CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483496	Haemophilus influenzae strain NCTC8455 chromosome 1	1 crisprs	csa3,DEDDh,DinG,cas3	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483496_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483496_1

583460-583582

Orphan

Consensus_repeat	Method
GGGTAGATATAAGCGTTCCCCAAAGGGGAACCACGATTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483496_1

>merge|NZ_LS483496|1|583460-583582|CRISPRCasFinder
GGGTAGATATAAGCGTTCCCCAAAGGGGAACCACGATTACCATCACTAACCGTGGGTATACTTACCCACGGCTTACAAACCGAGGGTAGATATAAGCGTTCCCCAAAGGGGAACTACGATTAC

>NZ_LS483496|1|1|583460-583582|CRISPRCasFinder
GGGTAGATATAAGCGTTCCCCAAAGGGGAACCACGATTAC	CATCACTAACCGTGGGTATACTTACCCACGGCTTACAAACCGA
GGGTAGATATAAGCGTTCCCCAAAGGGGAACTACGATTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483496.1\|WP_111688865.1\|576020_577565_+\|Na(+)/H(+)-antiporter-NhaB	unknown	unknown	gnl\|CDD\|181942
NZ_LS483496.1\|WP_005641249.1\|591911_592514_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|223430
NZ_LS483496.1\|WP_050948864.1\|573758_575126_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|236510
NZ_LS483496.1\|WP_021034386.1\|581139_581934_-\|NAD(+)-diphosphatase	unknown	unknown	gnl\|CDD\|234699
NZ_LS483496.1\|WP_050948867.1\|584087_585431_-\|type-IV-pilus-secretin-PilQ	unknown	unknown	gnl\|CDD\|274173
NZ_LS483496.1\|WP_050948866.1\|583635_584091_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_LS483496.1\|WP_005630954.1\|580102_580375_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
NZ_LS483496.1\|WP_050948865.1\|582673_583360_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|272958
NZ_LS483496.1\|WP_021034387.1\|580513_581104_-\|YjaG-family-protein	unknown	unknown	gnl\|CDD\|225610
NZ_LS483496.1\|WP_005652116.1\|590451_591297_+\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	unknown	unknown	gnl\|CDD\|225509
NZ_LS483496.1\|WP_050948868.1\|585440_585854_-\|pilus-assembly-protein-PilP	unknown	unknown	unknown
NZ_LS483496.1\|WP_005629464.1\|591449_591779_+\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_LS483496.1\|WP_050948870.1\|586368_586878_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483496.1\|WP_050847365.1\|575170_575896_-\|fatty-acid-metabolism-transcriptional-regulator-FadR	unknown	unknown	gnl\|CDD\|163028
NZ_LS483496.1\|WP_021034389.1\|577574_578108_+\|disulfide-bond-formation-protein-DsbB	unknown	unknown	gnl\|CDD\|234979
NZ_LS483496.1\|WP_050948869.1\|585850_586372_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483496.1\|WP_021034385.1\|582001_582598_-\|Fe-S-biogenesis-protein-NfuA	unknown	unknown	gnl\|CDD\|183027
NZ_LS483496.1\|WP_050948872.1\|587774_590375_+\|penicillin-binding-protein-1A	unknown	unknown	gnl\|CDD\|227342
NZ_LS483496.1\|WP_021034388.1\|578161_579994_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_LS483496.1\|WP_050948871.1\|586878_587676_-\|pilus-assembly-protein-PilM	unknown	unknown	gnl\|CDD\|227306

Protein	Function_ID	Function_description	E-value
NZ_LS483496.1\|WP_111688865.1\|576020_577565_+\|Na(+)/H(+)-antiporter-NhaB	gnl\|CDD\|181942	PRK09547, nhaB, sodium/proton antiporter NhaB.	0
NZ_LS483496.1\|WP_005641249.1\|591911_592514_+\|recombination-protein-RecR	gnl\|CDD\|223430	COG0353, RecR, Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair].	2.47883e-123
NZ_LS483496.1\|WP_050948864.1\|573758_575126_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|236510	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase.	0
NZ_LS483496.1\|WP_021034386.1\|581139_581934_-\|NAD(+)-diphosphatase	gnl\|CDD\|234699	PRK00241, nudC, NAD(+) diphosphatase.	1.41902e-155
NZ_LS483496.1\|WP_050948867.1\|584087_585431_-\|type-IV-pilus-secretin-PilQ	gnl\|CDD\|274173	TIGR02515, Putative_DNA_transport_protein_HofQ, type IV pilus secretin (or competence protein) PilQ. A number of proteins homologous to PilQ are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). Members of this family include PilQ itself, which is a component of the type IV pilus structure, from a number of species. In Haemophilus influenzae, the member of this family is associated with competence for transformation with exogenous DNA rather than with formation of a type IV pilus; the surface structure required for competence may be considered an unusual, incomplete type IV pilus structure. [Cell envelope, Surface structures].	2.4103e-176
NZ_LS483496.1\|WP_050948866.1\|583635_584091_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	4.93976e-25
NZ_LS483496.1\|WP_005630954.1\|580102_580375_-\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	4.32312e-42
NZ_LS483496.1\|WP_050948865.1\|582673_583360_-\|ComF-family-protein	gnl\|CDD\|272958	TIGR00201, ComF_operon_protein_3, comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis. [Cellular processes, DNA transformation].	1.60603e-87
NZ_LS483496.1\|WP_021034387.1\|580513_581104_-\|YjaG-family-protein	gnl\|CDD\|225610	COG3068, COG3068, Uncharacterized protein conserved in bacteria [Function unknown].	2.41957e-114
NZ_LS483496.1\|WP_005652116.1\|590451_591297_+\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	gnl\|CDD\|225509	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only].	3.2119e-178
NZ_LS483496.1\|WP_005629464.1\|591449_591779_+\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	2.2841e-46
NZ_LS483496.1\|WP_050847365.1\|575170_575896_-\|fatty-acid-metabolism-transcriptional-regulator-FadR	gnl\|CDD\|163028	TIGR02812, Fatty_acid_metabolism_regulator_protein, fatty acid metabolism transcriptional regulator FadR. Members of this family are FadR, a transcriptional regulator of fatty acid metabolism, including both biosynthesis and beta-oxidation. It is found exclusively in a subset of Gammaproteobacteria, with strictly one copy per genome. It has an N-terminal DNA-binding domain and a less well conserved C-terminal long chain acyl-CoA-binding domain. FadR from this family heterologously expressed in Escherichia coli show differences in regulatory response and fatty acid binding profiles. The family is nevertheless designated equivalog, as all member proteins have at least nominally the same function. [Fatty acid and phospholipid metabolism, Biosynthesis, Fatty acid and phospholipid metabolism, Degradation, Regulatory functions, DNA interactions].	1.88471e-147
NZ_LS483496.1\|WP_021034389.1\|577574_578108_+\|disulfide-bond-formation-protein-DsbB	gnl\|CDD\|234979	PRK01749, PRK01749, disulfide bond formation protein DsbB.	8.16894e-84
NZ_LS483496.1\|WP_021034385.1\|582001_582598_-\|Fe-S-biogenesis-protein-NfuA	gnl\|CDD\|183027	PRK11190, PRK11190, iron-sulfur cluster biogenesis protein NfuA.	9.20722e-152
NZ_LS483496.1\|WP_050948872.1\|587774_590375_+\|penicillin-binding-protein-1A	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	0
NZ_LS483496.1\|WP_021034388.1\|578161_579994_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_LS483496.1\|WP_050948871.1\|586878_587676_-\|pilus-assembly-protein-PilM	gnl\|CDD\|227306	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion].	1.6288e-07

>NZ_LS483496.1|WP_050948865.1|582673_583360_-|ComF-family-protein
MNFLNFRCIHCRGNLHIAKNGLCSGCQKQIKSFPYCGHCGAELQYYAQHCGNCLKQEPSWDKMVIIGHYVEPLSVLIHRFKFQNQFWIDRTLARLLYLAVRNAKRTHQLKLPEAIIPVPLYHFRQWRRGYNQADLLSRQLSRWLDIPNLNNIVKRVKHTHTQRGLSAKDRRQNLKNAFSLAVLKNEFPYHRVALVDDVITTGSTLNEISKLLRKLGVEEIQVWGLARA
>NZ_LS483496.1|WP_021034385.1|582001_582598_-|Fe-S-biogenesis-protein-NfuA
MEQATQQIAISDAAQAHFRKLLDTQEEGTNIRIFVVNPGMPNAECGVSYCPPNAVEESDVEMKYDTFSAFIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAILQFGGGCNGCSMVDVTLKDGVEKQLISLFPNELKGAKDITEHQRGEHSYY
>NZ_LS483496.1|WP_021034386.1|581139_581934_-|NAD(+)-diphosphatase
MKILQQDDFGYWLLTQGSNLYLVNNELPFGIAKDIDLEGLKAMQIGEWKNHPLWLVAEQINDEREYVSLRKLLSLPEDEFYILSRGVEINHFLKTHKFCGKCGHKTQQTQDELAVQCTHCGYRTYPVICPSIIVAVRRGHEILLANHKRHYSPNGGIYTTLAGFVEVGETFEQAVNREVFEETGISIKNLRYFGSQPWAFPNSQMVGFLADYESGEITLQESEIYDAQWFSYDQPLPELPPTGTIARKLIHATLELCKAENKRD
>NZ_LS483496.1|WP_021034387.1|580513_581104_-|YjaG-family-protein
MRNPIHKRLENLESWQHLTFMAALCERMAPNFKLFCQMNELSVEAKTYQNILNLVWEYLTIKDVKINFENQLEKLESIIPDVNDYDSFGVVPALDACQALAEILHAIIAGETLERAVEISLISLGTIRALLETETGRDWSESELKENEDIQTELDVQWQVYRLLKECEKRDIELILALKNEIRTEGISNIGIEFHQ
>NZ_LS483496.1|WP_005630954.1|580102_580375_-|HU-family-DNA-binding-protein
MNKTDLIDAIANAAELNKKQAKAALEATLDAITASLKEGEPVQLIGFGTFKVNERAARTGRNPQTGAEIQIAASKVPAFVSGKALKDAIK
>NZ_LS483496.1|WP_021034388.1|578161_579994_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGAVAQRDVAEILINGLHRLEYRGYDSAGVAVINKQNELQRIRCLGKVKALDEAVSEKPLIGGTGIAHTRWATHGEPSETNAHPHASGTFAVVHNGIIENHEELRELLKSRGYVFLSQTDTEVIAHLVEWEMRSTDSLLEAVQKSVKQLTGAYGMVVMDSRNPEHLVAARSGSPLVIGLGIGENFLASDQLALLSVTRRFIFLEEGDIAEITRRTVDIYDTHGNKAKREIHESNLENDAAEKGKFRHFMQKEIYEQPTALINTMEGRINHENVIVDSIGNGAKDILEKVEHIQIVACGTSYNAGMVARYWFESLAGVSCDVEIASEFRYRKFVTRPNSLLITLSQSGETADTLAALRLAKEKGYMAALTICNVAGSSLVRESDLAFMTRAGVEVGVASTKAFTTQLAALLMLVTALGKVKGHISAEKEREIIKAMQSLPAEIEKALAFDSEIEALAEDFAEKHHSLFLGRGEFYPIAVEASLKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKVKSNIEEVRARGGQLYVFADKEAGFTPSEGMKIITMPKVNDIVAPIFYTIPMQLLSYYVALIKGTDVDQPRNLAKSVTVE
>NZ_LS483496.1|WP_021034389.1|577574_578108_+|disulfide-bond-formation-protein-DsbB
MLALLKQFSEKRFVWFLLAFSSLALESTALYFQYGMGLQPCVLCVYERLAMIGLFVAGIIALLQPRVFILRLIALVLGLFSSIKGLLISFRHLDLQINPAPWKQCEFIPNFPETLPFHQWFPFIFNPTGSCNESQWSLFGLTMVQWLVVIFSLYVVILTLLLIAQVIKTRKQRRLFN
>NZ_LS483496.1|WP_111688865.1|576020_577565_+|Na(+)/H(+)-antiporter-NhaB
MTNTQAFMKNFLGASPDWYKLAIVVFLIINPIVFFFISPFIAGWLLVAEFIFTLAMALKCYPLQPGGLLAIEAIIIGMTNAKHVKAEIMANFEVILLLMFMVAGIFFMKQLLLYVFTKLLVKIRSKIALSIAFCFSAAFLSAFLDALTVVAVIISVAMGFYGVYHKVASGNNLIDAVDISDDRKIIEQQHEILEKFRAFLRSLMMHAGVGTALGGVMTVVGEPQNLIIAEQAKWNFMEFFLRMAPVTIPVFICGLLTCFLVEKFKLFGYGEKLPDEVWKILSDLDRTNSEKMSKQDKIKLGMQALIAIWLILGLAFHLAAVGLIGLSIIIFATSFTGVTDEHTSGKAFQESLPFTALLVVFFSVVAVIIDQKLFSPIIHFVLSAEENTQLALFYVFNGLLSSISDNVFVATVYINEAKAALTNGVIAPHQFELLSVAINTGTNLPSVATPNGQAAFLFLLTSSLSPLIRLSYGRMVYMALPYTIVLSIIGLLAIEFILPAATIWLASLGLILPI
>NZ_LS483496.1|WP_050847365.1|575170_575896_-|fatty-acid-metabolism-transcriptional-regulator-FadR
MQNNNDILKAQSPAALAEEYIVKSIWQDVFPAGSNLPSERDLADKIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNIWDAAGPNIIETLIALDMQSAPLIIDNMLSLRSKMSESYIYEAVKNSPQKSAALFAELGQLQNTAQDYTEFDYQLFRQFTVVANKPFYRLIFNSLKGVYQRIGLLFFKEKTHRELTKQFYLEMQQICLEGNADAVVDCIRKNNLRSSTYWKAILERLPQNLSD
>NZ_LS483496.1|WP_050948864.1|573758_575126_+|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MLINKTKRAEQNLNNLPFLALQAEQIEFLGSPAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQENPHLDVKILIDWHRAQRNLLGAEKSATNADWYCEQRQTYQLPDDPNMFFGVPINTREVFGVLHVKGFVFDDTVLYSGASINNVYLHQLEKYRYDRYQKITHAELADSMVNFINDYLLDFSAVYPLDVTNRPRTKEIRSNIRIYRKDLAQNGKYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQEKLVICTPYFNFPRTLQHKIATLLENGKQVEIIVGDKVANDFYIPPEQPFKMVGALPYLYESNLRRFCEKFETQIERGQLVVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQQQLLAQVEKEQNQIRQHTKVLKYYTELEELNQYPEPVQKLLKKFARIKADKLVKMIL
>NZ_LS483496.1|WP_050948866.1|583635_584091_-|IS200/IS605-family-transposase
MSYCRLFYHIVFRTKDSVYAINEENEKILYDYIWGFVKSHHSILHRINGMPDHLHLFVELHQTISVAEFVRKLKKSTHRFLDENKPLFPEFTAWSVGYCALTYSDSDKYQLINYIKNQKQHHKETHFNDEMKSLFQREGIDFNVEWFERNV
>NZ_LS483496.1|WP_050948867.1|584087_585431_-|type-IV-pilus-secretin-PilQ
MKKYFLKCGYFLVCFCLPLIVFANPKTDNERFFIRLSQAPLAQTLEQLAFQQDVNLVMDEALESNISLRLDNIDMPRLLQIIAKSKKLTLNKDEGIYYLNGGQSGKGQVAGNLTTNEPHLMSHTVKLHFAKASELMKSLTTGSGSLLSSAGSITFDDRSNLLVIQDEPRSVQNIKKLIAEMDKPIEQIAIEARIVTITDESLKELGVRWGIFNPTENAARVAGSLSGNSFENIADNLNVNFATTTTPAGSIALQVAKINGRLLDLELSALERENNVEIIASPRLLTTNKKSASIKQGTEIPYIVSNTRNDTQSVEFREAVLGLEVTPHISKDNNILLDLLVSQNSPGSRVSYGQNEVVSIDKQEINTQVFAKDGETIVLGGVFHDTITKSEDKVPLLGDIPVIKRLFSKESERHQKRELVIFVTPHILKAGETLEALKQKSAGKKLQ
>NZ_LS483496.1|WP_050948868.1|585440_585854_-|pilus-assembly-protein-PilP
MKYWFFLTVLLFINCSWGQDPFDKTQRNRSQFDNAQTVMEQTEIISSDVPNNLCGADENRQAAEIPLNALKLVGVVISKDKAFALLQDQGLQVYSILEGVDVAQEGYIVEKIDQNNVQFMRKLGEQCDSSEWKKLSF
>NZ_LS483496.1|WP_050948869.1|585850_586372_-|hypothetical-protein
MKTFFNDPFTPFGKWLSQPVYIQSLTFLLLLSAVIFRPVLDYIEASEHFAETEYELAKKSSELLHQQKILTSLQQQSESRKLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQQPILHLQLIGHFEKTKTFLTALLANTSQLSVSRLQFMKPEDSPLQTEIIFQLEKETK
>NZ_LS483496.1|WP_050948870.1|586368_586878_-|hypothetical-protein
MSMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQDLQAQQTSFEQLNQQLYKTAKKIEQLRSAVQVGEILTSIPKEQVKKSLQRLSELPFQQGELNKFKQDAHNLSLEGLAQDQREFELIHQFLKKHFPNVKLSQFQPEQQSLYFLFDVEQVGEDK
>NZ_LS483496.1|WP_050948871.1|586878_587676_-|pilus-assembly-protein-PilM
MQFSLKNYLTLQIGIHRKQSYFDFVWFDDLEQPQSYQIFVNDRDFKNRFLQQLKTQYQGKTFPLQFVASIPAHLTWSKVLMLPQVLNAQECHQQCKFVLEKELPISLDELWFDYRSTPLKQGFRLDVTAIRKSTAQTYLQDFQPFKINVLDVASNAILRAFQYLLNEQVRSENSLFLFQEDDYCLAICERSQQSQILQSHENLTALYEQFTERFEGQLEQVFVYQIPSSHTPLPEHWQRVETELPFIALGNALWQKDLYQQKVDN
>NZ_LS483496.1|WP_050948872.1|587774_590375_+|penicillin-binding-protein-1A
MRIAKLILSTLLTLCILGLVAGGMLYFYLKSELPSVETLKTVELQQPMQIYTADGKLIGEVGEQRRIPVKLADVPQRLIDAFLATEDSRFYEHHGLDPIGIARALFVVVSNGGASQGASTITQQLARNFFLTPEKTIIRKAREAVLAVEIENTLNKQEILELYLNKIFLGYRSYGVAAAAQTYFGKALNELTLSEMAIIAGLPKAPSTMNPLYSLKRSEERRNVVLSRMLDEKYISKEEYDAALKEPIVASYHGAKFEFRADYVTEMVRQEMVRRFGEENAYTSGYKVFTTVLSKDQDEAQKAVRNNLIDYDMRHGYRGGAPLWQKNEAAWDNDRIVGFLRKLPDSEPFIPAAVIGIVKGGADILLASGEKMTLSTNAMRWTGRSNPVKVGEQIWIRQRANGEWQLGQIPSANSALVSLNSDNGAIEAIVGGFSYEQSKFNRATQSLVQVGSSIKPFIYAAALEKGLTLSSVLQDSPISIQKPGQKLWQPKNSPDRYDGPMRLRVGLGQSKNMIAIRAIQTAGIDFTAEFLQRFGFKRDQYFASEALALGAASFTPLEMARAYSVFDNGGFLIEPYIIEKIQDNTGKELFAANPKIACIECNDIPVIYGETKDKINGFANIPLGENALKPTDDSTNGEELDQQPETVPELPELQSNFTALKEDAIDLMAAAKNASSKIEYAPRVISGELAFLIRSALNTAIYGEQGLDWKGTSWRIAQSIKRSDIGGKTGTTNSSKVAWYAGFGANLVTTTYVGFDDNKRVLGRGEAGAKTAMPAWITYMKTALSDKPERKLTLPPKIVEKSIDTFTGLLSPNGGRKEYFIVGTEPTRTYLSEMQERGYYVPTELQQRLNNEGNTPTPAAQPEELF
>NZ_LS483496.1|WP_005652116.1|590451_591297_+|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ
MLSYRHSFHAGNHADVLKHIVLMLILENLKLKEKGFFYLDTHSGVGRYRLSSNESEKTGEYKEGIGRLWDQTDLPEDVARYVKMIKKLNYGGKELRYYAGSPLIAAELLRPQDRALLTELHPSDYPILRNNFSDDKNVTVKCDNGFQQVKATLPPKERRGLVLIDPPYELKEDYDLVVKAIEEGYKRFATGTYAIWYPVVLRQQTKRIFKGLEATGIRKILKIELAIRPDSDQRGMTASGMVVINPPWTLETQMKEILPYLTKTLVPEGTGSWTVEWITPE
>NZ_LS483496.1|WP_005629464.1|591449_591779_+|YbaB/EbfC-family-nucleoid-associated-protein
MFGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAGMPLPPGMKFPF
>NZ_LS483496.1|WP_005641249.1|591911_592514_+|recombination-protein-RecR
MQSSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLAQALTEAMSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

111749 : 121929

Bacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111688741.1\|111749_112766_+	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	5.6e-73	44.6
WP_005648317.1\|112831_113245_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_050948716.1\|113295_113979_+	response regulator	W8CYM9	Bacillus_phage	3.4e-34	39.3
WP_076773679.1\|114074_114422_+	hypothetical protein	W8CYF6	Bacillus_phage	1.1e-09	36.1
WP_111688742.1\|114454_115426_-	elongation factor P--(R)-beta-lysine ligase	A0A2K9L3L6	Tupanvirus	3.1e-28	27.1
WP_021034728.1\|115636_117436_+	fumarate reductase (quinol) flavoprotein subunit	M1HTN0	Paramecium_bursaria_Chlorella_virus	3.8e-16	24.9
WP_005639269.1\|117428_118199_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
WP_061671283.1\|118209_118620_+	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_061671284.1\|118631_118976_+	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_061671285.1\|119082_119823_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
WP_041175277.1\|119809_120115_-	trp operon repressor	NA	NA	NA	NA
WP_111688743.1\|120147_121929_-	transglycosylase SLT domain-containing protein	K4NWI2	Pseudomonas_phage	2.6e-17	39.5

DBSCAN-SWA_2

1033119 : 1106143

Mannheimia_phage(28.57%)

head,protease,terminase,portal,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050949374.1\|1033119_1033635_-\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_050949375.1\|1033923_1035078_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.5e-127	63.0
WP_050949376.1\|1035588_1036053_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_050949377.1\|1036071_1036857_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_050949378.1\|1036893_1038693_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.9e-44	24.7
WP_050949379.1\|1038886_1039906_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_021035427.1\|1040156_1040783_+	guanylate kinase	K4JYM5	Abalone_herpesvirus	7.5e-20	35.6
WP_042593663.1\|1040845_1041112_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_050949380.1\|1041403_1043518_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	2.5e-11	38.8
WP_061671345.1\|1043514_1045596_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_061671346.1\|1045625_1046435_+	glutamate racemase	NA	NA	NA	NA
WP_050949383.1\|1046645_1047791_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA
WP_050949451.1\|1053853_1054783_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_050949450.1\|1054792_1055512_+	azaleucine resistance protein AzlC	NA	NA	NA	NA
WP_005670246.1\|1055508_1055838_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_050949449.1\|1055940_1056174_+	YgjV family protein	NA	NA	NA	NA
WP_050847486.1\|1056249_1057830_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	3.3e-32	26.1
WP_038439640.1\|1058159_1058948_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005670257.1\|1059027_1061007_+	exoribonuclease II	Q0GXV6	Lactococcus_phage	3.8e-25	25.1
WP_111688983.1\|1061386_1066870_+	YadA-like family protein	NA	NA	NA	NA
WP_077643924.1\|1067106_1067748_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
WP_050949446.1\|1067744_1068674_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
WP_077643925.1\|1068660_1069398_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA
WP_021035413.1\|1069441_1070635_+	divalent metal cation transporter	NA	NA	NA	NA
WP_105880424.1\|1070715_1072050_-	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	2.2e-53	79.4
WP_050949443.1\|1072226_1073099_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	4.3e-50	35.7
WP_050949442.1\|1073264_1075613_-	penicillin-binding protein 1B	NA	NA	NA	NA
WP_021035409.1\|1075619_1075973_-	YacL family protein	NA	NA	NA	NA
WP_021035408.1\|1075974_1076319_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	1.7e-26	48.6
WP_050949441.1\|1076454_1077261_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_050949440.1\|1077353_1079945_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
WP_110431036.1\|1080733_1081801_+	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA	NA	NA	NA
WP_111688984.1\|1082098_1082647_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.7e-29	40.7
WP_050949438.1\|1082717_1083758_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_005654341.1\|1083915_1084173_+	phosphocarrier protein Hpr	NA	NA	NA	NA
WP_050949437.1\|1084252_1085980_+	phosphoenolpyruvate-protein phosphotransferase PtsI	NA	NA	NA	NA
WP_005688036.1\|1086039_1086540_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_005689745.1\|1086677_1086773_+	hypothetical protein	NA	NA	NA	NA
WP_005688032.1\|1086887_1087253_+	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	5.9e-09	34.2
WP_005688031.1\|1087316_1087982_+	response regulator	NA	NA	NA	NA
WP_005689743.1\|1087978_1089334_+	two-component system sensor histidine kinase QseC	W8CYF6	Bacillus_phage	2.1e-14	26.8
WP_050949436.1\|1089599_1091627_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.6e-18	24.8
WP_111688985.1\|1091663_1093139_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	4.2e-45	35.2
WP_005664886.1\|1093245_1094349_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_050949435.1\|1094345_1095422_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_111688986.1\|1095615_1097886_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_061671239.1\|1098533_1099544_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	6.2e-117	60.4
WP_050949432.1\|1101409_1102459_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	1.4e-87	50.7
WP_050949431.1\|1102470_1103121_+\|terminase	terminase	Q19US0	Mannheimia_phage	3.5e-44	45.5
WP_050949430.1\|1103413_1103920_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	8.1e-33	51.0
WP_005653052.1\|1103919_1104129_+\|tail	tail protein X	A0A0M3LPY0	Mannheimia_phage	4.7e-11	45.3
WP_005689816.1\|1104130_1104352_+	hypothetical protein	NA	NA	NA	NA
WP_050949429.1\|1104344_1104863_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	1.5e-37	47.7
WP_050949428.1\|1104847_1105198_+	chemotaxis protein	NA	NA	NA	NA
WP_172452333.1\|1105372_1105570_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_050949427.1\|1105720_1106143_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	2.1e-18	50.9

DBSCAN-SWA_3

1270782 : 1374756

Mannheimia_phage(32.43%)

plate,head,protease,terminase,portal,tRNA,tail,lysis,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050949157.1\|1270782_1271235_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.5e-25	56.1
WP_111689022.1\|1271270_1273148_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_050949159.1\|1273189_1274080_-	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_111689023.1\|1274079_1274349_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_111689024.1\|1274507_1275965_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_111689025.1\|1275980_1276301_+	YqcC family protein	NA	NA	NA	NA
WP_111689026.1\|1276294_1277014_+\|tRNA	tRNA pseudouridine(65) synthase TruC	NA	NA	NA	NA
WP_111689027.1\|1277006_1277165_+	YoaH family protein	NA	NA	NA	NA
WP_021035241.1\|1277311_1277530_+	cold shock domain-containing protein CspD	Q9AZD3	Lactococcus_phage	2.2e-11	53.1
WP_005628871.1\|1277597_1278044_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_061671208.1\|1278170_1279946_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_005652828.1\|1280115_1280649_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_050949164.1\|1280884_1281613_+	hypothetical protein	NA	NA	NA	NA
WP_005652821.1\|1281879_1282149_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_050949165.1\|1282876_1284316_-	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_050949166.1\|1284479_1284956_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_005674664.1\|1284995_1285295_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_050949167.1\|1285421_1286051_+	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_038441262.1\|1286141_1288049_+\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	5.0e-115	42.5
WP_038441260.1\|1288160_1288988_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.4e-13	27.5
WP_050847626.1\|1289025_1290363_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	2.9e-13	23.4
WP_050847627.1\|1290421_1290916_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_172452354.1\|1291128_1291692_+	histone	NA	NA	NA	NA
WP_111689029.1\|1291768_1293133_-	TolC family protein	NA	NA	NA	NA
WP_050949171.1\|1293849_1295517_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.3e-254	77.2
WP_050949172.1\|1295594_1296047_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_172452355.1\|1296117_1298208_+	4-alpha-glucanotransferase	NA	NA	NA	NA
WP_050949174.1\|1298217_1300413_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_111689031.1\|1300560_1302540_+	glycogen debranching protein GlgX	NA	NA	NA	NA
WP_046067810.1\|1302562_1303864_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_111689032.1\|1303971_1305402_+	glycogen synthase GlgA	NA	NA	NA	NA
WP_111689033.1\|1305648_1308114_+	glycogen/starch/alpha-glucan phosphorylase	A0A140XAG6	Dickeya_phage	5.0e-19	54.2
WP_154685861.1\|1308181_1308352_+	DUF5384 family protein	NA	NA	NA	NA
WP_050949179.1\|1309097_1309871_-	fumarate/nitrate reduction transcriptional regulator Fnr	NA	NA	NA	NA
WP_077553340.1\|1311462_1311753_-	hypothetical protein	A0A0M3LQ35	Mannheimia_phage	5.0e-11	42.4
WP_111689034.1\|1312303_1312798_-	hypothetical protein	NA	NA	NA	NA
WP_111689035.1\|1312817_1314998_-	replication endonuclease	Q94N00	Haemophilus_virus	2.4e-174	45.0
WP_111689036.1\|1315017_1315299_-	hypothetical protein	Q775F7	Haemophilus_virus	2.6e-20	55.9
WP_111689037.1\|1315621_1315873_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_111689038.1\|1315887_1316082_-	hypothetical protein	NA	NA	NA	NA
WP_111689039.1\|1316065_1316494_-	hypothetical protein	NA	NA	NA	NA
WP_111689040.1\|1316508_1316778_-	hypothetical protein	NA	NA	NA	NA
WP_111689041.1\|1316843_1317248_-\|tail	phage tail protein	Q19UQ3	Mannheimia_phage	1.7e-28	48.8
WP_111689042.1\|1317250_1317790_-\|tail	phage tail protein I	Q19UQ4	Mannheimia_phage	1.4e-51	55.2
WP_111689043.1\|1317779_1318694_-\|plate	baseplate J/gp47 family protein	Q19UQ5	Mannheimia_phage	8.5e-97	61.2
WP_111689044.1\|1318690_1319029_-	GPW/gp25 family protein	Q19UQ6	Mannheimia_phage	5.8e-19	49.5
WP_111689045.1\|1319028_1319568_-\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.7e-39	58.0
WP_111689046.1\|1319681_1322387_-\|tail	phage tail tape measure protein	V5YUN9	Pseudomonas_phage	1.1e-75	33.5
WP_172452356.1\|1322457_1322610_+	hypothetical protein	NA	NA	NA	NA
WP_111689047.1\|1322663_1323131_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	4.3e-28	45.2
WP_111689048.1\|1323145_1323358_-	TraR/DksA C4-type zinc finger protein	F1BUS2	Erwinia_phage	9.0e-10	50.0
WP_111689049.1\|1323505_1323829_-	chemotaxis protein	NA	NA	NA	NA
WP_111689050.1\|1323813_1324332_-	lysozyme	A0A0M3LQY4	Mannheimia_phage	2.6e-34	46.8
WP_111689051.1\|1324312_1324540_-\|lysis	lysis protein	NA	NA	NA	NA
WP_077474920.1\|1324544_1324754_-\|tail	tail protein X	R4JDL4	Burkholderia_phage	1.6e-06	46.3
WP_111689052.1\|1324753_1325263_-\|head	head completion/stabilization protein	A0A0M3LPQ0	Mannheimia_phage	1.5e-31	47.0
WP_111689053.1\|1325382_1326033_-\|terminase	terminase	Q19US0	Mannheimia_phage	1.1e-45	46.1
WP_111689054.1\|1326037_1327078_-\|capsid	phage major capsid protein, P2 family	E5E3W8	Burkholderia_phage	4.5e-94	53.1
WP_111689055.1\|1327137_1327965_-\|capsid	GPO family capsid scaffolding protein	Q19UT4	Mannheimia_phage	1.1e-71	55.4
WP_111689056.1\|1328131_1329910_+\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	1.8e-215	64.7
WP_111689057.1\|1329919_1330930_+\|portal	phage portal protein	Q19UT6	Mannheimia_phage	8.7e-119	61.1
WP_050949180.1\|1331608_1332628_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_050949181.1\|1332627_1333452_+	PHP domain-containing protein	NA	NA	NA	NA
WP_050847104.1\|1333547_1334156_-	chalcone isomerase family protein	NA	NA	NA	NA
WP_050949182.1\|1334283_1335678_-	class II fumarate hydratase	NA	NA	NA	NA
WP_050949183.1\|1335913_1336348_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_011961939.1\|1336432_1336603_+	hypothetical protein	NA	NA	NA	NA
WP_050949184.1\|1336592_1337186_+	zeta toxin family protein	NA	NA	NA	NA
WP_050949185.1\|1337212_1337527_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_111689058.1\|1337549_1338188_+	NgoFVII family restriction endonuclease	NA	NA	NA	NA
WP_111689059.1\|1338235_1341100_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	4.6e-149	37.5
WP_050949188.1\|1341134_1341410_-	hydrogenase maturation factor HybG	NA	NA	NA	NA
WP_050949189.1\|1341540_1342971_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	5.5e-34	38.3
WP_050949190.1\|1343001_1344003_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	9.4e-49	37.1
WP_050949191.1\|1344055_1344442_-	tautomerase family protein	NA	NA	NA	NA
WP_050847113.1\|1344490_1345072_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.0e-34	39.4
WP_111689060.1\|1345084_1346641_-	anthranilate synthase component I	A0A0B5J984	Pandoravirus	4.7e-23	33.2
WP_050949194.1\|1347023_1347521_-	non-heme ferritin	NA	NA	NA	NA
WP_041175333.1\|1347536_1348025_-	non-heme ferritin	NA	NA	NA	NA
WP_050949195.1\|1348585_1348813_+	hypothetical protein	NA	NA	NA	NA
WP_076773452.1\|1348938_1349943_+	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	5.3e-52	40.1
WP_050949197.1\|1350033_1350981_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_021035193.1\|1350982_1351831_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_021035192.1\|1351840_1352608_+	phosphate ABC transporter ATP-binding protein PstB	G3M9Y6	Bacillus_virus	7.3e-17	30.5
WP_050847118.1\|1352684_1353380_+	phosphate regulon transcriptional regulator PhoB	NA	NA	NA	NA
WP_050949198.1\|1353376_1354642_+	phosphate regulon sensor histidine kinase PhoR	W8CYF6	Bacillus_phage	1.6e-24	31.0
WP_162624071.1\|1354868_1355009_-	hypothetical protein	NA	NA	NA	NA
WP_050949199.1\|1355462_1356884_-	exodeoxyribonuclease I	NA	NA	NA	NA
WP_050949200.1\|1356896_1357772_-	DMT family transporter	NA	NA	NA	NA
WP_021035187.1\|1357775_1358684_-	hypothetical protein	NA	NA	NA	NA
WP_111689061.1\|1358753_1363286_-	chromosome partition protein MukB	NA	NA	NA	NA
WP_005637804.1\|1363285_1364020_-	chromosome partition protein MukE	NA	NA	NA	NA
WP_111689062.1\|1364168_1365503_-	chromosome partition protein MukF	NA	NA	NA	NA
WP_111689063.1\|1365652_1366585_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.3e-121	80.5
WP_111689064.1\|1366586_1366916_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	5.8e-24	51.9
WP_005631673.1\|1367034_1367244_+	molybdenum-pterin-binding protein	NA	NA	NA	NA
WP_111689065.1\|1367406_1369818_+	TonB-dependent receptor	NA	NA	NA	NA
WP_111689066.1\|1369921_1372702_+	insulinase family protein	NA	NA	NA	NA
WP_050949207.1\|1372824_1374756_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.8e-131	38.4

DBSCAN-SWA_4

1767905 : 1787236

Haemophilus_phage(60.0%)

plate,head,protease,terminase,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005659320.1\|1767905_1769750_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-28	28.1
WP_005651690.1\|1769875_1770154_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_111689165.1\|1770596_1772240_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	5.9e-250	78.6
WP_111689166.1\|1772243_1773881_+	DUF935 domain-containing protein	B7SDN1	Haemophilus_phage	3.6e-199	66.4
WP_111689167.1\|1773867_1775145_+\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	1.8e-121	52.7
WP_111689168.1\|1775255_1775741_+	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	1.3e-32	50.3
WP_050948602.1\|1775994_1777044_+\|protease	phage protease	B7SDN9	Haemophilus_phage	2.5e-108	61.0
WP_050948603.1\|1777043_1777964_+\|head	Mu-like prophage major head subunit gpT family protein	B7SDP1	Haemophilus_phage	7.9e-127	71.9
WP_050948604.1\|1778003_1778309_+	hypothetical protein	B7SDP3	Haemophilus_phage	1.6e-20	50.0
WP_111689169.1\|1778318_1778750_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	6.1e-37	60.9
WP_050845935.1\|1778733_1779396_+	DUF1834 family protein	A0A0M3LQJ7	Mannheimia_phage	9.3e-45	45.0
WP_172452373.1\|1779403_1780858_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0M3LQC3	Mannheimia_phage	2.3e-149	63.6
WP_050948606.1\|1780867_1781239_+	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	6.8e-37	65.0
WP_021034874.1\|1781238_1781580_+	hypothetical protein	A0A0M3LSI2	Mannheimia_phage	1.8e-20	50.5
WP_021034873.1\|1781594_1781801_+	hypothetical protein	NA	NA	NA	NA
WP_050948608.1\|1784138_1785473_+	DNA circularization N-terminal domain-containing protein	F6MIL2	Haemophilus_phage	1.4e-108	45.6
WP_050948609.1\|1786600_1787236_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	1.6e-62	57.2

DBSCAN-SWA_5

1818504 : 1827051

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050948629.1\|1818504_1819158_+	ABC transporter ATP-binding protein	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	3.2e-05	25.7
WP_050948630.1\|1819948_1820227_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_050948631.1\|1820236_1820599_-	hypothetical protein	NA	NA	NA	NA
WP_050948632.1\|1820573_1821683_-	transglutaminase family protein	NA	NA	NA	NA
WP_061671258.1\|1821935_1824359_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	9.1e-223	50.6
WP_038441398.1\|1824369_1824987_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.8e-73	57.8
WP_111689175.1\|1824988_1825828_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	8.5e-19	31.1
WP_005686307.1\|1825939_1826551_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.3e-21	32.5
WP_111689176.1\|1826550_1827051_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	1.5e-10	30.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage