_001802045.1\|1991027_1991252_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000857483.1\|1992027_1992987_+\|alpha-hemolysin	unknown	unknown	gnl\|CDD\|273388
NZ_LS483319.1\|WP_000765708.1\|1991208_1991355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001032814.1\|1994318_1994504_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000669537.1\|1995325_1995676_-\|complement-inhibitor-SCIN-B	unknown	unknown	gnl\|CDD\|371594
NZ_LS483319.1\|WP_001074342.1\|1985707_1986640_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_LS483319.1\|WP_000398672.1\|1980709_1980844_-\|beta-class-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|368464
NZ_LS483319.1\|WP_000793605.1\|1986662_1987664_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235269
NZ_LS483319.1\|WP_000432077.1\|1983979_1985536_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_LS483319.1\|WP_000231632.1\|1993463_1993697_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001791789.1\|1998124_1998217_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001245802.1\|1981755_1981944_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225382
NZ_LS483319.1\|WP_049314188.1\|1997763_1998165_+\|formyl-peptide-receptor-like-1-inhibitory-protein	unknown	unknown	gnl\|CDD\|171849

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_001239288.1\|1982192_1983140_+\|TDT-family-transporter	gnl\|CDD\|187765	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. This subfamily contains bacterial C4-dicarboxylate transporters, which is part of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. It includes Tellurite resistance protein tehA; the tehA gene encodes an integral membrane protein that has been shown to have efflux activity of quaternary ammonium compounds. TehA protein of Escherichia coli functions as a tellurite-resistance uptake permease.	1.39126e-83
NZ_LS483319.1\|WP_000739523.1\|1988101_1988827_+\|superantigen-like-protein-SSL14	gnl\|CDD\|171855	PRK13043, PRK13043, superantigen-like protein; Reviewed.	8.18566e-161
NZ_LS483319.1\|WP_001063559.1\|1988921_1989647_+\|superantigen-like-protein-SSL13	gnl\|CDD\|106307	PRK13349, PRK13349, superantigen-like protein; Reviewed.	1.29834e-148
NZ_LS483319.1\|WP_000041896.1\|1989754_1990471_+\|superantigen-like-protein-SSL12	gnl\|CDD\|171995	PRK13350, PRK13350, superantigen-like protein; Reviewed.	1.29441e-152
NZ_LS483319.1\|WP_000791587.1\|1995829_1996327_-\|complement-convertase-inhibitor-Efb	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	5.40265e-27
NZ_LS483319.1\|WP_000857483.1\|1992027_1992987_+\|alpha-hemolysin	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	4.27434e-141
NZ_LS483319.1\|WP_000669537.1\|1995325_1995676_-\|complement-inhibitor-SCIN-B	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	2.0882e-48
NZ_LS483319.1\|WP_001074342.1\|1985707_1986640_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_LS483319.1\|WP_000398672.1\|1980709_1980844_-\|beta-class-phenol-soluble-modulin	gnl\|CDD\|368464	pfam05480, Staph_haemo, Staphylococcus haemolytic protein. This family consists of several different short Staphylococcal proteins, it contains SLUSH A, B and C proteins as well as haemolysin and gonococcal growth inhibitor. Some strains of the coagulase-negative Staphylococcus lugdunensis produce a synergistic hemolytic activity (SLUSH), phenotypically similar to the delta-hemolysin of S. aureus. Gonococcal growth inhibitor from Staphylococcus act on the cytoplasmic membrane of the gonococcal cell causing cytoplasmic leakage and, eventually, death.	6.35158e-13
NZ_LS483319.1\|WP_000793605.1\|1986662_1987664_-\|ornithine-carbamoyltransferase	gnl\|CDD\|235269	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional.	0
NZ_LS483319.1\|WP_000432077.1\|1983979_1985536_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_LS483319.1\|WP_001245802.1\|1981755_1981944_-\|hypothetical-protein	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	0.00787195
NZ_LS483319.1\|WP_049314188.1\|1997763_1998165_+\|formyl-peptide-receptor-like-1-inhibitory-protein	gnl\|CDD\|171849	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed.	8.77023e-77

>NZ_LS483319.1|WP_000041896.1|1989754_1990471_+|superantigen-like-protein-SSL12
MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
>NZ_LS483319.1|WP_001063559.1|1988921_1989647_+|superantigen-like-protein-SSL13
MNNNITKKIILSTTLLLLGTASTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPSTDANRYVKKPQNAKIEVILEKSN
>NZ_LS483319.1|WP_000739523.1|1988101_1988827_+|superantigen-like-protein-SSL14
MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHFSLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKSN
>NZ_LS483319.1|WP_000793605.1|1986662_1987664_-|ornithine-carbamoyltransferase
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
>NZ_LS483319.1|WP_001074342.1|1985707_1986640_-|carbamate-kinase
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
>NZ_LS483319.1|WP_000432077.1|1983979_1985536_-|YfcC-family-protein
MENTINESEKKKRFKLKMPGAFMILFILTVVAVIATWVIPAGAYSKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTYERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKTKGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASSVGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKNDPKASYSYEDKDAFEQQWSVLKDDDSAHFTLRKKIILTLFVLPFPIMVWGVMTQGWWFPVMASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEGMISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGGVLITQVLIYS
>NZ_LS483319.1|WP_000149423.1|1983444_1983672_-|hypothetical-protein
MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWNLRWYLLENIPHLPIILFILMFIFGVPSEMIKDRQRKNNGV
>NZ_LS483319.1|WP_001239288.1|1982192_1983140_+|TDT-family-transporter
MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMIKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYLKDFSLKNVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTVIYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVIIFLLLAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKGLLFIEVLLATVIVLRVFIGYLHFFLKKEKQDKFLRNASQ
>NZ_LS483319.1|WP_001245802.1|1981755_1981944_-|hypothetical-protein
MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKNERSLDNMSLKNAELLYKFANSIFSNEN
>NZ_LS483319.1|WP_000398672.1|1980709_1980844_-|beta-class-phenol-soluble-modulin
MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
>NZ_LS483319.1|WP_001802045.1|1991027_1991252_-|hypothetical-protein
MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQDLRNGKTKLEDARFRTIIKLYSYYVSLKEH
>NZ_LS483319.1|WP_000765708.1|1991208_1991355_-|hypothetical-protein
MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKNDRVE
>NZ_LS483319.1|WP_000857483.1|1992027_1992987_+|alpha-hemolysin
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWIDRSSERYKIDWEKEEMTN
>NZ_LS483319.1|WP_000231632.1|1993463_1993697_+|hypothetical-protein
MVFNDWEINVVYSGEHEVVTNEKSLFVIDEFYDVAIAIYYLDGKLKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH
>NZ_LS483319.1|WP_001032814.1|1994318_1994504_+|hypothetical-protein
MNKHINKKAAKLLEDYKKVQQRKSKETDRGCLKSVIMLIVLFFLIIFGIVACSTNVNFFFQ
>NZ_LS483319.1|WP_000669537.1|1995325_1995676_-|complement-inhibitor-SCIN-B
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
>NZ_LS483319.1|WP_000791587.1|1995829_1996327_-|complement-convertase-inhibitor-Efb
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
>NZ_LS483319.1|WP_000584398.1|1996585_1997092_-|hypothetical-protein
MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
>NZ_LS483319.1|WP_049314188.1|1997763_1998165_+|formyl-peptide-receptor-like-1-inhibitory-protein
MKKNITKTIIASTVIAAGLLTQTNDAKAFFSYEWKGLEIAKNLADQAKKDDERIDKLMKEFDKNLTPYKAETVNDLYLIVKKLSQGDVKKAVVRIKDGGPRDYYTFDLTRPLEENRKNIKVVKNGEIDSITWY
>NZ_LS483319.1|WP_001791789.1|1998124_1998217_+|hypothetical-protein
MLKTVKSTRLLGIKKHTELNSCTPNVRKQC

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Crispr_ID: NZ_LS483319_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_10

1994722-1994966

Orphan

Consensus_repeat	Method
CCCCGCCAACTTGCANNNT	CRT

4 spacers

The CRISPR arrays of NZ_LS483319_10

>merge|NZ_LS483319|10|1994722-1994966|CRT
CCCCGCCAACTTGCACATTTTTGTAAGCTGACTTTTCGCCAGCTTCTATATTGGGGCCCCCGCCAACTTGCATTGTTTGTTGGAATTGGTGATCCTATTTCTCTCTGTTGGGGCCCCGCCAACTTGCACATTTTTGTATGCTGACTTTTCGCCAGCTTCTGTGTTGGGCCCCACCCCAACTTGCATTGTCTGTTGAAATTGGTGATCCTATTTCTCTCTGTTGGGGCCCCGCCAACTTGCATTGT

>NZ_LS483319|10|3|1994722-1994966|CRT
CCCCGCCAACTTGCACATT	TTTGTAAGCTGACTTTTCGCCAGCTTCTATATTGGGGC
CCCCGCCAACTTGCATTGT	TTGTTGGAATTGGTGATCCTATTTCTCTCTGTTGGGG
CCCCGCCAACTTGCACATT	TTTGTATGCTGACTTTTCGCCAGCTTCTGTGTTGGGCC
CCACCCCAACTTGCATTGT	CTGTTGAAATTGGTGATCCTATTTCTCTCTGTTGGGG
CCCCGCCAACTTGCATTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_000584398.1\|1996585_1997092_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000739209.1\|1998533_1998863_-\|complement-convertase-inhibitor-Ecb	unknown	unknown	gnl\|CDD\|289007
NZ_LS483319.1\|WP_000659317.1\|1999847_2000435_-\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|184835
NZ_LS483319.1\|WP_000793605.1\|1986662_1987664_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235269
NZ_LS483319.1\|WP_000739523.1\|1988101_1988827_+\|superantigen-like-protein-SSL14	unknown	unknown	gnl\|CDD\|171855
NZ_LS483319.1\|WP_001039659.1\|2000446_2001247_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_LS483319.1\|WP_001063559.1\|1988921_1989647_+\|superantigen-like-protein-SSL13	unknown	unknown	gnl\|CDD\|106307
NZ_LS483319.1\|WP_000041896.1\|1989754_1990471_+\|superantigen-like-protein-SSL12	unknown	unknown	gnl\|CDD\|171995
NZ_LS483319.1\|WP_000791587.1\|1995829_1996327_-\|complement-convertase-inhibitor-Efb	unknown	unknown	gnl\|CDD\|289007
NZ_LS483319.1\|WP_001802045.1\|1991027_1991252_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000857483.1\|1992027_1992987_+\|alpha-hemolysin	unknown	unknown	gnl\|CDD\|273388
NZ_LS483319.1\|WP_000765708.1\|1991208_1991355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000669537.1\|1995325_1995676_-\|complement-inhibitor-SCIN-B	unknown	unknown	gnl\|CDD\|371594
NZ_LS483319.1\|WP_000231632.1\|1993463_1993697_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001074342.1\|1985707_1986640_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_LS483319.1\|WP_001032814.1\|1994318_1994504_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000049484.1\|1999351_1999855_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|223695
NZ_LS483319.1\|WP_001791789.1\|1998124_1998217_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_049314188.1\|1997763_1998165_+\|formyl-peptide-receptor-like-1-inhibitory-protein	unknown	unknown	gnl\|CDD\|171849
NZ_LS483319.1\|WP_001791787.1\|1999056_1999224_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000739209.1\|1998533_1998863_-\|complement-convertase-inhibitor-Ecb	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	4.63429e-22
NZ_LS483319.1\|WP_000659317.1\|1999847_2000435_-\|XTP/dITP-diphosphatase	gnl\|CDD\|184835	PRK14822, PRK14822, XTP/dITP diphosphatase.	1.88157e-114
NZ_LS483319.1\|WP_000739523.1\|1988101_1988827_+\|superantigen-like-protein-SSL14	gnl\|CDD\|171855	PRK13043, PRK13043, superantigen-like protein; Reviewed.	8.18566e-161
NZ_LS483319.1\|WP_001063559.1\|1988921_1989647_+\|superantigen-like-protein-SSL13	gnl\|CDD\|106307	PRK13349, PRK13349, superantigen-like protein; Reviewed.	1.29834e-148
NZ_LS483319.1\|WP_000793605.1\|1986662_1987664_-\|ornithine-carbamoyltransferase	gnl\|CDD\|235269	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional.	0
NZ_LS483319.1\|WP_000041896.1\|1989754_1990471_+\|superantigen-like-protein-SSL12	gnl\|CDD\|171995	PRK13350, PRK13350, superantigen-like protein; Reviewed.	1.29441e-152
NZ_LS483319.1\|WP_000049484.1\|1999351_1999855_-\|metallophosphoesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	9.91823e-44
NZ_LS483319.1\|WP_000857483.1\|1992027_1992987_+\|alpha-hemolysin	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	4.27434e-141
NZ_LS483319.1\|WP_000669537.1\|1995325_1995676_-\|complement-inhibitor-SCIN-B	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	2.0882e-48
NZ_LS483319.1\|WP_001074342.1\|1985707_1986640_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_LS483319.1\|WP_000791587.1\|1995829_1996327_-\|complement-convertase-inhibitor-Efb	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	5.40265e-27
NZ_LS483319.1\|WP_001039659.1\|2000446_2001247_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	2.38427e-134
NZ_LS483319.1\|WP_049314188.1\|1997763_1998165_+\|formyl-peptide-receptor-like-1-inhibitory-protein	gnl\|CDD\|171849	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed.	8.77023e-77

>NZ_LS483319.1|WP_001032814.1|1994318_1994504_+|hypothetical-protein
MNKHINKKAAKLLEDYKKVQQRKSKETDRGCLKSVIMLIVLFFLIIFGIVACSTNVNFFFQ
>NZ_LS483319.1|WP_000231632.1|1993463_1993697_+|hypothetical-protein
MVFNDWEINVVYSGEHEVVTNEKSLFVIDEFYDVAIAIYYLDGKLKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH
>NZ_LS483319.1|WP_000857483.1|1992027_1992987_+|alpha-hemolysin
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWIDRSSERYKIDWEKEEMTN
>NZ_LS483319.1|WP_000765708.1|1991208_1991355_-|hypothetical-protein
MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKNDRVE
>NZ_LS483319.1|WP_001802045.1|1991027_1991252_-|hypothetical-protein
MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQDLRNGKTKLEDARFRTIIKLYSYYVSLKEH
>NZ_LS483319.1|WP_000041896.1|1989754_1990471_+|superantigen-like-protein-SSL12
MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
>NZ_LS483319.1|WP_001063559.1|1988921_1989647_+|superantigen-like-protein-SSL13
MNNNITKKIILSTTLLLLGTASTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPSTDANRYVKKPQNAKIEVILEKSN
>NZ_LS483319.1|WP_000739523.1|1988101_1988827_+|superantigen-like-protein-SSL14
MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHFSLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKSN
>NZ_LS483319.1|WP_000793605.1|1986662_1987664_-|ornithine-carbamoyltransferase
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
>NZ_LS483319.1|WP_001074342.1|1985707_1986640_-|carbamate-kinase
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
>NZ_LS483319.1|WP_000669537.1|1995325_1995676_-|complement-inhibitor-SCIN-B
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
>NZ_LS483319.1|WP_000791587.1|1995829_1996327_-|complement-convertase-inhibitor-Efb
MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
>NZ_LS483319.1|WP_000584398.1|1996585_1997092_-|hypothetical-protein
MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
>NZ_LS483319.1|WP_049314188.1|1997763_1998165_+|formyl-peptide-receptor-like-1-inhibitory-protein
MKKNITKTIIASTVIAAGLLTQTNDAKAFFSYEWKGLEIAKNLADQAKKDDERIDKLMKEFDKNLTPYKAETVNDLYLIVKKLSQGDVKKAVVRIKDGGPRDYYTFDLTRPLEENRKNIKVVKNGEIDSITWY
>NZ_LS483319.1|WP_001791789.1|1998124_1998217_+|hypothetical-protein
MLKTVKSTRLLGIKKHTELNSCTPNVRKQC
>NZ_LS483319.1|WP_000739209.1|1998533_1998863_-|complement-convertase-inhibitor-Ecb
MKKNFIGKSILSIAAISLTVSTFAGESHAQTKNVEAAKKYDQYQTNFKKQVNKKVVDAQKAVNFFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLVLKYNTLK
>NZ_LS483319.1|WP_001791787.1|1999056_1999224_-|hypothetical-protein
MKRIVILENVIVDNPIWLNHVDYLVKSVLLKSIKLRFQEVRKFEILVKIMNRIHI
>NZ_LS483319.1|WP_000049484.1|1999351_1999855_-|metallophosphoesterase
MSKWIIVSDNHTESGVLYQIYEMHPDADVYLHLGDSEFAYDDTELSLFNRVKGNCDFYPEFENEAVAKYNDVKAFYTHGHLYQVNRTRDLLAEKGLELGCLFAFYGHTHVAKYEYINGVHVINPGSISQSRSSMEETYAEVIIDDQTLHGTINFKNRHHETISHTTF
>NZ_LS483319.1|WP_000659317.1|1999847_2000435_-|XTP/dITP-diphosphatase
MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGDKNV
>NZ_LS483319.1|WP_001039659.1|2000446_2001247_-|glutamate-racemase
MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND

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Crispr_ID: NZ_LS483319_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_11

2336847-2336997

Orphan

Consensus_repeat	Method
AACTTTAGTTGTTAGGGGCTCTTATGCA	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of NZ_LS483319_11

>merge|NZ_LS483319|11|2336847-2336997|CRISPRCasFinder
AACTTTAGTTGTTAGGGGCTCTTATGCATGCGCTTAGCGCAGGCGCTCCTACTTTTAAACTTTAGTTGTTAGGGGCTCTTATGCAGTTGATGCGTAGCATCCAACTGTGTTCCTCTATTTTTCAACTTTAGTTGTTAGGGGCTTCTTTCTA

>NZ_LS483319|11|8|2336847-2336997|CRISPRCasFinder
AACTTTAGTTGTTAGGGGCTCTTATGCA	TGCGCTTAGCGCAGGCGCTCCTACTTTTA
AACTTTAGTTGTTAGGGGCTCTTATGCA	GTTGATGCGTAGCATCCAACTGTGTTCCTCTATTTTTC
AACTTTAGTTGTTAGGGGCTTCTTTCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_001790138.1\|2339544_2339637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001802298.1\|2337328_2337433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000927363.1\|2346339_2348472_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_LS483319.1\|WP_111759477.1\|2329673_2331047_-\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_LS483319.1\|WP_000003759.1\|2334169_2334490_+\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_LS483319.1\|WP_000019744.1\|2334491_2335472_+\|CDF-family-zinc-efflux-transporter-CzrB	unknown	unknown	gnl\|CDD\|224151
NZ_LS483319.1\|WP_000070866.1\|2328159_2328603_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_LS483319.1\|WP_000808817.1\|2331718_2331949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001123303.1\|2328802_2329216_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NZ_LS483319.1\|WP_000648718.1\|2348917_2350024_+\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_LS483319.1\|WP_000083807.1\|2344766_2346305_+\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_LS483319.1\|WP_000370924.1\|2340341_2341199_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_LS483319.1\|WP_000495671.1\|2335737_2336829_+\|lytic-regulatory-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000115564.1\|2338119_2339256_-\|SAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366887
NZ_LS483319.1\|WP_000160304.1\|2327328_2328039_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_LS483319.1\|WP_000334465.1\|2342280_2344086_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_LS483319.1\|WP_001292149.1\|2348483_2348918_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|227014
NZ_LS483319.1\|WP_045177733.1\|2333352_2334018_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_LS483319.1\|WP_001127960.1\|2331979_2332918_-\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
NZ_LS483319.1\|WP_000908176.1\|2341266_2342049_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_000927363.1\|2346339_2348472_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	4.09729e-67
NZ_LS483319.1\|WP_111759477.1\|2329673_2331047_-\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	4.10195e-06
NZ_LS483319.1\|WP_000003759.1\|2334169_2334490_+\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
NZ_LS483319.1\|WP_000019744.1\|2334491_2335472_+\|CDF-family-zinc-efflux-transporter-CzrB	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.049e-108
NZ_LS483319.1\|WP_000070866.1\|2328159_2328603_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
NZ_LS483319.1\|WP_001123303.1\|2328802_2329216_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	3.14887e-46
NZ_LS483319.1\|WP_000648718.1\|2348917_2350024_+\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_LS483319.1\|WP_000083807.1\|2344766_2346305_+\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_LS483319.1\|WP_000370924.1\|2340341_2341199_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.39747e-59
NZ_LS483319.1\|WP_000115564.1\|2338119_2339256_-\|SAP-domain-containing-protein	gnl\|CDD\|366887	pfam02037, SAP, SAP domain. The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.	3.91533e-06
NZ_LS483319.1\|WP_000160304.1\|2327328_2328039_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
NZ_LS483319.1\|WP_000334465.1\|2342280_2344086_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_LS483319.1\|WP_001292149.1\|2348483_2348918_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_LS483319.1\|WP_045177733.1\|2333352_2334018_-\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.24936e-47
NZ_LS483319.1\|WP_001127960.1\|2331979_2332918_-\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	7.24075e-129
NZ_LS483319.1\|WP_000908176.1\|2341266_2342049_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	4.88024e-103

>NZ_LS483319.1|WP_000495671.1|2335737_2336829_+|lytic-regulatory-protein
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKVTTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>NZ_LS483319.1|WP_000019744.1|2334491_2335472_+|CDF-family-zinc-efflux-transporter-CzrB
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH
>NZ_LS483319.1|WP_000003759.1|2334169_2334490_+|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>NZ_LS483319.1|WP_045177733.1|2333352_2334018_-|SDR-family-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGIRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGDQDIKDALTQFENETD
>NZ_LS483319.1|WP_001127960.1|2331979_2332918_-|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>NZ_LS483319.1|WP_000808817.1|2331718_2331949_-|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>NZ_LS483319.1|WP_111759477.1|2329673_2331047_-|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVEIGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRISNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>NZ_LS483319.1|WP_001123303.1|2328802_2329216_-|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>NZ_LS483319.1|WP_000070866.1|2328159_2328603_-|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>NZ_LS483319.1|WP_000160304.1|2327328_2328039_+|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
>NZ_LS483319.1|WP_001802298.1|2337328_2337433_-|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_LS483319.1|WP_000115564.1|2338119_2339256_-|SAP-domain-containing-protein
MSVNARDLLVLHTNVNRLVGEEIFANKCLANNDVQIMNSIKKLIEAELLTTTNDFEVSIYKKTRPELQSILKSFGIKTTGNKPDLIKRIDDNFHIINNLDLPYVYIPTKKGEEILKKTEYLTSFIQSYGEISLERAYYLVENYIDENCDDKVAEIYKFEFQRKYDNGEFDFNHGYNFELNMLIDHYKRDVKDYDNARKYSNIYLYFGLRDFLKKLMSNYSYYDSKGNIDLNEIQNDLNRFINSSASGMYERLIYNENLSNNIMFELFKKDTQDYSDLEEQLIEKFINYVVSNVKKESRSNTLIELSKILENGYTIDKEEFKKEDDYLSKYIFTDIDYLKKLESKINVAIDIRSGEIHLVLDDDSLDILIQNQKYGNEF
>NZ_LS483319.1|WP_001790138.1|2339544_2339637_+|hypothetical-protein
MFIFKTTSKSHFHNNVKSLECIKIPINKNR
>NZ_LS483319.1|WP_000370924.1|2340341_2341199_-|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
>NZ_LS483319.1|WP_000908176.1|2341266_2342049_-|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMFAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_LS483319.1|WP_000334465.1|2342280_2344086_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_LS483319.1|WP_000083807.1|2344766_2346305_+|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_LS483319.1|WP_000927363.1|2346339_2348472_+|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLLHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFISDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_LS483319.1|WP_001292149.1|2348483_2348918_+|PTS-sugar-transporter-subunit-IIA
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_LS483319.1|WP_000648718.1|2348917_2350024_+|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFAGKATVLDAVEDSSIEAGLRRVLAETSQYITNEFDFTEAEQAAYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS

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Crispr_ID: NZ_LS483319_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483319_12

2461011-2461204

Orphan

Consensus_repeat	Method
TGTTGGGGCCCCGCCAACTTGCA	CRT

3 spacers

The CRISPR arrays of NZ_LS483319_12

>merge|NZ_LS483319|12|2461011-2461204|CRT
TGTTGGGGCCCCGCCAACTTGCACATTATTGTATGCTGACTTTTCGTCACCTTCTGTGTTGGGGCCCCGTTCCCCAACTTGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCTGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGTA

>NZ_LS483319|12|4|2461011-2461204|CRT
TGTTGGGGCCCCGCCAACTTGCA	CATTATTGTATGCTGACTTTTCGTCACCTTCTG
TGTTGGGGCCCCGTTCCCCAACT	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA
TGTTGGGGCCCCGCCAACTTGCA	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG
TGTTGGGGCCCCGCCAACTTGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483319.1\|WP_061642031.1\|2466529_2467534_-\|ThiF-family-adenylyltransferase	unknown	unknown	gnl\|CDD\|181084
NZ_LS483319.1\|WP_001549681.1\|2457389_2457641_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_001790034.1\|2460780_2460951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000066900.1\|2460304_2460655_-\|HTH-type-transcriptional-regulator-SarV	unknown	unknown	gnl\|CDD\|130944
NZ_LS483319.1\|WP_000134528.1\|2465496_2465991_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_LS483319.1\|WP_000913019.1\|2467703_2468309_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226628
NZ_LS483319.1\|WP_000051206.1\|2451538_2451703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000184419.1\|2458991_2460203_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_LS483319.1\|WP_000602937.1\|2463692_2464178_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|224677
NZ_LS483319.1\|WP_000230173.1\|2461345_2462368_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_LS483319.1\|WP_000600967.1\|2457632_2458397_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_LS483319.1\|WP_000808500.1\|2463232_2463679_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_LS483319.1\|WP_000503817.1\|2465992_2466499_-\|molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl\|CDD\|223595
NZ_LS483319.1\|WP_000259718.1\|2464174_2465434_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_LS483319.1\|WP_000592303.1\|2452451_2455619_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_LS483319.1\|WP_000413865.1\|2455735_2457001_-\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_LS483319.1\|WP_000643988.1\|2462387_2462987_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_LS483319.1\|WP_000951058.1\|2458558_2458999_+\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|197670
NZ_LS483319.1\|WP_001161085.1\|2451947_2452265_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483319.1\|WP_000866971.1\|2462993_2463227_-\|molybdopterin-converting-factor-subunit-1	unknown	unknown	gnl\|CDD\|340452

Protein	Function_ID	Function_description	E-value
NZ_LS483319.1\|WP_061642031.1\|2466529_2467534_-\|ThiF-family-adenylyltransferase	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	4.78962e-132
NZ_LS483319.1\|WP_000066900.1\|2460304_2460655_-\|HTH-type-transcriptional-regulator-SarV	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	2.64009e-20
NZ_LS483319.1\|WP_000134528.1\|2465496_2465991_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	3.63862e-98
NZ_LS483319.1\|WP_000913019.1\|2467703_2468309_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	3.32197e-115
NZ_LS483319.1\|WP_000602937.1\|2463692_2464178_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|224677	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism].	4.35501e-50
NZ_LS483319.1\|WP_000230173.1\|2461345_2462368_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.0538e-165
NZ_LS483319.1\|WP_000600967.1\|2457632_2458397_-\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.50083e-38
NZ_LS483319.1\|WP_000808500.1\|2463232_2463679_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.56799e-58
NZ_LS483319.1\|WP_000503817.1\|2465992_2466499_-\|molybdenum-cofactor-biosynthesis-protein-MoaB	gnl\|CDD\|223595	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism].	1.02752e-64
NZ_LS483319.1\|WP_000259718.1\|2464174_2465434_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	9.49423e-160
NZ_LS483319.1\|WP_000592303.1\|2452451_2455619_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_LS483319.1\|WP_000413865.1\|2455735_2457001_-\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	4.8324e-143
NZ_LS483319.1\|WP_000643988.1\|2462387_2462987_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.68918e-67
NZ_LS483319.1\|WP_000951058.1\|2458558_2458999_+\|winged-helix-DNA-binding-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.35323e-15
NZ_LS483319.1\|WP_000184419.1\|2458991_2460203_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.27961e-72
NZ_LS483319.1\|WP_000866971.1\|2462993_2463227_-\|molybdopterin-converting-factor-subunit-1	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	8.16473e-25

>NZ_LS483319.1|WP_001790034.1|2460780_2460951_+|hypothetical-protein
MFRFISFGQLVVYSTTFIPKKDILQLNGMECDINVKEPLKIYYVVILKSGIEMIFS
>NZ_LS483319.1|WP_000066900.1|2460304_2460655_-|HTH-type-transcriptional-regulator-SarV
MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLLDKITKEIEVLSVTN
>NZ_LS483319.1|WP_000184419.1|2458991_2460203_+|MFS-transporter
MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
>NZ_LS483319.1|WP_000951058.1|2458558_2458999_+|winged-helix-DNA-binding-protein
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>NZ_LS483319.1|WP_000600967.1|2457632_2458397_-|VOC-family-protein
MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
>NZ_LS483319.1|WP_001549681.1|2457389_2457641_+|hypothetical-protein
MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILSIFFILIKSSRLNNILTILSIVLVIIHMGILAHSTYVYLY
>NZ_LS483319.1|WP_000413865.1|2455735_2457001_-|lipid-II:glycine-glycyltransferase-FemX
MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEVQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMKTSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKRK
>NZ_LS483319.1|WP_000592303.1|2452451_2455619_-|efflux-RND-transporter-permease-subunit
MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQNPVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTDMDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQLIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGLFQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASPQQNSKASAPNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQVAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLRNIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYRRLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAIAFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWIVIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKYLKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKHPGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTYDQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWSEDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAKVTNKDVGGTTRQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLAPFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQGMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISSTLLTLVVVPVIYEILFTLKKRFTKR
>NZ_LS483319.1|WP_001161085.1|2451947_2452265_+|hypothetical-protein
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
>NZ_LS483319.1|WP_000051206.1|2451538_2451703_+|hypothetical-protein
MSLENQLAELKYDYVRLQGDIEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD
>NZ_LS483319.1|WP_000230173.1|2461345_2462368_-|GTP-3',8-cyclase-MoaA
MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG
>NZ_LS483319.1|WP_000643988.1|2462387_2462987_-|molybdenum-cofactor-guanylyltransferase-MobA
MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNEIIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMITGKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFKNVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL
>NZ_LS483319.1|WP_000866971.1|2462993_2463227_-|molybdopterin-converting-factor-subunit-1
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
>NZ_LS483319.1|WP_000808500.1|2463232_2463679_-|molybdenum-cofactor-biosynthesis-protein-MoaE
MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE
>NZ_LS483319.1|WP_000602937.1|2463692_2464178_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDIQLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEGFKNADFEKVVVYRNEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQLT
>NZ_LS483319.1|WP_000259718.1|2464174_2465434_-|molybdopterin-molybdotransferase-MoeA
MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVRIMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALAEKLGLEVGIYKTQKDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAEVLFNKVAMRPGSVTTVAFVDGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQIIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPGGSRGFKAGHTVDIILTESDAAEEELLL
>NZ_LS483319.1|WP_000134528.1|2465496_2465991_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIFKQISNNTNTKGNVLNTAQIAGIMAAKNTSTLIPMCHPLPLTGIDVHFSWDETNAPLYTLNIQTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQRQSNQ
>NZ_LS483319.1|WP_000503817.1|2465992_2466499_-|molybdenum-cofactor-biosynthesis-protein-MoaB
MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEIDGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
>NZ_LS483319.1|WP_061642031.1|2466529_2467534_-|ThiF-family-adenylyltransferase
MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGLVRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDYIAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKYRIPWIYGGVVQSTYTEAAFIPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITYGDIWEGSHYSFGFSKMQRSDCTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENASITHDILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRKSDATHLMNLLFG
>NZ_LS483319.1|WP_000913019.1|2467703_2468309_-|ATP-binding-cassette-domain-containing-protein
MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	2906093-2906121	0	1.0
NZ_LS483319_6	6.1\|864075\|34\|NZ_LS483319\|CRISPRCasFinder	864075-864108	34	NZ_LS483319.1	1686115-1686148	0	1.0
NZ_LS483319_6	6.1\|864075\|34\|NZ_LS483319\|CRISPRCasFinder	864075-864108	34	NZ_LS483319.1	1775300-1775333	0	1.0
NZ_LS483319_7	7.1\|912924\|26\|NZ_LS483319\|CRT	912924-912949	26	NZ_LS483319.1	912868-912893	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	137835-137871	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	653974-654010	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	773419-773455	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	774389-774425	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	820910-820946	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	1686132-1686168	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	1775280-1775316	0	1.0
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	2082874-2082910	0	1.0
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	358074-358110	0	1.0
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	820854-820890	0	1.0
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	1030334-1030370	0	1.0
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	1775338-1775374	0	1.0
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	2081417-2081453	0	1.0
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	358191-358219	1	0.966
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	358246-358274	1	0.966
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	1287562-1287590	1	0.966
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	783874-783899	1	0.962
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	1990677-1990702	1	0.962
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	2906005-2906030	1	0.962
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	2906061-2906086	1	0.962
NZ_LS483319_7	7.2\|912980\|26\|NZ_LS483319\|CRT	912980-913005	26	NZ_LS483319.1	912868-912893	1	0.962
NZ_LS483319_7	7.4\|913094\|26\|NZ_LS483319\|CRT	913094-913119	26	NZ_LS483319.1	820882-820907	1	0.962
NZ_LS483319_7	7.4\|913094\|26\|NZ_LS483319\|CRT	913094-913119	26	NZ_LS483319.1	2081445-2081470	1	0.962
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	1056530-1056566	1	0.973
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	2628478-2628514	1	0.973
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	1493376-1493412	1	0.973
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	1686074-1686110	1	0.973
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	2740668-2740704	1	0.973
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	1287557-1287593	1	0.973
NZ_LS483319_12	12.2\|2461090\|36\|NZ_LS483319\|CRT	2461090-2461125	36	NZ_LS483319.1	1287562-1287597	1	0.972
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	864117-864145	2	0.931
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	932619-932647	2	0.931
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	1493437-1493465	2	0.931
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	2092169-2092197	2	0.931
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	NZ_LS483319.1	2653764-2653792	2	0.931
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	783930-783955	2	0.923
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_LS483319.1	912868-912893	2	0.923
NZ_LS483319_7	7.1\|912924\|26\|NZ_LS483319\|CRT	912924-912949	26	NZ_LS483319.1	864410-864435	2	0.923
NZ_LS483319_7	7.2\|912980\|26\|NZ_LS483319\|CRT	912980-913005	26	NZ_LS483319.1	783874-783899	2	0.923
NZ_LS483319_7	7.2\|912980\|26\|NZ_LS483319\|CRT	912980-913005	26	NZ_LS483319.1	1990677-1990702	2	0.923
NZ_LS483319_7	7.2\|912980\|26\|NZ_LS483319\|CRT	912980-913005	26	NZ_LS483319.1	2906005-2906030	2	0.923
NZ_LS483319_7	7.2\|912980\|26\|NZ_LS483319\|CRT	912980-913005	26	NZ_LS483319.1	2906061-2906086	2	0.923
NZ_LS483319_7	7.4\|913094\|26\|NZ_LS483319\|CRT	913094-913119	26	NZ_LS483319.1	358057-358082	2	0.923
NZ_LS483319_9	9.1\|1990705\|37\|NZ_LS483319\|CRT	1990705-1990741	37	NZ_LS483319.1	1994673-1994709	2	0.946
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	1990649-1990685	2	0.946
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	2081358-2081394	2	0.946
NZ_LS483319_9	9.2\|1990761\|37\|NZ_LS483319\|CRT	1990761-1990797	37	NZ_LS483319.1	2906033-2906069	2	0.946
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	864112-864148	2	0.946
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	1493434-1493470	2	0.946
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	2092164-2092200	2	0.946
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	2653761-2653797	2	0.946
NZ_LS483319_9	9.3\|1990817\|37\|NZ_LS483319\|CRT	1990817-1990853	37	NZ_LS483319.1	2906088-2906124	2	0.946
NZ_LS483319_10	10.4\|1994911\|37\|NZ_LS483319\|CRT	1994911-1994947	37	NZ_LS483319.1	1994967-1995003	2	0.946
NZ_LS483319_12	12.1\|2461034\|33\|NZ_LS483319\|CRT	2461034-2461066	33	NZ_LS483319.1	820862-820894	2	0.939
NZ_LS483319_12	12.1\|2461034\|33\|NZ_LS483319\|CRT	2461034-2461066	33	NZ_LS483319.1	1686070-1686102	2	0.939
NZ_LS483319_12	12.1\|2461034\|33\|NZ_LS483319\|CRT	2461034-2461066	33	NZ_LS483319.1	1775346-1775378	2	0.939
NZ_LS483319_12	12.1\|2461034\|33\|NZ_LS483319\|CRT	2461034-2461066	33	NZ_LS483319.1	2081425-2081457	2	0.939
NZ_LS483319_12	12.1\|2461034\|33\|NZ_LS483319\|CRT	2461034-2461066	33	NZ_LS483319.1	2740676-2740708	2	0.939
NZ_LS483319_12	12.2\|2461090\|36\|NZ_LS483319\|CRT	2461090-2461125	36	NZ_LS483319.1	1493430-1493465	2	0.944
NZ_LS483319_12	12.2\|2461090\|36\|NZ_LS483319\|CRT	2461090-2461125	36	NZ_LS483319.1	2092169-2092204	2	0.944
NZ_LS483319_12	12.3\|2461149\|33\|NZ_LS483319\|CRT	2461149-2461181	33	NZ_LS483319.1	820862-820894	2	0.939
NZ_LS483319_12	12.3\|2461149\|33\|NZ_LS483319\|CRT	2461149-2461181	33	NZ_LS483319.1	1775346-1775378	2	0.939
NZ_LS483319_12	12.3\|2461149\|33\|NZ_LS483319\|CRT	2461149-2461181	33	NZ_LS483319.1	2081425-2081457	2	0.939
NZ_LS483319_12	12.3\|2461149\|33\|NZ_LS483319\|CRT	2461149-2461181	33	NZ_LS483319.1	2740676-2740708	2	0.939

1. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 2906093-2906121, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

2. spacer 6.1|864075|34|NZ_LS483319|CRISPRCasFinder matches to position: 1686115-1686148, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 6.1|864075|34|NZ_LS483319|CRISPRCasFinder matches to position: 1775300-1775333, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

4. spacer 7.1|912924|26|NZ_LS483319|CRT matches to position: 912868-912893, mismatch: 0, identity: 1.0

cggggccccaacacagaggctggtgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
**************************

5. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 137835-137871, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

6. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 653974-654010, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

7. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 773419-773455, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

8. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 774389-774425, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

9. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 820910-820946, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

10. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 1686132-1686168, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

11. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 1775280-1775316, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

12. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 2082874-2082910, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

13. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 358074-358110, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

14. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 820854-820890, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

15. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 1030334-1030370, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

16. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 1775338-1775374, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

17. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 2081417-2081453, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

18. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 358191-358219, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

19. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 358246-358274, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

20. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 1287562-1287590, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

21. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 783874-783899, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** ********************

22. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 1990677-1990702, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

23. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 2906005-2906030, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

24. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 2906061-2906086, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctttgttggggccccg	Protospacer
************ *************

25. spacer 7.2|912980|26|NZ_LS483319|CRT matches to position: 912868-912893, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
***********************.**

26. spacer 7.4|913094|26|NZ_LS483319|CRT matches to position: 820882-820907, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

27. spacer 7.4|913094|26|NZ_LS483319|CRT matches to position: 2081445-2081470, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

28. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 1056530-1056566, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttacattgtctgtagaaattgggaatccaatttc	Protospacer
*****.*******************************

29. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 2628478-2628514, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctctagaaattgggaatccaatttc	Protospacer
************** **********************

30. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 1493376-1493412, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattatagtaagctgacttttcgtcagct	Protospacer
************** **********************

31. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 1686074-1686110, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcatct	Protospacer
********************************** **

32. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 2740668-2740704, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aactcgcacattattgtaagctgacttttcgtcagct	Protospacer
****.********************************

33. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 1287557-1287593, mismatch: 1, identity: 0.973

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcttttcgaaattc	Protospacer
*****************************.*******

34. spacer 12.2|2461090|36|NZ_LS483319|CRT matches to position: 1287562-1287597, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

35. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 864117-864145, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

36. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 932619-932647, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

37. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 1493437-1493465, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

38. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 2092169-2092197, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

39. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to position: 2653764-2653792, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

40. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 783930-783955, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctatgttggggccccg	Protospacer
***** ******.*************

41. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to position: 912868-912893, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccaccagcctctgtgttggggccccg	Protospacer
**.*****.*****************

42. spacer 7.1|912924|26|NZ_LS483319|CRT matches to position: 864410-864435, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggtgg	CRISPR spacer
cggggccccaacacagaagctgatgg	Protospacer
*****************.****.***

43. spacer 7.2|912980|26|NZ_LS483319|CRT matches to position: 783874-783899, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*****************.** *****

44. spacer 7.2|912980|26|NZ_LS483319|CRT matches to position: 1990677-1990702, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

45. spacer 7.2|912980|26|NZ_LS483319|CRT matches to position: 2906005-2906030, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

46. spacer 7.2|912980|26|NZ_LS483319|CRT matches to position: 2906061-2906086, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacaaagaagctggcgg	Protospacer
************* ***.********

47. spacer 7.4|913094|26|NZ_LS483319|CRT matches to position: 358057-358082, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacaaagaagctgacga	Protospacer
************* ********.***

48. spacer 9.1|1990705|37|NZ_LS483319|CRT matches to position: 1994673-1994709, mismatch: 2, identity: 0.946

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattggggttccaatttc	Protospacer
**************************. *********

49. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 1990649-1990685, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

50. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 2081358-2081394, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacctgcacattatcgtaagctgacttttcgtcagct	Protospacer
***.**********.**********************

51. spacer 9.2|1990761|37|NZ_LS483319|CRT matches to position: 2906033-2906069, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

52. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 864112-864148, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

53. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 1493434-1493470, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

54. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 2092164-2092200, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcctttcgaaattc	Protospacer
*************************.***.*******

55. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 2653761-2653797, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

56. spacer 9.3|1990817|37|NZ_LS483319|CRT matches to position: 2906088-2906124, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtttgtagaatttcttttcgaaattc	Protospacer
*************.***************.*******

57. spacer 10.4|1994911|37|NZ_LS483319|CRT matches to position: 1994967-1995003, mismatch: 2, identity: 0.946

ctgttgaaattggtgatcctatttctctctgttgggg	CRISPR spacer
ctgttggaattggtgatcctatttctctctgttgtgg	Protospacer
******.*************************** **

58. spacer 12.1|2461034|33|NZ_LS483319|CRT matches to position: 820862-820894, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

59. spacer 12.1|2461034|33|NZ_LS483319|CRT matches to position: 1686070-1686102, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

60. spacer 12.1|2461034|33|NZ_LS483319|CRT matches to position: 1775346-1775378, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

61. spacer 12.1|2461034|33|NZ_LS483319|CRT matches to position: 2081425-2081457, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

62. spacer 12.1|2461034|33|NZ_LS483319|CRT matches to position: 2740676-2740708, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

63. spacer 12.2|2461090|36|NZ_LS483319|CRT matches to position: 1493430-1493465, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

64. spacer 12.2|2461090|36|NZ_LS483319|CRT matches to position: 2092169-2092204, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

65. spacer 12.3|2461149|33|NZ_LS483319|CRT matches to position: 820862-820894, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

66. spacer 12.3|2461149|33|NZ_LS483319|CRT matches to position: 1775346-1775378, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

67. spacer 12.3|2461149|33|NZ_LS483319|CRT matches to position: 2081425-2081457, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

68. spacer 12.3|2461149|33|NZ_LS483319|CRT matches to position: 2740676-2740708, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LS483319_7	7.5\|913150\|53\|NZ_LS483319\|CRT	913150-913202	53	MG543995	Staphylococcus phage UPMK_1, partial genome	76246-76298	4	0.925
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_CP022541	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence	333735-333760	5	0.808
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_CP034332	Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence	3359-3384	5	0.808
NZ_LS483319_5	5.1\|820826\|26\|NZ_LS483319\|CRISPRCasFinder	820826-820851	26	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	715511-715536	5	0.808
NZ_LS483319_7	7.4\|913094\|26\|NZ_LS483319\|CRT	913094-913119	26	NZ_CP022541	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence	333735-333760	5	0.808
NZ_LS483319_4	4.1\|815424\|29\|NZ_LS483319\|CRISPRCasFinder	815424-815452	29	MN693281	Marine virus AFVG_25M371, complete genome	6448-6476	7	0.759

1. spacer 7.5|913150|53|NZ_LS483319|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgagaaactatcatttctgtcccactccctt	Protospacer
************************ **** *********************

2. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

3. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtctgggcctac	Protospacer
****************. *****.

4. spacer 5.1|820826|26|NZ_LS483319|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtttggccctga	Protospacer
***************** ** **. .

5. spacer 7.4|913094|26|NZ_LS483319|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcga	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.*****************

6. spacer 4.1|815424|29|NZ_LS483319|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

750658 : 758478

Hokovirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000244412.1\|750658_751714_-	two-component system sensor histidine kinase SaeS	A0A1V0SGX0	Hokovirus	2.1e-14	30.0
WP_000149344.1\|751713_752400_-	response regulator transcription factor	NA	NA	NA	NA
WP_001037807.1\|752374_752848_-	DoxX family protein	NA	NA	NA	NA
WP_001093553.1\|753189_753630_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_000637687.1\|753909_754494_-	hypothetical protein	NA	NA	NA	NA
WP_001062972.1\|754592_755306_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000941336.1\|755309_755729_-	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_000446724.1\|755730_756399_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
WP_000604514.1\|756749_757343_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001217785.1\|757326_758478_+	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	1.6e-23	35.7

DBSCAN-SWA_2

771638 : 787032

uncultured_Caudovirales_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284571.1\|771638_773243_+\|transposase	IS1182-like element IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.1e-128	44.4
WP_000197271.1\|773709_774252_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000429014.1\|774931_775849_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	3.7e-07	22.0
WP_001790641.1\|775939_776041_+	hypothetical protein	NA	NA	NA	NA
WP_000193751.1\|776118_777624_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_000930014.1\|777964_778465_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
WP_001068497.1\|778484_779351_-	DMT family transporter	NA	NA	NA	NA
WP_000692521.1\|780152_780551_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_000855505.1\|780513_782619_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000562498.1\|782736_783708_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
WP_000499195.1\|784165_784321_+	hypothetical protein	NA	NA	NA	NA
WP_000876318.1\|784359_785331_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
WP_001245577.1\|785317_786274_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
WP_000616842.1\|786270_787032_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6

DBSCAN-SWA_3

1031846 : 1040319

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000861572.1\|1031846_1032329_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
WP_001010412.1\|1032315_1033440_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000174053.1\|1033443_1034148_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
WP_000848350.1\|1034147_1034411_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_015581815.1\|1034412_1035084_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_000032727.1\|1035076_1037266_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-140	39.7
WP_000483713.1\|1037244_1038729_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
WP_000030812.1\|1038721_1039750_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.3e-61	41.4
WP_000238664.1\|1039752_1040319_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1

DBSCAN-SWA_4

1091967 : 1172654

100

Staphylococcus_phage(79.17%)

tRNA,plate,terminase,capsid,holin,head,transposase,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000401377.1\|1091967_1092450_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2
WP_000843611.1\|1092511_1093651_-	nucleotidyltransferase	NA	NA	NA	NA
WP_000872158.1\|1093777_1094335_+	DUF177 domain-containing protein	NA	NA	NA	NA
WP_000290472.1\|1094414_1094588_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_000861313.1\|1094704_1096090_-	recombinase family protein	I1W625	Staphylococcus_phage	2.5e-265	100.0
WP_000392109.1\|1096296_1096977_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A2H4PQQ5	Staphylococcus_phage	5.1e-123	100.0
WP_000874708.1\|1097008_1097647_-	LexA family transcriptional regulator	A0EWH5	Staphylococcus_virus	1.1e-116	100.0
WP_001106626.1\|1097836_1098091_+	helix-turn-helix transcriptional regulator	C5I625	Staphylococcus_phage	1.4e-41	98.8
WP_023487065.1\|1098103_1098547_+	hypothetical protein	W5R971	Staphylococcus_phage	4.4e-75	99.3
WP_000438352.1\|1098561_1098741_+	hypothetical protein	A0A0N9BAV3	Staphylococcus_phage	1.7e-25	100.0
WP_000438628.1\|1098730_1098970_-	hypothetical protein	A0A0H3U4W2	Staphylococcus_phage	7.0e-43	100.0
WP_009560540.1\|1099026_1099779_+	phage antirepressor KilAC domain-containing protein	A0A1X9H0A0	Staphylococcus_phage	1.1e-139	99.6
WP_000395455.1\|1099945_1100176_-	hypothetical protein	C8CGY3	Staphylococcus_phage	2.3e-35	100.0
WP_000230552.1\|1100225_1100363_+	hypothetical protein	S4SX85	Staphylococcus_phage	3.2e-16	100.0
WP_000066025.1\|1100355_1100517_+	DUF1270 domain-containing protein	D2JGJ6	Staphylococcus_phage	7.2e-20	98.1
WP_000291089.1\|1100610_1100871_+	DUF1108 family protein	Q4ZBM7	Staphylococcus_phage	1.2e-43	100.0
WP_000999048.1\|1100883_1101420_+	host-nuclease inhibitor Gam family protein	A0A2I6PD93	Staphylococcus_phage	1.7e-81	100.0
WP_000840496.1\|1101420_1102071_+	ERF family protein	A0A0F6N3I5	Staphylococcus_phage	1.1e-119	100.0
WP_001099010.1\|1102067_1102511_+	single-stranded DNA-binding protein	A0A2I6PD99	Staphylococcus_phage	3.2e-73	95.9
WP_111759411.1\|1102522_1103218_+	hypothetical protein	A0A2I6PDU6	Staphylococcus_phage	4.1e-128	98.6
WP_000504976.1\|1103189_1103990_+	phage replisome organizer N-terminal domain-containing protein	Q8SDW2	Staphylococcus_phage	8.7e-106	98.5
WP_001132238.1\|1103989_1104346_+	hypothetical protein	M9NS37	Staphylococcus_phage	6.9e-63	98.3
WP_001106168.1\|1104342_1105584_+	AAA family ATPase	C8CGZ3	Staphylococcus_phage	2.6e-229	100.0
WP_001095146.1\|1105580_1105796_+	hypothetical protein	B7T0B0	Staphylococcus_virus	1.2e-33	95.8
WP_001123688.1\|1105798_1106020_+	DUF3269 family protein	Q9G021	Staphylococcus_phage	1.3e-35	100.0
WP_000401950.1\|1106029_1106437_+	RusA family crossover junction endodeoxyribonuclease	D2JGK8	Staphylococcus_phage	1.7e-73	100.0
WP_001187264.1\|1106436_1106622_+	DUF3113 family protein	D2JGK9	Staphylococcus_phage	7.0e-27	100.0
WP_000117792.1\|1106622_1106982_+	hypothetical protein	D2JGL0	Staphylococcus_phage	4.5e-62	100.0
WP_000022735.1\|1106981_1107236_+	DUF3310 domain-containing protein	D2JGL1	Staphylococcus_phage	1.3e-42	100.0
WP_012068339.1\|1107235_1107484_+	hypothetical protein	Q4ZBK9	Staphylococcus_phage	1.2e-42	100.0
WP_111157502.1\|1107498_1107900_+	hypothetical protein	Q4ZAC1	Staphylococcus_virus	5.6e-69	99.2
WP_000979209.1\|1107896_1108244_+	hypothetical protein	D2JGL4	Staphylococcus_phage	5.9e-59	100.0
WP_000144711.1\|1108240_1108549_+	hypothetical protein	R4IFL1	Staphylococcus_phage	4.8e-52	100.0
WP_001065023.1\|1108541_1108778_+	DUF1024 family protein	C8CH04	Staphylococcus_phage	1.1e-35	100.0
WP_000185654.1\|1108782_1109325_+	dUTP pyrophosphatase	Q4ZD81	Staphylococcus_virus	1.5e-96	100.0
WP_111759412.1\|1109361_1109568_+	DUF1381 domain-containing protein	A0A2K9VBU7	Staphylococcus_phage	1.7e-21	79.4
WP_000132919.1\|1109564_1109759_+	hypothetical protein	A0A0N7E0T8	Staphylococcus_phage	3.5e-29	100.0
WP_001072795.1\|1109755_1109959_+	hypothetical protein	A0A0N9BAX5	Staphylococcus_phage	5.2e-31	100.0
WP_000608279.1\|1109951_1110188_+	hypothetical protein	A0A0N7E0U3	Staphylococcus_phage	1.3e-36	100.0
WP_000591891.1\|1110180_1110354_+	transcriptional activator RinB	R4IFL3	Staphylococcus_phage	1.1e-21	98.2
WP_000990005.1\|1110354_1110501_+	hypothetical protein	B2ZYX7	Staphylococcus_phage	2.2e-15	100.0
WP_000162700.1\|1110524_1110947_+	RinA family phage transcriptional activator	A0EWS3	Staphylococcus_virus	7.2e-75	100.0
WP_000169946.1\|1111559_1112837_+\|terminase	PBSX family phage terminase large subunit	A0EWS5	Staphylococcus_virus	3.0e-249	100.0
WP_111759413.1\|1112847_1114383_+\|portal	phage portal protein	A0EWS6	Staphylococcus_virus	9.3e-290	99.4
WP_001668926.1\|1114389_1115385_+\|capsid	minor capsid protein	B2ZYY2	Staphylococcus_phage	3.4e-184	100.0
WP_000072202.1\|1115457_1115628_+	hypothetical protein	B2ZYY3	Staphylococcus_phage	6.7e-24	100.0
WP_000392144.1\|1115736_1116357_+	DUF4355 domain-containing protein	B2ZYY4	Staphylococcus_phage	1.6e-75	98.5
WP_000438512.1\|1116370_1117345_+\|capsid	phage major capsid protein	S4SVE6	Staphylococcus_phage	2.2e-183	100.0
WP_001114085.1\|1117366_1117654_+	hypothetical protein	S4V6D9	Staphylococcus_phage	4.7e-46	100.0
WP_000208960.1\|1117662_1117995_+\|head,tail	phage head-tail connector protein	A0A0F6N3F4	Staphylococcus_phage	5.5e-54	100.0
WP_009560319.1\|1117991_1118294_+	hypothetical protein	S4SUQ1	Staphylococcus_phage	8.8e-51	100.0
WP_001017811.1\|1118293_1118641_+	HK97 gp10 family phage protein	I1W643	Staphylococcus_phage	5.3e-60	100.0
WP_000188653.1\|1118652_1119036_+	hypothetical protein	Q8SDU1	Staphylococcus_phage	2.6e-68	100.0
WP_000002583.1\|1119054_1119636_+\|tail	phage major tail protein, TP901-1 family	Q8SDU0	Staphylococcus_phage	4.9e-106	100.0
WP_001100163.1\|1119697_1120063_+	hypothetical protein	Q8SDT9	Staphylococcus_phage	2.8e-59	100.0
WP_000105584.1\|1120092_1120437_+	hypothetical protein	A0A0F6N3F7	Staphylococcus_phage	2.5e-57	100.0
WP_111759414.1\|1120453_1123918_+	hypothetical protein	Q4ZDL9	Staphylococcus_virus	2.5e-266	99.7
WP_111759415.1\|1123930_1124878_+\|tail	phage tail family protein	E0Y3M0	Staphylococcus_virus	4.0e-182	99.0
WP_000156416.1\|1124886_1126788_+\|tail	phage tail protein	B7T0E2	Staphylococcus_virus	0.0e+00	97.3
WP_111759416.1\|1126802_1128713_+	hypothetical protein	Q4ZDD6	Staphylococcus_virus	0.0e+00	96.9
WP_000259596.1\|1128712_1130536_+\|plate	phage baseplate upper protein	S4V7L3	Staphylococcus_phage	0.0e+00	100.0
WP_000705902.1\|1130535_1130913_+	DUF2977 domain-containing protein	S4V993	Staphylococcus_phage	6.9e-61	100.0
WP_015990323.1\|1130916_1131090_+	XkdX family protein	B2ZZ00	Staphylococcus_phage	1.0e-27	100.0
WP_000466784.1\|1131129_1131429_+	DUF2951 domain-containing protein	A0A2I6PER2	Staphylococcus_phage	2.0e-31	100.0
WP_031774825.1\|1131565_1133464_+	glucosaminidase domain-containing protein	Q8SDT1	Staphylococcus_phage	0.0e+00	99.7
WP_061730470.1\|1133476_1134715_+\|plate	BppU family phage baseplate upper protein	Q4ZB96	Staphylococcus_virus	2.9e-209	99.0
WP_000387943.1\|1134719_1135115_+	hypothetical protein	A0A0H4IPB8	Staphylococcus_phage	8.8e-67	97.7
WP_000339146.1\|1135170_1135473_+\|holin	phage holin	A0A2I6PET6	Staphylococcus_phage	7.0e-48	100.0
WP_000930256.1\|1135484_1136939_+	N-acetylmuramoyl-L-alanine amidase	Q4ZBP3	Staphylococcus_phage	4.0e-290	100.0
WP_001788502.1\|1137183_1137336_+	hypothetical protein	A0A0F6N3H2	Staphylococcus_phage	3.1e-20	100.0
WP_000139423.1\|1137406_1137517_+	hypothetical protein	W5R8J7	Staphylococcus_phage	1.7e-12	100.0
WP_001286805.1\|1137518_1137704_+	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.7e-26	100.0
WP_011447034.1\|1138029_1138131_-	hypothetical protein	NA	NA	NA	NA
WP_001005407.1\|1138457_1138619_+	hypothetical protein	NA	NA	NA	NA
WP_000163283.1\|1138749_1139265_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_000830380.1\|1139605_1140415_+	monofunctional peptidoglycan glycosyltransferase SgtB	NA	NA	NA	NA
WP_111759417.1\|1140675_1141494_+	recombination regulator RecX	NA	NA	NA	NA
WP_000435806.1\|1141471_1141786_+	YfhH family protein	NA	NA	NA	NA
WP_000535834.1\|1141800_1143318_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_000886468.1\|1143326_1144163_+	membrane protein	NA	NA	NA	NA
WP_000379098.1\|1144423_1145401_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000284752.1\|1145552_1146590_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000251253.1\|1146891_1147434_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_000597238.1\|1147724_1149461_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4
WP_001791878.1\|1149469_1149562_+	hypothetical protein	NA	NA	NA	NA
WP_001236371.1\|1149651_1150746_-	aromatic acid exporter family protein	NA	NA	NA	NA
WP_001011598.1\|1151038_1152328_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_000939521.1\|1152408_1152864_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_000869455.1\|1152869_1153820_+	2-hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_000110011.1\|1153916_1154363_+	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
WP_031784974.1\|1162688_1162802_-	hypothetical protein	NA	NA	NA	NA
WP_001549130.1\|1162777_1164139_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_000063582.1\|1164631_1165693_+	PTS transporter subunit IIC	NA	NA	NA	NA
WP_000649907.1\|1165950_1167408_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_000590809.1\|1167400_1168123_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	42.7
WP_000379978.1\|1168273_1169401_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_000181398.1\|1169405_1169876_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_001251224.1\|1170034_1170634_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA
WP_000031108.1\|1170658_1170811_+	hypothetical protein	NA	NA	NA	NA
WP_000195429.1\|1171481_1172654_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0

DBSCAN-SWA_5

1199730 : 1266645

Staphylococcus_phage(92.73%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000206350.1\|1199730_1200519_-	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	5.3e-140	95.8
WP_001790220.1\|1200531_1201071_-	hypothetical protein	Q4ZCB9	Staphylococcus_virus	2.0e-61	76.8
WP_000473596.1\|1201870_1202806_+	bi-component leukocidin LukED subunit E	A0A2H4PQI5	Staphylococcus_phage	1.4e-174	100.0
WP_000782464.1\|1202807_1203791_+	bi-component leukocidin LukED subunit D	A0A2H4PQH7	Staphylococcus_phage	2.3e-185	99.1
WP_000416759.1\|1204032_1204176_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA
WP_000416756.1\|1204912_1205056_+	gallidermin/nisin family lantibiotic	A0A2H4PQH4	Staphylococcus_phage	5.3e-14	80.9
WP_001092605.1\|1205120_1208114_+	lantibiotic dehydratase	A0A2H4PQG8	Staphylococcus_phage	0.0e+00	97.3
WP_000566596.1\|1208106_1209351_+	lanthionine synthetase C family protein	A0A2H4PQH9	Staphylococcus_phage	5.1e-238	100.0
WP_000504441.1\|1209366_1209885_+	flavoprotein	A0A2H4PQG9	Staphylococcus_phage	1.0e-94	99.4
WP_000691541.1\|1209894_1211268_+	S8 family serine peptidase	A0A2H4PQH1	Staphylococcus_phage	2.9e-258	100.0
WP_001096791.1\|1211290_1211983_+	lantibiotic protection ABC transporter ATP-binding subunit	A0A2H4PQG7	Staphylococcus_phage	6.2e-124	100.0
WP_000581552.1\|1211979_1212741_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	A0A2H4PQH2	Staphylococcus_phage	4.4e-131	100.0
WP_000586140.1\|1212737_1213436_+	hypothetical protein	A0A2H4PQH0	Staphylococcus_phage	3.8e-113	94.4
WP_015581877.1\|1213909_1214476_-	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	1.2e-98	99.5
WP_111759421.1\|1215439_1216147_+\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	1.7e-129	99.6
WP_001039447.1\|1216271_1216994_+\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	2.4e-131	99.6
WP_001038867.1\|1217051_1217771_+\|protease	serine protease SplC	A0A2H4PQP7	Staphylococcus_phage	1.2e-130	99.2
WP_001038704.1\|1217891_1218611_+\|protease	serine protease SplD	A0A2H4PQP9	Staphylococcus_phage	4.6e-130	99.6
WP_011447030.1\|1218559_1218667_-	hypothetical protein	NA	NA	NA	NA
WP_001038759.1\|1218768_1219485_+\|protease	serine protease SplE	A0A2H4PQN5	Staphylococcus_phage	1.1e-131	100.0
WP_001038688.1\|1219635_1220355_+\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.1e-131	100.0
WP_001791797.1\|1220419_1220554_+	hypothetical protein	NA	NA	NA	NA
WP_000028659.1\|1220717_1222274_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.3e-288	99.4
WP_000072576.1\|1222266_1223466_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	5.5e-229	99.7
WP_142746123.1\|1224315_1224627_+	SMEK domain-containing protein	NA	NA	NA	NA
WP_000195429.1\|1224676_1225849_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_001037045.1\|1230280_1230658_+	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_001791893.1\|1231005_1231107_-	hypothetical protein	NA	NA	NA	NA
WP_001801861.1\|1231229_1231325_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA
WP_001549059.1\|1231527_1231671_+\|transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	6.4e-20	100.0
WP_000070811.1\|1232274_1232658_+	hypothetical protein	NA	NA	NA	NA
WP_000375476.1\|1232668_1232845_+	hypothetical protein	NA	NA	NA	NA
WP_000809857.1\|1232846_1233032_+	hypothetical protein	NA	NA	NA	NA
WP_000494956.1\|1233145_1233787_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	2.6e-76	93.2
WP_000414205.1\|1234004_1234556_-	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	1.0e-20	94.1
WP_000627551.1\|1234653_1234998_-	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	6.3e-53	92.0
WP_000669046.1\|1235038_1235665_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	7.1e-79	82.7
WP_000070653.1\|1235740_1236736_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	7.1e-73	96.4
WP_001795535.1\|1236816_1237467_-	excalibur calcium-binding domain-containing protein	A0A2H4PQM8	Staphylococcus_phage	2.7e-44	88.4
WP_011443643.1\|1237769_1238225_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	3.0e-79	98.6
WP_000348360.1\|1238383_1239862_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.0e-281	97.0
WP_000778523.1\|1239866_1240868_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	4.8e-186	97.6
WP_000718107.1\|1240864_1241122_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000672014.1\|1241187_1241661_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	4.7e-83	98.1
WP_002868962.1\|1241665_1242412_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	7.1e-142	98.4
WP_000093392.1\|1242786_1243272_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4
WP_000109906.1\|1243407_1245000_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
WP_111759423.1\|1245370_1246564_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.4e-216	99.0
WP_000366154.1\|1246688_1247597_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.2e-136	98.7
WP_000453320.1\|1247808_1248642_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.6e-156	98.6
WP_000623471.1\|1250724_1251078_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	1.0e-21	99.1
WP_001200542.1\|1251074_1251440_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
WP_000091445.1\|1251695_1251998_-	hypothetical protein	NA	NA	NA	NA
WP_001096494.1\|1252257_1252971_+	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_001168904.1\|1253410_1254046_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001030465.1\|1254341_1254785_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	3.0e-55	85.0
WP_001153742.1\|1254771_1255215_-	competence protein ComK	NA	NA	NA	NA
WP_000671052.1\|1255327_1255798_-	RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
WP_000384171.1\|1255996_1256221_+	hypothetical protein	NA	NA	NA	NA
WP_001032833.1\|1256496_1257351_+	glucosaminidase domain-containing protein	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000163235.1\|1257645_1258041_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	6.3e-73	100.0
WP_000989121.1\|1258058_1259351_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
WP_000221179.1\|1259350_1259665_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	2.0e-53	100.0
WP_001261677.1\|1260187_1261690_+	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	2.3e-30	100.0
WP_000077344.1\|1262170_1263214_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.3e-197	99.4
WP_111759424.1\|1263220_1263853_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-111	99.0
WP_001159022.1\|1263863_1265045_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.6e-227	99.7
WP_001008551.1\|1265057_1265522_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
WP_001196354.1\|1265643_1266645_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7

DBSCAN-SWA_6

1384705 : 1432291

Streptococcus_phage(47.37%)

tRNA,protease,transposase,integrase

attL 1396507:1396523|attR 1429341:1429357

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000472302.1\|1384705_1385968_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.0e-140	62.0
WP_000867697.1\|1386121_1386712_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_000545451.1\|1386928_1388275_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_001157329.1\|1388296_1389112_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_001230228.1\|1389153_1390080_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_000805950.1\|1390101_1390770_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_000667126.1\|1390772_1391747_+	porphobilinogen synthase	NA	NA	NA	NA
WP_001270868.1\|1391794_1393081_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_001788970.1\|1393141_1393243_+	hypothetical protein	NA	NA	NA	NA
WP_001240848.1\|1393276_1394350_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_001001228.1\|1394572_1395133_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_000425353.1\|1395535_1398166_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.7
1396507:1396523	attL	NA	NA	NA	NA
WP_001108346.1\|1398178_1399450_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_000261115.1\|1399719_1400427_+	prepilin peptidase	NA	NA	NA	NA
WP_172449597.1\|1400423_1401131_+	DNA repair protein RadC	NA	NA	NA	NA
WP_111759429.1\|1401288_1401537_+	hypothetical protein	NA	NA	NA	NA
WP_078149699.1\|1401559_1401952_-	YolD-like family protein	U3PG23	Staphylococcus_phage	5.1e-35	54.3
WP_009385726.1\|1402029_1402755_+	hypothetical protein	NA	NA	NA	NA
WP_009385725.1\|1402771_1403467_+	hypothetical protein	NA	NA	NA	NA
WP_111759430.1\|1403485_1404826_+	hypothetical protein	NA	NA	NA	NA
WP_111759431.1\|1405175_1405724_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_111759432.1\|1405739_1406342_+	short chain dehydrogenase	NA	NA	NA	NA
WP_111759433.1\|1406367_1407549_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_111759434.1\|1407545_1409270_+	FAD-dependent oxidoreductase	A0A0M3SGX2	Mollivirus	1.4e-15	23.3
WP_111759435.1\|1409446_1409902_-	hypothetical protein	NA	NA	NA	NA
WP_111759436.1\|1410160_1410262_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_111759437.1\|1410384_1411086_+	hypothetical protein	NA	NA	NA	NA
WP_111759438.1\|1411126_1411366_+	hypothetical protein	NA	NA	NA	NA
WP_000164963.1\|1411597_1412413_-	AAA family ATPase	NA	NA	NA	NA
WP_000790705.1\|1412405_1413848_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000690628.1\|1413819_1414413_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.1e-41	51.1
WP_001106019.1\|1414673_1415348_-\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	8.1e-129	100.0
WP_000282655.1\|1415461_1416418_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.1e-190	100.0
WP_000175735.1\|1416459_1416945_+	trimethoprim-resistant dihydrofolate reductase DfrC	A0A0N9S8H6	Staphylococcus_phage	1.1e-90	100.0
WP_001106022.1\|1417408_1418083_-\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.2e-129	100.0
WP_001255866.1\|1418344_1419253_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	E4ZFP8	Streptococcus_phage	2.8e-177	100.0
WP_111759439.1\|1419249_1419780_+	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	2.5e-85	94.4
WP_001096887.1\|1419872_1420667_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_001079938.1\|1420942_1421515_+	HTH domain-containing protein	A0A1B0RXM1	Streptococcus_phage	5.5e-102	99.5
WP_072387101.1\|1421487_1421895_+	WYL domain-containing protein	A0A1B0RXM3	Streptococcus_phage	1.1e-59	98.3
WP_000802831.1\|1422005_1422665_+	RibD family protein	A0A1B0RXM8	Streptococcus_phage	3.1e-125	100.0
WP_000284571.1\|1423385_1424990_-\|transposase	IS1182-like element IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.1e-128	44.4
WP_111759440.1\|1425222_1426122_+	ParA family protein	A0A1X9I765	Streptococcus_phage	2.2e-150	96.5
WP_000527318.1\|1426220_1426430_+	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.4e-31	98.6
WP_002326825.1\|1426447_1426720_+	antitoxin	A0A1X9I6E5	Streptococcus_phage	5.4e-07	96.7
WP_001092058.1\|1427382_1428045_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_111759441.1\|1428493_1428778_+	hypothetical protein	NA	NA	NA	NA
WP_000025835.1\|1428894_1429092_-	hypothetical protein	NA	NA	NA	NA
WP_001236735.1\|1429251_1429725_+	DUF4930 family protein	NA	NA	NA	NA
1429341:1429357	attR	NA	NA	NA	NA
WP_000840602.1\|1429798_1429918_+	hypothetical protein	NA	NA	NA	NA
WP_000911041.1\|1430117_1430960_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_001259925.1\|1430959_1431490_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_000457386.1\|1431656_1431965_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_000633692.1\|1431970_1432291_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA

DBSCAN-SWA_7

1435349 : 1444392

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001005767.1\|1435349_1436354_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001019172.1\|1436355_1437381_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001112045.1\|1437403_1438543_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
WP_001160682.1\|1438561_1438822_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_000749795.1\|1439096_1441376_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_000594993.1\|1441578_1443852_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.2e-62	28.8
WP_000364542.1\|1443873_1444392_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5

DBSCAN-SWA_8

1812784 : 1818774

Staphylococcus_phage(83.33%)

transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_170943459.1\|1812784_1813273_-\|capsid	minor capsid protein	A0A2H4IYR8	uncultured_Caudovirales_phage	2.5e-23	76.7
WP_000956747.1\|1813414_1813666_-	hypothetical protein	NA	NA	NA	NA
WP_000477492.1\|1813794_1813899_-	hypothetical protein	NA	NA	NA	NA
WP_000006110.1\|1814410_1814596_-	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.4e-19	78.7
WP_001788716.1\|1815023_1815134_-	hypothetical protein	NA	NA	NA	NA
WP_001002340.1\|1815834_1816041_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	1.3e-13	59.7
WP_000195429.1\|1816300_1817473_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_001789892.1\|1817663_1817888_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	4.3e-18	71.0
WP_001789891.1\|1818576_1818774_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	1.7e-10	48.4

DBSCAN-SWA_9

1874153 : 1942444

Staphylococcus_phage(26.32%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000814103.1\|1874153_1875857_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000121116.1\|1875876_1877163_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_000868413.1\|1877374_1878157_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_000473705.1\|1878163_1878934_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	7.3e-25	41.5
WP_001280006.1\|1879306_1879861_-	ribosome recycling factor	NA	NA	NA	NA
WP_000057330.1\|1879879_1880602_-	UMP kinase	NA	NA	NA	NA
WP_000201387.1\|1880738_1881620_-	elongation factor Ts	NA	NA	NA	NA
WP_001789890.1\|1881654_1881768_-	hypothetical protein	NA	NA	NA	NA
WP_000268484.1\|1881801_1882569_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_001790530.1\|1882767_1882860_-	hypothetical protein	NA	NA	NA	NA
WP_000055337.1\|1882910_1883684_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_000379054.1\|1883708_1885112_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	4.9e-27	25.6
WP_000072681.1\|1885177_1885723_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001015597.1\|1885719_1886616_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	3.6e-31	31.5
WP_000195254.1\|1887032_1888340_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_001548566.1\|1888495_1890571_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-105	39.2
WP_061642004.1\|1890744_1891617_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_000672867.1\|1891789_1893034_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA
WP_001041662.1\|1893061_1894180_-	LysM peptidoglycan-binding domain-containing protein	A0A1W6JQB6	Staphylococcus_phage	9.5e-50	61.1
WP_000110253.1\|1894406_1895315_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.0e-17	33.2
WP_001020801.1\|1895336_1896503_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_111759451.1\|1896611_1897379_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	4.3e-25	44.1
WP_000236722.1\|1897362_1898247_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_000915229.1\|1898647_1901254_+	lipoteichoic acid-specific glycosyltransferase YfhO	NA	NA	NA	NA
WP_000181404.1\|1901497_1901848_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000687328.1\|1901950_1902688_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_001261987.1\|1902687_1903191_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000268754.1\|1903378_1903654_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000863479.1\|1904088_1905456_-	signal recognition particle protein	NA	NA	NA	NA
WP_000531320.1\|1905481_1905814_-	putative DNA-binding protein	NA	NA	NA	NA
WP_000007683.1\|1905800_1907051_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_000262704.1\|1907050_1910617_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_000043237.1\|1910763_1911495_-	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8
WP_000426914.1\|1911610_1911844_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000167269.1\|1912086_1912821_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3
WP_000047348.1\|1912813_1913740_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_000239744.1\|1913732_1914719_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_001548538.1\|1914723_1915296_-	transcription factor FapR	NA	NA	NA	NA
WP_001151499.1\|1915498_1917559_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_000623903.1\|1917748_1919395_-	DAK2 domain-containing protein	NA	NA	NA	NA
WP_000171418.1\|1919409_1919784_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_000195429.1\|1920170_1921343_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000517908.1\|1921558_1921747_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_000547905.1\|1922127_1922769_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_000164332.1\|1922775_1923420_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_000847933.1\|1923420_1924296_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_000579564.1\|1924523_1926518_-	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8
WP_000888494.1\|1926514_1927258_-	protein-serine/threonine phosphatase Stp1	NA	NA	NA	NA
WP_000626897.1\|1927264_1928359_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_000572235.1\|1928361_1929669_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_000161299.1\|1929665_1930601_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-10	28.9
WP_000985293.1\|1930593_1931082_-	peptide deformylase	NA	NA	NA	NA
WP_001198024.1\|1931380_1931584_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_000751704.1\|1931746_1932700_-	hypothetical protein	NA	NA	NA	NA
WP_061642007.1\|1933205_1935614_-	primosomal protein N'	NA	NA	NA	NA
WP_000722165.1\|1935613_1936813_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.2e-42	32.9
WP_000195429.1\|1937163_1938336_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_001028144.1\|1938465_1939905_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
WP_000393259.1\|1939905_1940298_-	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
WP_000195429.1\|1940354_1941527_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_111759452.1\|1941626_1941821_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000368227.1\|1941820_1942444_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	3.6e-22	34.7

DBSCAN-SWA_10

2014055 : 2071392

Staphylococcus_phage(72.86%)

tRNA,plate,terminase,capsid,holin,head,integrase,tail,portal

attL 2063852:2063870|attR 2075549:2075567

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000908982.1\|2014055_2016458_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000003559.1\|2016457_2017516_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5
WP_000435374.1\|2017896_2018637_-	RNA methyltransferase	NA	NA	NA	NA
WP_001788617.1\|2018876_2018984_-	hypothetical protein	NA	NA	NA	NA
WP_000670950.1\|2019020_2019344_-	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA
WP_001242429.1\|2019362_2020097_-	class B sortase	NA	NA	NA	NA
WP_001548422.1\|2020158_2021127_-	iron ABC transporter permease	NA	NA	NA	NA
WP_111759455.1\|2021136_2022015_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA
WP_001246698.1\|2022011_2023088_-	hypothetical protein	NA	NA	NA	NA
WP_000789821.1\|2023087_2023771_-	heme uptake protein IsdC	NA	NA	NA	NA
WP_000160859.1\|2023979_2025032_+	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA
WP_001041586.1\|2025234_2027172_+	heme uptake protein IsdB	NA	NA	NA	NA
WP_001251276.1\|2027355_2027739_-	hypothetical protein	A0A2H4PQP6	Staphylococcus_phage	6.1e-65	99.2
WP_000344116.1\|2027725_2028037_-	DUF3467 domain-containing protein	A0A2H4PQQ9	Staphylococcus_phage	4.1e-51	100.0
WP_001148137.1\|2028703_2030149_-	SH3 domain-containing protein	Q4ZAM7	Staphylococcus_virus	1.8e-295	100.0
WP_000354132.1\|2030129_2030567_-\|holin	phage holin	A0A2H4PQP0	Staphylococcus_phage	4.1e-73	100.0
WP_015978410.1\|2030622_2031018_-	hypothetical protein	A0A2H4PQP8	Staphylococcus_phage	2.1e-68	100.0
WP_000276656.1\|2031023_2032196_-\|plate	BppU family phage baseplate upper protein	A0A2I6PCW8	Staphylococcus_phage	2.2e-198	100.0
WP_111759456.1\|2032208_2034107_-	glucosaminidase domain-containing protein	B2ZZ02	Staphylococcus_phage	0.0e+00	97.3
WP_111759457.1\|2034243_2034543_-	DUF2951 domain-containing protein	A0EWU6	Staphylococcus_virus	5.1e-35	80.8
WP_111759496.1\|2034583_2034757_-	XkdX family protein	Q8LTH6	Staphylococcus_phage	5.0e-27	98.2
WP_000705893.1\|2034760_2035138_-	DUF2977 domain-containing protein	Q8LTH7	Staphylococcus_phage	7.3e-55	100.0
WP_031783642.1\|2035137_2036961_-\|plate	phage baseplate upper protein	A0A0F6N3G2	Staphylococcus_phage	0.0e+00	99.8
WP_111759458.1\|2036960_2038871_-	hypothetical protein	Q4ZDD6	Staphylococcus_virus	0.0e+00	99.2
WP_000152714.1\|2038885_2040787_-\|tail	phage tail protein	I1W634	Staphylococcus_phage	0.0e+00	99.8
WP_111759459.1\|2040795_2041743_-\|tail	phage tail family protein	Q8SDT6	Staphylococcus_phage	1.4e-182	99.4
WP_111759414.1\|2041755_2045220_-	hypothetical protein	Q4ZDL9	Staphylococcus_virus	2.5e-266	99.7
WP_000105584.1\|2045236_2045581_-	hypothetical protein	A0A0F6N3F7	Staphylococcus_phage	2.5e-57	100.0
WP_001100163.1\|2045610_2045976_-	hypothetical protein	Q8SDT9	Staphylococcus_phage	2.8e-59	100.0
WP_000002583.1\|2046037_2046619_-\|tail	phage major tail protein, TP901-1 family	Q8SDU0	Staphylococcus_phage	4.9e-106	100.0
WP_000188653.1\|2046637_2047021_-	hypothetical protein	Q8SDU1	Staphylococcus_phage	2.6e-68	100.0
WP_001017811.1\|2047032_2047380_-	HK97 gp10 family phage protein	I1W643	Staphylococcus_phage	5.3e-60	100.0
WP_009560319.1\|2047379_2047682_-	hypothetical protein	S4SUQ1	Staphylococcus_phage	8.8e-51	100.0
WP_000208960.1\|2047678_2048011_-\|head,tail	phage head-tail connector protein	A0A0F6N3F4	Staphylococcus_phage	5.5e-54	100.0
WP_001114085.1\|2048019_2048307_-	hypothetical protein	S4V6D9	Staphylococcus_phage	4.7e-46	100.0
WP_000438512.1\|2048328_2049303_-\|capsid	phage major capsid protein	S4SVE6	Staphylococcus_phage	2.2e-183	100.0
WP_111759460.1\|2049316_2049937_-	DUF4355 domain-containing protein	B2ZYY4	Staphylococcus_phage	1.8e-74	97.1
WP_000072202.1\|2050045_2050216_-	hypothetical protein	B2ZYY3	Staphylococcus_phage	6.7e-24	100.0
WP_111759413.1\|2051289_2052825_-\|portal	phage portal protein	A0EWS6	Staphylococcus_virus	9.3e-290	99.4
WP_000169946.1\|2052835_2054113_-\|terminase	PBSX family phage terminase large subunit	A0EWS5	Staphylococcus_virus	3.0e-249	100.0
WP_001003272.1\|2054099_2054540_-\|terminase	terminase small subunit	Q8SDV0	Staphylococcus_phage	2.8e-74	100.0
WP_000162700.1\|2054726_2055149_-	RinA family phage transcriptional activator	A0EWS3	Staphylococcus_virus	7.2e-75	100.0
WP_000990005.1\|2055172_2055319_-	hypothetical protein	B2ZYX7	Staphylococcus_phage	2.2e-15	100.0
WP_000591891.1\|2055319_2055493_-	transcriptional activator RinB	R4IFL3	Staphylococcus_phage	1.1e-21	98.2
WP_000608279.1\|2055485_2055722_-	hypothetical protein	A0A0N7E0U3	Staphylococcus_phage	1.3e-36	100.0
WP_001072795.1\|2055714_2055918_-	hypothetical protein	A0A0N9BAX5	Staphylococcus_phage	5.2e-31	100.0
WP_000132919.1\|2055914_2056109_-	hypothetical protein	A0A0N7E0T8	Staphylococcus_phage	3.5e-29	100.0
WP_111759412.1\|2056105_2056312_-	DUF1381 domain-containing protein	A0A2K9VBU7	Staphylococcus_phage	1.7e-21	79.4
WP_000185654.1\|2056348_2056891_-	dUTP pyrophosphatase	Q4ZD81	Staphylococcus_virus	1.5e-96	100.0
WP_001065023.1\|2056895_2057132_-	DUF1024 family protein	C8CH04	Staphylococcus_phage	1.1e-35	100.0
WP_000144711.1\|2057124_2057433_-	hypothetical protein	R4IFL1	Staphylococcus_phage	4.8e-52	100.0
WP_000979209.1\|2057429_2057777_-	hypothetical protein	D2JGL4	Staphylococcus_phage	5.9e-59	100.0
WP_015977708.1\|2057773_2058175_-	hypothetical protein	D2JGL3	Staphylococcus_phage	9.2e-72	100.0
WP_012068339.1\|2058189_2058438_-	hypothetical protein	Q4ZBK9	Staphylococcus_phage	1.2e-42	100.0
WP_000022735.1\|2058437_2058692_-	DUF3310 domain-containing protein	D2JGL1	Staphylococcus_phage	1.3e-42	100.0
WP_000117792.1\|2058691_2059051_-	hypothetical protein	D2JGL0	Staphylococcus_phage	4.5e-62	100.0
WP_001187264.1\|2059051_2059237_-	DUF3113 family protein	D2JGK9	Staphylococcus_phage	7.0e-27	100.0
WP_000401950.1\|2059236_2059644_-	RusA family crossover junction endodeoxyribonuclease	D2JGK8	Staphylococcus_phage	1.7e-73	100.0
WP_001123684.1\|2059653_2059875_-	DUF3269 family protein	Q4ZBL4	Staphylococcus_phage	1.7e-35	100.0
WP_000256597.1\|2059887_2060046_-	hypothetical protein	Q4ZBL5	Staphylococcus_phage	3.4e-22	100.0
WP_000803062.1\|2060039_2060819_-	ATP-binding protein	G4KNP1	Staphylococcus_phage	3.8e-146	100.0
WP_000190223.1\|2060828_2061599_-	conserved phage C-terminal domain-containing protein	A0A0N6WMQ8	Staphylococcus_phage	1.8e-116	100.0
WP_000371250.1\|2061663_2062521_+	DUF4393 domain-containing protein	Q4ZBL8	Staphylococcus_phage	9.5e-159	100.0
WP_031928974.1\|2062626_2063301_-	phi PV83 orf 19-like protein	A1KX69	Staphylococcus_virus	1.5e-130	99.6
WP_001099010.1\|2063312_2063756_-	single-stranded DNA-binding protein	A0A2I6PD99	Staphylococcus_phage	3.2e-73	95.9
WP_000840496.1\|2063752_2064403_-	ERF family protein	A0A0F6N3I5	Staphylococcus_phage	1.1e-119	100.0
2063852:2063870	attL	NA	NA	NA	NA
WP_000999048.1\|2064403_2064940_-	host-nuclease inhibitor Gam family protein	A0A2I6PD93	Staphylococcus_phage	1.7e-81	100.0
WP_000291089.1\|2064952_2065213_-	DUF1108 family protein	Q4ZBM7	Staphylococcus_phage	1.2e-43	100.0
WP_001619936.1\|2065304_2065466_-	DUF1270 family protein	Q4ZDA3	Staphylococcus_virus	5.0e-21	100.0
WP_000594789.1\|2065458_2065680_-	hypothetical protein	B2ZYU8	Staphylococcus_phage	8.7e-32	100.0
WP_000395455.1\|2065750_2065981_+	hypothetical protein	C8CGY3	Staphylococcus_phage	2.3e-35	100.0
WP_000033736.1\|2066187_2066397_+	hypothetical protein	Q4ZDA8	Staphylococcus_virus	1.6e-35	100.0
WP_000398751.1\|2066385_2066556_-	hypothetical protein	Q4ZDA9	Staphylococcus_virus	6.1e-25	100.0
WP_000282677.1\|2066626_2067394_-	ParB N-terminal domain-containing protein	Q4ZDB0	Staphylococcus_virus	2.3e-140	100.0
WP_000904049.1\|2067386_2068268_-	ParB N-terminal domain-containing protein	Q4ZDB2	Staphylococcus_virus	6.8e-152	100.0
WP_001113664.1\|2068307_2068517_-	helix-turn-helix transcriptional regulator	Q4ZDB3	Staphylococcus_virus	4.8e-32	100.0
WP_000455972.1\|2068679_2069006_+	helix-turn-helix transcriptional regulator	A0A059T5A2	Staphylococcus_phage	7.0e-54	100.0
WP_111759461.1\|2069027_2069486_+	toxin	A0A059T660	Staphylococcus_phage	7.8e-83	98.0
WP_015967225.1\|2069501_2069927_+	hypothetical protein	Q9G042	Staphylococcus_virus	6.1e-74	100.0
WP_172440508.1\|2070060_2070288_+	hypothetical protein	Q9G043	Staphylococcus_virus	3.0e-11	100.0
WP_015978393.1\|2070345_2071392_+\|integrase	site-specific integrase	Q4ZAM3	Staphylococcus_virus	5.5e-201	100.0
2075549:2075567	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2110515 : 2203371

119

Staphylococcus_phage(75.0%)

terminase,capsid,transposase,holin,head,protease,integrase,tail,portal

attL 2149715:2149774|attR 2202147:2203473

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284431.1\|2110515_2111985_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.5e-108	45.1
WP_000897635.1\|2112168_2113245_+	nitric oxide synthase oxygenase	NA	NA	NA	NA
WP_001291561.1\|2113955_2115173_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_000814511.1\|2115254_2115458_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_000857133.1\|2115918_2116149_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_111759463.1\|2116145_2116568_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	1.8e-70	98.6
WP_001227347.1\|2117072_2117426_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000336323.1\|2117485_2117653_-	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_000691749.1\|2117771_2119691_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.4
WP_001814923.1\|2119706_2119823_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_001224318.1\|2120067_2121000_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
WP_000769868.1\|2120996_2121998_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_000804748.1\|2121994_2124172_-	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_085407381.1\|2124174_2126622_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	99.9
WP_000506270.1\|2126605_2127112_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000342539.1\|2127086_2127584_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_001009056.1\|2127700_2127922_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000398284.1\|2127964_2129170_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_000879507.1\|2129192_2129345_-	hypothetical protein	NA	NA	NA	NA
WP_000813488.1\|2129347_2130733_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000985015.1\|2130761_2131148_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000420682.1\|2131163_2131478_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_001802312.1\|2132168_2132276_+	hypothetical protein	NA	NA	NA	NA
WP_000323161.1\|2132286_2133849_-	SLC13 family permease	NA	NA	NA	NA
WP_000275730.1\|2134053_2135151_-	pectate lyase	U5PWM6	Bacillus_phage	1.9e-47	34.6
WP_000149686.1\|2135522_2136083_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_001140871.1\|2136135_2137065_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_001790680.1\|2137259_2137433_-	hypothetical protein	NA	NA	NA	NA
WP_001021214.1\|2137484_2138864_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_111759464.1\|2138983_2140012_-	lactonase family protein	NA	NA	NA	NA
WP_000205106.1\|2140281_2140683_+	YolD-like family protein	U3PG23	Staphylococcus_phage	6.0e-23	42.9
WP_000267034.1\|2141255_2141429_-	hypothetical protein	NA	NA	NA	NA
WP_001188077.1\|2141879_2142920_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_000713072.1\|2142976_2143819_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_001033971.1\|2143815_2144373_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_000966288.1\|2144432_2144957_-	membrane protein	NA	NA	NA	NA
WP_000182842.1\|2145077_2145641_+	thioredoxin family protein	NA	NA	NA	NA
WP_111759465.1\|2145706_2146447_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
WP_000763048.1\|2146446_2147319_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_000645727.1\|2147315_2147996_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000991302.1\|2147996_2148893_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000691584.1\|2148889_2149270_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000681968.1\|2149533_2149710_-	hypothetical protein	NA	NA	NA	NA
2149715:2149774	attL	NA	NA	NA	NA
WP_000195429.1\|2149766_2150939_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000990056.1\|2151284_2151383_-	hypothetical protein	NA	NA	NA	NA
WP_001068542.1\|2151582_2152869_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_001549158.1\|2153493_2155248_-	MAP domain-containing protein	NA	NA	NA	NA
WP_000669789.1\|2156205_2156385_+	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
WP_001791826.1\|2156695_2156956_+	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000702262.1\|2157008_2157359_-	complement inhibitor SCIN-A	A7TWS0	Staphylococcus_phage	7.5e-54	100.0
WP_000727652.1\|2158039_2158489_+	chemotaxis-inhibiting protein CHIPS	A0A1P8L6A8	Staphylococcus_phage	4.8e-77	98.7
WP_000919350.1\|2159568_2160060_-	staphylokinase	A0A1X9H028	Staphylococcus_phage	9.5e-87	100.0
WP_000861038.1\|2160250_2161006_-	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000611512.1\|2161017_2161272_-\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_001791821.1\|2161323_2161431_+	hypothetical protein	NA	NA	NA	NA
WP_011447039.1\|2161483_2161660_-\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_000539688.1\|2161809_2162106_-	DUF2951 domain-containing protein	D2JLG2	Staphylococcus_phage	2.9e-46	100.0
WP_001040261.1\|2162163_2162451_-	hypothetical protein	D2JLG1	Staphylococcus_phage	1.3e-43	100.0
WP_001153681.1\|2162497_2162650_-	hypothetical protein	D2JLG0	Staphylococcus_phage	5.2e-20	100.0
WP_000582158.1\|2162639_2166425_-	hypothetical protein	A0A1X9H0H3	Staphylococcus_phage	0.0e+00	98.4
WP_000567408.1\|2166440_2167925_-\|tail	phage tail family protein	A0A2I6PDJ0	Staphylococcus_phage	1.2e-297	100.0
WP_111759466.1\|2167921_2172451_-\|tail	phage tail tape measure protein	C8CH30	Staphylococcus_phage	0.0e+00	96.8
WP_001549167.1\|2172507_2172645_-	hypothetical protein	A0A2I6PDX7	Staphylococcus_phage	3.4e-18	100.0
WP_001096355.1\|2172695_2173046_-	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_111759497.1\|2173095_2173401_-	Ig-like domain-containing protein	A0A075LYE8	Staphylococcus_phage	4.3e-29	91.9
WP_111759467.1\|2173361_2174003_-\|tail	phage tail protein	C8CH27	Staphylococcus_phage	6.1e-118	98.6
WP_000565498.1\|2174003_2174411_-	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000114341.1\|2174407_2174812_-	HK97 gp10 family phage protein	A0A1W6JPJ1	Staphylococcus_phage	2.5e-69	100.0
WP_000755150.1\|2174808_2175171_-\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000150936.1\|2175154_2175439_-\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000238240.1\|2175428_2175713_-	hypothetical protein	A0A1W6JPL8	Staphylococcus_phage	2.3e-45	100.0
WP_000154558.1\|2175732_2176878_-\|capsid	phage major capsid protein	C8CH21	Staphylococcus_phage	2.8e-214	99.7
WP_000642728.1\|2176901_2177639_-\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	1.8e-129	100.0
WP_000025266.1\|2177622_2178810_-\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	3.0e-219	99.7
WP_111759468.1\|2178825_2180487_-\|terminase	terminase large subunit	Q8LTH3	Staphylococcus_phage	0.0e+00	99.6
WP_000402904.1\|2180483_2180828_-	hypothetical protein	G4KNP9	Staphylococcus_phage	9.4e-57	100.0
WP_000988332.1\|2180958_2181258_-	HNH endonuclease	A0A2I6PDH9	Staphylococcus_phage	3.5e-52	100.0
WP_000590126.1\|2181489_2181906_-	hypothetical protein	A0A1X9H0U8	Staphylococcus_phage	2.9e-76	100.0
WP_000265039.1\|2181933_2182134_-	DUF1514 family protein	R9QT57	Staphylococcus_phage	1.4e-28	98.5
WP_000595265.1\|2182133_2182283_-	transcriptional activator RinB	A0A1W6JPZ2	Staphylococcus_phage	4.8e-18	100.0
WP_000195820.1\|2182279_2182486_-	DUF1381 domain-containing protein	A0A1X9H0C2	Staphylococcus_phage	1.3e-21	100.0
WP_001066444.1\|2182522_2183059_-	dUTP diphosphatase	A0A1X9H0S5	Staphylococcus_phage	1.4e-96	100.0
WP_015581851.1\|2183051_2183540_-	DUF1024 family protein	A0A0H3U313	Staphylococcus_phage	5.8e-12	54.3
WP_000197968.1\|2183532_2183943_-	hypothetical protein	A0A1X9H0B8	Staphylococcus_phage	2.3e-70	100.0
WP_111759469.1\|2183939_2184449_-	hypothetical protein	A0A1X9H0D4	Staphylococcus_phage	2.0e-92	99.4
WP_000982711.1\|2184445_2184895_-	hypothetical protein	A0A2I6PDH2	Staphylococcus_phage	2.1e-80	99.3
WP_111759470.1\|2184959_2185208_-	hypothetical protein	Q4ZBK9	Staphylococcus_phage	2.3e-41	98.8
WP_000022735.1\|2185207_2185462_-	DUF3310 domain-containing protein	D2JGL1	Staphylococcus_phage	1.3e-42	100.0
WP_000117792.1\|2185461_2185821_-	hypothetical protein	D2JGL0	Staphylococcus_phage	4.5e-62	100.0
WP_111759471.1\|2185821_2186007_-	DUF3113 family protein	D2JGK9	Staphylococcus_phage	1.6e-26	98.4
WP_111759472.1\|2186011_2186416_-	DUF1064 domain-containing protein	G4KNP2	Staphylococcus_phage	2.1e-68	99.3
WP_001123673.1\|2186425_2186647_-	DUF3269 family protein	A7TWN4	Staphylococcus_phage	1.3e-35	100.0
WP_000628837.1\|2186659_2186818_-	hypothetical protein	A0A0H3U301	Staphylococcus_phage	3.4e-22	100.0
WP_000443353.1\|2186814_2187600_-	ATP-binding protein	A0A0H4J332	Staphylococcus_phage	1.9e-145	100.0
WP_000132051.1\|2187612_2188344_-	helix-turn-helix domain-containing protein	A0A1J0MGB2	Staphylococcus_phage	9.8e-80	78.8
WP_000429731.1\|2188405_2188816_+	hypothetical protein	Q4ZDQ7	Staphylococcus_virus	1.5e-72	100.0
WP_172449599.1\|2188860_2189001_-	hypothetical protein	Q4ZDQ8	Staphylococcus_virus	3.7e-12	97.4
WP_111759473.1\|2189002_2189671_-	hypothetical protein	A1KX69	Staphylococcus_virus	1.4e-128	98.6
WP_001099010.1\|2189682_2190126_-	single-stranded DNA-binding protein	A0A2I6PD99	Staphylococcus_phage	3.2e-73	95.9
WP_000840496.1\|2190122_2190773_-	ERF family protein	A0A0F6N3I5	Staphylococcus_phage	1.1e-119	100.0
WP_000999048.1\|2190773_2191310_-	host-nuclease inhibitor Gam family protein	A0A2I6PD93	Staphylococcus_phage	1.7e-81	100.0
WP_000291089.1\|2191322_2191583_-	DUF1108 family protein	Q4ZBM7	Staphylococcus_phage	1.2e-43	100.0
WP_000048124.1\|2191676_2191838_-	DUF1270 family protein	C7F7L3	Staphylococcus_phage	1.9e-20	100.0
WP_001120197.1\|2191834_2192155_-	DUF771 domain-containing protein	A0A2I6PDH6	Staphylococcus_phage	1.5e-56	100.0
WP_000549548.1\|2192213_2192444_+	hypothetical protein	A0A0H3U2T9	Staphylococcus_phage	9.4e-37	100.0
WP_001001356.1\|2192440_2192617_-	hypothetical protein	A0A2I6PEL1	Staphylococcus_phage	8.8e-27	100.0
WP_111759474.1\|2192632_2193382_-	phage antirepressor KilAC domain-containing protein	A0A1W6JPN2	Staphylococcus_phage	9.9e-136	99.2
WP_000435348.1\|2193396_2193843_-	hypothetical protein	A0A075M4D9	Staphylococcus_phage	1.1e-78	100.0
WP_000639923.1\|2193855_2194098_-	DUF739 family protein	A0A1X9H035	Staphylococcus_phage	1.6e-39	100.0
WP_001083975.1\|2194261_2194978_+	helix-turn-helix domain-containing protein	A0A1X9H038	Staphylococcus_phage	5.4e-131	100.0
WP_001557601.1\|2194989_2195844_+	restriction endonuclease	A0A1X9H037	Staphylococcus_phage	7.3e-151	100.0
WP_000345949.1\|2195917_2196064_+	hypothetical protein	A0A1X9H032	Staphylococcus_phage	3.3e-19	100.0
WP_000109189.1\|2196060_2196246_+	hypothetical protein	U5U7D6	Staphylococcus_phage	2.3e-25	100.0
WP_000705240.1\|2196316_2196499_+	hypothetical protein	A0A2I6PDR4	Staphylococcus_phage	5.3e-27	100.0
WP_001549185.1\|2196576_2197290_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A1X9H026	Staphylococcus_phage	5.0e-129	100.0
WP_000857198.1\|2197480_2198518_+\|integrase	site-specific integrase	A0A1X9H022	Staphylococcus_phage	2.6e-179	100.0
WP_000595324.1\|2199636_2200653_-	bi-component leukocidin LukGH subunit G	A0A2I6PER8	Staphylococcus_phage	1.1e-25	29.0
WP_000791407.1\|2200674_2201730_-	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	2.8e-35	34.3
WP_000195429.1\|2202198_2203371_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
2202147:2203473	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LS483319

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection