CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483332	Streptococcus pyogenes strain NCTC12696 chromosome 1	3 crisprs	DinG,csm6,cas9,cas1,cas2,csn2,cas3,DEDDh,csa3	0	1	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483332_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483332_1

779973-780067

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTATGCTGTTTTGAATGGTC	CRISPRCasFinder

1 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LS483332_1

>merge|NZ_LS483332|1|779973-780067|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACCACTAGACATCTCAACATCTGGAACGGGATGTTTTAGAGCTATGCTATTTTGAATGGTC

>NZ_LS483332|1|1|779973-780067|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTC	CCAAAACCACTAGACATCTCAACATCTGGAACGGGAT
GTTTTAGAGCTATGCTATTTTGAATGGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483332.1\|WP_002989931.1\|788114_788942_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	unknown	unknown	gnl\|CDD\|226239
NZ_LS483332.1\|WP_038432934.1\|772031_772796_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_LS483332.1\|WP_011106808.1\|767956_769312_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_LS483332.1\|WP_038432936.1\|772795_773428_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_LS483332.1\|WP_002989949.1\|779207_779870_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LS483332.1\|WP_002989943.1\|780717_782550_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_LS483332.1\|WP_038432947.1\|786356_786782_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NZ_LS483332.1\|WP_011528593.1\|787308_788118_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
NZ_LS483332.1\|WP_038432938.1\|773907_778011_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LS483332.1\|WP_032460891.1\|778010_778880_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_LS483332.1\|WP_002989951.1\|778876_779218_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LS483332.1\|WP_038432945.1\|785130_786150_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_LS483332.1\|WP_002989934.1\|786800_787292_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NZ_LS483332.1\|WP_111704599.1\|782736_784365_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|237171
NZ_LS483332.1\|WP_002984836.1\|790730_791519_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|227095
NZ_LS483332.1\|WP_023080001.1\|771279_772032_+\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NZ_LS483332.1\|WP_023080002.1\|770139_771270_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_LS483332.1\|WP_002989938.1\|784563_785001_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_LS483332.1\|WP_038432948.1\|789077_790727_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LS483332.1\|WP_023080006.1\|769435_770077_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LS483332.1\|WP_002989931.1\|788114_788942_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
NZ_LS483332.1\|WP_038432934.1\|772031_772796_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.73339e-127
NZ_LS483332.1\|WP_011106808.1\|767956_769312_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_LS483332.1\|WP_038432936.1\|772795_773428_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	6.77957e-87
NZ_LS483332.1\|WP_002989949.1\|779207_779870_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.6851e-120
NZ_LS483332.1\|WP_002989943.1\|780717_782550_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_LS483332.1\|WP_038432947.1\|786356_786782_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	1.31128e-30
NZ_LS483332.1\|WP_011528593.1\|787308_788118_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	2.10148e-76
NZ_LS483332.1\|WP_038432938.1\|773907_778011_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LS483332.1\|WP_032460891.1\|778010_778880_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.0115e-131
NZ_LS483332.1\|WP_002989951.1\|778876_779218_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.79e-58
NZ_LS483332.1\|WP_038432945.1\|785130_786150_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	1.48663e-102
NZ_LS483332.1\|WP_002989934.1\|786800_787292_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	8.80769e-55
NZ_LS483332.1\|WP_111704599.1\|782736_784365_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	2.89557e-12
NZ_LS483332.1\|WP_002984836.1\|790730_791519_+\|response-regulator-transcription-factor	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	5.79862e-82
NZ_LS483332.1\|WP_023080001.1\|771279_772032_+\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	6.29729e-107
NZ_LS483332.1\|WP_023080002.1\|770139_771270_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_LS483332.1\|WP_002989938.1\|784563_785001_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	3.9427e-84
NZ_LS483332.1\|WP_038432948.1\|789077_790727_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.58211e-77

>NZ_LS483332.1|WP_002989949.1|779207_779870_+|type-II-A-CRISPR-associated-protein-Csn2
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYKYEEDSELKFFDRKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>NZ_LS483332.1|WP_002989951.1|778876_779218_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>NZ_LS483332.1|WP_032460891.1|778010_778880_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFVYNGKEMYLTNIVSDYTKKVVKALNNEGKGVPEFRI
>NZ_LS483332.1|WP_038432938.1|773907_778011_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKVDLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDTKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPYQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNTSLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDKEMIEERLKKYANLFDDKVMKQLKRRHYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLINDDSLTFKEAIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQTVKIVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVRKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAKNIIHLFTLTNLGAPAAFKYFDTTIERNRYKSIKEVLDATLIHQSITGLYETRIDLSQLGGD
>NZ_LS483332.1|WP_038432936.1|772795_773428_+|TIGR01906-family-membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVIFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>NZ_LS483332.1|WP_038432934.1|772031_772796_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVRSMLANQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NZ_LS483332.1|WP_023080001.1|771279_772032_+|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNILVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGCLLVDILAYFALLNPDTRKVATIPEDLVAPFKTDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQIISDGQLNAQAMIEWRAIKPIESETD
>NZ_LS483332.1|WP_023080002.1|770139_771270_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFYSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NZ_LS483332.1|WP_023080006.1|769435_770077_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTPKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>NZ_LS483332.1|WP_011106808.1|767956_769312_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFQLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>NZ_LS483332.1|WP_002989943.1|780717_782550_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDAKK
>NZ_LS483332.1|WP_111704599.1|782736_784365_+|LPXTG-cell-wall-anchor-domain-containing-protein
MNKTKQNKTKQNKTKQNKTKQNKTKQNKTKHSLLCRYGLTSAAALLLTFGGASAVKANEGENGQNIAQQQQKRNDLLSALIDGISRLEKKQFPHPGSTGLDDTYMNSLIQYLQERKQVEDSWRASLLKGIQDHVLDGQDGQNGETGPMGPRGEAGKDGAKGDRGETGPAGPMGPRGEAGPTGPMGPRGEAGKDGAKGDRGETGPQGPAGKDGEKGEPGPRGEAGAQGPAGPQGPRGDKGETGDKGEQGPAGKDGAKGDRGETGPQGPAGKDGEKGEPGPRGEAGAQGPAGPQGPRGDKGETGDKGEQGPAGKDGEKGEPGPRGEAGAQGPAGPQGPRGDKGETGDKGEQGPAGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQDGQDGQDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPGKPAPKTPEAPQKPDTAPDTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>NZ_LS483332.1|WP_002989938.1|784563_785001_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
METSDELKQRIGDLSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>NZ_LS483332.1|WP_038432945.1|785130_786150_+|YeiH-family-putative-sulfate-export-transporter
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTEEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGSQKWLCIDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLLGLSNEVFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEENFSLRKSFPRFILFFLLASLITTLMTSFGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>NZ_LS483332.1|WP_038432947.1|786356_786782_+|PTS-sugar-transporter-subunit-IIA
MERKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLSPATDSEDDFFD
>NZ_LS483332.1|WP_002989934.1|786800_787292_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRATDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NZ_LS483332.1|WP_011528593.1|787308_788118_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAINKQTTFDSKESEEEDFFA
>NZ_LS483332.1|WP_002989931.1|788114_788942_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>NZ_LS483332.1|WP_038432948.1|789077_790727_+|sensor-histidine-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDDLGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQDLLFASNPHLGNVFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPIIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE
>NZ_LS483332.1|WP_002984836.1|790730_791519_+|response-regulator-transcription-factor
MYKLVIIEDEHIIRKWLRYAIDYKALDILVIGEAKDGKEGAVLIKESQPDIVLTDINMPIMTAFDMFEATKDQTYAKIILSGYADFPNARSAIHYGVLEFLTKPIEKAALWECLQTIIAKIEKQKGSNQKTDACVYIPLPQMTDQIPEVVKDILEWVHAHFQDKISTSRLAHDLGYSESYIYQNIKKHLQMPLSDYINQYRINQAIQLMQQEPDLMVYEIAQAVGIYDYRYFDRVFKKYLGQTVKAFKEEHFMKDTDRSKPC

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Crispr_ID: NZ_LS483332_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483332_2

858735-858824

Orphan

Consensus_repeat	Method
ATCCAAAGATGCTGTTGAAGTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483332_2

>merge|NZ_LS483332|2|858735-858824|CRISPRCasFinder
ATCCAAAGATGCTGTTGAAGTTTATAGTGGTATTGCCGCAGAAACCGTTGAAGAAAAGTGGCAAGATACCAAAGATGCTGTTGAAGTTTA

>NZ_LS483332|2|2|858735-858824|CRISPRCasFinder
ATCCAAAGATGCTGTTGAAGTTTA	TAGTGGTATTGCCGCAGAAACCGTTGAAGAAAAGTGGCAAGA
TACCAAAGATGCTGTTGAAGTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483332.1\|WP_002984629.1\|860052_860703_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|224191
NZ_LS483332.1\|WP_023610315.1\|862196_862988_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|234574
NZ_LS483332.1\|WP_038432319.1\|844928_846185_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_LS483332.1\|WP_038432331.1\|856677_857427_+\|sortase	unknown	unknown	gnl\|CDD\|226287
NZ_LS483332.1\|WP_011017769.1\|860699_861140_-\|DUF1836-domain-containing-protein	unknown	unknown	gnl\|CDD\|378076
NZ_LS483332.1\|WP_023610318.1\|866260_867607_+\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	unknown	unknown	gnl\|CDD\|235416
NZ_LS483332.1\|WP_002984645.1\|852997_853981_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_LS483332.1\|WP_002989793.1\|846191_847169_+\|nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|377262
NZ_LS483332.1\|WP_023610295.1\|863996_866126_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|235516
NZ_LS483332.1\|WP_023610309.1\|861358_862207_+\|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl\|CDD\|236570
NZ_LS483332.1\|WP_010922308.1\|854171_856658_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_LS483332.1\|WP_038432321.1\|847778_849503_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LS483332.1\|WP_002984653.1\|847169_847769_+\|lysozyme-family-protein	unknown	unknown	gnl\|CDD\|372680
NZ_LS483332.1\|WP_038432322.1\|849499_851227_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LS483332.1\|WP_023610321.1\|859024_859936_-\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_LS483332.1\|WP_023079447.1\|851467_852838_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NZ_LS483332.1\|WP_002989783.1\|857509_857923_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319940
NZ_LS483332.1\|WP_011284801.1\|867759_869166_+\|pyruvate-carboxylase-subunit-B	unknown	unknown	gnl\|CDD\|79056
NZ_LS483332.1\|WP_011054501.1\|863052_863889_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_LS483332.1\|WP_009881173.1\|869208_869523_+\|membrane-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LS483332.1\|WP_002984629.1\|860052_860703_-\|hemolysin-III-family-protein	gnl\|CDD\|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	1.15731e-65
NZ_LS483332.1\|WP_023610315.1\|862196_862988_+\|ribonuclease-HII	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	2.76564e-108
NZ_LS483332.1\|WP_038432319.1\|844928_846185_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_LS483332.1\|WP_038432331.1\|856677_857427_+\|sortase	gnl\|CDD\|226287	COG3764, SrtA, Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane].	1.10894e-74
NZ_LS483332.1\|WP_011017769.1\|860699_861140_-\|DUF1836-domain-containing-protein	gnl\|CDD\|378076	pfam08876, DUF1836, Domain of unknown function (DUF1836). This family of proteins are functionally uncharacterized.	2.69438e-38
NZ_LS483332.1\|WP_023610318.1\|866260_867607_+\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	gnl\|CDD\|235416	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed.	0
NZ_LS483332.1\|WP_002984645.1\|852997_853981_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_LS483332.1\|WP_002989793.1\|846191_847169_+\|nucleoid-associated-protein	gnl\|CDD\|377262	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein.	1.27144e-26
NZ_LS483332.1\|WP_023610295.1\|863996_866126_+\|type-I-DNA-topoisomerase	gnl\|CDD\|235516	PRK05582, PRK05582, type I DNA topoisomerase.	0
NZ_LS483332.1\|WP_023610309.1\|861358_862207_+\|ribosome-biogenesis-GTPase-YlqF	gnl\|CDD\|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	1.10172e-159
NZ_LS483332.1\|WP_010922308.1\|854171_856658_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_LS483332.1\|WP_038432321.1\|847778_849503_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.3149e-127
NZ_LS483332.1\|WP_002984653.1\|847169_847769_+\|lysozyme-family-protein	gnl\|CDD\|372680	pfam13702, Lysozyme_like, Lysozyme-like.	3.90251e-79
NZ_LS483332.1\|WP_038432322.1\|849499_851227_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.04151e-156
NZ_LS483332.1\|WP_023610321.1\|859024_859936_-\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	2.16611e-87
NZ_LS483332.1\|WP_023079447.1\|851467_852838_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	3.59151e-97
NZ_LS483332.1\|WP_002989783.1\|857509_857923_+\|VOC-family-protein	gnl\|CDD\|319940	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein Bacillus subtilis YwkD and similar proteins. uncharacterized subfamily of vicinal oxygen chelate (VOC) family contains Bacillus subtilis YwkD and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.20751e-70
NZ_LS483332.1\|WP_011284801.1\|867759_869166_+\|pyruvate-carboxylase-subunit-B	gnl\|CDD\|79056	PRK12581, PRK12581, oxaloacetate decarboxylase; Provisional.	0
NZ_LS483332.1\|WP_011054501.1\|863052_863889_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	1.56545e-106

>NZ_LS483332.1|WP_002989783.1|857509_857923_+|VOC-family-protein
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKVTSDPYYQAPPKRVSQPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE
>NZ_LS483332.1|WP_038432331.1|856677_857427_+|sortase
MVKKQKRRKMKSMSWARKLLIAVLLILGLALLFNKPIRNTLIARNSNKYQVTKVSKKQIKKNKEAKSTFDFQAVEPVSTESVLQAQMAAQQLPVIGGIAIPELGINLPIFKGLGNTELIYGAGTMKEEQVMGGENNYSLASHHIFGITGSSQMLFSPLERAQNGMSIYLTDKEKIYEYIIKDVFTVAPERVDVIDDTAGLKEVTLVTCTDIEATERIIVKGELKTEYDFDKAPADVLKAFNHSYNQVST
>NZ_LS483332.1|WP_010922308.1|854171_856658_+|DNA-gyrase-subunit-A
MQDRNLIDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGAAAQRYTEARMSKIALELLRDINKNTVNFQDNYDGSEREPVVLPARFPNLLVNGATGIAVGMATNIPPHNLAESIDAVKMVMEHPDCTTRELMEVIPGPDFPTGALVMGRSGIHRAYDTGKGSIVLRSRTEIETTQTGRERIVVTEFPYGVNKTKVHEHIVRLAQEKRLEGITAVRDESSREGVRFVIEIRREASATVILNNLFKLTSLQTNFSFNMLAIENGVPKILSLRQIIDNYISHQKEVIIRRTRFDKDKAEARAHILEGLLIALDHLDEVIAIIRNSETDVIAQTELMSRFDLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIADLSDILAKPERIITIIKEEMDEIKRKYANPRRTELMVGEVLSLEDEDLIEEEDVLITLSNKGYIKRLAQDEFRAQKRGGRGVQGTGVNNDDFVRELISTSTHDTLLFFTNFGRVYRLKAYEIPEYGRTAKGLPIVNLLKLEDGETIQTIINARKEETAGKSFFFTTKQGIVKRTEVSEFNNIRQNGLRALKLKEGDQLINVLLTSGQDDIIIGTHSGYSVRFNEASIRNMGRSATGVRGVKLREDDRVVGASRIQDNQEVLVITENGFGKRTSATDYPTKGRGGKGIKTANITPKNGQLAGLVTVDGTEDIMVITNKGVIIRTNVANISQTGRATLGVKIMKLDADAKIVTFTLVQPEDSSIAEINTDRENSISKNKDN
>NZ_LS483332.1|WP_002984645.1|852997_853981_-|L-lactate-dehydrogenase
MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYSDCHDADLVVLTAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAAKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVALARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFAKEEFASAAKN
>NZ_LS483332.1|WP_023079447.1|851467_852838_+|FAD-dependent-oxidoreductase
MSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGCGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVILIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDMSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITMAALGAKD
>NZ_LS483332.1|WP_038432322.1|849499_851227_+|ABC-transporter-ATP-binding-protein
MIKTYHHLLKRVLQDLLKKPLPVCILVIASFVQVGLSVYLPVLIGKAVDMSLSVNSWQTLKWLLGQMLVIIVVNTLIQWVMPLVYSRLLYQYSQQLKDKLLEKIHRLPFAYLDRQTIGDLVSRVITDTEQLINGLQMVFNQFILGLLTILCTIIAMAQIDWLMLILVLVLTPSSLFLARFIAQKSFHYAQAQTKSRGNLAQFTEEILRQEGLVQLFNAQEQSICDYHVLNKTYCEASQKAIFYASTVNPATRFINSVIYALLAGLGAVRIMAGLFSVGQLTTFLNVVVQYTKPFNDISSVLAEIQSSLACAQRLYDLLDIEIKEQEHFLTFKASAVKGQIDFEEVSFSYQKDRPLLKDINFSVPAGSKVAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSITGMVLQETWLKDATVHELIAYGSEEASRDEVVAAAKAAHAHFFIMQLPKTYDTYLSASDDALSQGQLQLLAIARMFLKKPKVLILDEATSSIDIRTEAVIQEALKELMRGRTSFIIAHRLSTIQSADLILVMDQGRLVEWGTHASLMSKNGCYARLQKIE
>NZ_LS483332.1|WP_038432321.1|847778_849503_+|ABC-transporter-ATP-binding-protein
MKRLRPYVKGYLKESILGPLFKLLEALFELLVPLLIANMIDISISQHNSQGILRVVLTLFGLATISLLLSVTAQYFSSKAAVGFTRQMTDDLFKKIMFLSKEDQDHLGYASLLSRLTSDSFQIQTGINQFLRLFLRAPIIVCGAMVMAYWISPSLTLWFVMMVIVLLTLVFVMSHLLGPLYLLIRRETDYLVRLTSQQLQGIRVIKAFNQTQKELQAFKQQNMLLSRHQYQAATLANVLNPMTFLVVNLTLLILIWQGSWQVAHRSLSQGMLVALINYLLQILAELLKMTMLMGTINQSVTAAKRINQVFVLADEAPLPLLKDGPISTHLLTIRHLTFTYPGAAEPSLYDIQLSADQGEWIGIIGGTGAGKTTLIDLICQTYSQYSGEISLNWQGEVPKTLTEWRNVIALVPQKAQLFKGTIRSNLLLGQSMPISDEELWRALELAQSKEFVAALPEQLEAPVEAFGRHFSGGQRQCLAIARALLKPKPILILDDASSALDNETRGRLFKALKEELSDVLVILVTQSIKNLQFADKILVLEQGHQLDFASHDQLKVSNALYQEMLALYVKGEQK
>NZ_LS483332.1|WP_002984653.1|847169_847769_+|lysozyme-family-protein
MFRLLKRACSFLLLFVIYQSFVIHHNVQRVLAYKPMVEKTLAENDTKANVDLVLAMIYTETKGGEADVMQSSESSSGQKNSITDSQASIEHGVNLLSHNLALAEEAGVDSWTAVQAYNFGTAYIDYIAKHGGQNTVDLATTYSKTVVAPSLGNTSGQTYFYYHPLALISGGKLYKNGGNIYYSREVHFNLYLIELMSLF
>NZ_LS483332.1|WP_002989793.1|846191_847169_+|nucleoid-associated-protein
MLDSYIKRIVIHQFSPNDTELLLSDRLVSITPRIDEYFRKKLAKVFSDEAKRGQFEANNTFFTTIGDDLLETSVTIAQLWKEAFVISEDQKTNDLVFVQFDKDGEPFFAFLRIALKEQFAHLSDNYEHPFTVTQNNLPSPTQTPDEALVINLKSGQYYLIEKRVKHNGSFANYFSEHLLKVTPEQSVKKSIKMIEQTAQKIAEHFNQDDFTFQSKMKSTLFKQLEADDVLSPEKLADQLFDDNLTARLTFVDQVKDVIPEPIKISDIDHSRQIKKLENQKLSLSNGIELTVPNAIYQDAEAVEFLLNDDGTYSILIKNIEDIKTK
>NZ_LS483332.1|WP_038432319.1|844928_846185_+|serine-hydroxymethyltransferase
MIFDKGNVEDFDKELWDAIHAEEERQEHHIELIASENMVSKAVMAAQGSVLTNKYAEGYPGNRYYGGTECVDIVETLAIERAEKLFGAAFANVQAHSGSQANAAAYMALIEAGDTVLGMDLAAGGHLTHGSPVNFSGKTYHFVGYSVDADTEMLNYEAILEQAKAVQPKLIVAGASAYSRSIDFEKFRAIADHVGAYLMVDMAHIAGLVAAGVHPSPVPYAHIVTSTTHKTLRGPRGGLILTNDEALAKKINSAVFPGLQGGPLEHVIAAKAVAFKEALDPAFKDYAQAIIDNTAAMAAVFAQDDRFRLISGGTDNHVFLVDVTKVIANGKLAQNLLDEVNITLNKNAIPFETLSPFKTSGIRIGCAAITSRGMGVKESQTIAHLIIKALVNHDQETILEEVRQEVRQLTDAFPLYKK
>NZ_LS483332.1|WP_023610321.1|859024_859936_-|diacylglycerol-kinase-family-lipid-kinase
MKTVRIFYNPNSGKKEDQLAGQVKDYFCQHGFSEDSVEVITPKDADQAFQLAKQAAKDKIDLVIPLGGDGTLNKIIGGIYEGGAHCLIGLVPSGTVNNFAKAMHIPLQITEALDTILTGQIKQVDICKANQQYMISSLTLGLLADIAADVTAEEKRRFGPLAFLKDSIRILKRNRSYAISLISHNHRIHLKTKFLLITMTNTIAGFPSFSPGAQADDGYFQVYTMKKVSFFKFLWHINDFKQGDFSKAEEISHFQANTLSLLPQAKKQAILPRARIDGDKSDYLPIQLDIIPKAISIIVPTED
>NZ_LS483332.1|WP_002984629.1|860052_860703_-|hemolysin-III-family-protein
MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISLFLMFLSSTIYHSMAYGSVHKYILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQWGITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVIIQKTSLAFGLLMLFGGLSYTIGAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML
>NZ_LS483332.1|WP_011017769.1|860699_861140_-|DUF1836-domain-containing-protein
MIFPSLPYWKDLPDLDLYLDQVLLYVNQCTDFSEVSDNKSLTASMINNYVKHGYVTKPIKKKYQKQQLARLIAISLFKTVFPIQDISRVLEELQAQADSESLYNTFVTCWNQKAPIEEDIPPIVQVACQTVKDYHKTIYLSQEVTQ
>NZ_LS483332.1|WP_023610309.1|861358_862207_+|ribosome-biogenesis-GTPase-YlqF
MATIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADLADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTESAKELMADKIQRLRERGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFREYYPNRLTKRFKNIPLEEEAPEIIMTLTRQLGFKDDYDRFYTLFVKEVRDGKLGQYTLDQVGDMDAD
>NZ_LS483332.1|WP_023610315.1|862196_862988_+|ribonuclease-HII
MPTSIKAIKESLEAVTSLLDPLFQELATDTRSGVQKALKSRQKAIQADLAEEERLEAMLSYEKSLYKEGYQAIAGIDEVGRGPLAGPVVAVCVILPQHCKIKGLNDSKKIPKSKHETIYQAVKEKALAIGIGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMTLDIAIPQQSIIKGDANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGITPIHRKSFEPVKSMCCDSTNP
>NZ_LS483332.1|WP_011054501.1|863052_863889_+|DNA-protecting-protein-DprA
MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTIAIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGRDIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY
>NZ_LS483332.1|WP_023610295.1|863996_866126_+|type-I-DNA-topoisomerase
MGTKTTTKPKTGTKKSTTKKKSTAKKNLVIVESPAKAKTIEKYLGRSYKVVASVGHIRDLKKSSMSIDFDNNYEPQYINIRGKGPLINSLKKEAKAAKKVYLASDPDREGEAISWHLSHILGLDPEDKNRVVFNEITKDAVKNAFVEPRQIDMNLVDSQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIIDRENEIKAFVPEEYWSIDGLFKKGTKKFQASFYGLDGKKMKLSNNDDVKAVLAKLKGDDFLVSKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMVAQQLYEGIHLGENGTQGLITYMRTDSTRISPVAQNDAAQFISNRFGANYSKHGNRVKNTSGAQDAHEAIRPSSVNHTPEAIAKYLNKDQLKLYTLIWNRFVASQMTAAVFDTVKVNLEQNGVLFVANGSQMKFDGYMAVYNDSDKNKMLPEMEEGENVKKVSTSPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTLEVIQRRYYVKLSAKRFEPTELGEIVNKLIVEFFPDIVDVAFTAEMEGKLDQVEIGEEQWQHVIDQFYQPFVKELNKAESEIEKIQIKDEPAGFDCDVCGHPMVIKLGRFGKFYACSNFPECRNTKAITKEIGVTCPICHKGQVIERKTKRNRIFYGCDRYPECDFTSWDLPVGRDCPKSGDYLIEKKVRGGKQVMCSNETCDYKEEKIK
>NZ_LS483332.1|WP_023610318.1|866260_867607_+|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO
MSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREGYAESVTAELENHPLIEVIRDEITEVPNDAITVIATGPLTSDALAEKIHALNGGDGFYFYDAAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHDALTTAEEAPLNAFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTAIGSLPHYVTHADSKHFQPMNVNFGIIKELEGPRIRDKKERYEAIASRALADLDTCLASL
>NZ_LS483332.1|WP_011284801.1|867759_869166_+|pyruvate-carboxylase-subunit-B
MIQFGGFSMQQQVAITETVLRDGHQSLMATRLSIEDMLPVLTILDKIGYYSLECWGGATFDACIRFLNEDPWERLRTLKKGLPNTRLQMLLRGQNLLGYRHYADDIVDKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGADSICIKDMAGILTPKAAKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGADRIDTALSPFSEGTSQPATESMYLALKEAGYDITLDETLLEQAANHLRQVRQKYLADGILDPSLLFPDPRTLQYQVPGGMLSNMLSQLKQANAESKLEEVLAEVPRVRKDLGYPPLVTPLSQMVGTQAAMNVILGKPYQMVSKEIKQYLAGDYGKTPAPVNEDLKRSQIGSAPVTTNRPADQLSPEFEVLKAEVADLAQTDEDVLTYALFPSVAKPFLTTKYQTDDVIKVTAFIKA
>NZ_LS483332.1|WP_009881173.1|869208_869523_+|membrane-protein
MTYSFIDILQVTLVSLFLVLTCLTGIMGLMMLSGKLLSQEKKTLSQQASSIPQEQEADKLSGEALETLLAKDELARIAVMTSLAYASQEESGKRFEVIAVERKS

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Crispr_ID: NZ_LS483332_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483332_3

958764-958865

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483332_3

>merge|NZ_LS483332|3|958764-958865|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>NZ_LS483332|3|3|958764-958865|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483332.1\|WP_002984449.1\|958888_959446_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_LS483332.1\|WP_002984451.1\|956898_958713_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_LS483332.1\|WP_002992415.1\|954981_955611_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_LS483332.1\|WP_002984447.1\|959663_961166_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_LS483332.1\|WP_002989626.1\|956367_956703_-\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_LS483332.1\|WP_002989605.1\|968966_969587_+\|DUF3862-domain-containing-protein	unknown	unknown	gnl\|CDD\|289729
NZ_LS483332.1\|WP_002992581.1\|969843_972108_-\|glycogen/starch/alpha-glucan-family-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_LS483332.1\|WP_002992417.1\|955620_956262_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_LS483332.1\|WP_038432363.1\|949939_951262_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_LS483332.1\|WP_009880829.1\|952986_953760_-\|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl\|CDD\|369335
NZ_LS483332.1\|WP_014635494.1\|954129_954966_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NZ_LS483332.1\|WP_002984469.1\|946480_946729_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LS483332.1\|WP_014635492.1\|951381_952617_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_LS483332.1\|WP_002984444.1\|961228_962242_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_LS483332.1\|WP_002984433.1\|966695_967481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483332.1\|WP_002984441.1\|962321_965432_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
NZ_LS483332.1\|WP_002989607.1\|967611_968226_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_LS483332.1\|WP_002989617.1\|965616_965988_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_LS483332.1\|WP_002989648.1\|947091_949410_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_LS483332.1\|WP_002992425.1\|965987_966686_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054

Protein	Function_ID	Function_description	E-value
NZ_LS483332.1\|WP_002984449.1\|958888_959446_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
NZ_LS483332.1\|WP_002984451.1\|956898_958713_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_LS483332.1\|WP_002992415.1\|954981_955611_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.61041e-111
NZ_LS483332.1\|WP_002984447.1\|959663_961166_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_LS483332.1\|WP_002989626.1\|956367_956703_-\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
NZ_LS483332.1\|WP_002989605.1\|968966_969587_+\|DUF3862-domain-containing-protein	gnl\|CDD\|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	6.81674e-87
NZ_LS483332.1\|WP_002992581.1\|969843_972108_-\|glycogen/starch/alpha-glucan-family-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_LS483332.1\|WP_002992417.1\|955620_956262_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
NZ_LS483332.1\|WP_038432363.1\|949939_951262_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_LS483332.1\|WP_009880829.1\|952986_953760_-\|CAMP-factor-pore-forming-toxin-Cfa	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.06073e-97
NZ_LS483332.1\|WP_014635494.1\|954129_954966_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.58337e-109
NZ_LS483332.1\|WP_002984469.1\|946480_946729_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NZ_LS483332.1\|WP_014635492.1\|951381_952617_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	5.43501e-96
NZ_LS483332.1\|WP_002984444.1\|961228_962242_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_LS483332.1\|WP_002984441.1\|962321_965432_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_LS483332.1\|WP_002989607.1\|967611_968226_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
NZ_LS483332.1\|WP_002989617.1\|965616_965988_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
NZ_LS483332.1\|WP_002989648.1\|947091_949410_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483332.1\|WP_002992425.1\|965987_966686_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.0817e-63

>NZ_LS483332.1|WP_002984451.1|956898_958713_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NZ_LS483332.1|WP_002989626.1|956367_956703_-|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NZ_LS483332.1|WP_002992417.1|955620_956262_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NZ_LS483332.1|WP_002992415.1|954981_955611_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKSDAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NZ_LS483332.1|WP_014635494.1|954129_954966_-|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKGLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKDRQEKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>NZ_LS483332.1|WP_009880829.1|952986_953760_-|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NZ_LS483332.1|WP_014635492.1|951381_952617_+|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLLLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVSVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQRTSIWRRHESWSLLFHQITPIAKKQLHHTHYRIVKM
>NZ_LS483332.1|WP_038432363.1|949939_951262_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQIVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NZ_LS483332.1|WP_002989648.1|947091_949410_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NZ_LS483332.1|WP_002984469.1|946480_946729_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>NZ_LS483332.1|WP_002984449.1|958888_959446_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NZ_LS483332.1|WP_002984447.1|959663_961166_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NZ_LS483332.1|WP_002984444.1|961228_962242_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NZ_LS483332.1|WP_002984441.1|962321_965432_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDAKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NZ_LS483332.1|WP_002989617.1|965616_965988_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NZ_LS483332.1|WP_002992425.1|965987_966686_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDNSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NZ_LS483332.1|WP_002984433.1|966695_967481_+|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NZ_LS483332.1|WP_002989607.1|967611_968226_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>NZ_LS483332.1|WP_002989605.1|968966_969587_+|DUF3862-domain-containing-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQAAHQDKRANFEKIKLATVDSSFTGGTSLEELISLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>NZ_LS483332.1|WP_002992581.1|969843_972108_-|glycogen/starch/alpha-glucan-family-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSISSLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDDSWLVPTDISYDVPFKNFTLKSRLDRIDVLGYRRDTKNYLNLFDIEGVDYGLIKDGISFDKTQIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMAFADDKAVHAKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEERLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448944	Streptococcus phage Javan452, complete genome	12345-12381	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448672	Streptococcus phage Javan117, complete genome	7926-7962	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448849	Streptococcus phage Javan128, complete genome	7830-7866	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448850	Streptococcus phage Javan132, complete genome	12655-12691	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448675	Streptococcus phage Javan129, complete genome	12135-12171	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448673	Streptococcus phage Javan119, complete genome	11431-11467	7	0.811
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448845	Streptococcus phage Javan118, complete genome	9809-9845	8	0.784
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK449010	Streptococcus phage Javan90, complete genome	10515-10551	9	0.757
NZ_LS483332_1	1.1\|780002\|37\|NZ_LS483332\|CRISPRCasFinder	780002-780038	37	MK448833	Streptococcus phage Javan87, complete genome	10515-10551	9	0.757

1. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gttttatcgctagacatctcaacatctggaacgggat	Protospacer
 .   *.*.****************************

2. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gttttatcgctagacatctcaacatctggaacgggat	Protospacer
 .   *.*.****************************

3. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gttttatcgctagacatctcaacatctggaacgggat	Protospacer
 .   *.*.****************************

4. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gttttatcgctagacatctcaacatctggaacgggat	Protospacer
 .   *.*.****************************

5. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gtattatcactagacatctcaacatctggaacaggtt	Protospacer
 .*  *.*************************.** *

6. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 7, identity: 0.811

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gtattatcgctagacatttcaacatctggaacgggat	Protospacer
 .*  *.*.********.*******************

7. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 8, identity: 0.784

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gtattatcgctagacatttcaacatctggaacgggtt	Protospacer
 .*  *.*.********.***************** *

8. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 9, identity: 0.757

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gtattatcgctagacatctcaacatctggtacaggtt	Protospacer
 .*  *.*.******************** **.** *

9. spacer 1.1|780002|37|NZ_LS483332|CRISPRCasFinder matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 9, identity: 0.757

ccaaaaccactagacatctcaacatctggaacgggat	CRISPR spacer
gtattatcgctagacatctcaacatctggtacaggtt	Protospacer
 .*  *.*.******************** **.** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36636 : 48939

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038432701.1\|36636_40362_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.3e-39	26.9
WP_038432703.1\|40522_41977_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_014407190.1\|42004_43027_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	1.2e-62	41.1
WP_002986700.1\|43194_43749_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
WP_038432705.1\|43921_45469_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	3.4e-45	52.4
WP_038432708.1\|45527_46652_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
WP_038432711.1\|46904_48170_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_023079042.1\|48447_48939_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.4e-18	43.1

DBSCAN-SWA_2

326696 : 424170

Streptococcus_phage(20.69%)

transposase,bacteriocin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010921930.1\|326696_327332_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-65	63.4
WP_038432816.1\|327349_328225_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.3e-65	44.8
WP_038432817.1\|328243_328483_+	Tpl protein	NA	NA	NA	NA
WP_002985838.1\|328886_329210_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
WP_002985836.1\|329214_330078_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	75.0
WP_002985833.1\|330104_330497_+	hypothetical protein	NA	NA	NA	NA
WP_038432821.1\|330543_331173_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_038432822.1\|331471_331828_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.1e-39	65.0
WP_021340916.1\|331901_332729_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.7e-128	79.9
WP_012560476.1\|332962_334144_+	L-lactate oxidase	NA	NA	NA	NA
WP_038432823.1\|334409_339353_+\|protease	CXC chemokine-degrading serine protease SpyCEP	NA	NA	NA	NA
WP_038432979.1\|340122_340830_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_038432824.1\|341072_343070_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.3e-86	35.0
WP_023611737.1\|343565_344579_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	5.5e-97	52.7
WP_038432825.1\|344582_345071_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.0e-11	37.5
WP_038432826.1\|345037_347218_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	9.5e-171	43.2
WP_038432827.1\|347423_348176_-	ADP-ribosyltransferase	NA	NA	NA	NA
WP_051904305.1\|348635_349238_+	hypothetical protein	NA	NA	NA	NA
WP_038432828.1\|349513_349765_+	hypothetical protein	NA	NA	NA	NA
WP_038432829.1\|349858_350491_-	hypothetical protein	NA	NA	NA	NA
WP_002990848.1\|351001_351970_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	1.2e-88	52.3
WP_002990844.1\|352605_352842_+	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_021340581.1\|352834_353533_+	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.2e-10	25.2
WP_038432830.1\|353600_354560_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002993065.1\|354892_356230_+	MFS transporter	NA	NA	NA	NA
WP_038432832.1\|356402_357785_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	8.5e-32	36.0
WP_002990829.1\|357815_358370_+	NUDIX hydrolase	NA	NA	NA	NA
WP_021340729.1\|358369_358621_+	hypothetical protein	NA	NA	NA	NA
WP_010921957.1\|358640_359336_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_038432834.1\|359486_359828_+	hypothetical protein	NA	NA	NA	NA
WP_038432836.1\|359926_360574_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_038432837.1\|360719_361652_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_038432839.1\|361715_362441_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.8e-17	32.6
WP_011017448.1\|362441_363296_+	metal ABC transporter permease	NA	NA	NA	NA
WP_038432840.1\|363443_364250_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
WP_038432841.1\|364466_366872_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	3.8e-88	50.5
WP_030126115.1\|366941_367295_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_002990800.1\|367538_367964_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_002985768.1\|368069_368759_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_002985765.1\|369081_369810_+	UMP kinase	NA	NA	NA	NA
WP_002985763.1\|369838_370396_+	ribosome recycling factor	NA	NA	NA	NA
WP_023610041.1\|370504_371362_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_002990794.1\|371434_371944_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002985757.1\|371940_372156_+	YozE family protein	NA	NA	NA	NA
WP_023610050.1\|372311_373493_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	2.1e-15	39.6
WP_010921966.1\|373806_375579_+	oleate hydratase	NA	NA	NA	NA
WP_002990786.1\|375737_376790_+	PhoH family protein	W8D063	Erwinia_phage	1.2e-46	50.0
WP_009880369.1\|376835_377411_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_032467023.1\|377569_378067_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_002985746.1\|378047_378455_+	diacylglycerol kinase	NA	NA	NA	NA
WP_002985743.1\|378574_379471_+	GTPase Era	NA	NA	NA	NA
WP_038432842.1\|379491_379968_+	NUDIX hydrolase	NA	NA	NA	NA
WP_014635333.1\|381129_381576_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	4.1e-12	36.0
WP_011528336.1\|381798_382509_-\|bacteriocin	bacteriocin ABC transporter	NA	NA	NA	NA
WP_002994577.1\|382613_382850_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_002994580.1\|383147_383372_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_002994581.1\|383349_383526_+	hypothetical protein	NA	NA	NA	NA
WP_072135613.1\|383769_384132_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_028797129.1\|384742_384970_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002994587.1\|385018_385336_+	hypothetical protein	NA	NA	NA	NA
WP_020833317.1\|385401_385683_+\|transposase	transposase	NA	NA	NA	NA
WP_009880536.1\|385826_386012_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_002987929.1\|386325_386541_+\|transposase	transposase	U5P429	Shigella_phage	7.0e-10	45.5
WP_002992578.1\|388483_389233_+	response regulator transcription factor	A0A1V0E029	Clostridioides_phage	2.1e-21	28.0
WP_014635339.1\|389233_390568_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_011017462.1\|390715_390841_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_014635340.1\|390917_392282_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_038432843.1\|392292_394446_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	5.7e-43	28.3
WP_002994504.1\|395771_396017_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002987564.1\|396031_396214_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_012560514.1\|397408_397636_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003060803.1\|397648_397849_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_011054252.1\|398387_398669_+	hypothetical protein	NA	NA	NA	NA
WP_032467019.1\|398862_399264_+	hypothetical protein	NA	NA	NA	NA
WP_032462998.1\|399514_400585_+	hypothetical protein	NA	NA	NA	NA
WP_014635342.1\|400677_401076_+	hypothetical protein	NA	NA	NA	NA
WP_023605037.1\|401423_401693_-	quorum-sensing system protein StcA	NA	NA	NA	NA
WP_128650799.1\|402606_402675_-	peptide pheromone SHP2	NA	NA	NA	NA
WP_002990747.1\|402763_403630_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_002990742.1\|403801_404629_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
WP_002994141.1\|404625_405219_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_002994144.1\|405408_406911_+	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	6.7e-75	41.2
WP_002994146.1\|407032_408226_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_002990729.1\|408222_408369_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_002985700.1\|408414_408651_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_076707645.1\|408744_411078_+	ribonuclease R	Q0GXV6	Lactococcus_phage	8.8e-90	39.8
WP_002994152.1\|411080_411548_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.7e-41	57.0
WP_010921981.1\|411553_412273_+	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA
WP_002994169.1\|412389_413037_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_038432846.1\|413086_414013_-	DUF979 family protein	NA	NA	NA	NA
WP_011017476.1\|414012_414696_-	DUF969 domain-containing protein	NA	NA	NA	NA
WP_032464862.1\|414906_415833_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	3.4e-77	47.5
WP_020904973.1\|415977_416355_-	VOC family protein	NA	NA	NA	NA
WP_002985684.1\|416365_417031_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002985682.1\|417079_418165_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_002985680.1\|418338_419340_+	catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
WP_002985678.1\|419470_420469_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002994187.1\|420470_421805_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002985672.1\|422226_424170_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.0e-120	38.7

DBSCAN-SWA_3

622263 : 629663

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050580611.1\|622263_624474_-	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-268	69.2
WP_023609837.1\|624581_625745_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	7.6e-143	64.9
WP_002985140.1\|625741_626428_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_002990262.1\|626521_627688_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
WP_002992643.1\|627748_628090_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
WP_002992646.1\|628310_629663_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-29	23.8

DBSCAN-SWA_4

632878 : 697505

Bacillus_phage(16.67%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002985121.1\|632878_634093_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_011017643.1\|634130_635423_+	CapA family protein	A0A2H4JC87	uncultured_Caudovirales_phage	2.9e-34	30.8
WP_002985116.1\|635636_635951_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_002985112.1\|635962_636289_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_002985110.1\|636316_636610_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_038432896.1\|636961_637876_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_038432898.1\|637872_638331_+	signal peptidase II	NA	NA	NA	NA
WP_002985094.1\|638320_639211_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.6e-07	25.3
WP_002985093.1\|639605_640127_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_004218945.1\|640142_641402_+	uracil transporter	Q9KX94	Enterobacteria_phage	2.7e-61	36.2
WP_023609852.1\|641462_642398_+	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.0e-25	32.6
WP_002985087.1\|642441_643524_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	4.7e-62	36.9
WP_011054357.1\|643769_646946_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_011528494.1\|647151_648423_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_002985080.1\|648422_649133_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-36	42.5
WP_010922149.1\|649144_650365_+	ABC transporter permease	NA	NA	NA	NA
WP_010922150.1\|650618_652352_+	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	NA	NA	NA
WP_002985074.1\|652478_652751_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_002985072.1\|652760_653000_+	KH domain-containing protein	NA	NA	NA	NA
WP_023605073.1\|653935_656977_+	leucine-rich repeat protein	NA	NA	NA	NA
WP_011054362.1\|656996_657398_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_021733790.1\|657577_658453_-	cation transporter	NA	NA	NA	NA
WP_014635400.1\|658588_659110_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002994772.1\|659324_659843_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_011888986.1\|659832_660564_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_021733179.1\|660563_661556_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	8.2e-29	54.9
WP_000564846.1\|661725_662859_+\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_162472286.1\|662842_662968_+	exfoliative toxin	NA	NA	NA	NA
WP_038432903.1\|663058_664117_+	PTS transporter subunit IIC	NA	NA	NA	NA
WP_014635402.1\|664129_665053_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_021733178.1\|665308_666022_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-19	32.1
WP_002992553.1\|666018_666930_+	1-phosphofructokinase	NA	NA	NA	NA
WP_023605075.1\|666926_668873_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_010922159.1\|668965_669565_+	glycoside hydrolase family 73 protein	A0A249Y0X5	Enterococcus_phage	3.6e-11	33.8
WP_002990206.1\|669716_670424_+	glycoside hydrolase family 73 protein	Q332B8	Clostridium_botulinum_C_phage	1.9e-11	36.4
WP_148180940.1\|670995_671361_-	hypothetical protein	NA	NA	NA	NA
WP_014635407.1\|671380_672406_-\|protease	igG-degrading protease	NA	NA	NA	NA
WP_002985011.1\|673313_673694_+	DUF1149 family protein	NA	NA	NA	NA
WP_011054370.1\|673693_674542_+	DegV family protein	NA	NA	NA	NA
WP_002990193.1\|674666_675875_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	5.3e-38	45.0
WP_002990191.1\|675871_677749_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.9e-64	31.7
WP_107114784.1\|677771_677930_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_002990188.1\|678638_679049_+	peptide deformylase	E3SLL2	Synechococcus_phage	6.9e-06	30.6
WP_023080173.1\|679130_681143_-	5'-nucleotidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_031488355.1\|681362_682013_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_002984985.1\|682015_682684_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.3e-19	28.8
WP_002993949.1\|682692_683925_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_002984974.1\|684218_685097_+	mevalonate kinase	NA	NA	NA	NA
WP_002984972.1\|685078_686023_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_021299363.1\|686015_687023_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_010922169.1\|687015_688005_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_010922170.1\|688234_689512_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_038432910.1\|689498_690674_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_011017679.1\|690882_691722_+	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
WP_002984955.1\|691801_692299_+	dihydrofolate reductase	W5QU76	Bacillus_phage	8.6e-11	34.4
WP_002990165.1\|692318_692489_+	hypothetical protein	NA	NA	NA	NA
WP_009880296.1\|692618_693848_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.0e-137	60.5
WP_038432912.1\|693857_694457_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_002984942.1\|694604_695348_+	hypothetical protein	NA	NA	NA	NA
WP_038432914.1\|695405_697505_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	4.3e-120	39.2

DBSCAN-SWA_5

1001494 : 1032833

Bacillus_phage(20.0%)

integrase,transposase,protease

attL 999778:999793|attR 1018627:1018642

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
999778:999793	attL	NA	NA	NA	NA
WP_168417191.1\|1001494_1002836_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.0e-62	48.7
WP_038432370.1\|1003136_1004009_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_002984130.1\|1004232_1005543_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
WP_011284472.1\|1005620_1005914_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_009880536.1\|1006057_1006243_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_080284464.1\|1006300_1006516_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	8.8e-13	50.7
WP_014635546.1\|1006555_1006669_+\|transposase	transposase	NA	NA	NA	NA
WP_011017915.1\|1006685_1007417_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_011017916.1\|1007531_1007897_+	thioesterase family protein	NA	NA	NA	NA
WP_014407647.1\|1008016_1009237_-	MFS transporter	NA	NA	NA	NA
WP_002995506.1\|1009610_1011095_+	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_002984115.1\|1011199_1011601_-	PaaI family thioesterase	NA	NA	NA	NA
WP_032466998.1\|1012615_1014007_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	1.7e-261	98.9
WP_002984109.1\|1014055_1015507_-	LCP family protein	NA	NA	NA	NA
WP_002989310.1\|1015714_1016206_-	shikimate kinase	NA	NA	NA	NA
WP_009880589.1\|1016198_1017482_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_023609958.1\|1017592_1018558_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_002984100.1\|1018559_1019420_-	methionyl aminopeptidase	NA	NA	NA	NA
1018627:1018642	attR	NA	NA	NA	NA
WP_002989302.1\|1019435_1020719_-	CBS domain-containing protein	NA	NA	NA	NA
WP_002984095.1\|1020727_1021270_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_038432372.1\|1021507_1022413_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002989295.1\|1022770_1024030_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_002989292.1\|1024203_1025400_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.5e-138	65.4
WP_038432373.1\|1025936_1028294_-	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_002984078.1\|1028497_1029439_+	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
WP_162472283.1\|1029413_1029617_-	DUF3272 family protein	NA	NA	NA	NA
WP_023079397.1\|1029711_1031382_-	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	3.9e-47	40.6
WP_038432374.1\|1031381_1031879_-	GAF domain-containing protein	NA	NA	NA	NA
WP_002992609.1\|1032023_1032833_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

1046844 : 1136147

Streptococcus_phage(61.19%)

portal,terminase,protease,transposase,integrase,tail,capsid,holin,head,tRNA

attL 1089255:1089274|attR 1133520:1133539

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002995750.1\|1046844_1047540_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002995753.1\|1047558_1048320_-	DUF3169 family protein	NA	NA	NA	NA
WP_002989220.1\|1048316_1048532_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038432382.1\|1048892_1051511_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.1e-61	34.1
WP_000564846.1\|1051992_1053126_-\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_020837342.1\|1053223_1054279_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_020837344.1\|1054341_1055049_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.6e-08	27.2
WP_002995765.1\|1055114_1056311_-	OFA family MFS transporter	NA	NA	NA	NA
WP_020837346.1\|1056686_1058492_-	oligoendopeptidase F	NA	NA	NA	NA
WP_002983995.1\|1058504_1059467_-	competence protein CoiA	NA	NA	NA	NA
WP_002995774.1\|1059762_1060479_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002995779.1\|1060597_1061302_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_002995782.1\|1061503_1062532_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002983986.1\|1062538_1063759_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_002995785.1\|1063872_1064463_-	serine hydrolase	NA	NA	NA	NA
WP_002983979.1\|1064687_1064921_-	hypothetical protein	NA	NA	NA	NA
WP_002983977.1\|1065087_1065693_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
WP_011054659.1\|1065789_1066830_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_023610110.1\|1066900_1069144_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
WP_002983967.1\|1069124_1069787_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_002989170.1\|1069986_1070727_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_011284941.1\|1070766_1071621_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_011017953.1\|1071610_1071889_+	GIY-YIG nuclease family protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
WP_038432386.1\|1071912_1073913_-	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	3.8e-65	33.8
WP_023610131.1\|1074039_1075659_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
WP_038432388.1\|1075965_1077510_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	4.8e-36	29.3
WP_002983946.1\|1077747_1078443_-	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_010922441.1\|1078522_1079914_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_023610118.1\|1080104_1081151_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002983939.1\|1081251_1081848_-	recombination protein RecR	NA	NA	NA	NA
WP_014635570.1\|1082646_1083426_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_002989140.1\|1083549_1084092_-	hypothetical protein	NA	NA	NA	NA
WP_002983930.1\|1084252_1084774_-	transcription repressor NadR	NA	NA	NA	NA
WP_002983928.1\|1084881_1085577_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_021299339.1\|1085815_1086751_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	4.6e-66	45.1
WP_020837373.1\|1087050_1088913_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	5.4e-90	33.8
1089255:1089274	attL	NA	NA	NA	NA
WP_011017964.1\|1089443_1089626_-	hypothetical protein	A3F673	Streptococcus_phage	1.4e-19	76.7
WP_011054727.1\|1089971_1090547_-	hypothetical protein	Q938J0	Temperate_phage	1.7e-111	100.0
WP_038432391.1\|1091022_1091802_-	streptococcal pyrogenic exotoxin SpeK	Q938J1	Temperate_phage	1.6e-144	99.6
WP_011054729.1\|1092105_1092972_-	DUF334 domain-containing protein	Q938J2	Temperate_phage	3.7e-134	100.0
WP_011017840.1\|1092959_1093484_-	DUF4065 domain-containing protein	Q938J3	Temperate_phage	4.0e-99	100.0
WP_014411848.1\|1093623_1094832_-	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	8.6e-214	86.8
WP_003058873.1\|1094947_1095175_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_002987582.1\|1095171_1095447_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_023610893.1\|1095456_1096095_-	hypothetical protein	A3F662	Streptococcus_phage	1.2e-44	53.7
WP_014411850.1\|1096097_1096526_-	DUF1617 family protein	A3F661	Streptococcus_phage	1.7e-63	86.5
WP_014411851.1\|1096537_1098424_-	gp58-like family protein	Q938J9	Temperate_phage	1.3e-203	86.5
WP_014411852.1\|1098436_1099459_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.2e-168	91.7
WP_014411853.1\|1099455_1101600_-\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	93.3
WP_014411854.1\|1101596_1102304_-\|tail	phage tail family protein	Q938K2	Temperate_phage	1.7e-92	71.1
WP_014411855.1\|1102303_1106227_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.9e-238	48.7
WP_014411856.1\|1106239_1106407_-	hypothetical protein	J7KBS0	Streptococcus_phage	2.9e-19	87.3
WP_014411857.1\|1106436_1106763_-	hypothetical protein	J7KK85	Streptococcus_phage	6.0e-37	73.1
WP_014411858.1\|1106815_1107424_-\|tail	phage major tail protein	J7KKC8	Streptococcus_phage	2.3e-74	70.5
WP_002985347.1\|1107440_1107866_-	hypothetical protein	J7KBZ9	Streptococcus_phage	5.0e-68	85.1
WP_002985349.1\|1107862_1108240_-	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.4e-45	72.8
WP_002985351.1\|1108236_1108584_-\|head	phage head closure protein	J7KJ42	Streptococcus_phage	1.5e-49	85.5
WP_014411860.1\|1108580_1108883_-\|head,tail	phage head-tail connector protein	J7KC36	Streptococcus_phage	6.1e-44	87.0
WP_023610896.1\|1108885_1109032_-	hypothetical protein	J7KH04	Streptococcus_phage	4.0e-09	77.5
WP_014411862.1\|1109018_1110221_-\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	6.0e-135	64.4
WP_023610933.1\|1110246_1110912_-\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	4.6e-92	77.7
WP_014411863.1\|1110889_1112110_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	2.0e-186	81.7
WP_002985363.1\|1112143_1112368_-	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
WP_002985365.1\|1112360_1112531_-	hypothetical protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
WP_014411864.1\|1112527_1114282_-\|terminase	terminase large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
WP_002985371.1\|1114296_1114764_-\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
WP_002985375.1\|1114934_1115273_-	HNH endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
WP_014411867.1\|1115857_1116298_-	ArpU family transcriptional regulator	Q938L8	Temperate_phage	1.9e-78	99.3
WP_014411868.1\|1116573_1116945_-	hypothetical protein	NA	NA	NA	NA
WP_014411869.1\|1116941_1117652_-	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.0e-25	46.2
WP_011018133.1\|1117654_1118287_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.3e-85	68.6
WP_014411870.1\|1118288_1118573_-	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
WP_014411871.1\|1118569_1118974_-	hypothetical protein	A3F627	Streptococcus_phage	1.6e-39	65.2
WP_002987593.1\|1118983_1119253_-	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_014411872.1\|1119249_1119534_-	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	2.2e-48	96.8
WP_011054576.1\|1120105_1120426_-	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	7.1e-51	94.3
WP_008087509.1\|1120422_1120836_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.8e-15	50.0
WP_014411876.1\|1121097_1122573_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.9e-248	86.7
WP_014411877.1\|1122562_1123375_-	bifunctional DNA primase/polymerase	A0A1P8VVM6	Streptococcus_phage	1.3e-152	97.4
WP_011054580.1\|1123377_1123836_-	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	5.0e-82	99.3
WP_011528546.1\|1123851_1125081_-	DEAD/DEAH box helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
WP_002995975.1\|1125182_1125863_-	AAA family ATPase	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
WP_011054820.1\|1125863_1126346_-	siphovirus Gp157 family protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
WP_014411879.1\|1126493_1126808_-	helix-turn-helix transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	1.3e-49	94.2
WP_014411880.1\|1126959_1127271_-	hypothetical protein	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
WP_011054585.1\|1127348_1127534_-	helix-turn-helix transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
WP_011284879.1\|1127700_1127940_+	hypothetical protein	NA	NA	NA	NA
WP_002984292.1\|1128090_1128300_+	hypothetical protein	NA	NA	NA	NA
WP_011285629.1\|1128552_1129359_+	TIGR02391 family protein	A0A1S5SBU1	Streptococcus_phage	7.9e-123	82.1
WP_014411882.1\|1129570_1129810_-	helix-turn-helix transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	1.4e-35	98.7
WP_011284882.1\|1129903_1130503_+	hypothetical protein	A0A097PAT4	Streptococcus_pyogenes_phage	3.1e-108	100.0
WP_011285583.1\|1130532_1130691_-	hypothetical protein	A0A097PAP2	Streptococcus_pyogenes_phage	4.8e-24	100.0
WP_014411883.1\|1131063_1131852_+	phage repressor protein	A0A1S5SD15	Streptococcus_phage	2.0e-86	63.0
WP_011106738.1\|1131861_1132167_+	membrane protein	NA	NA	NA	NA
WP_003051793.1\|1132289_1133432_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
WP_002983920.1\|1133521_1133797_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.6e-25	73.0
1133520:1133539	attR	NA	NA	NA	NA
WP_002989129.1\|1133895_1134483_-	YpmS family protein	NA	NA	NA	NA
WP_002992620.1\|1134460_1135303_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002983913.1\|1135295_1136147_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.4e-13	35.7

DBSCAN-SWA_7

1255874 : 1334982

Streptococcus_phage(72.58%)

portal,terminase,protease,integrase,tail,holin,bacteriocin,capsid,tRNA

attL 1272728:1272743|attR 1318860:1318875

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012560856.1\|1255874_1256810_-\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	6.0e-05	38.5
WP_038432426.1\|1256871_1259256_-	primosomal protein N'	NA	NA	NA	NA
WP_002983650.1\|1259320_1259638_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_002983649.1\|1259653_1260289_-	guanylate kinase	S4VT50	Pandoravirus	4.9e-11	45.3
WP_002988954.1\|1260398_1262006_-	ribonuclease Y	NA	NA	NA	NA
WP_004230527.1\|1262135_1263032_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	2.1e-07	21.9
WP_002992509.1\|1263226_1264414_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_051904302.1\|1264437_1265088_+	CoA transferase subunit A	NA	NA	NA	NA
WP_014635622.1\|1265089_1265749_+	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA
WP_002983637.1\|1265781_1266561_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_038432429.1\|1266631_1267963_+	GntP family permease	NA	NA	NA	NA
WP_002988938.1\|1268036_1268519_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_038432430.1\|1268663_1270133_-	hypothetical protein	NA	NA	NA	NA
WP_011888664.1\|1270146_1271301_-	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_002983626.1\|1271745_1272072_-	cell division regulator GpsB	NA	NA	NA	NA
WP_011285056.1\|1272193_1272709_-	DUF1273 domain-containing protein	NA	NA	NA	NA
1272728:1272743	attL	NA	NA	NA	NA
WP_002983622.1\|1272789_1273398_+	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	3.2e-23	33.9
WP_023609908.1\|1273384_1275550_+	penicillin-binding protein	NA	NA	NA	NA
WP_011017399.1\|1275793_1275976_-	hypothetical protein	J7KBZ4	Streptococcus_phage	1.9e-16	74.6
WP_009880239.1\|1276196_1276952_+	streptococcal pyrogenic exotoxin SpeA	A0A097PAT7	Streptococcus_pyogenes_phage	2.2e-143	100.0
WP_023611377.1\|1277073_1278291_-	glucosaminidase domain-containing protein	A0A1P8VVM5	Streptococcus_phage	2.6e-162	59.5
WP_003058873.1\|1278409_1278637_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_011017397.1\|1278633_1278906_-	hypothetical protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
WP_023611372.1\|1278917_1279550_-	hypothetical protein	Q938J7	Temperate_phage	2.6e-44	50.0
WP_002988448.1\|1279552_1279981_-	DUF1617 family protein	Q938J8	Temperate_phage	8.1e-58	84.3
WP_011017395.1\|1279992_1281897_-	gp58-like family protein	Q938J9	Temperate_phage	1.1e-210	83.7
WP_011017394.1\|1281906_1282914_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	9.9e-115	64.9
WP_038432431.1\|1282910_1284962_-\|tail	phage tail protein	A3F656	Streptococcus_phage	0.0e+00	84.6
WP_011017392.1\|1284958_1285729_-\|tail	phage tail family protein	A3F655	Streptococcus_phage	2.1e-128	87.5
WP_023611657.1\|1285741_1289842_-\|tail	phage tail tape measure protein	A3F654	Streptococcus_phage	0.0e+00	66.3
WP_011017390.1\|1290067_1290370_-	hypothetical protein	A3F652	Streptococcus_phage	1.8e-48	96.0
WP_011017389.1\|1290462_1291047_-\|tail	tail protein	A3F651	Streptococcus_phage	3.1e-92	90.2
WP_011017388.1\|1291058_1291439_-	hypothetical protein	A3F650	Streptococcus_phage	7.4e-63	99.2
WP_011017387.1\|1291431_1291830_-	HK97 gp10 family phage protein	A3F649	Streptococcus_phage	2.9e-70	100.0
WP_011017386.1\|1291831_1292194_-	hypothetical protein	A3F648	Streptococcus_phage	1.1e-60	97.5
WP_011017385.1\|1292186_1292495_-	hypothetical protein	A3F647	Streptococcus_phage	1.2e-47	99.0
WP_011017384.1\|1292494_1292668_-	hypothetical protein	A3F646	Streptococcus_phage	6.4e-22	94.7
WP_011017383.1\|1292681_1293815_-\|capsid	phage major capsid protein	A3F645	Streptococcus_phage	3.2e-202	96.8
WP_023611660.1\|1293831_1294638_-\|protease	Clp protease ClpP	A3F644	Streptococcus_phage	6.0e-147	97.8
WP_011017381.1\|1294618_1295806_-\|portal	phage portal protein	A3F643	Streptococcus_phage	5.6e-218	96.2
WP_038432433.1\|1295958_1296183_-	hypothetical protein	A3F642	Streptococcus_phage	7.7e-36	95.9
WP_011017380.1\|1296173_1297904_-\|terminase	terminase large subunit	A3F641	Streptococcus_phage	0.0e+00	97.0
WP_011017379.1\|1297916_1298234_-\|terminase	P27 family phage terminase small subunit	A3F640	Streptococcus_phage	3.9e-49	99.0
WP_011054436.1\|1298374_1298647_-	HNH endonuclease	A3F639	Streptococcus_phage	4.8e-48	95.6
WP_011017377.1\|1298672_1299059_-	hypothetical protein	A3F638	Streptococcus_phage	1.4e-64	93.0
WP_011017376.1\|1299084_1299288_-	hypothetical protein	NA	NA	NA	NA
WP_011017375.1\|1299345_1299639_-	hypothetical protein	NA	NA	NA	NA
WP_011054435.1\|1299792_1300368_-\|integrase	site-specific integrase	A3F636	Streptococcus_phage	7.4e-107	99.5
WP_011017373.1\|1300527_1300929_-	hypothetical protein	A3F635	Streptococcus_phage	2.7e-71	100.0
WP_011017372.1\|1300943_1301771_-	prohibitin family protein	A3F634	Streptococcus_phage	1.3e-117	100.0
WP_011017371.1\|1301773_1302112_-	helix-turn-helix transcriptional regulator	A3F633	Streptococcus_phage	1.1e-54	92.9
WP_011054431.1\|1302108_1302390_-	hypothetical protein	A3F632	Streptococcus_phage	4.5e-33	92.2
WP_011017370.1\|1302404_1302797_-	single-stranded DNA-binding protein	A0A1P8VVS8	Streptococcus_phage	6.9e-48	70.3
WP_011017369.1\|1302793_1303015_-	hypothetical protein	NA	NA	NA	NA
WP_011017368.1\|1303011_1303497_-	DUF1642 domain-containing protein	A0A1S5S9L5	Streptococcus_phage	5.6e-23	41.4
WP_023611652.1\|1303501_1304134_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	5.9e-81	65.7
WP_011017366.1\|1304135_1304405_-	hypothetical protein	A7J287	Streptococcus_phage	1.4e-28	80.9
WP_023611649.1\|1304401_1304572_-	hypothetical protein	Q938M0	Temperate_phage	2.7e-09	55.4
WP_011017365.1\|1304568_1305012_-	hypothetical protein	A0A1C9LX52	Streptococcus_phage	1.6e-32	55.0
WP_032467212.1\|1305167_1305395_-	hypothetical protein	C5J991	Streptococcus_phage	9.3e-13	49.3
WP_023611651.1\|1305394_1306207_-	ATP-binding protein	A0A1P8VVV9	Streptococcus_phage	6.8e-122	77.6
WP_011017361.1\|1306206_1306968_-	conserved phage C-terminal domain-containing protein	A0A220GFI5	Streptococcus_phage	9.1e-28	56.1
WP_011106800.1\|1306960_1308316_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	9.3e-209	84.7
WP_032461348.1\|1308287_1308476_-	hypothetical protein	NA	NA	NA	NA
WP_038432436.1\|1308596_1308788_-	hypothetical protein	NA	NA	NA	NA
WP_011054421.1\|1308880_1309138_-	hypothetical protein	A3F618	Streptococcus_phage	5.4e-41	98.8
WP_011017357.1\|1309211_1309931_-	ORF6C domain-containing protein	A3F617	Streptococcus_phage	4.6e-106	78.7
WP_032464978.1\|1309982_1310483_+	hypothetical protein	NA	NA	NA	NA
WP_011054420.1\|1310810_1311023_-	helix-turn-helix transcriptional regulator	M1Q1B4	Streptococcus_phage	1.7e-13	52.9
WP_011017354.1\|1311057_1311333_-	hypothetical protein	NA	NA	NA	NA
WP_011017353.1\|1311621_1311972_+	helix-turn-helix transcriptional regulator	A0A1S5SAD3	Streptococcus_phage	1.2e-35	63.5
WP_011017352.1\|1311975_1312368_+	hypothetical protein	A3F612	Streptococcus_phage	2.2e-38	68.7
WP_011017351.1\|1312378_1313119_+	type II toxin-antitoxin system PemK/MazF family toxin	A3F611	Streptococcus_phage	1.6e-130	100.0
WP_011017350.1\|1313429_1314626_+\|integrase	site-specific integrase	A3F610	Streptococcus_phage	3.9e-227	99.0
WP_002983616.1\|1315028_1316366_-	aminopeptidase C	R4TV59	Phaeocystis_globosa_virus	1.4e-68	37.0
WP_003055492.1\|1316550_1317375_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	5.3e-74	58.2
WP_038432439.1\|1317376_1318831_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	7.2e-98	41.8
WP_002988920.1\|1319001_1320381_-	amino acid permease	NA	NA	NA	NA
1318860:1318875	attR	NA	NA	NA	NA
WP_023079248.1\|1320549_1321467_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	6.3e-92	53.2
WP_002988906.1\|1321530_1321755_-	DUF4059 family protein	NA	NA	NA	NA
WP_002983603.1\|1321858_1322602_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-28	39.6
WP_002988904.1\|1322601_1323405_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_011018073.1\|1323599_1324943_-	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	1.4e-42	28.4
WP_002988900.1\|1325100_1326111_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_002988898.1\|1326112_1328368_-	penicillin-binding protein	NA	NA	NA	NA
WP_002988895.1\|1328371_1328695_-	cell division protein FtsL	NA	NA	NA	NA
WP_002983586.1\|1328699_1329713_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_164976348.1\|1329941_1330166_-	hypothetical protein	NA	NA	NA	NA
WP_011054854.1\|1330185_1331436_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.2e-116	55.6
WP_011054855.1\|1331428_1332250_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.7e-38	36.8
WP_023609905.1\|1332314_1333943_-	membrane protein	NA	NA	NA	NA
WP_002988881.1\|1333947_1334682_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.3e-27	28.1
WP_002988878.1\|1334715_1334982_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_8

1488792 : 1540633

Streptococcus_phage(30.65%)

portal,terminase,integrase,tail,capsid,holin,head

attL 1494909:1494924|attR 1545169:1545184

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002988207.1\|1488792_1489167_+	helix-turn-helix transcriptional regulator	A0A097BY95	Leuconostoc_phage	2.7e-17	51.6
WP_038432505.1\|1489511_1489691_-	hypothetical protein	A3F673	Streptococcus_phage	6.4e-17	75.9
WP_011285611.1\|1489928_1490729_+	streptodornase Sda3	NA	NA	NA	NA
WP_011888701.1\|1491484_1492351_-	DUF334 domain-containing protein	Q938J2	Temperate_phage	1.1e-133	99.7
WP_012560947.1\|1492338_1492863_-	DUF4065 domain-containing protein	Q938J3	Temperate_phage	1.2e-98	99.4
WP_012560948.1\|1493002_1494211_-	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	1.5e-210	85.6
WP_011017843.1\|1494326_1494554_-\|holin	phage holin	A7J2B3	Streptococcus_phage	7.6e-31	98.7
WP_002987582.1\|1494550_1494826_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_012560949.1\|1494835_1495453_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	1.0e-74	86.3
1494909:1494924	attL	NA	NA	NA	NA
WP_002987333.1\|1495455_1495617_-	hypothetical protein	NA	NA	NA	NA
WP_038432507.1\|1495630_1497541_-	gp58-like family protein	Q938J9	Temperate_phage	2.5e-119	71.0
WP_012560951.1\|1497556_1498561_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.9e-102	60.3
WP_012560952.1\|1498557_1500609_-\|tail	phage tail protein	A3F656	Streptococcus_phage	0.0e+00	85.2
WP_011184914.1\|1500605_1501385_-\|tail	phage tail family protein	A3F655	Streptococcus_phage	1.7e-66	54.8
WP_012560953.1\|1501417_1505053_-	tape measure protein	U6E979	Streptococcus_phage	4.0e-04	28.0
WP_002988428.1\|1505067_1505397_-	hypothetical protein	A0A1P8BLR3	Lactococcus_phage	5.7e-11	40.6
WP_002990023.1\|1505438_1505792_-	hypothetical protein	Q77RZ7	Lactococcus_phage	5.5e-20	48.6
WP_038432972.1\|1505844_1506453_-\|tail	phage major tail protein, TP901-1 family	D7RWD5	Brochothrix_phage	5.2e-42	52.2
WP_014635506.1\|1506507_1506897_-	hypothetical protein	Q8LTQ5	Lactococcus_phage	2.2e-46	69.8
WP_038432514.1\|1506893_1507259_-	HK97 gp10 family phage protein	A0A097BY98	Enterococcus_phage	3.1e-18	47.9
WP_002984393.1\|1507239_1507548_-	hypothetical protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
WP_002984392.1\|1507544_1507898_-\|head,tail	phage head-tail connector protein	A0A2H4J002	uncultured_Caudovirales_phage	9.7e-25	49.6
WP_002984390.1\|1507911_1508154_-	hypothetical protein	NA	NA	NA	NA
WP_014635509.1\|1508163_1509240_-\|capsid	major capsid protein	A0A2H4J022	uncultured_Caudovirales_phage	5.5e-103	56.0
WP_014635510.1\|1509239_1509620_-	hypothetical protein	A0A0K2CNR0	Brevibacillus_phage	4.1e-05	33.3
WP_014635511.1\|1509629_1510163_-	DUF4355 domain-containing protein	A0A141E0S7	Streptococcus_phage	1.2e-15	84.2
WP_032462876.1\|1510306_1510573_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	6.6e-26	71.6
WP_011284859.1\|1510575_1510890_-	hypothetical protein	M1PLI3	Streptococcus_phage	6.8e-38	72.8
WP_002988389.1\|1510959_1511145_-	hypothetical protein	NA	NA	NA	NA
WP_038432517.1\|1511148_1512711_-\|head	phage head morphogenesis protein	U6E9F1	Streptococcus_phage	3.3e-48	44.2
WP_002984369.1\|1512691_1514194_-\|portal	phage portal protein	C9W9H5	Streptococcus_virus	1.9e-141	54.5
WP_012560959.1\|1514205_1515495_-\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	1.7e-183	74.9
WP_002990047.1\|1515472_1515955_-\|terminase	terminase small subunit	E0Y3R8	Staphylococcus_virus	3.3e-15	40.3
WP_011017866.1\|1516786_1517227_-	ArpU family transcriptional regulator	Q938L8	Temperate_phage	5.0e-79	100.0
WP_012560960.1\|1517666_1518188_-	DUF1642 domain-containing protein	Q938L9	Temperate_phage	5.6e-69	76.3
WP_012560961.1\|1518184_1518478_-	hypothetical protein	A0A097PAR1	Streptococcus_pyogenes_phage	8.0e-49	97.9
WP_011054812.1\|1518474_1518660_-	hypothetical protein	A0A097PBF0	Streptococcus_pyogenes_phage	7.0e-27	100.0
WP_012560962.1\|1518757_1519243_-	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	3.6e-94	99.4
WP_038432520.1\|1519246_1519531_-	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.0e-40	91.5
WP_012560963.1\|1519527_1519932_-	hypothetical protein	Q938M1	Temperate_phage	3.4e-66	94.0
WP_023078268.1\|1519915_1520203_-	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	5.1e-32	75.0
WP_012560965.1\|1520444_1520801_-	hypothetical protein	A0A097PAU4	Streptococcus_pyogenes_phage	5.5e-60	98.3
WP_011285574.1\|1520797_1521238_-	RusA family crossover junction endodeoxyribonuclease	A0A097PAS0	Streptococcus_pyogenes_phage	4.5e-80	97.9
WP_011106686.1\|1521237_1521441_-	hypothetical protein	Q938M6	Temperate_phage	4.7e-32	100.0
WP_011285575.1\|1521446_1521872_-	single-stranded DNA-binding protein	A0A097PAQ3	Streptococcus_pyogenes_phage	2.8e-55	82.3
WP_012560968.1\|1521864_1522539_-	ERF family protein	A0A097PBE8	Streptococcus_pyogenes_phage	7.6e-119	99.1
WP_011018142.1\|1522539_1523022_-	siphovirus Gp157 family protein	Q938M9	Temperate_phage	8.2e-51	100.0
WP_012560970.1\|1523043_1523298_-	hypothetical protein	Q938N0	Temperate_phage	1.8e-41	96.4
WP_012560971.1\|1523284_1523632_-	hypothetical protein	A0A097PAU3	Streptococcus_pyogenes_phage	4.6e-11	47.7
WP_021341158.1\|1523772_1524555_-	ATP-binding protein	A0A097PAQ0	Streptococcus_pyogenes_phage	2.7e-144	98.1
WP_021340639.1\|1524541_1525345_-	DnaD domain protein	A0A2P0VI76	Streptococcus_phage	2.4e-63	53.8
WP_012560973.1\|1525460_1525904_-	hypothetical protein	NA	NA	NA	NA
WP_000568478.1\|1525959_1526340_+	hypothetical protein	NA	NA	NA	NA
WP_000370473.1\|1526329_1526602_-	hypothetical protein	NA	NA	NA	NA
WP_012560974.1\|1526774_1526954_-	hypothetical protein	A0A1X9I5M8	Streptococcus_phage	1.2e-12	65.5
WP_012560976.1\|1527500_1527860_-	hypothetical protein	Q9AZZ9	Lactococcus_phage	2.2e-08	50.0
WP_012560977.1\|1527933_1528191_-	hypothetical protein	X2KPF2	Streptococcus_phage	3.3e-06	36.8
WP_038432527.1\|1528393_1528735_-	hypothetical protein	NA	NA	NA	NA
WP_002988329.1\|1528809_1529010_+	KTSC domain-containing protein	A0A1S5S8T9	Streptococcus_phage	3.3e-22	75.4
WP_002988326.1\|1529006_1529156_-	hypothetical protein	Q938N4	Temperate_phage	2.3e-20	98.0
WP_002988323.1\|1529187_1529916_-	phage antirepressor KilAC domain-containing protein	Q938N5	Temperate_phage	9.7e-112	81.8
WP_002988320.1\|1529948_1530137_-	helix-turn-helix transcriptional regulator	A0A0B5A7F0	Streptococcus_phage	1.8e-14	65.6
WP_038432530.1\|1530197_1530611_+	hypothetical protein	NA	NA	NA	NA
WP_019418745.1\|1530612_1530771_-	hypothetical protein	NA	NA	NA	NA
WP_002988317.1\|1530783_1531545_-	phage repressor protein/antirepressor Ant	Q6SEF4	Lactobacillus_prophage	3.3e-86	63.2
WP_002988313.1\|1531711_1531984_+	hypothetical protein	NA	NA	NA	NA
WP_002988309.1\|1531972_1532173_-	hypothetical protein	NA	NA	NA	NA
WP_000164463.1\|1532208_1532424_-	helix-turn-helix transcriptional regulator	J7KK54	Streptococcus_phage	5.0e-32	98.6
WP_002988305.1\|1532497_1532725_+	hypothetical protein	NA	NA	NA	NA
WP_002988299.1\|1532841_1533621_+	hypothetical protein	A0A1S5S7L0	Streptococcus_phage	6.2e-48	57.4
WP_002988291.1\|1533754_1533913_-	hypothetical protein	J7KH24	Streptococcus_phage	1.7e-21	92.3
WP_002988288.1\|1534276_1535035_+	helix-turn-helix transcriptional regulator	J7KJ52	Streptococcus_phage	1.2e-120	88.0
WP_002988284.1\|1535107_1535530_+	Ltp family lipoprotein	NA	NA	NA	NA
WP_038432536.1\|1535650_1536787_+\|integrase	site-specific integrase	A0A1B1IMP1	Lactococcus_phage	1.3e-57	35.6
WP_002988205.1\|1536846_1537146_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_002992265.1\|1537202_1537940_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014635690.1\|1538091_1538679_-	3'-5' exonuclease	A0A0A8WJ41	Clostridium_phage	9.2e-12	28.9
WP_014635691.1\|1538727_1539258_-	DUF536 domain-containing protein	NA	NA	NA	NA
WP_023609903.1\|1539463_1540633_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	5.5e-16	53.0
1545169:1545184	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1763594 : 1783062

Streptococcus_phage(64.71%)

integrase,holin

attL 1766793:1766813|attR 1780363:1780383

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002992187.1\|1763594_1764815_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	3.5e-05	23.6
WP_002992189.1\|1764825_1766808_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.3e-62	30.1
1766793:1766813	attL	NA	NA	NA	NA
WP_003058754.1\|1766902_1768054_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	3.6e-84	44.9
WP_011185066.1\|1768302_1768446_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_003058809.1\|1769294_1770062_-	helix-turn-helix domain-containing protein	Q76TK4	Streptococcus_pyogenes_phage	3.6e-72	83.1
WP_002992503.1\|1770215_1770422_+	helix-turn-helix transcriptional regulator	X2KUC2	Streptococcus_phage	2.4e-07	47.0
WP_002992502.1\|1770455_1770656_+	helix-turn-helix transcriptional regulator	A0A1S5SE31	Streptococcus_phage	3.4e-11	56.7
WP_002992501.1\|1770676_1771084_+	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	1.3e-49	69.4
WP_011185071.1\|1771495_1772023_+	Rha family transcriptional regulator	R9QNB1	Lactococcus_phage	9.7e-21	40.2
WP_002992497.1\|1772267_1772600_+	hypothetical protein	NA	NA	NA	NA
WP_027968868.1\|1772599_1772791_+	hypothetical protein	NA	NA	NA	NA
WP_000206026.1\|1772803_1773166_+	hypothetical protein	NA	NA	NA	NA
WP_000174505.1\|1773162_1773492_+	hypothetical protein	NA	NA	NA	NA
WP_001100459.1\|1773494_1773767_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
WP_011185073.1\|1773767_1774625_+	primase C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	9.0e-125	74.8
WP_038432681.1\|1774593_1776282_+	DNA primase	A0A1X9I717	Streptococcus_phage	1.2e-258	82.0
WP_000694577.1\|1776568_1776742_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
WP_011185075.1\|1776747_1776921_+	hypothetical protein	NA	NA	NA	NA
WP_011185076.1\|1776922_1777432_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	4.2e-29	62.5
WP_002992480.1\|1777506_1777995_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.4e-45	54.9
WP_002992136.1\|1778398_1778761_+	DUF1492 domain-containing protein	A0A2H4JFS1	uncultured_Caudovirales_phage	8.7e-05	29.9
WP_011185077.1\|1778735_1779119_+	ArpU family transcriptional regulator	A0A286QPF1	Streptococcus_phage	1.1e-08	35.5
WP_011185078.1\|1779319_1779925_+	hypothetical protein	NA	NA	NA	NA
WP_002993100.1\|1780506_1783062_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	5.2e-43	23.3
1780363:1780383	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LS483332

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection