CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483334	Streptococcus pyogenes strain NCTC12050 chromosome 1	1 crisprs	DEDDh,cas3,RT,csm6,DinG,csa3	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483334_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483334_1

787542-787642

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483334_1

>merge|NZ_LS483334|1|787542-787642|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGGTATAATTAGACTATACCAATTAT

>NZ_LS483334|1|1|787542-787642|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATAATGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483334.1\|WP_002992415.1\|790796_791426_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_LS483334.1\|WP_012560755.1\|795145_796468_-\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_LS483334.1\|WP_111676310.1\|787693_789508_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_LS483334.1\|WP_002984447.1\|785240_786743_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_LS483334.1\|WP_111676306.1\|778180_778795_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_LS483334.1\|WP_111676312.1\|790145_790787_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_LS483334.1\|WP_053308385.1\|778925_779711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483334.1\|WP_111676308.1\|780974_784085_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
NZ_LS483334.1\|WP_002984437.1\|779720_780419_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LS483334.1\|WP_002984444.1\|784164_785178_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_LS483334.1\|WP_111676314.1\|793790_795026_-\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_LS483334.1\|WP_002992581.1\|774298_776563_+\|glycogen/starch/alpha-glucan-family-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_LS483334.1\|WP_002989626.1\|789703_790039_+\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_LS483334.1\|WP_002992413.1\|791441_792278_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NZ_LS483334.1\|WP_111676316.1\|796996_799315_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_LS483334.1\|WP_009880829.1\|792647_793421_+\|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl\|CDD\|369335
NZ_LS483334.1\|WP_053308395.1\|776819_777440_-\|DUF3862-domain-containing-protein	unknown	unknown	gnl\|CDD\|289729
NZ_LS483334.1\|WP_002989617.1\|780418_780790_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_LS483334.1\|WP_002984469.1\|799678_799927_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LS483334.1\|WP_002984449.1\|786960_787518_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044

Protein	Function_ID	Function_description	E-value
NZ_LS483334.1\|WP_002992415.1\|790796_791426_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.61041e-111
NZ_LS483334.1\|WP_012560755.1\|795145_796468_-\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_LS483334.1\|WP_111676310.1\|787693_789508_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_LS483334.1\|WP_002984447.1\|785240_786743_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_LS483334.1\|WP_111676306.1\|778180_778795_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.7865e-31
NZ_LS483334.1\|WP_111676312.1\|790145_790787_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.45713e-69
NZ_LS483334.1\|WP_111676308.1\|780974_784085_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_LS483334.1\|WP_002984437.1\|779720_780419_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
NZ_LS483334.1\|WP_002984444.1\|784164_785178_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_LS483334.1\|WP_111676314.1\|793790_795026_-\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.08256e-95
NZ_LS483334.1\|WP_002992581.1\|774298_776563_+\|glycogen/starch/alpha-glucan-family-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_LS483334.1\|WP_002989626.1\|789703_790039_+\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
NZ_LS483334.1\|WP_002992413.1\|791441_792278_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.07683e-110
NZ_LS483334.1\|WP_111676316.1\|796996_799315_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483334.1\|WP_009880829.1\|792647_793421_+\|CAMP-factor-pore-forming-toxin-Cfa	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.06073e-97
NZ_LS483334.1\|WP_053308395.1\|776819_777440_-\|DUF3862-domain-containing-protein	gnl\|CDD\|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	4.02943e-86
NZ_LS483334.1\|WP_002989617.1\|780418_780790_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
NZ_LS483334.1\|WP_002984469.1\|799678_799927_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NZ_LS483334.1\|WP_002984449.1\|786960_787518_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38

>NZ_LS483334.1|WP_002984449.1|786960_787518_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NZ_LS483334.1|WP_002984447.1|785240_786743_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NZ_LS483334.1|WP_002984444.1|784164_785178_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NZ_LS483334.1|WP_111676308.1|780974_784085_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHRLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSVTEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NZ_LS483334.1|WP_002989617.1|780418_780790_-|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NZ_LS483334.1|WP_002984437.1|779720_780419_-|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NZ_LS483334.1|WP_053308385.1|778925_779711_-|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINILTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHNHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NZ_LS483334.1|WP_111676306.1|778180_778795_+|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVIFWFLQH
>NZ_LS483334.1|WP_053308395.1|776819_777440_-|DUF3862-domain-containing-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQAAHQDKRANFEKIKLATVDSSFTGGTSLEELTSLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>NZ_LS483334.1|WP_002992581.1|774298_776563_+|glycogen/starch/alpha-glucan-family-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSISSLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDDSWLVPTDISYDVPFKNFTLKSRLDRIDVLGYRRDTKNYLNLFDIEGVDYGLIKDGISFDKTQIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMAFADDKAVHAKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEERLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR
>NZ_LS483334.1|WP_111676310.1|787693_789508_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMIIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NZ_LS483334.1|WP_002989626.1|789703_790039_+|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NZ_LS483334.1|WP_111676312.1|790145_790787_+|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLTSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NZ_LS483334.1|WP_002992415.1|790796_791426_+|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKSDAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NZ_LS483334.1|WP_002992413.1|791441_792278_+|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKGLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQEKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>NZ_LS483334.1|WP_009880829.1|792647_793421_+|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NZ_LS483334.1|WP_111676314.1|793790_795026_-|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLSLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVSVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQRTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>NZ_LS483334.1|WP_012560755.1|795145_796468_-|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NZ_LS483334.1|WP_111676316.1|796996_799315_+|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQTEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLNEISEELLSYQGLARPAQSSFGVRFSTDKHTQFGQGMSLSEALQARKAQAQVRQSPQPTQARTISSASTTSGLPFGSNRSLEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NZ_LS483334.1|WP_002984469.1|799678_799927_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36529 : 48842

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032467026.1\|36529_40255_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.8e-40	27.0
WP_111676024.1\|40415_41870_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.5
WP_111676026.1\|41897_42920_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.4e-63	41.8
WP_002986700.1\|43087_43642_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
WP_111676028.1\|43825_45373_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
WP_111676030.1\|45430_46555_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	2.6e-07	28.6
WP_111676032.1\|46807_48073_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_002987716.1\|48350_48842_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.2e-18	42.3

DBSCAN-SWA_2

668674 : 744716

Bacillus_phage(41.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014407658.1\|668674_669484_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_010922414.1\|669628_670126_+	GAF domain-containing protein	NA	NA	NA	NA
WP_002984073.1\|670125_671796_+	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	5.1e-47	40.6
WP_012560785.1\|671891_672095_+	DUF3272 domain-containing protein	NA	NA	NA	NA
WP_002984078.1\|672069_673011_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
WP_111676271.1\|673214_675593_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_002989292.1\|676129_677326_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.5e-138	65.4
WP_002989295.1\|677499_678759_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_111676272.1\|679116_680106_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_032464424.1\|680343_680886_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002989302.1\|680894_682178_+	CBS domain-containing protein	NA	NA	NA	NA
WP_002984100.1\|682193_683054_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_002984102.1\|683055_684021_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_172449895.1\|684131_685415_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_009880588.1\|685407_685899_+	shikimate kinase	NA	NA	NA	NA
WP_011284919.1\|686106_687558_+	LCP family protein	NA	NA	NA	NA
WP_168435457.1\|687639_689271_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	4.3e-253	99.1
WP_109991670.1\|689289_689571_+	hypothetical protein	NA	NA	NA	NA
WP_111676274.1\|689658_690438_+	replication initiator protein A	A0A2P0VK56	Streptococcus_phage	6.5e-13	33.7
WP_109991668.1\|690434_691286_+	ATP-binding protein	H7BWC4	unidentified_phage	4.3e-34	35.5
WP_111676275.1\|691765_693550_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_047926369.1\|693713_694025_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_012679256.1\|694028_694244_+	conjugative transfer protein	NA	NA	NA	NA
WP_109991666.1\|694263_695130_+	hypothetical protein	NA	NA	NA	NA
WP_109991682.1\|695149_695413_+	conjugal transfer protein	NA	NA	NA	NA
WP_109991665.1\|695416_695806_+	PrgI family protein	E4ZFJ8	Streptococcus_phage	8.1e-49	81.5
WP_111676276.1\|695717_698144_+	ATP-binding protein	NA	NA	NA	NA
WP_109991664.1\|698147_700265_+	CHAP domain-containing protein	NA	NA	NA	NA
WP_109991663.1\|700277_700517_+	conjugal transfer protein	NA	NA	NA	NA
WP_111676277.1\|700491_701958_+	DUF4366 domain-containing protein	NA	NA	NA	NA
WP_109991661.1\|703659_705195_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_109991660.1\|712827_714735_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.9e-24	25.6
WP_145959537.1\|715432_716758_+	helicase	NA	NA	NA	NA
WP_109991681.1\|716800_717472_+	DNA-binding protein	NA	NA	NA	NA
WP_109991659.1\|717641_718709_+	AAA family ATPase	NA	NA	NA	NA
WP_111676281.1\|718701_720936_+	S8 family peptidase	NA	NA	NA	NA
WP_109991657.1\|721020_721695_+	DUF4393 domain-containing protein	NA	NA	NA	NA
WP_111676283.1\|726118_727828_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.8e-38	27.3
WP_111676933.1\|729306_730008_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_111676285.1\|730032_730629_+	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_111676287.1\|730887_731298_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_168410084.1\|731780_731948_+	hypothetical protein	NA	NA	NA	NA
WP_111676289.1\|732017_733697_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	7.4e-38	29.4
WP_111676291.1\|734697_735153_+	PaaI family thioesterase	NA	NA	NA	NA
WP_111676293.1\|735106_736591_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_111676295.1\|736964_738185_+	MFS transporter	NA	NA	NA	NA
WP_002984124.1\|738304_738670_-	thioesterase family protein	NA	NA	NA	NA
WP_053308406.1\|738784_739516_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_023611383.1\|739532_739646_-\|transposase	transposase	NA	NA	NA	NA
WP_023080007.1\|739685_739856_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-07	46.3
WP_031577484.1\|739901_740255_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	9.1e-07	36.2
WP_020837336.1\|740287_740581_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_002984130.1\|740658_741969_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
WP_002992869.1\|742192_743065_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_172450033.1\|743364_744716_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.4e-65	49.4

DBSCAN-SWA_3

1014506 : 1070983

Streptococcus_phage(51.85%)

head,capsid,tRNA,terminase,portal,holin,protease,integrase,tail

attL 1013360:1013410|attR 1056631:1056681

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1013360:1013410	attL	NA	NA	NA	NA
WP_047373492.1\|1014506_1015184_-	streptococcal pyrogenic exotoxin SpeI	A0A075M4C7	Staphylococcus_phage	2.4e-27	32.4
WP_011284838.1\|1015457_1016792_-	lysin	Q5MY96	Streptococcus_phage	1.3e-247	93.0
WP_003058873.1\|1016908_1017136_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_011017397.1\|1017132_1017405_-	hypothetical protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
WP_111676423.1\|1017416_1018049_-	hypothetical protein	Q938J7	Temperate_phage	2.9e-43	59.0
WP_002983467.1\|1018051_1018483_-	DUF1617 family protein	Q938J8	Temperate_phage	1.3e-63	89.5
WP_111676425.1\|1018494_1020381_-	gp58-like family protein	Q938J9	Temperate_phage	1.1e-210	84.9
WP_111676427.1\|1020395_1021514_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	4.2e-146	76.6
WP_111676429.1\|1021513_1023655_-\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	93.7
WP_014411854.1\|1023651_1024359_-\|tail	phage tail family protein	Q938K2	Temperate_phage	1.7e-92	71.1
WP_111676431.1\|1024358_1028282_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	7.8e-240	48.9
WP_021299462.1\|1028294_1028444_-	hypothetical protein	J7KBS0	Streptococcus_phage	1.7e-15	85.7
WP_021733367.1\|1028491_1028818_-	hypothetical protein	J7KK85	Streptococcus_phage	6.4e-39	75.0
WP_021341058.1\|1028870_1029482_-\|tail	phage major tail protein	J7KKC8	Streptococcus_phage	1.8e-74	73.0
WP_021341057.1\|1029498_1029924_-	hypothetical protein	J7KBZ9	Streptococcus_phage	2.9e-68	85.8
WP_111676433.1\|1029920_1030298_-	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.3e-46	74.4
WP_029714354.1\|1030294_1030642_-\|head	phage head closure protein	J7KJ42	Streptococcus_phage	2.1e-48	84.5
WP_111676435.1\|1030638_1030941_-\|head,tail	phage head-tail connector protein	J7KC36	Streptococcus_phage	3.3e-42	87.8
WP_111676437.1\|1031085_1032270_-\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	4.4e-162	76.1
WP_109820930.1\|1032294_1032960_-\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	2.1e-92	78.1
WP_111676439.1\|1032937_1034158_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	9.0e-187	81.9
WP_111676441.1\|1034339_1034612_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	8.5e-37	95.4
WP_168388874.1\|1034604_1034775_-	hypothetical protein	J7KK43	Streptococcus_phage	3.9e-08	56.2
WP_111676941.1\|1034771_1036526_-\|terminase	terminase large subunit	J7KKD1	Streptococcus_phage	0.0e+00	98.3
WP_111676442.1\|1036529_1036760_-	hypothetical protein	NA	NA	NA	NA
WP_111676444.1\|1036762_1037230_-\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	1.6e-80	96.1
WP_063632710.1\|1037400_1037739_-	HNH endonuclease	J7KH36	Streptococcus_phage	2.4e-57	97.2
WP_002987622.1\|1037988_1038426_-	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	1.0e-76	99.3
WP_002987471.1\|1038697_1039333_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	5.5e-87	67.9
WP_002987468.1\|1039332_1039734_-	hypothetical protein	NA	NA	NA	NA
WP_023611433.1\|1039924_1040407_-	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.3e-79	82.5
WP_111676446.1\|1040409_1040682_-	hypothetical protein	A7J287	Streptococcus_phage	2.1e-19	61.1
WP_010922069.1\|1040684_1040906_-	hypothetical protein	NA	NA	NA	NA
WP_111676449.1\|1040902_1041298_-	RusA family crossover junction endodeoxyribonuclease	Q5YA86	Bacillus_phage	7.2e-45	65.6
WP_010922067.1\|1041290_1041509_-	hypothetical protein	A0A1S5SEA6	Streptococcus_phage	1.3e-16	64.3
WP_111676451.1\|1041786_1044060_-	AAA family ATPase	Q5YA88	Bacillus_phage	1.5e-280	64.2
WP_010922065.1\|1044049_1044679_-	hypothetical protein	A0A2R4P8H7	Staphylococcus_phage	9.1e-42	43.1
WP_111676453.1\|1044688_1046272_-	DEAD/DEAH box helicase family protein	A0A097BY72	Enterococcus_phage	1.7e-233	77.4
WP_010922063.1\|1046271_1046907_-	hypothetical protein	A0A097BY29	Enterococcus_phage	4.3e-31	46.7
WP_111676455.1\|1046928_1047663_-	hypothetical protein	Q0R597	Streptococcus_phage	6.6e-76	60.9
WP_010922061.1\|1047664_1048087_-	hypothetical protein	M1I9V9	Streptococcus_phage	4.2e-35	59.9
WP_010922060.1\|1048126_1049218_-	ATP-binding protein	A0A0K2CZH1	Paenibacillus_phage	1.0e-96	52.0
WP_063632644.1\|1049232_1050552_-	AAA family ATPase	A0A097BY67	Enterococcus_phage	1.1e-150	63.6
WP_063632643.1\|1050535_1050781_-	hypothetical protein	NA	NA	NA	NA
WP_063632642.1\|1050782_1051001_-	hypothetical protein	NA	NA	NA	NA
WP_111676457.1\|1050981_1051122_-	hypothetical protein	A0A097PAR2	Streptococcus_pyogenes_phage	5.9e-10	82.9
WP_063632641.1\|1051123_1051435_-	hypothetical protein	A1EAC3	Streptococcus_phage	3.8e-49	85.4
WP_011889039.1\|1051541_1051724_+	hypothetical protein	NA	NA	NA	NA
WP_023610918.1\|1051864_1052626_-	phage antirepressor KilAC domain-containing protein	A0A0C5AEJ9	Bacteriophage	3.6e-85	61.9
WP_014411882.1\|1052636_1052876_-	helix-turn-helix transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	1.4e-35	98.7
WP_001008979.1\|1052927_1053569_+	hypothetical protein	J7KJ31	Streptococcus_phage	1.5e-116	100.0
WP_021733129.1\|1053667_1053826_-	hypothetical protein	J7KH24	Streptococcus_phage	1.7e-21	92.3
WP_111676459.1\|1054198_1054987_+	phage repressor protein	A0A1S5SD15	Streptococcus_phage	2.0e-86	63.0
WP_011106738.1\|1054996_1055302_+	membrane protein	NA	NA	NA	NA
WP_002990094.1\|1055425_1056565_+\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	3.4e-119	56.3
WP_111676461.1\|1056658_1057699_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.9e-68	43.9
1056631:1056681	attR	NA	NA	NA	NA
WP_002990099.1\|1057942_1058536_-	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
WP_011284728.1\|1058535_1059405_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.4e-101	64.6
WP_111676463.1\|1059462_1060569_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_111676465.1\|1060608_1061397_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_111676467.1\|1061386_1062073_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_014407519.1\|1062144_1062801_-	endonuclease III	NA	NA	NA	NA
WP_111676469.1\|1062797_1063481_-	DnaD domain-containing protein	Q938N2	Temperate_phage	1.7e-09	36.8
WP_002990109.1\|1063561_1064080_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
WP_111676471.1\|1064229_1066440_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.9e-71	30.2
WP_002984893.1\|1066436_1067201_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_009881223.1\|1067200_1068130_-	ribonuclease Z	NA	NA	NA	NA
WP_111676473.1\|1068144_1068780_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_032464325.1\|1068772_1070011_-	GTPase HflX	NA	NA	NA	NA
WP_111676475.1\|1070083_1070983_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA

DBSCAN-SWA_4

1161593 : 1172196

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011054352.1\|1161593_1162736_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	1.4e-24	27.3
WP_011017641.1\|1162970_1163411_+	membrane protein	NA	NA	NA	NA
WP_111676511.1\|1163440_1164709_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_111676513.1\|1164796_1166149_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-29	24.0
WP_002985134.1\|1166369_1166711_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
WP_002990262.1\|1166771_1167938_-	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
WP_002985140.1\|1168031_1168718_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_111676515.1\|1168714_1169878_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	2.6e-143	65.1
WP_109991880.1\|1169985_1172196_+	LTA synthase family protein	W6LM83	Streptococcus_phage	8.5e-268	68.9

DBSCAN-SWA_5

1306736 : 1344812

Streptococcus_phage(55.32%)

capsid,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002985529.1\|1306736_1308536_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	2.9e-109	36.8
WP_111676570.1\|1308834_1310037_-	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	5.0e-238	98.2
WP_111676573.1\|1310147_1310333_-	hypothetical protein	Q938J5	Temperate_phage	1.1e-24	96.7
WP_023078532.1\|1310329_1310626_-	hypothetical protein	Q938J6	Temperate_phage	2.9e-46	99.0
WP_063629046.1\|1310636_1311269_-	hypothetical protein	Q938J7	Temperate_phage	2.9e-43	48.1
WP_111676575.1\|1311271_1311700_-	DUF1617 family protein	Q938J8	Temperate_phage	8.3e-63	87.9
WP_111676577.1\|1311708_1313649_-	gp58-like family protein	Q938J9	Temperate_phage	1.2e-124	59.2
WP_111676579.1\|1313658_1314774_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	6.0e-129	67.5
WP_168422323.1\|1314773_1316741_-\|tail	phage tail protein	Q938K1	Temperate_phage	3.4e-103	38.1
WP_111676584.1\|1316722_1317418_-	hypothetical protein	A0A1B1P761	Bacillus_phage	6.2e-07	31.3
WP_111676586.1\|1317414_1319778_-	hypothetical protein	M1NRG5	Streptococcus_phage	1.3e-133	50.6
WP_111676588.1\|1319777_1320149_-	DUF5361 domain-containing protein	M1PL84	Streptococcus_phage	2.4e-34	60.8
WP_111676590.1\|1320163_1320427_-	hypothetical protein	A0A0B5A2F3	Streptococcus_phage	1.1e-17	54.7
WP_011888768.1\|1320437_1321016_-	hypothetical protein	A0A1X9I5X2	Streptococcus_phage	2.9e-58	62.9
WP_000573598.1\|1321027_1321363_-	hypothetical protein	A0A1P8BMR5	Lactococcus_phage	9.8e-35	64.9
WP_111676592.1\|1321363_1321600_-	hypothetical protein	A0A1P8BMT2	Lactococcus_phage	1.1e-21	66.7
WP_011054681.1\|1321592_1321931_-	hypothetical protein	A0A0B5A086	Streptococcus_phage	8.1e-45	75.0
WP_021733479.1\|1321890_1322313_-	phage protein Gp19/Gp15/Gp42	A0A0B5A2F6	Streptococcus_phage	8.2e-47	67.2
WP_010922460.1\|1322322_1322523_-	hypothetical protein	NA	NA	NA	NA
WP_063631463.1\|1322522_1323434_-\|capsid	phage major capsid protein	M1PFL0	Streptococcus_phage	4.9e-113	67.0
WP_032461147.1\|1323458_1323920_-	DUF4355 domain-containing protein	M1Q1L0	Streptococcus_phage	2.2e-37	52.6
WP_063631462.1\|1323990_1325406_-	hypothetical protein	A0A0B5A091	Streptococcus_phage	9.1e-215	74.6
WP_011888764.1\|1325487_1325724_-	hypothetical protein	M1IRA5	Streptococcus_phage	1.2e-31	80.3
WP_002986828.1\|1325725_1325992_-	hypothetical protein	Q938K9	Temperate_phage	6.4e-37	95.5
WP_032461150.1\|1325984_1326164_-	hypothetical protein	NA	NA	NA	NA
WP_002994100.1\|1326213_1326438_-	hypothetical protein	NA	NA	NA	NA
WP_011017978.1\|1326443_1327937_-	hypothetical protein	M1Q184	Streptococcus_phage	3.7e-89	55.6
WP_011017979.1\|1327929_1329198_-\|portal	phage portal protein	A0A1X9I693	Streptococcus_phage	2.4e-190	76.2
WP_002994106.1\|1329194_1329551_-	hypothetical protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
WP_063629033.1\|1329699_1330044_-	HNH endonuclease	M1Q0W7	Streptococcus_phage	4.2e-41	68.5
WP_010922470.1\|1330150_1330570_-	DUF1492 domain-containing protein	A0A1X9I5B5	Streptococcus_phage	8.7e-57	79.9
WP_046159671.1\|1330644_1330896_-	hypothetical protein	M1PF60	Streptococcus_phage	2.1e-18	59.0
WP_111676594.1\|1330892_1331618_-	DUF1642 domain-containing protein	Q938L9	Temperate_phage	2.4e-25	44.8
WP_111676596.1\|1331614_1331908_-	hypothetical protein	A0A097PAR1	Streptococcus_pyogenes_phage	1.8e-48	96.9
WP_172450060.1\|1331955_1332720_-	site-specific DNA-methyltransferase	Q9MCL7	Streptococcus_virus	3.7e-130	89.0
WP_109991512.1\|1332709_1333192_-	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	1.3e-85	91.2
WP_063631460.1\|1333195_1333465_-	hypothetical protein	A7J287	Streptococcus_phage	4.3e-25	73.0
WP_032463367.1\|1333641_1334154_-	phage protein	Q708P9	Streptococcus_phage	5.6e-66	78.0
WP_011888757.1\|1334150_1334492_-	hypothetical protein	M1NS23	Streptococcus_phage	3.1e-12	38.7
WP_011888756.1\|1334688_1335717_-	DUF1351 domain-containing protein	E8ZD61	Streptococcus_phage	9.5e-121	65.9
WP_111676599.1\|1335726_1336518_-	phage recombination protein Bet	A0A1S5SFP4	Streptococcus_phage	8.9e-119	81.6
WP_063629030.1\|1336520_1336850_-	hypothetical protein	J7KGX3	Streptococcus_phage	6.4e-47	85.3
WP_011017565.1\|1336905_1337112_-	hypothetical protein	NA	NA	NA	NA
WP_011017992.1\|1337120_1337261_-	hypothetical protein	NA	NA	NA	NA
WP_002988350.1\|1337257_1337491_-	hypothetical protein	Q938N1	Temperate_phage	1.8e-35	94.8
WP_011017564.1\|1337471_1337858_-	DnaD domain-containing protein	Q938N2	Temperate_phage	8.1e-25	51.9
WP_111676603.1\|1338360_1338546_-	hypothetical protein	Q938N3	Temperate_phage	2.8e-23	93.4
WP_111676605.1\|1338778_1338961_+	hypothetical protein	NA	NA	NA	NA
WP_010922479.1\|1339129_1339342_-	helix-turn-helix transcriptional regulator	A0A1X9I583	Streptococcus_phage	1.1e-10	56.7
WP_111676607.1\|1339543_1340299_+	helix-turn-helix transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	3.3e-78	61.2
WP_111676609.1\|1340310_1340829_+	restriction endonuclease	E8ZDN5	Streptococcus_phage	2.1e-31	45.9
WP_111676611.1\|1340960_1342418_+	recombinase family protein	Q38184	Lactococcus_phage	1.5e-132	50.7
WP_002990551.1\|1342768_1343152_-	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_020833361.1\|1343135_1343639_-	ECF transporter S component	NA	NA	NA	NA
WP_002985536.1\|1343963_1344812_+	glycoside hydrolase family 25 protein	A0A223LJI5	Bacillus_phage	1.9e-18	31.3

DBSCAN-SWA_6

1406165 : 1442252

Bacillus_phage(30.0%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111676646.1\|1406165_1408109_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.1e-120	38.7
WP_002994187.1\|1408530_1409865_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002985678.1\|1409866_1410865_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002985680.1\|1410995_1411997_-	catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
WP_031488434.1\|1412170_1413256_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_002985684.1\|1413304_1413970_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002985686.1\|1413980_1414358_+	VOC family protein	NA	NA	NA	NA
WP_011017477.1\|1414502_1415429_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	2.0e-77	47.5
WP_012560521.1\|1415639_1416323_+	DUF969 domain-containing protein	NA	NA	NA	NA
WP_111676648.1\|1416322_1417249_+	DUF979 family protein	NA	NA	NA	NA
WP_002994169.1\|1417298_1417946_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_111676650.1\|1418063_1418783_-	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA
WP_002994152.1\|1418788_1419256_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.7e-41	57.0
WP_111676652.1\|1419258_1421592_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.6e-89	39.4
WP_002985700.1\|1421685_1421922_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_002990729.1\|1421967_1422114_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_111676654.1\|1422110_1423304_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_111676656.1\|1423425_1424928_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	1.1e-74	41.3
WP_063629109.1\|1425117_1425711_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_002990742.1\|1425707_1426535_-	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
WP_002990747.1\|1426706_1427573_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_128650799.1\|1427661_1427730_+	peptide pheromone SHP2	NA	NA	NA	NA
WP_020833327.1\|1428643_1428913_+	quorum-sensing system protein StcA	NA	NA	NA	NA
WP_168690190.1\|1429260_1429659_-	histidine kinase	NA	NA	NA	NA
WP_047235194.1\|1431072_1431474_-	hypothetical protein	NA	NA	NA	NA
WP_111676660.1\|1431667_1431949_-	hypothetical protein	NA	NA	NA	NA
WP_002990768.1\|1431998_1432193_-	hypothetical protein	NA	NA	NA	NA
WP_003060803.1\|1432486_1432687_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_042361549.1\|1432699_1432927_-\|bacteriocin	bacteriocin BlpM	NA	NA	NA	NA
WP_111676662.1\|1433213_1435367_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	2.8e-42	28.1
WP_111676664.1\|1435377_1436742_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_011017462.1\|1436818_1436944_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_080147975.1\|1437091_1438426_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_030126108.1\|1438426_1439176_-	response regulator transcription factor	A0A1V0E029	Clostridioides_phage	3.1e-20	27.5
WP_111676666.1\|1441113_1442022_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	8.5e-49	41.3
WP_110407836.1\|1441970_1442252_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1496296 : 1502337

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111676702.1\|1496296_1497124_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.5
WP_014407341.1\|1497197_1497554_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.8e-39	65.0
WP_009880724.1\|1497859_1498489_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_023609786.1\|1498535_1498928_-	hypothetical protein	NA	NA	NA	NA
WP_111676704.1\|1498954_1499818_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	8.5e-115	74.7
WP_002985838.1\|1499822_1500146_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
WP_010921931.1\|1500808_1501684_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.7e-63	43.8
WP_014635306.1\|1501701_1502337_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.0e-65	63.4

DBSCAN-SWA_8

1817044 : 1843528

Streptococcus_phage(90.48%)

tRNA,integrase

attL 1809003:1809017|attR 1831555:1831569

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1809003:1809017	attL	NA	NA	NA	NA
WP_111674761.1\|1817044_1817458_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	1.3e-20	70.7
WP_111676909.1\|1817459_1818566_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_002992310.1\|1818622_1819486_-	EamA family transporter	NA	NA	NA	NA
WP_001291561.1\|1819811_1821029_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_000814511.1\|1821110_1821314_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_000857133.1\|1821774_1822005_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000804885.1\|1822001_1822424_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_001227347.1\|1822928_1823282_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_000336323.1\|1823341_1823509_-	cysteine-rich KTR domain-containing protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_000691736.1\|1823627_1825547_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.5
WP_001814923.1\|1825562_1825679_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_001224318.1\|1825923_1826856_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
WP_000769868.1\|1826852_1827854_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_000804748.1\|1827850_1830028_-	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000331160.1\|1830030_1832478_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
1831555:1831569	attR	NA	NA	NA	NA
WP_000506270.1\|1832461_1832968_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000342539.1\|1832942_1833440_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_001009056.1\|1833556_1833778_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000398284.1\|1833820_1835026_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_031764745.1\|1835048_1835201_-	hypothetical protein	NA	NA	NA	NA
WP_000813488.1\|1835203_1836589_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000985015.1\|1836617_1837004_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000420682.1\|1837019_1837334_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_111676911.1\|1837727_1839209_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.6e-95	40.7
WP_002991455.1\|1839516_1840539_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_002982011.1\|1840957_1841830_+	YitT family protein	NA	NA	NA	NA
WP_002981986.1\|1841908_1843528_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.2e-45	25.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage