CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2 crisprs	DEDDh,PrimPol,cas3,DinG,RT	0	0	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483417_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483417_1

117013-117108

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483417_1

>merge|NZ_LS483417|1|117013-117108|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>NZ_LS483417|1|1|117013-117108|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483417.1\|WP_000808456.1\|114057_115122_-\|membrane-protein	unknown	unknown	gnl\|CDD\|370966
NZ_LS483417.1\|WP_000838912.1\|123337_124009_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_LS483417.1\|WP_000714582.1\|107887_108817_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_LS483417.1\|WP_000273864.1\|116668_116995_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_LS483417.1\|WP_001230165.1\|125636_125924_+\|lactococcin-972-family-bacteriocin	unknown	unknown	gnl\|CDD\|273735
NZ_LS483417.1\|WP_000500038.1\|122456_123329_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_LS483417.1\|WP_001140350.1\|113019_113880_+\|DUF4299-domain-containing-protein	unknown	unknown	gnl\|CDD\|339103
NZ_LS483417.1\|WP_000198697.1\|116088_116682_-\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|227053
NZ_LS483417.1\|WP_001233696.1\|115184_116096_-\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NZ_LS483417.1\|WP_001814399.1\|107344_107566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483417.1\|WP_000200892.1\|121802_122435_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_LS483417.1\|WP_000724259.1\|125975_128084_+\|bacteriocin-associated-integral-membrane-family-protein	unknown	unknown	gnl\|CDD\|273736
NZ_LS483417.1\|WP_001075104.1\|108830_109754_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LS483417.1\|WP_001030031.1\|111758_112745_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_LS483417.1\|WP_000744911.1\|117133_118300_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_LS483417.1\|WP_001035699.1\|119556_121407_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_LS483417.1\|WP_000836450.1\|124250_124838_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_LS483417.1\|WP_000800407.1\|110011_111487_+\|DUF3502-domain-containing-protein	unknown	unknown	gnl\|CDD\|378792
NZ_LS483417.1\|WP_000096196.1\|118357_119515_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133016
NZ_LS483417.1\|WP_001189286.1\|124889_125210_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LS483417.1\|WP_000808456.1\|114057_115122_-\|membrane-protein	gnl\|CDD\|370966	pfam10310, DUF5427, Family of unknown function (DUF5427). This is a domain of unknown function. Family members found in Saccharomyces cerevisiae, are synthetic lethal with genes involved in maintenance of telomere capping. However, experimental evidence is yet to verify the exact function of family members and the domain.	5.27948e-06
NZ_LS483417.1\|WP_000838912.1\|123337_124009_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
NZ_LS483417.1\|WP_001140350.1\|113019_113880_+\|DUF4299-domain-containing-protein	gnl\|CDD\|339103	pfam14132, DUF4299, Domain of unknown function (DUF4299). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 275 and 313 amino acids in length. There are two conserved sequence motifs: RGF and DAY. There are two completely conserved residues (P and D) that may be functionally important.	5.97594e-121
NZ_LS483417.1\|WP_000273864.1\|116668_116995_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12912e-19
NZ_LS483417.1\|WP_001230165.1\|125636_125924_+\|lactococcin-972-family-bacteriocin	gnl\|CDD\|273735	TIGR01653, hypothetical_protein, bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein. [Cellular processes, Toxin production and resistance].	6.91587e-26
NZ_LS483417.1\|WP_000500038.1\|122456_123329_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	2.65225e-106
NZ_LS483417.1\|WP_000096196.1\|118357_119515_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	2.60604e-108
NZ_LS483417.1\|WP_000198697.1\|116088_116682_-\|DUF1700-domain-containing-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	7.13921e-64
NZ_LS483417.1\|WP_001233696.1\|115184_116096_-\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	9.9455e-40
NZ_LS483417.1\|WP_000714582.1\|107887_108817_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
NZ_LS483417.1\|WP_000200892.1\|121802_122435_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.4095e-97
NZ_LS483417.1\|WP_000724259.1\|125975_128084_+\|bacteriocin-associated-integral-membrane-family-protein	gnl\|CDD\|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	0
NZ_LS483417.1\|WP_001075104.1\|108830_109754_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.34244e-69
NZ_LS483417.1\|WP_001030031.1\|111758_112745_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
NZ_LS483417.1\|WP_000744911.1\|117133_118300_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.28125e-124
NZ_LS483417.1\|WP_001035699.1\|119556_121407_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_LS483417.1\|WP_000836450.1\|124250_124838_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	1.09004e-14
NZ_LS483417.1\|WP_000800407.1\|110011_111487_+\|DUF3502-domain-containing-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.24398e-44

>NZ_LS483417.1|WP_000273864.1|116668_116995_-|PadR-family-transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWTLYTDTINGIIEGSIRHDKN
>NZ_LS483417.1|WP_000198697.1|116088_116682_-|DUF1700-domain-containing-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEVAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVARFFGLLIVRLVQFVLKKGKRGNQHA
>NZ_LS483417.1|WP_001233696.1|115184_116096_-|DUF4097-domain-containing-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTENHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>NZ_LS483417.1|WP_000808456.1|114057_115122_-|membrane-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVADKAEETIADLDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEGGEARTEIEEKKASNSTEEEPDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQAPKSRDKWKEQVLDFWSWLVEAIKSPTSKLETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIISILVATTLFFFSFLLGSFVVRRFIHQEKDWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>NZ_LS483417.1|WP_001140350.1|113019_113880_+|DUF4299-domain-containing-protein
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDYEAIARLDYAKFLEVLPPSFYHQLDANQIEMQPILDKDFKTLAQEK
>NZ_LS483417.1|WP_001030031.1|111758_112745_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEELWFKIDEENEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>NZ_LS483417.1|WP_000800407.1|110011_111487_+|DUF3502-domain-containing-protein
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>NZ_LS483417.1|WP_001075104.1|108830_109754_+|carbohydrate-ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLLALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>NZ_LS483417.1|WP_000714582.1|107887_108817_+|sugar-ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>NZ_LS483417.1|WP_001814399.1|107344_107566_+|hypothetical-protein
MSLQIKLKKLAKELSKLLKDSNLETVDKDVLENSQEELQKAVLFLADEKGSEHTEAELIDNLKAVIAKLKANA
>NZ_LS483417.1|WP_000744911.1|117133_118300_-|CynX/NimT-family-MFS-transporter
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPLSTQLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTAMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPAVAALLLIDILMTVALFTVDRADKIL
>NZ_LS483417.1|WP_000096196.1|118357_119515_+|glycosyltransferase-family-2-protein
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREYGYKIRYSPSILSYQYIRPTFKKMLHQKYLNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGFGTIVGLIRGFKWKKEYKRTIIYLDKISQINKNML
>NZ_LS483417.1|WP_001035699.1|119556_121407_+|polysaccharide-biosynthesis-protein
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFHTLSGDELKQAIIAFANQTTHIE
>NZ_LS483417.1|WP_000200892.1|121802_122435_-|HAD-family-hydrolase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>NZ_LS483417.1|WP_000500038.1|122456_123329_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>NZ_LS483417.1|WP_000838912.1|123337_124009_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>NZ_LS483417.1|WP_000836450.1|124250_124838_+|LysM-peptidoglycan-binding-domain-containing-protein
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVGQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>NZ_LS483417.1|WP_001189286.1|124889_125210_-|hypothetical-protein
MQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
>NZ_LS483417.1|WP_001230165.1|125636_125924_+|lactococcin-972-family-bacteriocin
MRKLVKIGVASLMVCGILATTNALAVWVEGGQWNYGVGWTGTFGYSDYLHSTRYHTATVRHGGRTSKDYAKPEAWARASLTKIPPTGMEYFYGFE
>NZ_LS483417.1|WP_000724259.1|125975_128084_+|bacteriocin-associated-integral-membrane-family-protein
MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFFAHALLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

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Crispr_ID: NZ_LS483417_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483417_2

1424080-1424216

Orphan

Consensus_repeat	Method
ACTTCTGGTGTCGGTACATTTGGTGTTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LS483417_2

>merge|NZ_LS483417|2|1424080-1424216|CRISPRCasFinder
ACTGGTTTAACCGGTACTTCTGGTGTTGGAACAGCTGGAGTTGGTTGTACTGGCACTTCTGGTGTCGGTACATTTGGTGTTGGTTGCGCTGGCACAGGTTTAACCGGTACTTCTGGTGTCGGCACATTTGGTGTTGG

>NZ_LS483417|2|2|1424080-1424216|CRISPRCasFinder
ACTGGTTTAACCGGTACTTCTGGTGTTGG	AACAGCTGGAGTTGGTTGTACTGGC
ACTTCTGGTGTCGGTACATTTGGTGTTGG	TTGCGCTGGCACAGGTTTAACCGGT
ACTTCTGGTGTCGGCACATTTGGTGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483417.1\|WP_000068664.1\|1418180_1418420_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_LS483417.1\|WP_000412218.1\|1433972_1434383_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|181704
NZ_LS483417.1\|WP_000697775.1\|1431327_1432056_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_LS483417.1\|WP_001151785.1\|1418933_1419224_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_LS483417.1\|WP_000689596.1\|1416124_1416484_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|180908
NZ_LS483417.1\|WP_001138805.1\|1441497_1442682_-\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|237339
NZ_LS483417.1\|WP_001279153.1\|1439629_1441501_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_LS483417.1\|WP_161801414.1\|1419376_1420723_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176
NZ_LS483417.1\|WP_000039618.1\|1423089_1423638_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223508
NZ_LS483417.1\|WP_000813916.1\|1438302_1439487_+\|CDF-family-manganese-efflux-transporter-MntE	unknown	unknown	gnl\|CDD\|223131
NZ_LS483417.1\|WP_000609607.1\|1418451_1418922_-\|single-stranded-DNA-binding-protein-SsbA	unknown	unknown	gnl\|CDD\|180915
NZ_LS483417.1\|WP_000339019.1\|1416485_1417886_-\|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_LS483417.1\|WP_000565218.1\|1420738_1421104_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_LS483417.1\|WP_000508269.1\|1432134_1432299_-\|YczI-family-protein	unknown	unknown	gnl\|CDD\|315732
NZ_LS483417.1\|WP_000032467.1\|1435302_1437999_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_LS483417.1\|WP_000822872.1\|1432365_1433961_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483417.1\|WP_000747261.1\|1422280_1422769_-\|DUF5590-domain-containg-protein	unknown	unknown	gnl\|CDD\|227656
NZ_LS483417.1\|WP_000777779.1\|1421096_1422284_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_LS483417.1\|WP_001277413.1\|1434498_1435290_-\|glutathione-dependent-disulfide-bond-oxidoreductase	unknown	unknown	gnl\|CDD\|183298
NZ_LS483417.1\|WP_001245200.1\|1429792_1431277_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285470

Protein	Function_ID	Function_description	E-value
NZ_LS483417.1\|WP_000068664.1\|1418180_1418420_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	3.32721e-37
NZ_LS483417.1\|WP_000697775.1\|1431327_1432056_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	5.15942e-96
NZ_LS483417.1\|WP_001151785.1\|1418933_1419224_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.40041e-37
NZ_LS483417.1\|WP_000689596.1\|1416124_1416484_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|180908	PRK07252, PRK07252, S1 RNA-binding domain-containing protein.	7.1116e-79
NZ_LS483417.1\|WP_001138805.1\|1441497_1442682_-\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|237339	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional.	0
NZ_LS483417.1\|WP_001279153.1\|1439629_1441501_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_LS483417.1\|WP_161801414.1\|1419376_1420723_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_LS483417.1\|WP_000039618.1\|1423089_1423638_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	1.06789e-32
NZ_LS483417.1\|WP_000813916.1\|1438302_1439487_+\|CDF-family-manganese-efflux-transporter-MntE	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.68565e-101
NZ_LS483417.1\|WP_000609607.1\|1418451_1418922_-\|single-stranded-DNA-binding-protein-SsbA	gnl\|CDD\|180915	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional.	1.66017e-101
NZ_LS483417.1\|WP_000339019.1\|1416485_1417886_-\|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	1.67702e-61
NZ_LS483417.1\|WP_000565218.1\|1420738_1421104_-\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.44563e-33
NZ_LS483417.1\|WP_000508269.1\|1432134_1432299_-\|YczI-family-protein	gnl\|CDD\|315732	pfam13129, DUF3953, Protein of unknown function (DUF3953). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 47 and 76 amino acids in length.	0.000993842
NZ_LS483417.1\|WP_000032467.1\|1435302_1437999_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_LS483417.1\|WP_000412218.1\|1433972_1434383_-\|peptide-deformylase	gnl\|CDD\|181704	PRK09218, PRK09218, peptide deformylase; Validated.	1.13138e-90
NZ_LS483417.1\|WP_000747261.1\|1422280_1422769_-\|DUF5590-domain-containg-protein	gnl\|CDD\|227656	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown].	6.13568e-60
NZ_LS483417.1\|WP_000777779.1\|1421096_1422284_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_LS483417.1\|WP_001277413.1\|1434498_1435290_-\|glutathione-dependent-disulfide-bond-oxidoreductase	gnl\|CDD\|183298	PRK11752, PRK11752, putative S-transferase; Provisional.	0
NZ_LS483417.1\|WP_001245200.1\|1429792_1431277_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	3.52256e-76

>NZ_LS483417.1|WP_000039618.1|1423089_1423638_+|NAD(P)H-dependent-oxidoreductase
MSKKVLFIVGSLRQGSFNHQMALEAEKALAGKAEVSYLDYSALPLFSQDLEVPTHPAVAAAREAVLVADAIWIFSPVYNFSIPGTVKNLLDWLSRALDLSDTRGVSALQDKFVTVSSVANAGHDQLFAIYKDLLPFIRTQGVGDFTAARVNDSAWADGKLVLEETVLNSLEKQAQDLVEAIQ
>NZ_LS483417.1|WP_000747261.1|1422280_1422769_-|DUF5590-domain-containg-protein
MKKRQNKAKNNLLWQYGLGMTILFVVISGSFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLGRNKQQEALAVLIGKDDHKIYVYQLNQGVSQEKAETVSKEKGAGEIDKITFGRYQDKPIWEVKSGSDFYLVDFETGALVNKEGL
>NZ_LS483417.1|WP_000777779.1|1421096_1422284_-|pyridoxal-phosphate-dependent-aminotransferase
MKLSNRVLEMEESVTLAAGARAKALKAEGRDILSLTLGEPDFTTPKNIQDAAIASIRDGRASFYTVTSGLPELKAAVNSYFERFYGYSVASNQVTVAAGAKYSLYTFFMAVVNPGDEVIIPTPYWVSYGDQVKMAEGVPVFVSAKEDNHFKVTVEQLEAARTDKTKVLVLNSPSNPTGMIYTREELLAIGNWAVENDILILADDIYGRLVYNGHEFTPISSLSEAIRKQTVVINGVSKTYAMTGWRIGYAVGEADIIAAMSKIAGQTTSNPSAVAQYAAVEALSGEQDTVESMRQAFEERLNTIYPLLAEVPGFEVVKPQGAFYLFPNVKKAMEMKGYTDVTDFTTVILEEAEVALVTGAGFGAPENVRLSYATDLDTLKEAVERLKAFMGSEND
>NZ_LS483417.1|WP_000565218.1|1420738_1421104_-|VOC-family-protein
MIDHFEIKVKDLQISEGFYRSFLAPLDYKLAFKTSSLISFLSPNSPHPGGDFWLTQGTQDPVHFAFLAENKEEVQACYEAGLEAGGRDNGAPGYRSEHPIYYAAFMIDLDGNNIEVVCHKE
>NZ_LS483417.1|WP_161801414.1|1419376_1420723_-|asparagine--tRNA-ligase
MMTKRVTIIDVKDYVGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRLSQETSVYVTGIVKEDERSKFGYELDITDIEVIGESQDYPITPKEHGTDFLMDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEHENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEYEFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRIKP
>NZ_LS483417.1|WP_001151785.1|1418933_1419224_-|30S-ribosomal-protein-S6
MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLYHIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA
>NZ_LS483417.1|WP_000609607.1|1418451_1418922_-|single-stranded-DNA-binding-protein-SsbA
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRNENPFGATNPLDISDDDLPF
>NZ_LS483417.1|WP_000068664.1|1418180_1418420_-|30S-ribosomal-protein-S18
MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPFVNED
>NZ_LS483417.1|WP_000339019.1|1416485_1417886_-|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase
MDAKLRYKAKKIKIVFFDIDDTLRNSKTGFIPTTIPTVFKQLREKGILTGIASGRGIFGVVPEIRDLKPDFFVTLNGAYIEDKKGQVIYQHQIEKSDVEEYISWAKQEGIEYGLVGSHDAKLSTRTDMMSEAINPIYPDLDVDPDFHEKEDIYQMWTFEDKGDDLHLPDSLSDKLRMVRWHQHSSDIVPISGSKATGVEKVVEHLGLKPEKVMVFGDGLNDLELFDYAGISVAMGISHDKIKEKADYITKTLEEDGIFAALEVFGMVEKELHFPQVDIETVEGPLATIKTNHGDLRIKLFPEHAPKTVANFVSLSKDGYYDGVIFHRIIKDFMIQGGDPTGTGMGGQSIYGESFEDEFSEELYNIRGALSMANAGPNTNGSQFFIVQNQHLPYSKKEITRGGWPEPIAEIYANQGGTPHLDRRHTVFGQLADEASYAVLDAIAAVETGAMDKPVEDVVIETIEIED
>NZ_LS483417.1|WP_000689596.1|1416124_1416484_-|S1-RNA-binding-domain-containing-protein
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVDLDEFTGKASLSIRTLEEEKYQFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKKK
>NZ_LS483417.1|WP_001245200.1|1429792_1431277_+|helix-turn-helix-domain-containing-protein
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQSSVNGIMIDLEVNTSVEDIYQYFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRLGRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSERYYFLDWPFPDLPEEDLTEFADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQETLAYFSKHLGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILERLSKQYKITFTNHDELIWHLHNTAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQELAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRPPIKVLIISNFDHAISLTFVDMLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNHLNTLSNEIHLSNTL
>NZ_LS483417.1|WP_000697775.1|1431327_1432056_-|peroxide-stress-protein-YaaA
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNIQALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAPHRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFMEDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVKEV
>NZ_LS483417.1|WP_000508269.1|1432134_1432299_-|YczI-family-protein
MGFYLMVASMLLGLLALKIGFSQFKEKKDKFLSILTSLAGTALVLVAVWLGWPK
>NZ_LS483417.1|WP_000822872.1|1432365_1433961_-|hypothetical-protein
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRHGKAEAALNLEGFKINRLGKILLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFTEFPRSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAADTYTQLTIDGKPYRVTPLEYADPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIFKTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIYPAEETIEQINYNGKYKDGFLNAMISKKNVTQTTKGYNYLSIGNDIYLYTGVTSANADESNLGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYKATFPILINLNDKPLYIMGLKDNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESINGVVADLKSAVIKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKLR
>NZ_LS483417.1|WP_000412218.1|1433972_1434383_-|peptide-deformylase
MEKKIVKDILFLSQVSQPASQEDLYLARDLQDTLLANHDTCVGLAANMIGVQKRVIIFNLGLVPVVMFNPVLLSFEGSYEAEEGCLSLVGVRSTKRYETIRVAYRDSKWQEQTITLTGFPAQICQHELDHLEGRII
>NZ_LS483417.1|WP_001277413.1|1434498_1435290_-|glutathione-dependent-disulfide-bond-oxidoreductase
MSAYQLPTVWQDEASNQGAFTGLNRPTVGARFEQNLPKGEQAFQLYSLGTPNGVKVTILLEELLEAGFKEAAYDLYKIAIMDGDQFGSDFVKLNPNSKIPALLDQSGTESVRVFESAHILLYLAEKFGAFLPSNPVEKVEVLNWLFWQAGAAPFLGGGFGHFFNYAPEKLEYPINRFTMEVKRQLDLLDKELAQKPYIAGNDYTIADIAIWSWYGQLVQGNLYQGSAKFLDASSYQNLVKWAEKIANRPAVKRGLEVTYTEIK
>NZ_LS483417.1|WP_000032467.1|1435302_1437999_-|cation-translocating-P-type-ATPase
MSKEQKRQAFYTQSPEEVLQAVDATEQGLSSSEAEKRLAEFGHNELEEGEKRSILVKFIEQFKDLMIIILVAAAILSVVTSGGEDIADAIIILAVVIINAAFGVYQEGKAEEAIEALKSMSSPVARVLRDGHMAEIDSKELVPGDIVALEAGDVVPADLRLLEANSLKIEEAALTGESVPVEKDLSVELATDAGIGDRVNMAFQNSNVTYGRGMGVVVNTGMYTEVGHIAGMLQDADETDTPLKQNLNNLSKVLTYAILVIALVTFVVGVFIQGKNPLGELLTSVALAVAAIPEGLPAIVTIVLSLGTQVLAKRHSIVRKLPAVETLGSTEIIASDKTGTLTMNKMTVEKVFYDAVLHDSADDIELGLEMPLLRSVVLANDTKIDVEGNLIGDPTETAFIQYALDKGYDVKGFLEKYPRVAELPFDSDRKLMSTVHPLPDGRFLVAVKGAPDQLLKRCLLRDKAGDIAPIDEKVTNLIHTNNSEMAHQALRVLAGAYKIIDSIPENLTSEELENDLIFTGLIGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDANDTEDHVLTGAELNELSDEDFEKVVGQYSVYARVSPEHKVRIVKAWQKQGKVVAMTGDGVNDAPALKTADIGIGMGITGTEVSKGASDMILADDNFATIIVAVEEGRKVFSNIQKTIQYLLSANTAEVLTIFLSTLFGWDVLQPVHLLWINLVTDTFPAIALGVEPAEPGVMNHKPRGRKASFFSGGVLSSIIYQGVLQAALVMSVYGLAIAYPVHVGDNHAIHADALTMAFATLGLIQLFHAYNVKSVYQSILTVGPFKSKTFNWSILVSFILLMATIVVEPLEGIFHVTKLDLSQWGIVMAGSFSMIIIVEIVKFIQRKLGFDKNAI
>NZ_LS483417.1|WP_000813916.1|1438302_1439487_+|CDF-family-manganese-efflux-transporter-MntE
MKQSISNLKLAERGAIISISTYLILSAAKLAAGHLLHSSSLVADGFNNVSDIIGNVALLIGIRMARQPADRDHRFGHWKIEDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGATLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDAVTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTYGSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVYKKLLMREQLIDQGNQLEELLTDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQKTKLICYELDGIIHTSIWRRHETWQNIFHQETKKE
>NZ_LS483417.1|WP_001279153.1|1439629_1441501_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFDDRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLRRRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDYVRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQDVSFAYENKPILQDFNLLVQVKDRIGIVGDNGVGKSTLLNLIAGSLESTKGQVVIGETVRIAYFSQQIEGLDESKRVINYLQEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENFLQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEKQEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS
>NZ_LS483417.1|WP_001138805.1|1441497_1442682_-|CCA-tRNA-nucleotidyltransferase
MPSEFQKALPVLEKIKEAGFEAYFVGGSVRDALLHSPIHDVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFVRSLEEDLKRRDFTVNAFALDETGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLEKISVERTFVEFDKLLLAPFWRRGLASMIESQAYDYLPDMASSQDKLNRLFDLETDFTFESSEQAWAALLWALEIENAQSFLKSWKTSRQFAKQVQDLLIILALRENGELSKRDCYRFDIDLLLQAENLRQAQGKEVNLQAITEKYQSLTIHDKKEIQINGDILIKEYGYQPGPDLGEILTEIEFAIVDGELENNREAIHAYLREKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61804 : 73260

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000668298.1\|61804_63958_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.2e-46	28.2
WP_000801609.1\|63970_65320_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000043303.1\|65489_66197_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.8e-41	39.2
WP_000361211.1\|66398_70124_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.3e-37	26.0
WP_000220633.1\|70216_71659_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-55	35.1
WP_000182578.1\|71695_72718_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.2e-64	43.9
WP_000717501.1\|72714_73260_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.7e-24	35.0

DBSCAN-SWA_2

125636 : 158368

Streptococcus_phage(50.0%)

bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001230165.1\|125636_125924_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000724259.1\|125975_128084_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571330.1\|128080_128722_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
WP_001038470.1\|128928_129735_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_001814401.1\|129751_130948_+	argininosuccinate synthase	NA	NA	NA	NA
WP_001107614.1\|130976_132368_+	argininosuccinate lyase	NA	NA	NA	NA
WP_001268172.1\|132656_133520_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000915347.1\|133985_136205_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	5.2e-39	25.3
WP_001096141.1\|136197_136665_+	hypothetical protein	NA	NA	NA	NA
WP_000781027.1\|136661_138014_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_000424422.1\|138159_138540_+\|bacteriocin	SP_0115 family bacteriocin-like peptide	NA	NA	NA	NA
WP_001189286.1\|139042_139363_-	hypothetical protein	NA	NA	NA	NA
WP_000424429.1\|140120_140492_+\|bacteriocin	SPH_0218 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000909532.1\|140499_140712_+	hypothetical protein	NA	NA	NA	NA
WP_001814583.1\|141593_142652_+	hypothetical protein	NA	NA	NA	NA
WP_001810729.1\|142965_143943_+	hypothetical protein	NA	NA	NA	NA
WP_000424474.1\|144413_144788_+\|bacteriocin	SPH_0224 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000619773.1\|144995_145898_+	hypothetical protein	NA	NA	NA	NA
WP_000424404.1\|145953_146307_+	hypothetical protein	NA	NA	NA	NA
WP_000072919.1\|146303_147032_+	hypothetical protein	NA	NA	NA	NA
WP_000770318.1\|148167_148407_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	9.5e-16	52.7
WP_001810727.1\|148391_148670_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	6.0e-22	52.7
WP_001035326.1\|148955_151091_+	pneumococcal surface protein A	NA	NA	NA	NA
WP_001282978.1\|151491_152613_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000193612.1\|152753_153209_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000220964.1\|153218_155132_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000331980.1\|155483_157163_-	ribonuclease J	NA	NA	NA	NA
WP_000639589.1\|157164_157398_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_000282479.1\|157677_157893_+	hypothetical protein	NA	NA	NA	NA
WP_000974047.1\|158215_158368_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	NA	NA	NA	NA

DBSCAN-SWA_3

294645 : 370004

Streptococcus_phage(33.33%)

transposase,protease,holin,integrase

attL 290959:290974|attR 309779:309794

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
290959:290974	attL	NA	NA	NA	NA
WP_001211068.1\|294645_295068_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000050748.1\|295214_295391_+	hypothetical protein	NA	NA	NA	NA
WP_000688726.1\|295791_298005_+	alpha-xylosidase	NA	NA	NA	NA
WP_000203066.1\|298226_298703_-	glutathione peroxidase	NA	NA	NA	NA
WP_001193717.1\|298925_302129_+	LPXTG-anchored hyaluronate lyase	NA	NA	NA	NA
WP_000167295.1\|303273_303903_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_000161493.1\|303912_304914_-	sugar kinase	NA	NA	NA	NA
WP_000684777.1\|304944_305586_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_000185877.1\|305604_306420_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_000706826.1\|306691_307126_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000592948.1\|307137_308328_+	unsaturated chondroitin disaccharide hydrolase	NA	NA	NA	NA
WP_111690871.1\|308338_308830_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_000026610.1\|308844_309624_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_000148012.1\|309610_310429_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
309779:309794	attR	NA	NA	NA	NA
WP_000381738.1\|310428_310722_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_000657059.1\|310743_312645_+	alginate lyase family protein	NA	NA	NA	NA
WP_000412453.1\|312704_313706_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000838117.1\|313815_314151_-	hypothetical protein	NA	NA	NA	NA
WP_000711739.1\|314161_314404_-	hypothetical protein	NA	NA	NA	NA
WP_000712382.1\|314414_314957_-	DUF3278 domain-containing protein	NA	NA	NA	NA
WP_001082474.1\|314972_315167_-	helix-turn-helix transcriptional regulator	I3VYZ1	Thermoanaerobacterium_phage	7.2e-06	42.6
WP_000159414.1\|315332_316283_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_000818547.1\|316294_316612_+	cell division protein FtsL	NA	NA	NA	NA
WP_000872267.1\|316615_318868_+	penicillin-binding protein 2X	NA	NA	NA	NA
WP_000470785.1\|318869_319850_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_001063435.1\|320457_322563_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	2.6e-117	37.7
WP_000032550.1\|322859_323342_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000743571.1\|323436_324921_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_001156818.1\|325073_326681_+	alpha-glucosidase	NA	NA	NA	NA
WP_172454081.1\|326883_327012_+	S-ribosylhomocysteinase	NA	NA	NA	NA
WP_000091075.1\|327746_329192_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	3.1e-133	59.9
WP_000565362.1\|329193_329925_+	hypothetical protein	NA	NA	NA	NA
WP_000664182.1\|329933_330626_+	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.6e-60	55.0
WP_001142507.1\|330635_331319_+	polysaccharide biosynthesis tyrosine autokinase CpsD	A0A1X9I5D6	Streptococcus_phage	2.4e-72	59.9
WP_000358337.1\|331334_332702_+	sugar transferase	NA	NA	NA	NA
WP_000861662.1\|332705_333155_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA
WP_000578433.1\|333154_333658_+	multidrug MFS transporter	NA	NA	NA	NA
WP_000702184.1\|333647_334820_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_000573793.1\|334816_335836_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_000389894.1\|335850_336807_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.6e-13	39.3
WP_000066237.1\|337735_339199_+	flippase	NA	NA	NA	NA
WP_111690896.1\|344077_344944_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_000842570.1\|346663_348646_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001032457.1\|348946_354250_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_001040003.1\|354416_356576_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_000248787.1\|356572_357169_-	Holliday junction resolvase RecU	A0A1L2JY30	Aeribacillus_phage	8.7e-18	33.9
WP_001155321.1\|357534_358488_+\|transposase	IS30-like element ISSpn8 family transposase	H7BWC8	unidentified_phage	1.6e-34	35.2
WP_079012923.1\|358480_359008_+	DUF1273 family protein	NA	NA	NA	NA
WP_000146522.1\|359077_359407_+	cell division regulator GpsB	NA	NA	NA	NA
WP_000711391.1\|359892_361050_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000039255.1\|361062_362457_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA
WP_000158781.1\|362532_363957_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.6e-41	29.6
WP_000518011.1\|363968_364658_+	response regulator transcription factor	NA	NA	NA	NA
WP_000771113.1\|364755_365778_+\|holin	choline-binding protein CbpC	NA	NA	NA	NA
WP_000698048.1\|365795_366794_+\|holin	choline-binding protein CbpJ	NA	NA	NA	NA
WP_000765692.1\|366911_368144_-	MFS transporter	NA	NA	NA	NA
WP_016397727.1\|368186_368774_-	hypothetical protein	NA	NA	NA	NA
WP_001811282.1\|368673_369012_-	lantibiotic-modifying protein	NA	NA	NA	NA
WP_000196981.1\|369674_370004_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

429591 : 491675

Bacillus_phage(15.38%)

transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079012916.1\|429591_430533_-\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	1.5e-24	31.1
WP_000280769.1\|430787_431633_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000904574.1\|431779_432841_-	DNA polymerase IV	NA	NA	NA	NA
WP_000260638.1\|433188_435513_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	5.1e-114	32.8
WP_001828945.1\|435880_436099_-	hypothetical protein	NA	NA	NA	NA
WP_001814393.1\|436194_436443_-	hypothetical protein	NA	NA	NA	NA
WP_000384133.1\|436435_436720_-	hypothetical protein	NA	NA	NA	NA
WP_074186948.1\|437908_438166_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_001814392.1\|438290_439730_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_000691691.1\|439733_441083_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_001063601.1\|441271_442120_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA
WP_000403166.1\|442134_442683_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_000693302.1\|442689_442902_+	hypothetical protein	NA	NA	NA	NA
WP_000656524.1\|443003_444686_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-19	34.4
WP_001148110.1\|444670_445501_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000181374.1\|445693_446197_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000185835.1\|446649_447213_+	ECF transporter S component	NA	NA	NA	NA
WP_001820561.1\|447226_447853_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000867290.1\|447880_448270_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_000333653.1\|448274_448724_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000418402.1\|448851_449439_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_000105232.1\|449828_451436_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.0e-141	47.0
WP_000026679.1\|451994_453626_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_000795214.1\|453918_458859_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA
WP_001096743.1\|458948_460145_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000119893.1\|460280_460808_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000659547.1\|460884_461241_+	transcriptional repressor GlnR	NA	NA	NA	NA
WP_001122904.1\|461277_462624_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001808898.1\|462719_462839_-	hypothetical protein	NA	NA	NA	NA
WP_000410535.1\|462803_462953_+	hypothetical protein	NA	NA	NA	NA
WP_111690873.1\|463672_464683_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000651181.1\|464739_465537_+	tyrosine-type DNA invertase PsrA	A0A0H4TI16	Erysipelothrix_phage	1.7e-21	28.7
WP_001813510.1\|465547_466153_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_001813066.1\|466100_466823_-	restriction endonuclease subunit S	A0A1V0SLK8	Klosneuvirus	4.6e-13	30.1
WP_000029046.1\|467655_469119_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_000229083.1\|469131_471465_-	DEAD/DEAH box helicase family protein	A0A097BY72	Enterococcus_phage	4.5e-25	26.5
WP_001840591.1\|472419_473766_+\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	1.3e-77	40.0
WP_078169601.1\|473978_474290_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000255768.1\|474453_475488_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_000046031.1\|475514_476039_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000034662.1\|476518_478342_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.3e-133	47.2
WP_000114432.1\|478343_478700_+	hypothetical protein	NA	NA	NA	NA
WP_001066294.1\|479101_480238_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	3.1e-24	31.3
WP_000777761.1\|480617_480905_-	hypothetical protein	NA	NA	NA	NA
WP_001112361.1\|480914_481325_-	HIT family protein	B5LJ12	Mycobacterium_phage	4.4e-05	35.6
WP_000889923.1\|481392_482124_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.0e-25	28.6
WP_000653767.1\|482120_483170_+	ABC transporter permease	NA	NA	NA	NA
WP_000132572.1\|483337_483667_-	hypothetical protein	NA	NA	NA	NA
WP_000682135.1\|483943_484282_+	response regulator transcription factor	NA	NA	NA	NA
WP_001219122.1\|484286_485024_+	response regulator transcription factor	NA	NA	NA	NA
WP_001017626.1\|485037_486378_+	sensor histidine kinase	NA	NA	NA	NA
WP_000358817.1\|486419_486575_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA
WP_001069091.1\|486631_487993_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_078133841.1\|488003_489647_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	6.3e-42	27.4
WP_001810228.1\|489573_490161_-	peptidase C39	NA	NA	NA	NA
WP_001093259.1\|490442_490640_+\|bacteriocin	bacteriocin-like peptide BlpI	NA	NA	NA	NA
WP_001093248.1\|491106_491376_+\|bacteriocin	bacteriocin-like peptide BlpJ	NA	NA	NA	NA
WP_000379964.1\|491444_491675_+\|bacteriocin	bacteriocin-like peptide BlpU	NA	NA	NA	NA

DBSCAN-SWA_5

784359 : 865667

Streptococcus_phage(33.33%)

transposase,tRNA,holin,protease,integrase,bacteriocin

attL 811068:811112|attR 862788:862832

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001840591.1\|784359_785706_+\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	1.3e-77	40.0
WP_000920159.1\|787151_787649_+	GAF domain-containing protein	NA	NA	NA	NA
WP_000283791.1\|787648_789304_+	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	6.5e-47	33.5
WP_001041549.1\|789331_789526_+	DUF3272 domain-containing protein	NA	NA	NA	NA
WP_000114489.1\|789675_790446_+	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	2.5e-09	28.5
WP_000196405.1\|790473_791736_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000887717.1\|791746_792973_+	cysteine desulfurase	Q2XUY6	environmental_halophage	1.9e-104	44.8
WP_001218482.1\|792959_793400_+	SUF system NifU family Fe-S cluster assembly protein	A0A2P1CJL8	Mycobacterium_phage	1.6e-13	39.0
WP_000797065.1\|793453_794866_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_000719154.1\|795064_796306_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.2e-18	25.5
WP_000489841.1\|796408_797518_+	AI-2E family transporter	NA	NA	NA	NA
WP_000920670.1\|798942_799683_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000640780.1\|799679_800591_+	1-phosphofructokinase	NA	NA	NA	NA
WP_000701423.1\|800587_802540_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000908830.1\|802703_804929_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	3.7e-85	49.9
WP_000073929.1\|804973_805411_-	hypothetical protein	NA	NA	NA	NA
WP_000638912.1\|805548_806691_+	cysteine desulfurase	NA	NA	NA	NA
WP_001200077.1\|806699_807914_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_001076710.1\|808049_808874_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000546757.1\|808895_809549_+	esterase family protein	NA	NA	NA	NA
WP_001108631.1\|809648_810815_+	hypothetical protein	NA	NA	NA	NA
811068:811112	attL	NA	NA	NA	NA
WP_000627748.1\|811322_812816_+	SAM-dependent DNA methyltransferase	A0A2H4UVB0	Bodo_saltans_virus	3.0e-27	31.8
WP_001814483.1\|812828_813752_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000260605.1\|813843_814080_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_000158359.1\|814076_814490_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_000444456.1\|814607_815573_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.8e-33	29.6
WP_000756217.1\|815606_816623_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000526352.1\|816850_820201_+	DEAD/DEAH box helicase family protein	A0A2H4P9W3	Gordonia_phage	1.4e-11	24.8
WP_001042996.1\|820786_821257_-	arginine repressor	NA	NA	NA	NA
WP_001212052.1\|821273_823547_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_000561514.1\|823892_826994_+	DNA polymerase III subunit alpha	A0A291AWR1	Streptomyces_phage	2.3e-114	32.8
WP_000820852.1\|827076_828084_+	6-phosphofructokinase	NA	NA	NA	NA
WP_001042809.1\|828142_829648_+	pyruvate kinase	NA	NA	NA	NA
WP_000749599.1\|831410_832283_+	DUF4300 family protein	NA	NA	NA	NA
WP_000420563.1\|832915_833227_+	hypothetical protein	NA	NA	NA	NA
WP_000759790.1\|833230_833947_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000617843.1\|834076_834892_-	TIGR03943 family protein	NA	NA	NA	NA
WP_000123620.1\|834888_835794_-	permease	NA	NA	NA	NA
WP_000359137.1\|836179_838309_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_000778577.1\|838295_838745_+	SprT family protein	NA	NA	NA	NA
WP_001085044.1\|838803_839076_+	PspC domain-containing protein	NA	NA	NA	NA
WP_000173352.1\|840046_840805_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-26	36.3
WP_000489391.1\|840806_842795_+	ABC transporter permease	NA	NA	NA	NA
WP_162837274.1\|842836_843481_-	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_001153906.1\|843452_844502_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.2e-33	34.4
WP_000661011.1\|845208_846684_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000366717.1\|847620_848481_+	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_000088773.1\|848477_849737_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA
WP_000764381.1\|849736_850864_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_000969449.1\|850860_851946_+	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	2.0e-89	47.5
WP_001246755.1\|851955_852831_+	N-carbamoylputrescine amidase	M1H5W0	Paramecium_bursaria_Chlorella_virus	1.1e-77	50.0
WP_000593566.1\|853011_853821_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000602452.1\|854092_854314_+\|bacteriocin	SP_0924 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000745382.1\|854367_855039_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001809535.1\|855090_855288_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001025704.1\|855280_856189_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.1e-06	27.7
WP_000745387.1\|856185_856647_+	signal peptidase II	NA	NA	NA	NA
WP_000403214.1\|856636_857524_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_000728276.1\|857526_859410_+\|holin	phosphorylcholine esterase CbpE	Q332B9	Clostridium_botulinum_C_phage	1.2e-09	22.9
WP_001844793.1\|859489_860620_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-114	58.4
WP_000254689.1\|860629_861892_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.0e-140	64.8
WP_000689709.1\|861895_862693_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	2.7e-59	50.6
WP_000033362.1\|862912_863551_+	dTMP kinase	M1PSC7	Streptococcus_phage	9.8e-76	68.1
862788:862832	attR	NA	NA	NA	NA
WP_000806706.1\|863547_864438_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.4e-72	51.4
WP_000358228.1\|864477_864795_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
WP_001166882.1\|864797_865667_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.9e-115	75.7

DBSCAN-SWA_6

1004898 : 1077918

Streptococcus_phage(53.33%)

transposase,protease,integrase

attL 1044813:1044872|attR 1078050:1079751

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100066212.1\|1004898_1005702_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_000992855.1\|1005894_1008186_+	DNA helicase PcrA	A7KV33	Bacillus_phage	9.5e-129	41.1
WP_000286922.1\|1008228_1008909_+	DNA repair protein RadC	NA	NA	NA	NA
WP_000743316.1\|1008905_1009595_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_000653403.1\|1009612_1010254_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_000462487.1\|1010336_1010552_-	DUF4649 family protein	NA	NA	NA	NA
WP_000863509.1\|1010559_1010907_-	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_000639664.1\|1010911_1012027_-	cysteine desulfurase	H7BUW1	unidentified_phage	1.0e-27	36.8
WP_001283813.1\|1012036_1012996_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	9.3e-38	32.8
WP_000681292.1\|1013108_1013678_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_000171676.1\|1013805_1014477_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_000799053.1\|1014460_1015279_+	NAD kinase	NA	NA	NA	NA
WP_001210004.1\|1015275_1016172_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_000451586.1\|1016215_1017190_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_000981522.1\|1017530_1017830_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_000109138.1\|1019119_1019434_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_000613700.1\|1019449_1019794_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_000916509.1\|1019810_1020104_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_000587444.1\|1021057_1021975_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_000592056.1\|1022067_1022916_-	YitT family protein	M1Q1P6	Streptococcus_phage	1.4e-64	46.5
WP_000161397.1\|1023057_1023897_+	DegV family protein	NA	NA	NA	NA
WP_001284639.1\|1024002_1024278_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	9.2e-23	66.3
WP_000584903.1\|1024705_1026607_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.6e-51	29.3
WP_000400550.1\|1026609_1027473_+	MutR family transcriptional regulator	NA	NA	NA	NA
WP_001083027.1\|1027552_1028731_+	MFS transporter	NA	NA	NA	NA
WP_001042587.1\|1028823_1030782_+	NAD-dependent DNA ligase LigA	A0A1W6DX16	Sphingobium_phage	6.0e-100	35.9
WP_000283068.1\|1030893_1033173_+	type I pullulanase	NA	NA	NA	NA
WP_000199371.1\|1033716_1035141_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_000370236.1\|1035623_1037552_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_000787277.1\|1037541_1038684_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_000687072.1\|1038673_1039813_+	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA
WP_000697294.1\|1039809_1041243_+	glycogen synthase GlgA	NA	NA	NA	NA
WP_000706432.1\|1041955_1042759_+	glycerate kinase	W6LM47	Streptococcus_phage	1.4e-34	35.0
WP_000131076.1\|1042755_1043202_-	YueI family protein	NA	NA	NA	NA
WP_000022815.1\|1043365_1044670_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	8.1e-234	94.2
1044813:1044872	attL	NA	NA	NA	NA
WP_001808790.1\|1045003_1046350_-\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	5.8e-78	40.0
WP_025171968.1\|1046515_1046962_-\|integrase	tyrosine-type recombinase/integrase	W6LMU7	Streptococcus_phage	1.6e-40	73.6
WP_000772358.1\|1048234_1051510_+	ATP-dependent nuclease subunit B	NA	NA	NA	NA
WP_000767268.1\|1051506_1055157_+	helicase-exonuclease AddAB subunit AddA	G3MA40	Bacillus_virus	8.8e-20	25.3
WP_001814475.1\|1055416_1056697_+	hypothetical protein	NA	NA	NA	NA
WP_000417141.1\|1056804_1062828_+	G5 domain-containing protein	NA	NA	NA	NA
WP_000054802.1\|1062871_1068196_+	G5 domain-containing protein	NA	NA	NA	NA
WP_001808790.1\|1068362_1069709_+\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	5.8e-78	40.0
WP_057484782.1\|1069871_1071041_-	ATP-binding protein	NA	NA	NA	NA
WP_000817623.1\|1071402_1071759_+	hypothetical protein	NA	NA	NA	NA
WP_000401239.1\|1071763_1072129_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA
WP_000237145.1\|1072115_1073939_+	relaxase/mobilization nuclease domain-containing protein	A0A1B0RXG0	Streptococcus_phage	2.3e-05	35.9
WP_000537005.1\|1074052_1074919_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000098314.1\|1075509_1075761_+	hypothetical protein	NA	NA	NA	NA
WP_000792536.1\|1075989_1076292_+	hypothetical protein	NA	NA	NA	NA
WP_001808790.1\|1076571_1077918_+\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	5.8e-78	40.0
1078050:1079751	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1278331 : 1334004

Bacillus_virus(23.53%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000811727.1\|1278331_1280950_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	5.3e-59	33.6
WP_000847075.1\|1280971_1281457_-	LURP-one-related family protein	NA	NA	NA	NA
WP_000784180.1\|1281731_1281971_-	hypothetical protein	NA	NA	NA	NA
WP_000725682.1\|1282231_1283302_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000712728.1\|1283298_1284072_-	ABC transporter permease	NA	NA	NA	NA
WP_000753801.1\|1284068_1284875_-	ABC transporter permease	Q6GZ02	Mycoplasma_phage	2.5e-12	26.5
WP_000742919.1\|1284855_1286013_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	7.6e-34	40.4
WP_000116180.1\|1286172_1287078_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_000360294.1\|1287951_1288683_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_000744821.1\|1288824_1290096_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.2e-103	47.5
WP_000837359.1\|1290115_1290931_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_111690884.1\|1291195_1292452_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.1e-223	91.9
WP_000946463.1\|1292510_1293164_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000128643.1\|1293175_1293934_-	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-15	29.7
WP_000109217.1\|1293946_1294750_-	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.6e-12	30.7
WP_001201789.1\|1294760_1295645_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_001070908.1\|1295634_1296552_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_000746338.1\|1296551_1297430_-	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA
WP_001160271.1\|1298003_1299308_-	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_000444037.1\|1299308_1300082_-	inositol monophosphatase family protein	NA	NA	NA	NA
WP_001041971.1\|1300071_1300350_-	UPF0223 family protein	NA	NA	NA	NA
WP_000631259.1\|1300349_1300751_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_000850626.1\|1300960_1301578_-	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_000875468.1\|1301567_1302341_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_000524774.1\|1302351_1303089_-	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA
WP_001170072.1\|1303093_1304224_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_000517372.1\|1304307_1304697_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_000895040.1\|1304712_1305096_-	DUF948 domain-containing protein	NA	NA	NA	NA
WP_000886666.1\|1305096_1305885_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_000115143.1\|1305877_1306813_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_000048055.1\|1306942_1307119_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_001155321.1\|1307478_1308432_+\|transposase	IS30-like element ISSpn8 family transposase	H7BWC8	unidentified_phage	1.6e-34	35.2
WP_000864623.1\|1308504_1309212_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_001090150.1\|1309362_1310391_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_073177112.1\|1311051_1312179_-	G5 domain-containing protein	NA	NA	NA	NA
WP_000835658.1\|1312893_1313445_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000058034.1\|1313742_1314567_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	5.3e-74	57.1
WP_000283119.1\|1314563_1316024_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	1.5e-103	43.3
WP_000797184.1\|1316139_1316628_-	hypothetical protein	NA	NA	NA	NA
WP_001107505.1\|1316617_1316827_-	helix-turn-helix transcriptional regulator	A0A1V0E021	Clostridioides_phage	4.1e-07	49.1
WP_000640912.1\|1317212_1317665_-	hypothetical protein	NA	NA	NA	NA
WP_076709045.1\|1318004_1318748_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-22	36.4
WP_111690886.1\|1319183_1319903_-	U32 family peptidase	NA	NA	NA	NA
WP_001811050.1\|1320158_1320470_-	hypothetical protein	NA	NA	NA	NA
WP_000169109.1\|1320484_1321771_-	U32 family peptidase	Q6DW11	Phage_TP	1.6e-40	31.1
WP_001262531.1\|1322394_1322577_+	ApaLI family restriction endonuclease	NA	NA	NA	NA
WP_078169604.1\|1322586_1322937_+	ApaLI family restriction endonuclease	NA	NA	NA	NA
WP_000217307.1\|1322944_1324135_+	site-specific DNA-methyltransferase	A0A0H3UZ66	Geobacillus_virus	7.0e-43	37.4
WP_000122909.1\|1324649_1325642_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000708386.1\|1325801_1327556_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-23	25.2
WP_000657828.1\|1327539_1329261_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-28	26.4
WP_000368971.1\|1329271_1329856_+	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_001141951.1\|1329855_1330551_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000229349.1\|1330538_1331903_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.2e-15	27.6
WP_001811052.1\|1332357_1332516_-\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_000245766.1\|1332587_1333037_-\|transposase	transposase	NA	NA	NA	NA
WP_024266141.1\|1333109_1333829_-\|transposase	transposase	NA	NA	NA	NA
WP_000691854.1\|1333809_1334004_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1339980 : 1377261

Streptococcus_phage(23.08%)

holin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290654.1\|1339980_1340616_-\|holin	1-alkyl-2-acetylglycerophosphocholine esterase	A0A2K9L661	Tupanvirus	1.3e-06	26.9
WP_000972923.1\|1340617_1341445_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_001272961.1\|1343044_1343656_+	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-16	42.4
WP_000855754.1\|1343700_1344429_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000272304.1\|1344467_1345379_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.0e-89	51.5
WP_000926600.1\|1345444_1345669_-	DUF4059 family protein	NA	NA	NA	NA
WP_000590970.1\|1345746_1346490_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-29	40.5
WP_001103449.1\|1346489_1347290_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000889093.1\|1347447_1347804_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
WP_001170347.1\|1347797_1348328_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.4e-46	54.3
WP_000405832.1\|1348327_1348822_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	1.9e-42	52.1
WP_000858729.1\|1348956_1349403_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_001097986.1\|1349399_1350047_+	hemolysin III family protein	NA	NA	NA	NA
WP_000689945.1\|1350067_1350649_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_000138532.1\|1350649_1351525_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_000036789.1\|1351676_1353056_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000175413.1\|1353349_1354273_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_000915945.1\|1354332_1354938_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	4.5e-54	54.2
WP_000673678.1\|1354955_1356200_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	3.8e-55	52.7
WP_000371287.1\|1356422_1356680_-	DUF896 family protein	NA	NA	NA	NA
WP_000164754.1\|1356721_1358758_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000038732.1\|1358969_1359887_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_000429568.1\|1360430_1361192_-	hypothetical protein	NA	NA	NA	NA
WP_001099672.1\|1361464_1362307_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.2e-51	39.8
WP_050076198.1\|1362420_1363812_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_001811065.1\|1364046_1364424_-\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA
WP_000915891.1\|1364656_1365634_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000850581.1\|1365630_1366713_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.8e-37	31.3
WP_111690888.1\|1366776_1367824_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001040724.1\|1369680_1370877_-	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.3e-32	29.6
WP_001155321.1\|1371040_1371994_-\|transposase	IS30-like element ISSpn8 family transposase	H7BWC8	unidentified_phage	1.6e-34	35.2
WP_000348126.1\|1373032_1373902_-	aquaporin family protein	NA	NA	NA	NA
WP_000248992.1\|1374125_1374647_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_001021423.1\|1374604_1375711_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_000935666.1\|1375821_1376076_-	hypothetical protein	NA	NA	NA	NA
WP_000200308.1\|1376415_1376949_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_001811210.1\|1376935_1377151_-\|transposase	transposase	NA	NA	NA	NA
WP_001811209.1\|1377117_1377261_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1448058 : 1454809

Streptococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000081011.1\|1448058_1449024_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.8e-66	100.0
WP_000011310.1\|1449057_1449969_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	9.8e-154	99.3
WP_001231086.1\|1449965_1450943_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.2e-184	100.0
WP_000163033.1\|1450939_1451830_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.9e-06	29.8
WP_001140412.1\|1451881_1452262_-	RidA family protein	NA	NA	NA	NA
WP_000422599.1\|1452272_1452860_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_000106346.1\|1452868_1454101_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-131	59.0
WP_000442275.1\|1454132_1454303_-	hypothetical protein	NA	NA	NA	NA
WP_000162485.1\|1454302_1454809_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	6.7e-27	42.5

DBSCAN-SWA_10

1924277 : 1982035

Bacillus_phage(25.0%)

transposase,tRNA,holin,protease,integrase

attL 1951770:1951809|attR 1982796:1982835

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000183464.1\|1924277_1924694_+\|transposase	transposase	NA	NA	NA	NA
WP_000415103.1\|1925441_1926458_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_000202216.1\|1926479_1927379_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.1e-76	51.0
WP_000658494.1\|1927445_1928123_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_000834343.1\|1928106_1928646_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_000885100.1\|1928657_1929788_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_000127472.1\|1929855_1930554_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_001820821.1\|1930783_1931695_-	EamA family transporter	NA	NA	NA	NA
WP_001180983.1\|1931759_1934225_-	penicillin-binding protein	NA	NA	NA	NA
WP_000546887.1\|1934366_1935623_+\|tRNA	tyrosine--tRNA ligase	A0A2C9CYK4	Yersinia_phage	1.5e-75	41.5
WP_000008784.1\|1935700_1937764_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	9.9e-53	26.0
WP_000910909.1\|1937765_1938044_-	hypothetical protein	NA	NA	NA	NA
WP_001095507.1\|1938195_1939044_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_001037912.1\|1939888_1940461_+	membrane protein	NA	NA	NA	NA
WP_000950158.1\|1941505_1943764_-	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	5.7e-09	37.5
WP_000747287.1\|1943789_1945307_-	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_000095478.1\|1945856_1947128_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000414968.1\|1947238_1948531_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_001065636.1\|1948532_1949375_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_000938224.1\|1949635_1950436_+	DUF1189 domain-containing protein	NA	NA	NA	NA
WP_001145439.1\|1950445_1951432_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
1951770:1951809	attL	NA	NA	NA	NA
WP_000806289.1\|1951812_1952754_-	YitT family protein	NA	NA	NA	NA
WP_000830876.1\|1952731_1954495_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	5.0e-13	26.4
WP_000832202.1\|1954846_1955077_-	hypothetical protein	NA	NA	NA	NA
WP_000771214.1\|1955094_1955736_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000730279.1\|1955747_1956482_-	DUF3169 family protein	NA	NA	NA	NA
WP_001046144.1\|1956484_1956682_-	hypothetical protein	NA	NA	NA	NA
WP_001176227.1\|1956681_1956888_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001816607.1\|1956897_1957212_-	hypothetical protein	NA	NA	NA	NA
WP_000775882.1\|1957549_1958839_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000770613.1\|1958916_1960164_-	hypothetical protein	NA	NA	NA	NA
WP_000434966.1\|1960354_1961206_-	transcriptional regulator Rgg	NA	NA	NA	NA
WP_001204054.1\|1961329_1961671_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_000137356.1\|1961924_1963628_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_000986381.1\|1963860_1964793_-	transketolase family protein	NA	NA	NA	NA
WP_000603778.1\|1964789_1965647_-	transketolase	A0A2K9L6P9	Tupanvirus	7.1e-29	31.2
WP_000975292.1\|1965650_1966997_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000912476.1\|1967009_1967294_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000460924.1\|1967297_1969328_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_000136837.1\|1969518_1970526_+	SPFH domain-containing protein	NA	NA	NA	NA
WP_000796544.1\|1970528_1970729_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000290417.1\|1970880_1971063_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_001265622.1\|1971078_1971228_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_000862760.1\|1971319_1972816_-\|integrase	site-specific integrase	A0A2I6PEN0	Staphylococcus_phage	1.1e-19	27.4
WP_000571454.1\|1972831_1973080_-	hypothetical protein	NA	NA	NA	NA
WP_001099062.1\|1973141_1974158_-	replication initiation factor domain-containing protein	NA	NA	NA	NA
WP_000262970.1\|1974162_1974582_-	hypothetical protein	NA	NA	NA	NA
WP_000924762.1\|1974851_1975136_-	hypothetical protein	NA	NA	NA	NA
WP_001002894.1\|1975154_1975292_-	hypothetical protein	NA	NA	NA	NA
WP_000488482.1\|1975278_1976625_-	cell division protein FtsK	R4JMR0	Bacillus_phage	9.2e-07	27.6
WP_000867242.1\|1976820_1977042_-	hypothetical protein	NA	NA	NA	NA
WP_000614814.1\|1977242_1977554_-	hypothetical protein	NA	NA	NA	NA
WP_001096737.1\|1977837_1978023_-	hypothetical protein	NA	NA	NA	NA
WP_000753881.1\|1978859_1980725_-\|holin	choline-binding protein PcpA	NA	NA	NA	NA
WP_001809622.1\|1981059_1981242_+	ATP-binding protein	NA	NA	NA	NA
WP_088788744.1\|1981186_1982035_+\|transposase	IS5 family transposase	NA	NA	NA	NA
1982796:1982835	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2071396 : 2080150

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000510412.1\|2071396_2072236_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	1.1e-15	32.6
WP_000835710.1\|2072220_2073048_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.1e-22	32.9
WP_000712136.1\|2073044_2073590_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_001227958.1\|2073600_2074422_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000170203.1\|2074463_2075747_-	insulinase family protein	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	1.6e-16	31.0
WP_000424273.1\|2075743_2076994_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	2.0e-93	42.3
WP_000455903.1\|2077152_2077521_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	7.0e-18	57.3
WP_000266660.1\|2077523_2078621_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_000073428.1\|2078671_2080150_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.2e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LS483417

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection