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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LS483373 Bartonella quintana strain NCTC12899 chromosome 1 0 crisprs NA 0 0 116 0

Results visualization

1. NZ_LS483373
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2800 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_2 15316 : 15550 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_3 42229 : 53662 11 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 61423 : 63349 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_5 67789 : 75147 6 Klosneuvirus(25.0%) NA NA
DBSCAN-SWA_6 80522 : 85705 5 Mycobacterium_phage(40.0%) NA NA
DBSCAN-SWA_7 93866 : 101395 7 Emiliania_huxleyi_virus(25.0%) protease NA
DBSCAN-SWA_8 108747 : 111285 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_9 115072 : 116870 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 120219 : 121329 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_11 126703 : 128626 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_12 136795 : 159155 17 Bartonella_henselae_phage(20.0%) tRNA NA
DBSCAN-SWA_13 171551 : 173390 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_14 178840 : 179503 1 Brucella_phage(100.0%) NA NA
DBSCAN-SWA_15 186812 : 187493 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_16 190741 : 197777 6 Edwardsiella_phage(33.33%) NA NA
DBSCAN-SWA_17 200841 : 205835 3 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_18 211165 : 216235 3 Cyanophage(50.0%) NA NA
DBSCAN-SWA_19 225002 : 225260 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_20 228399 : 229776 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_21 247926 : 248778 1 Pseudoalteromonas_phage(100.0%) NA NA
DBSCAN-SWA_22 258452 : 259385 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_23 265876 : 266581 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_24 269744 : 272069 1 Acidianus_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_25 277393 : 281873 4 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_26 288356 : 289553 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_27 296467 : 300761 2 Caulobacter_phage(50.0%) NA NA
DBSCAN-SWA_28 312172 : 316281 4 Caulobacter_phage(33.33%) NA NA
DBSCAN-SWA_29 320647 : 321157 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_30 344415 : 353539 5 Sphingobium_phage(33.33%) NA NA
DBSCAN-SWA_31 358164 : 364872 6 Burkholderia_virus(25.0%) protease NA
DBSCAN-SWA_32 368806 : 369928 1 Bordetella_phage(100.0%) NA NA
DBSCAN-SWA_33 376605 : 378949 2 Ochrobactrum_phage(50.0%) NA NA
DBSCAN-SWA_34 382493 : 385007 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_35 389327 : 390227 1 Bartonella_henselae_phage(100.0%) NA NA
DBSCAN-SWA_36 396251 : 409392 10 Klosneuvirus(20.0%) tRNA NA
DBSCAN-SWA_37 420542 : 433244 10 Tupanvirus(16.67%) protease,tRNA NA
DBSCAN-SWA_38 438681 : 447099 6 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_39 463036 : 478075 9 Megavirus(20.0%) tRNA NA
DBSCAN-SWA_40 488417 : 490667 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_41 493688 : 507427 13 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_42 515147 : 516647 1 Rhizobium_phage(100.0%) tRNA NA
DBSCAN-SWA_43 520469 : 543031 15 Hokovirus(12.5%) protease NA
DBSCAN-SWA_44 558306 : 559080 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_45 570518 : 581246 7 Erysipelothrix_phage(20.0%) tRNA NA
DBSCAN-SWA_46 595890 : 602223 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_47 614837 : 624181 6 Lactococcus_phage(25.0%) NA NA
DBSCAN-SWA_48 628732 : 630212 2 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_49 633916 : 634492 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_50 644518 : 653153 6 Phage_Wrath(20.0%) tRNA NA
DBSCAN-SWA_51 661036 : 675656 11 environmental_halophage(16.67%) tRNA NA
DBSCAN-SWA_52 685701 : 688991 3 Planktothrix_phage(50.0%) tRNA NA
DBSCAN-SWA_53 711063 : 715760 6 Vibrio_phage(25.0%) tRNA NA
DBSCAN-SWA_54 719905 : 723977 5 Staphylococcus_phage(75.0%) NA NA
DBSCAN-SWA_55 744536 : 746341 2 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_56 757769 : 766691 6 Burkholderia_phage(20.0%) protease NA
DBSCAN-SWA_57 770818 : 783356 12 Pseudomonas_phage(14.29%) NA NA
DBSCAN-SWA_58 789290 : 795209 7 uncultured_Mediterranean_phage(83.33%) tRNA NA
DBSCAN-SWA_59 801219 : 801642 1 Megavirus(100.0%) NA NA
DBSCAN-SWA_60 805587 : 806877 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_61 815776 : 820332 5 Prochlorococcus_phage(66.67%) NA NA
DBSCAN-SWA_62 825362 : 837261 10 Streptococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_63 840582 : 856978 16 Morganella_phage(16.67%) NA NA
DBSCAN-SWA_64 863593 : 864388 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_65 871549 : 879508 5 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_66 885745 : 887257 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_67 891738 : 893828 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_68 902329 : 905120 2 Bacillus_thuringiensis_phage(50.0%) NA NA
DBSCAN-SWA_69 910304 : 917904 6 Stenotrophomonas_phage(25.0%) NA NA
DBSCAN-SWA_70 922380 : 923655 1 Bandra_megavirus(100.0%) NA NA
DBSCAN-SWA_71 928602 : 929070 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_72 940067 : 944265 4 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_73 950796 : 956364 6 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_74 970169 : 977487 7 Roseobacter_phage(33.33%) NA NA
DBSCAN-SWA_75 986083 : 987511 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_76 997680 : 998568 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_77 1012391 : 1013351 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_78 1029628 : 1030762 1 Bovine_gammaherpesvirus(100.0%) NA NA
DBSCAN-SWA_79 1035036 : 1040202 2 Yellowstone_lake_mimivirus(50.0%) NA NA
DBSCAN-SWA_80 1066994 : 1069649 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_81 1123122 : 1125123 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_82 1129240 : 1132992 2 Synechococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_83 1144189 : 1146196 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_84 1158523 : 1173863 12 Vibrio_phage(33.33%) capsid,terminase,tail,portal NA
DBSCAN-SWA_85 1181269 : 1181767 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_86 1193855 : 1198920 4 Agrobacterium_phage(33.33%) NA NA
DBSCAN-SWA_87 1209774 : 1210437 1 Brucella_phage(100.0%) NA NA
DBSCAN-SWA_88 1218250 : 1218808 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_89 1222665 : 1226662 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_90 1249037 : 1252561 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_91 1260213 : 1262309 2 Ochrobactrum_phage(50.0%) NA NA
DBSCAN-SWA_92 1265938 : 1266850 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_93 1285898 : 1300592 10 Staphylococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_94 1303707 : 1306146 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_95 1333367 : 1338468 5 Rhizobium_phage(66.67%) NA NA
DBSCAN-SWA_96 1341612 : 1343229 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_97 1357436 : 1358183 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_98 1361410 : 1362505 1 Moraxella_phage(100.0%) tRNA NA
DBSCAN-SWA_99 1365668 : 1366352 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_100 1383936 : 1385034 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_101 1388067 : 1391017 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_102 1402510 : 1403917 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_103 1416010 : 1420967 5 uncultured_phage(33.33%) NA NA
DBSCAN-SWA_104 1429695 : 1433529 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_105 1439291 : 1441923 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_106 1450149 : 1452152 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_107 1462176 : 1466058 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_108 1472131 : 1478509 4 Methanothermobacter_phage(33.33%) NA NA
DBSCAN-SWA_109 1488960 : 1491468 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_110 1495916 : 1496564 1 Beihai_sea_slater_virus(100.0%) NA NA
DBSCAN-SWA_111 1501338 : 1509493 6 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_112 1513656 : 1519594 6 Synechococcus_phage(66.67%) tRNA NA
DBSCAN-SWA_113 1523265 : 1526513 5 Lake_Baikal_phage(50.0%) tRNA NA
DBSCAN-SWA_114 1530138 : 1535225 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_115 1562749 : 1563943 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_116 1568084 : 1568711 1 Bacillus_virus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage