CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR215729	Pseudomonas marincola strain YSy11 chromosome PMYSY11	2 crisprs	DEDDh,cas3,RT,csa3,WYL,DinG	0	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR215729_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR215729_1

1943621-1943770

Orphan

Consensus_repeat	Method
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACTGGTGCGTAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR215729_1

>merge|NZ_LR215729|1|1943621-1943770|CRISPRCasFinder
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACTGGTGCGTAATTGTTGCGGCGGCCTATTTGACCACTAGCTGTCACCCTTCTCAACTCGAGGAGTATTGCCTTCGGAGGGCAGTACTCTATCCAGCTGAGCTACTGGTGCGTAAT

>NZ_LR215729|1|1|1943621-1943770|CRISPRCasFinder
GCCTTCGGAGGGCGGTACTCTATCCAGCTGAGCTACTGGTGCGTAAT	TGTTGCGGCGGCCTATTTGACCACTAGCTGTCACCCTTCTCAACTCGAGGAGTATT
GCCTTCGGAGGGCAGTACTCTATCCAGCTGAGCTACTGGTGCGTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR215729.1\|WP_150548067.1\|1953194_1953710_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239268
NZ_LR215729.1\|WP_034021837.1\|1942436_1943213_-\|ATPase	unknown	unknown	gnl\|CDD\|274376
NZ_LR215729.1\|WP_150549634.1\|1947257_1950065_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|182070
NZ_LR215729.1\|WP_150548065.1\|1945905_1947186_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236149
NZ_LR215729.1\|WP_069902237.1\|1951800_1953198_+\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|271357
NZ_LR215729.1\|WP_042920397.1\|1928050_1928371_-\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_LR215729.1\|WP_004424187.1\|1928690_1929698_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_LR215729.1\|WP_042921414.1\|1934995_1935940_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|99782
NZ_LR215729.1\|WP_073675587.1\|1933902_1934931_-\|DUF3445-domain-containing-protein	unknown	unknown	gnl\|CDD\|378763
NZ_LR215729.1\|WP_150548066.1\|1950811_1951789_+\|arsenosugar-biosynthesis-radical-SAM-protein-ArsS	unknown	unknown	gnl\|CDD\|275025
NZ_LR215729.1\|WP_150549633.1\|1931006_1932506_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_LR215729.1\|WP_011913346.1\|1937415_1938501_+\|IS5-like-element-ISPst12-family-transposase	unknown	unknown	gnl\|CDD\|377531
NZ_LR215729.1\|WP_150548068.1\|1953712_1954684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR215729.1\|WP_069902235.1\|1950266_1950683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR215729.1\|WP_090514399.1\|1944208_1945657_+\|NADP-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183050
NZ_LR215729.1\|WP_150548064.1\|1941867_1942437_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR215729.1\|WP_150548069.1\|1954680_1956822_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235787
NZ_LR215729.1\|WP_073675586.1\|1933471_1933834_-\|aminomethyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|376569
NZ_LR215729.1\|WP_073675588.1\|1935936_1936482_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99782
NZ_LR215729.1\|WP_090514376.1\|1956821_1957535_+\|DUF3047-domain-containing-protein	unknown	unknown	gnl\|CDD\|378613

Protein	Function_ID	Function_description	E-value
NZ_LR215729.1\|WP_150548067.1\|1953194_1953710_+\|redoxin-domain-containing-protein	gnl\|CDD\|239268	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.	5.11477e-19
NZ_LR215729.1\|WP_034021837.1\|1942436_1943213_-\|ATPase	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	0.000186432
NZ_LR215729.1\|WP_150549634.1\|1947257_1950065_-\|EAL-domain-containing-protein	gnl\|CDD\|182070	PRK09776, PRK09776, putative diguanylate cyclase; Provisional.	6.8364e-89
NZ_LR215729.1\|WP_150548065.1\|1945905_1947186_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236149	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_LR215729.1\|WP_042920397.1\|1928050_1928371_-\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	1.86415e-19
NZ_LR215729.1\|WP_004424187.1\|1928690_1929698_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_LR215729.1\|WP_042921414.1\|1934995_1935940_-\|oxidoreductase	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	2.28792e-90
NZ_LR215729.1\|WP_073675587.1\|1933902_1934931_-\|DUF3445-domain-containing-protein	gnl\|CDD\|378763	pfam11927, DUF3445, Protein of unknown function (DUF3445). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 264 to 418 amino acids in length. This protein has a conserved RLP sequence motif. This protein has two completely conserved R residues that may be functionally important.	2.49133e-75
NZ_LR215729.1\|WP_150548066.1\|1950811_1951789_+\|arsenosugar-biosynthesis-radical-SAM-protein-ArsS	gnl\|CDD\|275025	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein. Members of this protein family have an N-terminal radical SAM domain (pfam04055) and a C-terminal pfam12345 domain. The C-terminal region has several conserved Cys residues, one of which is replaced by selenocysteine in at least five bacterial reference genomes.	0
NZ_LR215729.1\|WP_150549633.1\|1931006_1932506_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.9917e-15
NZ_LR215729.1\|WP_011913346.1\|1937415_1938501_+\|IS5-like-element-ISPst12-family-transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	4.81349e-24
NZ_LR215729.1\|WP_090514399.1\|1944208_1945657_+\|NADP-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|183050	PRK11241, gabD, NADP-dependent succinate-semialdehyde dehydrogenase I.	0
NZ_LR215729.1\|WP_069902237.1\|1951800_1953198_+\|sodium:solute-symporter	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	2.77333e-19
NZ_LR215729.1\|WP_150548069.1\|1954680_1956822_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|235787	PRK06370, PRK06370, FAD-containing oxidoreductase.	3.99626e-152
NZ_LR215729.1\|WP_073675586.1\|1933471_1933834_-\|aminomethyl-transferase-family-protein	gnl\|CDD\|376569	pfam01571, GCV_T, Aminomethyltransferase folate-binding domain. This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.	2.60795e-29
NZ_LR215729.1\|WP_073675588.1\|1935936_1936482_-\|hypothetical-protein	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	0.000527002
NZ_LR215729.1\|WP_090514376.1\|1956821_1957535_+\|DUF3047-domain-containing-protein	gnl\|CDD\|378613	pfam11249, DUF3047, Protein of unknown function (DUF3047). This bacterial family of proteins has no known function.	9.46827e-60

>NZ_LR215729.1|WP_034021837.1|1942436_1943213_-|ATPase
MARPLRKIKLDGTLYQRRPAVEAEIHDLTAVSPSELERRASICSRTSPGFVSPEVLVHFVRNVGAGMHRERLTELLLQRVYLLLPRAENAGEATASLTKTNIRDDVVDHFVDLLLSDRASYDDRLDYYEINFNSAIAKDRKDASDRHWKRDSQSEELGTDEDGAYNALDEAIGGYDPFDPRELDEKFYRLRLDEEIDSLPELQRRIVEMWRQEIPIDSQDPSVVTISKALGKSEKTIRTHRDKAFATLRLRLERKGGL
>NZ_LR215729.1|WP_150548064.1|1941867_1942437_-|hypothetical-protein
MTKRSPISSEDVMNAFAMDFEPGSEVLKKYLADYPQFAADLVDLARELSRQVDEDLPLSAQELAAVSAKMGRLRESVVTVEILQAASPRTFALAAKALGLPMQVGVAIRERRIDVATLPSRFLERLANALQTSVSVVQSFLLLPAQASALRANKSDDKPAPAEKVPFERLLREAGMDEERISRLLHGDD
>NZ_LR215729.1|WP_011913346.1|1937415_1938501_+|IS5-like-element-ISPst12-family-transposase
MRGLDLKQNELFSYTTLEQRIPNDHPLRPLRGLVDTVLASMDRDFDGLYSTLGRASIAPERLLRASLLQVIYTIRSERQLVEQIDFNLLFRWFVGLSMDERMWDHSTFSQNRDRLFNQDVARLFFQRIKSLAAWSEYASNEHFSVDGTLIDAWASHKSFIKKDGGDPPEDGTRNPDADFKGEKRSNATHQSTSDPEARLARKSNGDASRLAHMAHTMMEHRNGLIVDVECTEFNGRAEVEAALEMLERTAKPGSTVGADKNYDQKRFVQRARELKVTPHVAQKRKGSAIDGRTTRHPGYAASQKIRKRIEEGFGWLKTVGGLRKTKLIGRAKLSAQLLLGFSVYNLIRLGSLSGWWRGSHV
>NZ_LR215729.1|WP_073675588.1|1935936_1936482_-|hypothetical-protein
MTASSAEPMFSTPRYATEVSRHTASRRIVVAQQASLATRLLHHPAPTLLLCLGETLPGSVEQESLPSSEALYLRLQMLLEQAQAGTRLYVCGDESFLWHVHRLARQAGLLGDEIELFKQGARRRLYCVHCGHIQDIGSEGECTCGQCRVKLFVREHFSQRLGAYMGVCIDPDSPYAPEVRS
>NZ_LR215729.1|WP_042921414.1|1934995_1935940_-|oxidoreductase
MSAMIEVQVTDVRQLTPVVREFSFRAIDGTLPGFSCGSHVQVILPTEGRTLRNAYSLLGDPRDTGAYRIAVRLQEASRGGSRYLHEQVRVGDRLQIGAPSNLFALHSQARHHILVAGGIGITPFMAYLAELGAQGASFELHYAYRSGLTDAYAGELRERLGERFHGYDAAAGQRLDCTSLFAGKPLGSHLYVCGPQRLLDELKTLAGAHGWSDGRLHWEAFAAPEPGQPFTVELARSGQRLQVPGDHSLLEALEAAGVEVPNLCRGGVCGQCTTRYLSGEVEHRDHYLDEQQRGEALMPCVSRGGCRGTLLLDL
>NZ_LR215729.1|WP_073675587.1|1933902_1934931_-|DUF3445-domain-containing-protein
MPVVMKPVETYRDDFTFSNSPQAIARFPFPFPEDSYMYSVNIEPATPREPGSVFEHWFDIDEHYVSEMAERARVLERDPQRCLMMPHMAQAAWDTLEMLMEHLAADYPEHFALQREGDRWLWINRPLGIEQRFTFGDASTLPYEPLEYITRQAQGDFAVLDQRDGDLFMDAGMVTFAPNWSIKFDAGMSFKQWHAPVPGVAHQLGVFDRALKYLLNIQVGQPVRRLSWTMTINPRLDISSETFHEWGHELGLVTPENVARLVHLHVELQFMPRLPRSNALLFGFRHYLISLEELATNPAWACRLHRVLRDLPDEIADYKGLTRYRQTVVDWLRQFDPQAQAA
>NZ_LR215729.1|WP_073675586.1|1933471_1933834_-|aminomethyl-transferase-family-protein
MPSVTAHWVPSSRTGAAWGPPGPMPSDLADEHEAIRTRAGLMDVSGLKKVHYVGPHAESLLEYATSRDISKVYPGKSVYATMLNEAGKFVDDCVIYRTGPNAFMVVHGSGSGHVLALMEN
>NZ_LR215729.1|WP_150549633.1|1931006_1932506_+|IS21-family-transposase
MEMMGKIRRMYFRDKLSLHEIAKRTGLARNTIRKWVRAPEAKPPVYQRRAIFNKLSPFHATLEQALKADSLRPKQQRRSAKALLAQIKAEGYDGGYSQLTAFIRAWRGGQGKASQAFVPLTFALGEAFQFDWSEEGLLVGGIYRRMQVAHLKLCASRAFWLVAYPSQGHEMLFDAHTRSFGSLGGVPRRGIYDNMKTAVDKVNKGKGRTVNARFAVMCAHYLFDPDFCNVAAGWEKGIVEKNVQDSRRRIWLDAQDCQFHSFEELNAWLGQRCRALWNELTHPQYSGLSVAEVLELERAELMPVPAPFDGYVERPARVSSTCLVSVGRNRYSVPCEYAGKWVSSRLYPTRIEVVADDALIASHVRLLDRDQVSYDWQHYLPLIERKPGALRNGAPFADLPAPLRQLKHGLGRHAGGDRIMAQVLAAVPVAGLDAVLVAVELVLESGSLSAEHILNVVARLTASEPPPSVETHLSLKEAPVANTARYDRLRGQAEEVGHA
>NZ_LR215729.1|WP_004424187.1|1928690_1929698_-|nucleoid-associated-protein-YejK
MPIRHCIVHLIDKKPDGSPAVLHARDSELATSQAMENLLADLNESYNAKQGKAWGLFHEESGAYPFSGWLKAYLDGEQDFTAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTDALDVTPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSDYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEEQAREKTKTLVGYASGQAKLGEPITLEELSGLIDEERPKAFYEHIRNKDYGMAPEFPADKRTLSQFQRFTGRAEGLSISFEAHLLGSKIEYDEGRDMLIIRQLPTQLKDQLKRRQD
>NZ_LR215729.1|WP_042920397.1|1928050_1928371_-|glutaredoxin-family-protein
MKTIVLLLAALALWQNWDKIDRWLNPPQAGNASGEIVLYATQWCGYCAKTRELFAEDGIVYREVDIENDAAGRAQYQALGGQGVPVIDLRGQVIHGYDVRAIRAAY
>NZ_LR215729.1|WP_090514399.1|1944208_1945657_+|NADP-dependent-succinate-semialdehyde-dehydrogenase
MQLKDTQLFRQQAYIDGTWLDADNGQTIKVNNPATGEIIGTVPKMGAAETRRAIEAADRALPAWRALTAKERANKLRRWYELLIENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVMKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIKPASQTPFSALALVVLAERAGIPKGVLSVITGSAGDVGGELTSNPTVRKLSFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYIQDGVYDAFAEKLKAAVAKLNIGNGMEDGVTTGPLIDDKAVAKVQEHIEDAVGKGAKVLTGGKQHSLGGSFFEPTILVDVPRNAAVAKEETFGPLAPLFRFKDEADVIAMSNDTEFGLASYFYARDMGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLSI
>NZ_LR215729.1|WP_150548065.1|1945905_1947186_+|4-aminobutyrate--2-oxoglutarate-transaminase
MSKTNESLMQRRTAAVPRGVGQIHPIFAEKALNATVTDVEGREFIDFAGGIAVLNTGHLHPKVIAAVQEQLTKLSHTCFQVLAYEPYVEVCEKINAKVPGDFDKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGGYHGRTMMTLGLTGKVVPYSAGMGLMPGGVFRAQYPCEMHGVSTDDAIASIERIFKNDAEPKDIAAIIIEPVQGEGGFYVAPKDFMKRLRALCDQHGILLVADEVQTGAGRTGTFFAMEQMGVTPDLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYAGSPIACAAALAVMEVFEEESLLDRSKAVGERLVTGLKAIQAKHKSIGDVRALGSMIAVELFEDGDHHKPAAALVGQVVAKAREKGLILLSCGTYGNVLRVLVPVTAPDAQLDQGLAIIAECFDELA
>NZ_LR215729.1|WP_150549634.1|1947257_1950065_-|EAL-domain-containing-protein
MQTMTAEQLVNPVDIKQVLVLEDRNSALTANEALNQIRSQGKLVAGTPRLGYSDSAWWVAFELNAPPAMQLEMIIDQAFTDDIELWLYDRDRLIAPIYSGDHLPFLQRGVPFPRFMLTLPRLGVGPHTLLLRVHSASAVSLPMQLVSSEKNTLLVAVNWLLGGLLIGGLMSLAVFYMLKFRALREQQLGYFCITALALCAYSASLHGVIDLLFSQWPWLSKRLVQVANPLMLIFSTLFIISALRLKLGTVLRLALNVLIAIIVLVSLWNALYSDDYRGYQAFNLVLLLVGLFQALVVTLSLIKGLPYSRGYFLCWISALVMMTVLPLGRLGIINLPSDAYALQTFLPLLSMLLFSAVLDRQLENVRKALLSSQSQAIDNLEQYRALFNSAREGIFRCTLNGTLLEANPSLIRFLGSTPGDGSWQALPVQKLLGTTQWTKLVAKLDAAHPSVSQECQLRDLNGKRHWVYLSLHLRSAHTCIEGIIFDLSDRRQLEDRLKHQAAHDSLTGLLNRRELERLLQLSLLSNDTSRFSHLLYIDLDQFKQVNDLCGHSAGDQLLKQLSAHMQNMLPKSAQLARIGGDEFVVLLREQDHFVALGQAERLRRSVEQFVFIWENTPFRLHASIGVLTLSQDICDWETALRWADSASQQAKVLGRNRVQQFNPTDGALQEQQRQLQWITRLQEAMRSNHFVLFYQPVMPLQTVHDELHYELLLRYCDPATGEFISPERFMRAAERYSLLVDIDRWVVRNLCQWLSNNPEHLQQLGQVNLNLSTHSLLDASFHIFLSQELMSKGIPPHKVCIEVTEMVALGELAVSTKWLKSLRSQGFKVALDDFGSGFASYAYLRHLPLDILKIDGSFIRGIEHDRINQAMVGSMQQIAKQLGLQTVAEFVETQESLECLRALGIDYGQGYWIAEPAPLSSLTKPLPTASARFGL
>NZ_LR215729.1|WP_069902235.1|1950266_1950683_-|hypothetical-protein
MLRLCLFFVAGFLAVIFFHQPILGLLHGAGIVPVAPFNMAQTAPLGVPSILSAAFWGGVWGIVMLSVFRWQADQPQPWLKGLFFGGIALTLVALIVVFPLKGMGFNLSQLPGRFFIGFLVNSAWGVGTLIFARTLLGK
>NZ_LR215729.1|WP_150548066.1|1950811_1951789_+|arsenosugar-biosynthesis-radical-SAM-protein-ArsS
MRAMLPLLDDLAFPPITRGALEALQINLTYLCNQRCLHCHVNAGPTRTEAMTDDSLQLLHQVIDAHPVHTLDLTGGAPEMHPRFREIVTHARREGLRVIDRCNLTILSEPGYEDLAQFLAELQVEVTASLPCYSRDNVDKQRGDGVFDASIIGLQKLNALGYGQPGSGLILNLVYNPQGASLPPPQVALEADYKSHLAEDFGIVFNHLLTITNQPIARFGSTLVSKGQFNDYMQLLRDSYRAENLPNVMCRSLVSVDWQGYLYDCDFNQMLDLPLEIGGQVIARQRPHLRDLLNTSLSGNAIVTRDHCFACTAGQGSSCAGALNS
>NZ_LR215729.1|WP_069902237.1|1951800_1953198_+|sodium:solute-symporter
MQPNSAIGLFFWGFLLVYGVLMIVLSPRAVTVGGFFNGEDNQGRSAAPWLLTSSIFISWIFAKSVTNAANLGASYGLIGGLAYATYWLSIPLAGFVIYRLRRRFAATGLVSFLSSNYGRGAALAFSAAILIRLFNEVWSNTAVVGGYYGDSGSTEFIVAALLFTAVTLAYSLRGGLRSSILTDAAQAAIFVVALIWVLGLVLPAHTPRELASTSHWALDSGVDLLLVAGLQIFSYGFHDPVLTDRGFISEEKTMRRSFLIAGVLGFFAILAFSLIGVHAQLTGLPASDNVPAALAKTLGVGALMVMTVVMVSAAGSTLDSTFSSLAKLVGRELPQMAGRDLGQKAIGVGMAVMMVFAVLGNLPMIAGTDILKATTISGTMVIGLAPVFLLHGWVKPTRLGFHLSFWCGIVLGVGLSLGWVPQSWAIGDGKYALLLGVNLYGLILCTLGYVIAGWCAPSTQSRMLS
>NZ_LR215729.1|WP_150548067.1|1953194_1953710_+|redoxin-domain-containing-protein
MTTLIPRQPVPELNVSLMPEGQWQLNSPAPEHFTLLVFYRGLHCPLCRKSLQELNGLIERFNALGVSVLALSTDSHERAEKTQQTWTIGKVPLGYGVSIEEARNWGLFVSTGKGEKEPALFGEPGVFLVRPDGTLYMSAVNTMPFARPHFDEILGAIEYVINNDYPARGEA
>NZ_LR215729.1|WP_150548068.1|1953712_1954684_+|hypothetical-protein
MNLRAGRDCPLDYRLPPQVFSSSASLATDVLYVVGGLYGNRQALAALQQRLQAEPAARVVFNGDAHWFDRDPEIFMAIEQGLQAHLALRGNVETELGRDSASGAGCGCAYPASVDDAVVNRSNAIQAELNNTVQGISGMAARLAARPATALVTVGGRRVAISHGDEQSLAGWSCSREALASEARREQLDQWFETHNIEVLATSHTCSAVALNLQHGALINNGASGLPNFNNGRYGVISRIATHPHPAALYRAERDGLFIEALSLNYDHDAFLADFDRQWPHASPGALSYRARVLGATEDTPQSALLAGFSLCQTLCALEALES
>NZ_LR215729.1|WP_150548069.1|1954680_1956822_+|FAD-dependent-oxidoreductase
MNSRKLVLMGVILALIGSFFVFDLGQYLSLDAIKAQQAALNAQVSAEPLVAAGVFFAAYVAVTALSLPGAALMTLLGGALFGLLEGFVLVSFASVLGATLAMLSSRFLLRDWVQSRFGKRLASIDQGIEREGAFYLFALRLVPIFPFFLINLAMGLTRLPTRTFWWVSQLGMLPGTLVYVNAGRELGQLDSLSGILSPDVLGAFVLLGIFPLIARKLLSMIKARRVYSGWARPDTFERNLLVIGAGSGGLVSAYIGAAVKAKVSLIEKHKMGGDCLNTGCVPSKALLRSAKLANELNKGAALGFSDVSGRVDFAAVMERVQRVITDIEPHDSVERYNGLGVEVITGEAKITSPWTVEVNGKTISSRSLIIAAGARPLVPNIPGLDQVRAYTSDTIWSLREQPRWMLVLGGGPIGCELAQAFQRLGSQVIQVELDERLLPREDIDASELLMASMRADGVDLRLRHKAERFECVDGEQRMIARHQDTGEEVIIAFDCLLLALGRVANVTGYGAEDLDLVVRKNGTLETDEYMATRFPNVYAVGDVTGPYQFTHVAAHQAWYAAVNSLFGGFKRFKVDYRVIPYCTFTSPEIARVGLSENEARQQGIEFEVTRYGIDDLDRAIADDAAHGYVKVLTEPGKDRILGVCIAGEHAGELLAEYVLAMKHNLGMNKILGTTHTYPTMSEANKYAAGEWKRAHAPQGVLRWVERFHTWRRS
>NZ_LR215729.1|WP_090514376.1|1956821_1957535_+|DUF3047-domain-containing-protein
MQKLLLSLLLLAPLAQAQNMITPWAGSAGESSWTTPWRVADIPKLQPPQRSVVDIDGRNALQIRADSAAGGLLFPLDLPGDKAWQLSWQWRIDKTLKAARFATREGDDYAARVYVLLDYPLDTLPFLTRQKIRLARTFYDSNLPVATLSYVWDNREKPGTHARSAYTEQVEMRVLRGPETAVQQWQEEQRDLRADAIAAFGSAPSKILGVVFAADSDNTGESLVSYFAKPVLQNSAP

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Crispr_ID: NZ_LR215729_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR215729_2

3001601-3001818

Orphan

Consensus_repeat	Method
GGCGGAAGTGGTGGCGGAGGCCACGG	CRT

4 spacers

The CRISPR arrays of NZ_LR215729_2

>merge|NZ_LR215729|2|3001601-3001818|CRT
GGCGGAAGTGGTGGCGGAGGCCACGGAGGAAGTGGCAGTGGAGGAGGCGGAAGTGGTGGCGGAGGCCACGGTGGAGGCCACGGTGGAAGCGGCAGTGGAGGCGGCGGAAGCGGTGGTGGAGGCCACGGAGGAAGTGGCAGTGGAGGCGGCGGAAGTGGTGGCGGAGGCCACGGTGGAAGTGGCAGTGGAGGCGGCGGCAGTGGTGGCGGAGGTCATGG

>NZ_LR215729|2|1|3001601-3001818|CRT
GGCGGAAGTGGTGGCGGAGGCCACGG	AGGAAGTGGCAGTGGAGGA
GGCGGAAGTGGTGGCGGAGGCCACGG	TGGAGGCCACGGTGGAAGCGGCAGTGGAGGC
GGCGGAAGCGGTGGTGGAGGCCACGG	AGGAAGTGGCAGTGGAGGC
GGCGGAAGTGGTGGCGGAGGCCACGG	TGGAAGTGGCAGTGGAGGC
GGCGGCAGTGGTGGCGGAGGTCATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR215729.1\|WP_150548587.1\|2994797_2995793_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238744
NZ_LR215729.1\|WP_172970667.1\|3001945_3002101_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR215729.1\|WP_069900416.1\|3006092_3007613_-\|tripartite-tricarboxylate-transporter-permease	unknown	unknown	gnl\|CDD\|225870
NZ_LR215729.1\|WP_172970707.1\|3009240_3010605_-\|glucarate-dehydratase	unknown	unknown	gnl\|CDD\|211799
NZ_LR215729.1\|WP_150548593.1\|3004814_3005972_-\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	unknown	unknown	gnl\|CDD\|239432
NZ_LR215729.1\|WP_150548584.1\|2990910_2991933_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_LR215729.1\|WP_090512856.1\|3002489_3003245_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_LR215729.1\|WP_150548585.1\|2991955_2993275_-\|BatD-family-protein	unknown	unknown	gnl\|CDD\|379280
NZ_LR215729.1\|WP_150548590.1\|2998294_3000172_-\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236043
NZ_LR215729.1\|WP_150548583.1\|2989994_2990897_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_LR215729.1\|WP_090512862.1\|3000253_3001087_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187643
NZ_LR215729.1\|WP_150548586.1\|2993271_2994798_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238744
NZ_LR215729.1\|WP_150548588.1\|2995779_2996277_-\|DUF4381-family-protein	unknown	unknown	gnl\|CDD\|379552
NZ_LR215729.1\|WP_090512869.1\|2996273_2997224_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_LR215729.1\|WP_150548596.1\|3012365_3013604_-\|outer-membrane-porin,-OprD-family	unknown	unknown	gnl\|CDD\|335381
NZ_LR215729.1\|WP_150548594.1\|3007622_3008096_-\|tripartite-tricarboxylate-transporter-TctB-family-protein	unknown	unknown	gnl\|CDD\|377815
NZ_LR215729.1\|WP_069900414.1\|3008170_3009142_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
NZ_LR215729.1\|WP_150548592.1\|3003316_3004750_-\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|223354
NZ_LR215729.1\|WP_150548589.1\|2997252_2998230_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_LR215729.1\|WP_090512840.1\|3011175_3012087_+\|5-dehydro-4-deoxyglucarate-dehydratase	unknown	unknown	gnl\|CDD\|235141

Protein	Function_ID	Function_description	E-value
NZ_LR215729.1\|WP_150548587.1\|2994797_2995793_-\|VWA-domain-containing-protein	gnl\|CDD\|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	3.47101e-68
NZ_LR215729.1\|WP_090512856.1\|3002489_3003245_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.14178e-55
NZ_LR215729.1\|WP_069900416.1\|3006092_3007613_-\|tripartite-tricarboxylate-transporter-permease	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	1.01242e-159
NZ_LR215729.1\|WP_172970707.1\|3009240_3010605_-\|glucarate-dehydratase	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
NZ_LR215729.1\|WP_150548593.1\|3004814_3005972_-\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	gnl\|CDD\|239432	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).	3.65206e-114
NZ_LR215729.1\|WP_150548584.1\|2990910_2991933_+\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	1.09495e-141
NZ_LR215729.1\|WP_150548585.1\|2991955_2993275_-\|BatD-family-protein	gnl\|CDD\|379280	pfam13584, BatD, Oxygen tolerance. This family of proteins carries up to three membrane spanning regions and is involved in tolerance to oxygen in in Bacteroides spp.	8.11366e-24
NZ_LR215729.1\|WP_150548590.1\|2998294_3000172_-\|acyl-CoA-synthetase	gnl\|CDD\|236043	PRK07529, PRK07529, AMP-binding domain protein; Validated.	0
NZ_LR215729.1\|WP_150548583.1\|2989994_2990897_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	1.79182e-134
NZ_LR215729.1\|WP_090512862.1\|3000253_3001087_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187643	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR. These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.30589e-55
NZ_LR215729.1\|WP_150548586.1\|2993271_2994798_-\|VWA-domain-containing-protein	gnl\|CDD\|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	3.75274e-16
NZ_LR215729.1\|WP_150548588.1\|2995779_2996277_-\|DUF4381-family-protein	gnl\|CDD\|379552	pfam14316, DUF4381, Domain of unknown function (DUF4381). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 158 and 180 amino acids in length.	5.60622e-26
NZ_LR215729.1\|WP_090512869.1\|2996273_2997224_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.19284e-29
NZ_LR215729.1\|WP_150548596.1\|3012365_3013604_-\|outer-membrane-porin,-OprD-family	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	0
NZ_LR215729.1\|WP_150548594.1\|3007622_3008096_-\|tripartite-tricarboxylate-transporter-TctB-family-protein	gnl\|CDD\|377815	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family. This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.	1.71727e-05
NZ_LR215729.1\|WP_069900414.1\|3008170_3009142_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	5.65932e-75
NZ_LR215729.1\|WP_150548592.1\|3003316_3004750_-\|FAD-binding-protein	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.84121e-135
NZ_LR215729.1\|WP_150548589.1\|2997252_2998230_-\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.56327e-85
NZ_LR215729.1\|WP_090512840.1\|3011175_3012087_+\|5-dehydro-4-deoxyglucarate-dehydratase	gnl\|CDD\|235141	PRK03620, PRK03620, 5-dehydro-4-deoxyglucarate dehydratase; Provisional.	0

>NZ_LR215729.1|WP_090512862.1|3000253_3001087_-|SDR-family-NAD(P)-dependent-oxidoreductase
MRNWTFGTPKVAYISGGGSGIGLNIANVLLEEGCSVALFDLKFDDEVLRQLRKQCRASQKVEVYVVDITDPQAVDAAMDEAAQTLGAADLALNSAGILRTGVFTEMPYETFEQVVRINLLGSRNFAASALRHMHSGSHLVLVASLAGIVGTYTQAAYVASKHGVVGLAEVLRLEQKLKGIDVSVICPGEISTPLLTYEREHGSNVTKRLNEIAGVLTVDEAVSGIMKGLRSREFMITPGFRAKILRAVARKASGLFRRTIDINLAKAIAEDQALSLK
>NZ_LR215729.1|WP_150548590.1|2998294_3000172_-|acyl-CoA-synthetase
MGVFPLPDLHISTIADIHALEQTAVTDLALPNSTYELLQNAAATYGDKVALRFLPKATLDEQSINLSFRQLFAGVTQTANALHQLGVDKHSVVSMLLPNLPQTHLAIWGAEAAGIFNPINPLLEVEHIAAIINEAQSKVLITLAPMQGSDLWQKAQAIKQLAPCLSHILTVNLTPSADGSQHLSDSVLDFDATIKAQPADRLISGRQFAPDDIASYFHTGGTTGTPKLAPHTHRNELVCCYQMASVVNLDAQSKCLCGLPLFHVNGVFVTGLAPWLVGSEVILATPAGYRTPALMDNFWALVERYRVSFFSCVPTILSGLLDKPSEGHDLSSLDVALCGAAPLATELMRKFERKTGIVLLEAYGQTEGTCGSTVNPKHGERRVGSVGLPLPYLKIRIVEVDAQGKWLRDCAVNEPGCVAISGPNVFSGYKQAQQNEGQWIAEGWFNTGDLGRLDEDGYLWLTGRSKDLIIRGGHNIDPQMIEEAFYQHPEVAEAVAIGKPDKRVGEVPVIFLQLQKGAGVSLDELMRHAQASIHEKAAVPKEIHLVEAMPLTAVGKIFKPQLRNQLIEKMVTDELNALLQTPFKVAVRVDKKLGQCVIVSTTAESAATVKQALADYTFCLEVNQG
>NZ_LR215729.1|WP_150548589.1|2997252_2998230_-|AAA-family-ATPase
MSIRNEFLDLQRRIGESVLGQDDVVRQVLLGLLANGHVLLESLPGLAKTRTVKALAEHLDTRMSRIQFTPDLLPSDITGGEVLHSKDGQNQIRFEPGPLFGNIILADEINRAPAKVQAALLEAMEERQITVAGESHAMPELFMVLATQNPIEQEGTYALPEAQMDRFLMKVQLDYPSAENESEVLRLLRAEEKQGLKGDRPAVQRLDPALVFKARLEISEIHVAESIDRYLIDLVNASRSAADYDADLARWIAIGASPRGAISLDRVARAHAWLEGQDFVSPDDVRAIMLPVLRHRLQLSYDAVADGVSADQVVQRMLDVVAVPA
>NZ_LR215729.1|WP_090512869.1|2996273_2997224_-|DUF58-domain-containing-protein
MTAPADKTDGFVYVSLSQLMALQTPARGLSFAARQPRASILAGNHASRMRGRGLNFDELRRYQPGDDLRHLDWRASLRTGKPFVRSFSEERDRPMLVVVDQRINMFFGSSRSFKSATAAELAALAAWIAFHSGDRVGGLVFDDQQIESFAPLRSRARVQALCASICQHNQALNAGIAEVEHDTQLDTVLQRCLNLASHDHTLCIVSDFAGATPRTLQLLRQLSSHNDVIAMQVYDPTALALPESGRIRVTQGELQVELAIDKKHIRQPLGEFLTGRLRDVAKLLRRSQVPLLMISTAEDALSQLRRELGRLHEVHR
>NZ_LR215729.1|WP_150548588.1|2995779_2996277_-|DUF4381-family-protein
MSSDSPLISQLIELPLPEPISYLPQTWGWLALLALIGAVALIYAWRRVQRWRRNRYRREALQQWQQLNQQAQSSDPTQAVAALRELPELLKRTALSMPTNPPVAELSGARWQAFLAKTSAQPLPENFATQLALLSYAPAARLEQLDAQQLLATSRHWLETHNVAV
>NZ_LR215729.1|WP_150548587.1|2994797_2995793_-|VWA-domain-containing-protein
MWQFEYLWLLVLLPLPWLIYRLLPAYREARSAVRVPFFKAMLQAIGATPDAQNNRHDRWQLLLNLLIWALLLLAAARPVEVEKPIVRQQPVRDMMLAIDISQSMETRDYRDENGQLIDRLSAVKAVVKGFIDKRQNDRIGLIVFGSGAFAQAPMTLDHSSLDILLDETAIGMAGPNTAIGDAIGLSIKLLDAAKEREKVLILLTDGNDTSSAIEPQHAAIMAKNHDIVIHTIAIGDPKASGEDKVDLTALKRIARTSNGRFFRADDSSALEQVYATLDAMTPHDVKTLSHQPKRDWFWLPLGAALLLLCLYHLLAIAAARLPRMHPHSKES
>NZ_LR215729.1|WP_150548586.1|2993271_2994798_-|VWA-domain-containing-protein
MDIDLSALHFIRPLWLLLLVPGLLLPIIWRNGQSMQRRLNGKIAPHLLDYLLLTPQDNHRLRPVHLCAAILIIGAIAAAGPTWQEDRPDFVDNHAPLILALDLSPSMDSRDVPPSRLEAAKHKLHDLVERRGNAHTALIAYAGSAHIVLPATDDPALLNSFIEPLSSSLLEMPGKNLLQVVEQAKRILAAEKAPGSLVIISDGADTSQLDALQQQLKGSLLQVLILAVGSEASNFDRPGLEQLAHALDAPLGSLTLNDDDLDWIELHAQKHFKAASGDANETRWKDAGYWLVWPLLLIALLCIRRGWSISWSAAIVLGIGLAQPAPAQAGGFADAFLTPDQQGRWAFEHGHLPAAAAHFKDPYWKGIAAYQASDYKLAVSTFSTLDTARGQFYLGNSQVRLFQFAPAIEAYKRALALQPDFAEAKANLKLTLALQEKSFEDAENLPGDKADELKFDNTSDRGKETELKAGKAISDELWLQNLSTSPAKFLKQKFSMQNAARTAAGTAQ
>NZ_LR215729.1|WP_150548585.1|2991955_2993275_-|BatD-family-protein
MKSWLLLLSLLALTFSAHASEPELQVTARLVPDKNIVVGSTVRLQIDVLVETWLTAAPDLPELKLSGASVIPSNGRAQNISRKQAGKTLFGASYSYLITPHQAGNFSIPALTIEASVGQASAPLSASTQPITFSAAQPPGFAADEVPLVASALDWQQSIHYSAQPLKVGDSITRELHLKAQDSLALNLPTVEAPAVEGLRLYKREPEVTDLEDGRGHKTGGQRVDRQVYVVEREGDFSLPPLKLKWWDSSANTLRETSIDAVEFKAAARAPLKTPFSVEQDLEQLGQSTRIHLSQYWLSLLLGAVLLTVVAYYARPLIWRGRRVYQAQRARIKQQWRASALFAWRQVGPQLKQPQPQLGAFYLWLQRRTQRKSLRQFMQLLPPSLAKRLSRFIEQRYAQQTANPQAVEDLLDALPNLRRAANKRTDRTHKPALRPLNPQ
>NZ_LR215729.1|WP_150548584.1|2990910_2991933_+|ferrochelatase
MTDHALLLVNLGSPASTDVADVRSYLNQFLMDPYVIDLPWPVRRLLVSLILIKRPEQSAHAYASIWWEQGSPLVVLSQRLAEAMRSEWQHGPVELAMRYGQPSIESSLKRLAAKGVTQVTLAPLYPQFADSTTTTVIEEVKRVMRDNAMNMRLSIVAPFYDQPEYIDALVASAAPHLQQEYDHLLLSFHGLPERHLRKLDPTGHCLKGADCCQTASDEVVARCYRAQCIRSAEAFARKTGLADGTWSVSFQSRLGRAKWIEPYTEPHLQALAAQGVKKVLVMCPAFVADCIETLEEIGDRANEVFIEAGGESLQLVPCLNDHPEWVKALGALCARAPQQL
>NZ_LR215729.1|WP_150548583.1|2989994_2990897_+|TIGR01777-family-protein
MHILLTGGTGLIGRGLCHLWAGQGHQLTVLSRTPERVAELCGAKVRGIAALAEVSDEPLDAVINLAGEPIADKPWSSERKTLLWSSRIGLTEELVAWLGQRAQKPAVLVSGSAVGWYGDGGERELAEDVPQVTNDFAAQLCNAWEEAAMRAEAQGIRVVLVRTGLVLANKQGFLKRLIPLYKMCMGGNVGSGRQWMPWVHLADEIGAIDFLMHHQSASGPYNVCSPHPVRNREFTYELAHALSRFAVLPVPSIVLRMALGEMSGLLLAGQRCVPQRLLDAGYKFRFTRLDVALADLLSTH
>NZ_LR215729.1|WP_172970667.1|3001945_3002101_+|hypothetical-protein
MHVGDDRGMHVGDDRGMHVGDDRGMHAAGEVGDDRGLHAAGEPGDDRGGNR
>NZ_LR215729.1|WP_090512856.1|3002489_3003245_+|FadR-family-transcriptional-regulator
MDTQTPPPRTRRKHRSLAQELVAELSEQIREGLIKRGDKLPTESAIMEAQGVSRTVVREALSRLQAAGLVETRHGIGTFVLDTPSPSGFRIDPATIVTLREVLAVLEFRISLEVESAGLAAQRRSDEQLKGMREALDALEDATSQTGDAVASDFKFHLLISEATGNRYFTDIMMHLGTSIIPRTRVNSASIAHDDQAHYMARLGREHEQIYESIARQDPEAARAAMRLHLTNSRERLRQAHEAAEAEALNA
>NZ_LR215729.1|WP_150548592.1|3003316_3004750_-|FAD-binding-protein
MSLVTSPEFIRRIESIVGSAGLVQDPERMHSYLVDWRNAYTGNAALIVRPANTEQVAAVVRLCHEANVALVPQGGNTGLCGGSIPDATGQQVVLSLTRMTRIREIDPANATITVEAGVILQQLQQAASEAGRLFPLSLGAEGSCTVGGNLATNAGGTAVLRYGNMRELTLGIEVVLPDGRIWNGLRGLRKDNTGYDLKHLFIGSEGTLGIITAAVLKLFPATHSMATAWVALPSPEAAIELISHIRGVCADRLTGFEMMSRQSLEFVLSHVAGCRDPLTSEQPWYALIELRDTISDAPLTELLETCLSHAFEQGLVIDAVIASNDSQAAALWGLREGISEAQNHEGPSLKHDISVPVSQIPAFIERTDKALQARFPGVRIVSYGHIGDGNLHYNISKPVGADDVAFKANELAIMDIIYQKTGEFNGSISAEHGLGQSKPAAAVRFKDPLEIELMRAIKRTLDPTGLMNPGKVFAAEQ
>NZ_LR215729.1|WP_150548593.1|3004814_3005972_-|mandelate-racemase/muconate-lactonizing-enzyme-family-protein
MQDLKNNTSGDDDQIAWVRVASVFVPLANPISDAKVLTGRQKPMTEIAILVVEIETKDGHRGLGFSYSKRAGGPGQFAHAKELAPVLIGENPSDIAKLWDKLCWAGASVGRSGLATQAIGAFDVALWDLKAKRANLSLARLLGAHRDSVQCYNTSGGFLHTPLEQLMINTDISREKGIGGIKLKVGQPDQALDLHRVSSIRKHLGDAFPLMVDANQQWDRPTAQRMCRQLEQYNLIWIEEPLDCYDAQGHAMLAQQFDTPIATGEMLTSVAEHWEFIKQGGADYLMPDAPRIGGITPYLKVQALAEHNGLMIAPHFAMELHIHLAATYSREPWVEHFEWLEPLFNERMETRDGRMLVPTRPGLGLSLSEQSARWTAQEFTAGNRP
>NZ_LR215729.1|WP_069900416.1|3006092_3007613_-|tripartite-tricarboxylate-transporter-permease
MIELLQQGFGAVFSPYIFVLITLGVAVGIVFGAVPGLSATMAIALCLPLTYTMGPAAGLSLLVALFIGATSGGLISAILLNIPGTPSSIATTFDGAPMMRQGLGVKALGLGVVFSFLGTIFSIGALMFIAPMLADIALSFGPHEYFAIAVFSLTLIATLSTGSLVKGLFAGALGFAFSTVGIAPVEAVRRFTFDHPSLNGGFAMLTVMIGMFAVAEVLKFAEKGRSADRAKPQNISMKGIKGFGFSIKEFIFQIPNATRSALIGVGIGILPGIGAGTSNIVSYIAAKKRSKTPEMFGKGAPEGVVASETANNAGIGGAMIPLLTLGIPGDTTTAILLGGFMIHGIQPGPLLFLTQGDLVYTIFAALLLASVLMLFLEFFGLRIFIKLLSIPKHILLPIILVLCVVGAFGLNSRVFDVWAMMLFGLLGYGFVKGGLPIAPFIIGFILGPMAETNLRRGLMLSDGNFMGFLSNPISAAFLALAALSVSWHLVTALRGKKDGVAQLMSS
>NZ_LR215729.1|WP_150548594.1|3007622_3008096_-|tripartite-tricarboxylate-transporter-TctB-family-protein
MDTCKRNELLIGLAMLGAGLGYLFMTLQLPRRGFVDSAFVPYILSAVLCLLGVLQLLAWKKLPKPTAGAAVEKESIDYLTVIKSFALVIIYVALLETVGFPIMTALYLYVQFLVLTPLDQKANHLLYAGIALVSSASIYFLFRESFDLLLPAGLLNF
>NZ_LR215729.1|WP_069900414.1|3008170_3009142_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKTLCASLIASFLSLTAGAAVAADAANWPTRPVQVVVIANAGGDTDFNARMMAKYFTKVTGKSMVVTNVAGGGGTLAAEQVKGAAADGNTILFTHTGQLIVNEVAGLSEDSYDAFDISCIAGVDKGAVFVSGKSSGIDTLDQLITKAKAEPNTITYGTEMGSFSHLQGLMFEKLSGTDLKLVDSGTVSEKIVALLGKRIDLGAISYGSVQDYVTSGKMSALGQPNEERNALLGDIKTFKEQGVDLVIDKPYVVAFPKGTDPAIVAKMADVMKQITEQPEYAEELKKSFKQPVSYYGTEEAKAILSKSRDTYMQFKDELRQTK
>NZ_LR215729.1|WP_172970707.1|3009240_3010605_-|glucarate-dehydratase
MQVIPVAGHDSMLLNLCGAHAPYFTRNLVLLTDNDGRTGIGEVPGGEGIRQALERCRSLVIGQPVARYNFILNSLRRSIAGRDGSGPQTTQHQVTSESEAAVLKQPHEINLRLDNVITAVEAALLDLLGQHLGVPVAELLGSGQQRDSVPMLAYLFYIGDRNRTDLPYLSGDDSQHSWYHLRHQEALTPQAIADLASAAHARYGFKDFKLKGGVMRGAQEMQAVAAIKARFPDSRVTLDPNGAWSLAEAIEVCQGQNHILAYAEDPCGPENGFSGREIMAEFKRATGIPTATNMVATDWRQMGHSLRLEAVDIPLADPHFWTLQGSVRLAQMCEEFGLTWGSHSNNHFDVSLAMFTHAAAAAPGRISAIDTHWIWQEGQERLTREPLQIVGGEVRVPQKPGLGIEPDIDRIMQAHELYQQVASGARDDAMAMRYLVPGWQYDPKKPSLGREPAL
>NZ_LR215729.1|WP_090512840.1|3011175_3012087_+|5-dehydro-4-deoxyglucarate-dehydratase
MNPQELKSILSSGLLSFPVTDFDAAGNFRADTYARRLEWLSPYGASALFAAGGTGEFFSLAPDEYSAVIKTAVDTCDGGVPILAGVGGPTRLAIQYAQEAERLGAKGLLLLPHYLTEASQEGVAAHVEAVCKSVKIGVVVYNRNVCRLTAPLLEQLAERCPNLIGYKDGLGDIELMVSIRRRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGKIIDDFFLPYLDIRNRRAGYAVSIVKAGAKIAGFDAGPVRAPLTDLLPEEYEQLAALIDAQGAQ
>NZ_LR215729.1|WP_150548596.1|3012365_3013604_-|outer-membrane-porin,-OprD-family
MTARNALSLAVLNAIGAAALPLSSQAAGFADDAKVNFGLRNFYINRNFTNPAYPQGKAEEWTQSFILDARSGFTEGTVGFGVDVLGLTAIKLDGGRGTARTGLLPVHDDGRPADDYGRLGIAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFQGGQLTSSEIAGLTLYGGQFRGNSPRDDASMDDMSFGKGVSDRFNFGGGEFRFNEDRTMIGVWGAELKDVYNQQFFNLVHTQPVGDWTLGANLGYFIGGEDGSELAGKMDNKTSSGLFSAKSGSHTFYLGLQRVSGDKWMRVNGTSGGTLANDSYNSSYDNAEERSWQVRYDFNFAGLGIPGMTLMNRYISGDNIKSGAVDDGKEWGRETELAYVVQSGAFKNLSMKWRNSTIRRDFSTSEFDENRLIFNYPLPIL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR215729_2	2.2\|3001672\|31\|NZ_LR215729\|CRT	3001672-3001702	31	NZ_CP026518	Deinococcus sp. NW-56 plasmid unnamed2, complete sequence	200939-200969	7	0.774

1. spacer 2.2|3001672|31|NZ_LR215729|CRT matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

tggaggccacggtggaagcggcagtggaggc	CRISPR spacer
gcgacgtgacgctggaagcggcattggaggc	Protospacer
  ** *. *** *********** *******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

41929 : 47904

Acinetobacter_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150547244.1\|41929_43771_-	TonB-dependent vitamin B12 receptor	A0A0P0I887	Acinetobacter_phage	4.3e-07	26.8
WP_150547245.1\|44154_44475_-	hypothetical protein	NA	NA	NA	NA
WP_150547246.1\|44493_45144_-	class I SAM-dependent methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.1e-16	30.0
WP_069899160.1\|45162_45681_-	C40 family peptidase	A0A2H5BM69	Streptomyces_phage	6.2e-20	42.4
WP_069899162.1\|45721_46312_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	2.8e-24	47.6
WP_069899163.1\|46463_47069_-	C40 family peptidase	D2KRB9	Lactobacillus_phage	8.6e-05	28.6
WP_150547247.1\|47145_47904_-	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	8.8e-15	31.2

DBSCAN-SWA_2

1037102 : 1095582

Bacillus_virus(33.33%)

protease,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150547714.1\|1037102_1038416_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.5e-158	76.0
WP_172970637.1\|1038680_1039199_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_150547716.1\|1039195_1040179_+	FecR domain-containing protein	NA	NA	NA	NA
WP_150547717.1\|1040276_1042670_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_150547718.1\|1042723_1043854_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_170827712.1\|1043850_1044015_+	hypothetical protein	NA	NA	NA	NA
WP_069898170.1\|1044091_1045858_-	cation acetate symporter	NA	NA	NA	NA
WP_069898171.1\|1045868_1046135_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_150547719.1\|1046379_1047009_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_150547720.1\|1047151_1049182_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	5.6e-16	64.9
WP_090509396.1\|1049306_1050023_-	hypothetical protein	NA	NA	NA	NA
WP_069898175.1\|1050225_1050741_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_150547721.1\|1050809_1052066_-	DUF3391 domain-containing protein	NA	NA	NA	NA
WP_150547722.1\|1052229_1053126_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_069898178.1\|1053194_1054394_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	3.4e-13	29.3
WP_150547723.1\|1054657_1055515_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_150547724.1\|1055612_1056242_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_150547725.1\|1056234_1059252_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
WP_150547726.1\|1059248_1059575_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA
WP_150547727.1\|1059588_1060839_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_150547728.1\|1060903_1062157_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.2e-102	53.2
WP_150547729.1\|1062610_1063654_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_090509370.1\|1063736_1064519_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_150547730.1\|1064566_1065058_-	hypothetical protein	NA	NA	NA	NA
WP_150547731.1\|1065474_1066104_+	hypothetical protein	NA	NA	NA	NA
WP_150547732.1\|1066643_1068173_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_069898189.1\|1068311_1069415_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_150547733.1\|1069785_1071078_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_150547734.1\|1071272_1071746_-	thioesterase family protein	NA	NA	NA	NA
WP_069898192.1\|1071809_1072787_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_090509342.1\|1072830_1073718_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_150547735.1\|1073791_1074727_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_150547736.1\|1074993_1075950_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_090509334.1\|1076166_1077147_+	membrane dipeptidase	NA	NA	NA	NA
WP_069898197.1\|1077244_1077775_+	hydrocarbon binding protein	NA	NA	NA	NA
WP_150547737.1\|1077884_1079945_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_150547738.1\|1080207_1082160_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_150547739.1\|1082156_1083380_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_150549614.1\|1083369_1084167_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_069898201.1\|1084191_1084443_+	hypothetical protein	NA	NA	NA	NA
WP_069898202.1\|1084516_1085620_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_069898552.1\|1086117_1087497_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_150547740.1\|1088432_1089629_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-30	39.4
WP_069898204.1\|1089630_1090515_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_150547741.1\|1090547_1091492_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_150547742.1\|1091649_1092507_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069898207.1\|1092650_1093400_-	hypothetical protein	NA	NA	NA	NA
WP_150547743.1\|1094385_1095582_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.8e-29	37.7

DBSCAN-SWA_3

1865384 : 1932506

Acidithiobacillus_phage(25.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_121256897.1\|1865384_1866884_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_003459721.1\|1866876_1867680_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	4.0e-34	36.2
WP_172970649.1\|1867901_1871072_+	hypothetical protein	NA	NA	NA	NA
WP_150547251.1\|1871188_1872520_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_150548046.1\|1872567_1874922_-	MMPL family transporter	NA	NA	NA	NA
WP_150549632.1\|1874940_1876020_-	hypothetical protein	NA	NA	NA	NA
WP_150548047.1\|1876233_1877604_-	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_150548048.1\|1877672_1879640_-	DUF1302 family protein	NA	NA	NA	NA
WP_021702885.1\|1881945_1882686_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.0e-60	49.2
WP_150548049.1\|1882682_1883474_-	hypothetical protein	K4I413	Acidithiobacillus_phage	3.9e-42	39.2
WP_150548050.1\|1885112_1891226_-	DUF637 domain-containing protein	A0A0R6PJK4	Moraxella_phage	1.0e-28	35.2
WP_150548051.1\|1891255_1892950_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_023124876.1\|1893353_1893812_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_150548052.1\|1894020_1894818_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_172970650.1\|1894826_1897307_-	penicillin acylase family protein	NA	NA	NA	NA
WP_172970616.1\|1897432_1898998_-	hypothetical protein	NA	NA	NA	NA
WP_003089120.1\|1899757_1900156_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003089115.1\|1900230_1900581_+	mercury transporter MerT	NA	NA	NA	NA
WP_003150552.1\|1900593_1900869_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_150548055.1\|1901101_1904095_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.7e-258	47.5
WP_150548056.1\|1904098_1904515_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_003089107.1\|1904514_1904754_-	hypothetical protein	NA	NA	NA	NA
WP_003150544.1\|1904955_1905885_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.9e-40	46.9
WP_031639052.1\|1906170_1906527_-	cupin domain-containing protein	NA	NA	NA	NA
WP_134310428.1\|1906856_1909178_+	DUF1989 domain-containing protein	NA	NA	NA	NA
WP_150548058.1\|1909661_1911083_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_150548059.1\|1912670_1914218_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_042920011.1\|1914567_1914969_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_172970651.1\|1917755_1918244_-	hypothetical protein	NA	NA	NA	NA
WP_042920411.1\|1919300_1920020_+\|holin	phosphatidylcholine synthase	NA	NA	NA	NA
WP_042920409.1\|1920016_1920316_+	GIY-YIG nuclease family protein	A0A2I7QNM5	Vibrio_phage	2.9e-06	40.8
WP_004424199.1\|1920362_1921298_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_150548061.1\|1921402_1922212_-	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_004424195.1\|1922227_1923622_-	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_150548062.1\|1923707_1924967_-	ethanolamine utilization protein EutH	NA	NA	NA	NA
WP_150548063.1\|1925129_1926650_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_042920399.1\|1926968_1928048_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_042920397.1\|1928050_1928371_-	glutaredoxin family protein	NA	NA	NA	NA
WP_004424187.1\|1928690_1929698_-	nucleoid-associated protein YejK	A0A2K8HR80	Pseudomonas_phage	1.6e-149	77.4
WP_150549633.1\|1931006_1932506_+\|transposase	IS21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

3308541 : 3322485

Pseudomonas_phage(62.5%)

integrase

attL 3307647:3307662|attR 3319271:3319286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3307647:3307662	attL	NA	NA	NA	NA
WP_150548744.1\|3308541_3309411_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	3.0e-51	36.3
WP_150548745.1\|3309801_3310776_+\|integrase	tyrosine-type recombinase/integrase	W6MYA3	Pseudomonas_phage	5.4e-126	69.8
WP_150548746.1\|3311039_3311450_-	DUF2591 family protein	A0A125RNP6	Pseudomonas_phage	4.6e-10	36.4
WP_150548747.1\|3311446_3311896_-	hypothetical protein	Q6JII8	Burkholderia_virus	8.0e-24	57.4
WP_150548748.1\|3311931_3312870_-	hypothetical protein	A0A088F840	Sulfitobacter_phage	5.0e-20	29.2
WP_150548749.1\|3312941_3313106_-	DUF1382 family protein	NA	NA	NA	NA
WP_150548750.1\|3313115_3313373_-	DUF3850 domain-containing protein	A0A2I7RB38	Vibrio_phage	6.6e-15	51.2
WP_150548751.1\|3313372_3313747_-	Lar family restriction alleviation protein	NA	NA	NA	NA
WP_150548752.1\|3313743_3314100_-	hypothetical protein	A0A0H5AW68	Pseudomonas_phage	5.4e-23	59.5
WP_172970674.1\|3314096_3314690_-	hypothetical protein	NA	NA	NA	NA
WP_150548753.1\|3314686_3314899_-	hypothetical protein	NA	NA	NA	NA
WP_150548754.1\|3314895_3315204_-	DUF4406 domain-containing protein	A0A2K8I958	Pseudomonas_phage	3.8e-25	57.8
WP_150548755.1\|3315290_3315563_-	hypothetical protein	NA	NA	NA	NA
WP_150548756.1\|3315606_3315828_-	hypothetical protein	NA	NA	NA	NA
WP_172970709.1\|3315808_3316471_-	HNH endonuclease	A0A1S5SDS7	Streptococcus_phage	1.5e-15	35.6
WP_150548757.1\|3316526_3317375_-	N-6 DNA methylase	H7BVT3	unidentified_phage	3.7e-14	37.0
WP_150549670.1\|3317438_3317762_-	hypothetical protein	A0A1Y0SUG1	Pseudomonas_phage	1.4e-14	45.1
WP_150548758.1\|3318622_3319075_-	hypothetical protein	NA	NA	NA	NA
WP_150548759.1\|3319120_3319600_-	single-stranded DNA-binding protein	A0A0U1VYM4	Pseudomonas_phage	3.0e-05	29.6
3319271:3319286	attR	NA	NA	NA	NA
WP_150548760.1\|3319613_3320231_-	YqaJ viral recombinase family protein	A0A1B0VMB3	Pseudomonas_phage	1.1e-87	77.2
WP_150548761.1\|3320214_3320991_-	ERF family protein	Q9MC70	Pseudomonas_phage	3.3e-57	50.8
WP_150548762.1\|3320999_3322067_-	hypothetical protein	A0A1B0VN89	Pseudomonas_phage	2.5e-47	63.2
WP_150548763.1\|3322188_3322485_-	hypothetical protein	A0A0S2SYA7	Pseudomonas_phage	1.3e-35	74.7

DBSCAN-SWA_5

3328009 : 3373813

Pseudomonas_phage(39.39%)

coat,terminase,capsid,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150548772.1\|3328009_3328303_-	outer membrane protein assembly factor BamE	J7HXI2	Pseudomonas_phage	4.0e-16	44.1
WP_150549671.1\|3328327_3329044_-	helix-turn-helix transcriptional regulator	W6MVG5	Pseudomonas_phage	1.2e-53	61.0
WP_150548773.1\|3329167_3329392_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_172970618.1\|3329330_3329591_-	hypothetical protein	NA	NA	NA	NA
WP_150548774.1\|3329652_3330243_+	hypothetical protein	NA	NA	NA	NA
WP_150548775.1\|3330307_3330562_+	hypothetical protein	NA	NA	NA	NA
WP_150549672.1\|3330573_3331461_+	helix-turn-helix domain-containing protein	A0A1B0VME0	Pseudomonas_phage	1.2e-52	64.4
WP_150548776.1\|3331447_3332245_+	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	3.4e-57	52.8
WP_150548777.1\|3332237_3332876_+	hypothetical protein	A0A0S2SYE7	Pseudomonas_phage	1.4e-21	32.1
WP_150548778.1\|3332872_3333100_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_150548779.1\|3333099_3333303_+	TraR/DksA C4-type zinc finger protein	E5G6L7	Salmonella_phage	1.7e-05	42.4
WP_150548780.1\|3333295_3333505_+	hypothetical protein	NA	NA	NA	NA
WP_150548781.1\|3333497_3333968_+	hypothetical protein	A0A2H4J106	uncultured_Caudovirales_phage	4.1e-55	65.4
WP_150548782.1\|3334343_3334940_+	recombination protein NinG	A0A2H4JGI2	uncultured_Caudovirales_phage	1.8e-76	72.2
WP_150548783.1\|3335168_3335396_+	hypothetical protein	NA	NA	NA	NA
WP_150548784.1\|3335385_3335604_+	hypothetical protein	NA	NA	NA	NA
WP_150548785.1\|3335600_3335807_+	hypothetical protein	NA	NA	NA	NA
WP_150548786.1\|3335836_3336403_+	hypothetical protein	H2BDI9	Pseudomonas_virus	2.5e-30	38.5
WP_150548787.1\|3336680_3336893_+	hypothetical protein	NA	NA	NA	NA
WP_150548788.1\|3337067_3337442_+	hypothetical protein	W6MYB2	Pseudomonas_phage	6.4e-27	53.5
WP_150549673.1\|3337513_3337852_+	cell wall hydrolase	W6MVH4	Pseudomonas_phage	3.5e-48	74.8
WP_172970675.1\|3337848_3338025_+	hypothetical protein	NA	NA	NA	NA
WP_150548789.1\|3338021_3338363_+	hypothetical protein	NA	NA	NA	NA
WP_172970676.1\|3338497_3338668_+	hypothetical protein	NA	NA	NA	NA
WP_150548790.1\|3338664_3338967_+	hypothetical protein	NA	NA	NA	NA
WP_150548791.1\|3338997_3339201_-	hypothetical protein	NA	NA	NA	NA
WP_150548792.1\|3339299_3339938_+\|terminase	terminase small subunit	U5PZD3	Bacillus_phage	2.8e-22	35.6
WP_150548793.1\|3339912_3341193_+\|terminase	terminase	A0A2H4IY82	uncultured_Caudovirales_phage	5.7e-208	83.1
WP_150548794.1\|3341197_3342580_+	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	2.3e-154	59.6
WP_150549674.1\|3342639_3343668_+\|capsid	minor capsid protein	A0A0H5BBX3	Pseudomonas_phage	2.2e-85	47.4
WP_150548795.1\|3343677_3343959_+	hypothetical protein	NA	NA	NA	NA
WP_150548796.1\|3344106_3344880_+	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	4.0e-63	56.3
WP_150548797.1\|3344974_3346138_+\|coat	P22 coat - protein 5 family protein	W6EBZ8	Rhizobium_phage	6.3e-97	53.5
WP_150548798.1\|3346186_3346414_+	hypothetical protein	NA	NA	NA	NA
WP_150548799.1\|3346417_3346915_+	hypothetical protein	A0A2H4J970	uncultured_Caudovirales_phage	1.5e-31	50.0
WP_150548800.1\|3346914_3347292_+	hypothetical protein	A0A2H4J5T3	uncultured_Caudovirales_phage	2.0e-23	46.8
WP_150548801.1\|3347291_3347687_+	HK97 gp10 family phage protein	A0A2L0V103	Salmonella_phage	1.3e-09	37.7
WP_150548802.1\|3347690_3348110_+	hypothetical protein	A0A2L0V141	Salmonella_phage	1.8e-17	41.6
WP_150548803.1\|3348113_3349259_+	hypothetical protein	A0A2H5BHH8	Acinetobacter_phage	2.0e-39	35.9
WP_150548804.1\|3349260_3349560_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_150548805.1\|3349679_3349856_+	Arc family DNA-binding protein	A0A2H4J2A5	uncultured_Caudovirales_phage	9.7e-10	66.0
WP_172970677.1\|3349921_3350845_+	antA/AntB antirepressor family protein	A0A0H5BBY8	Pseudomonas_phage	2.2e-76	71.5
WP_172970678.1\|3350901_3351558_+	hypothetical protein	NA	NA	NA	NA
WP_150548806.1\|3351642_3352068_+	hypothetical protein	S4TR42	Salmonella_phage	6.9e-09	34.9
WP_150548807.1\|3352237_3352630_+	hypothetical protein	A0A1X9IAP8	Xanthomonas_phage	9.5e-13	35.7
WP_150548808.1\|3352925_3355361_+\|tail	phage tail tape measure protein	A0A059VJZ1	Pseudomonas_phage	8.8e-16	28.3
WP_150548809.1\|3355360_3356230_+	DUF2460 domain-containing protein	A0A0F7L7R5	uncultured_marine_virus	1.6e-07	42.2
WP_172970679.1\|3356328_3357180_+	phage BR0599 family protein	NA	NA	NA	NA
WP_150548811.1\|3357176_3357599_+	C40 family peptidase	NA	NA	NA	NA
WP_150548812.1\|3357598_3360790_+	hypothetical protein	M4QNR6	Tetraselmis_viridis_virus	8.2e-46	27.8
WP_150548813.1\|3360786_3361581_+	DUF2793 domain-containing protein	A0A2H4GY75	Pseudomonas_phage	2.6e-09	47.3
WP_150548814.1\|3361577_3362279_+	LamG domain-containing protein	M4QP69	Synechococcus_phage	7.8e-18	32.8
WP_150548815.1\|3362280_3362544_+	hypothetical protein	NA	NA	NA	NA
WP_150548816.1\|3363411_3364539_+	nucleoid-associated protein	NA	NA	NA	NA
WP_172970680.1\|3364550_3365762_+	hypothetical protein	NA	NA	NA	NA
WP_150548817.1\|3366076_3366640_-	recombinase family protein	A0A219Y912	Aeromonas_phage	1.1e-22	38.6
WP_150548818.1\|3366799_3367738_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_090510818.1\|3367895_3368882_+	agmatinase	NA	NA	NA	NA
WP_150548819.1\|3368884_3370393_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_170860569.1\|3370474_3370648_+	hypothetical protein	NA	NA	NA	NA
WP_150548820.1\|3370651_3372121_+	cytosine permease	NA	NA	NA	NA
WP_090510810.1\|3372124_3373813_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.0e-63	30.1

DBSCAN-SWA_6

3636794 : 3646485

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150548957.1\|3636794_3637967_+	aminotransferase class V-fold PLP-dependent enzyme	A0A2K9L470	Tupanvirus	1.2e-95	45.3
WP_150548958.1\|3638421_3640428_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_150548959.1\|3640548_3641352_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.2e-06	25.1
WP_150548960.1\|3641393_3642272_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.1e-36	36.9
WP_150548961.1\|3642274_3642817_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	8.4e-52	54.7
WP_150549691.1\|3642813_3643692_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	4.2e-109	66.3
WP_150548962.1\|3643760_3644819_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.6e-101	53.9
WP_150548963.1\|3645041_3646217_+	MFS transporter	NA	NA	NA	NA
WP_069900481.1\|3646248_3646485_-	YheU family protein	A0A2H4J8A7	uncultured_Caudovirales_phage	2.5e-24	76.0

DBSCAN-SWA_7

4151482 : 4158478

uncultured_Caudovirales_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_069900289.1\|4151482_4152148_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.4e-93	83.8
WP_069900288.1\|4152257_4152650_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.2e-49	76.0
WP_150549250.1\|4152651_4153005_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.5e-35	63.3
WP_069900286.1\|4153004_4153304_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	5.1e-27	59.6
WP_069900285.1\|4153300_4153636_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	5.2e-44	79.3
WP_150549251.1\|4153632_4154616_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.4e-145	77.7
WP_090511984.1\|4154706_4155708_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_150549252.1\|4155727_4157122_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_069900281.1\|4157197_4158478_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.9e-96	53.5

DBSCAN-SWA_8

4343041 : 4452036

uncultured_Caudovirales_phage(54.0%)

protease,tRNA,portal,head,terminase,capsid,plate,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172970689.1\|4343041_4344424_-\|tRNA	cysteine--tRNA ligase	A0A2L2DK39	Acanthamoeba_polyphaga_mimivirus	5.7e-44	35.0
WP_150549337.1\|4344525_4346190_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	1.3e-199	60.7
WP_069900155.1\|4346587_4347082_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.7e-14	35.4
WP_150549338.1\|4347078_4347804_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_069900153.1\|4347881_4349411_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_069900152.1\|4349490_4350687_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_150549339.1\|4350702_4352172_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_090512214.1\|4352168_4352642_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_069900149.1\|4352756_4353362_-\|tRNA	tRNA hydroxylase	NA	NA	NA	NA
WP_090512217.1\|4353615_4354479_+	universal stress protein	NA	NA	NA	NA
WP_069900373.1\|4354506_4354983_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_150549716.1\|4355578_4358188_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_150549340.1\|4358410_4359616_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_090512226.1\|4359634_4360213_+	ANTAR domain-containing response regulator	NA	NA	NA	NA
WP_150549341.1\|4360526_4361765_+	alanine transaminase	NA	NA	NA	NA
WP_069900143.1\|4361810_4362203_-	hypothetical protein	NA	NA	NA	NA
WP_069900142.1\|4362406_4362721_+	transcriptional regulator	NA	NA	NA	NA
WP_069900141.1\|4363016_4363460_+	thioesterase family protein	NA	NA	NA	NA
WP_090512231.1\|4364206_4365418_+	NarK/NasA family nitrate transporter	NA	NA	NA	NA
WP_150549342.1\|4365505_4367173_+	protein kinase	A0A1V0SD90	Indivirus	1.2e-11	34.4
WP_150549343.1\|4367444_4369901_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_150549344.1\|4369897_4370209_+	nitrite reductase small subunit NirD	NA	NA	NA	NA
WP_150549345.1\|4370241_4372950_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	7.7e-13	24.0
WP_150549346.1\|4372980_4373715_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_150549347.1\|4373787_4374753_-	OmpA family protein	NA	NA	NA	NA
WP_069900372.1\|4374863_4375454_-	RNA polymerase sigma factor SigX	NA	NA	NA	NA
WP_150549348.1\|4375544_4376369_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_069900131.1\|4376370_4376616_-	CrfX protein	NA	NA	NA	NA
WP_090512246.1\|4376671_4377667_-	zinc transporter ZntB	NA	NA	NA	NA
WP_069900129.1\|4377712_4378201_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_150549349.1\|4378333_4379284_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_150549350.1\|4379346_4381719_-	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	7.6e-182	37.6
WP_150549351.1\|4381896_4382715_+	pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA	NA	NA	NA
WP_090512255.1\|4382805_4383423_-	bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH	NA	NA	NA	NA
WP_069900124.1\|4383608_4384343_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_150549352.1\|4390855_4392388_+	TolC family protein	NA	NA	NA	NA
WP_090515859.1\|4392368_4393136_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_150549353.1\|4393128_4394469_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_150549354.1\|4394468_4396565_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_170860642.1\|4396715_4396865_-	hypothetical protein	NA	NA	NA	NA
WP_150549355.1\|4397194_4399522_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_150549356.1\|4399739_4400840_+	AraC family transcriptional regulator ligand-binding domain-containing protein	NA	NA	NA	NA
WP_150549357.1\|4401251_4403117_+	DUF1302 family protein	NA	NA	NA	NA
WP_150549358.1\|4403134_4404472_+	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_150549359.1\|4404547_4405684_+	hypothetical protein	NA	NA	NA	NA
WP_150549360.1\|4405683_4408056_+	MMPL family transporter	NA	NA	NA	NA
WP_069898586.1\|4408580_4410455_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_010490206.1\|4410670_4410943_-	DNA-binding protein HU-beta	A3E2K9	Sodalis_phage	7.2e-20	59.6
WP_069898587.1\|4411077_4413474_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	9.3e-220	52.0
WP_150549361.1\|4413624_4414905_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.3e-135	57.6
WP_069898589.1\|4415011_4415653_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.4e-59	59.1
WP_069898590.1\|4415743_4417054_-	trigger factor	NA	NA	NA	NA
WP_150549362.1\|4418433_4419486_-\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	6.2e-160	80.2
WP_150549363.1\|4419486_4421244_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	2.4e-281	80.5
WP_150549364.1\|4421394_4422246_+\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	6.5e-99	67.8
WP_150549365.1\|4422273_4423281_+\|capsid	phage major capsid protein, P2 family	A0A2H4JCR7	uncultured_Caudovirales_phage	6.4e-138	74.7
WP_150549366.1\|4423284_4424004_+\|terminase	terminase	A0A2H4J948	uncultured_Caudovirales_phage	3.9e-73	65.1
WP_150549367.1\|4424108_4424573_+\|head	head completion/stabilization protein	A0A2H4JCS4	uncultured_Caudovirales_phage	7.7e-38	55.2
WP_150549368.1\|4424572_4424782_+\|tail	tail protein X	A0A2H4J946	uncultured_Caudovirales_phage	2.5e-28	82.6
WP_172970690.1\|4425237_4425561_+\|holin	phage holin, lambda family	A0A2H4JFM8	uncultured_Caudovirales_phage	3.4e-16	38.5
WP_150549370.1\|4425557_4426400_+	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	1.5e-92	66.8
WP_150549371.1\|4426396_4426840_+	DUF2570 domain-containing protein	Q9ZXL5	Pseudomonas_virus	1.9e-17	40.6
WP_150549372.1\|4426942_4427422_+\|tail	phage tail protein	A0A2H4J906	uncultured_Caudovirales_phage	2.3e-61	74.5
WP_150549717.1\|4427418_4427889_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	2.6e-33	67.8
WP_150549373.1\|4427963_4428440_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	3.1e-42	66.4
WP_150549374.1\|4428439_4428733_+	PAAR domain-containing protein	K4ICQ1	Acidithiobacillus_phage	7.3e-26	61.5
WP_150549375.1\|4428735_4429089_+	GPW/gp25 family protein	A0A2H4JE52	uncultured_Caudovirales_phage	1.9e-44	80.7
WP_150549376.1\|4429085_4430000_+\|plate	baseplate J/gp47 family protein	Q9ZXK8	Pseudomonas_virus	4.0e-115	74.2
WP_150549377.1\|4429996_4430611_+\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	4.4e-73	67.8
WP_150549378.1\|4430607_4431630_+\|tail	phage tail protein	F1BUP1	Erwinia_phage	2.9e-53	65.8
WP_150549379.1\|4431631_4432219_+	hypothetical protein	A0A2H4J924	uncultured_Caudovirales_phage	2.2e-34	64.0
WP_150549380.1\|4432395_4433586_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A2H4JCP8	uncultured_Caudovirales_phage	2.4e-184	82.1
WP_150549381.1\|4433644_4434160_+\|tail	phage major tail tube protein	A0A2H4J916	uncultured_Caudovirales_phage	3.3e-82	86.5
WP_150549382.1\|4434239_4434542_+\|tail	phage tail assembly protein	A0A2H4J944	uncultured_Caudovirales_phage	1.5e-29	72.3
WP_150549383.1\|4434550_4434673_+\|tail	GpE family phage tail protein	A0A2H4JFK5	uncultured_Caudovirales_phage	6.5e-13	85.0
WP_150549384.1\|4434662_4437224_+\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	5.2e-285	67.2
WP_150549385.1\|4437232_4437673_+\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	1.5e-67	87.0
WP_150549386.1\|4437669_4438917_+	phage late control D family protein	A0A2H4JAV0	uncultured_Caudovirales_phage	5.4e-179	74.3
WP_150549387.1\|4439037_4440126_-	acyltransferase family protein	Q716G0	Shigella_phage	3.2e-10	26.9
WP_150549388.1\|4440284_4440470_-	hypothetical protein	NA	NA	NA	NA
WP_150549389.1\|4440576_4440816_-	helix-turn-helix transcriptional regulator	A0A2H4J926	uncultured_Caudovirales_phage	2.3e-14	53.2
WP_150549390.1\|4440806_4441139_-	DUF2511 domain-containing protein	A0A2H4JCQ9	uncultured_Caudovirales_phage	4.1e-25	57.3
WP_150549391.1\|4441156_4441516_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	5.8e-17	40.4
WP_150549392.1\|4441597_4441837_+	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	6.2e-07	45.2
WP_150549393.1\|4441840_4442311_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	5.2e-50	63.4
WP_150549394.1\|4442307_4442610_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_150549395.1\|4442606_4442984_+	hypothetical protein	NA	NA	NA	NA
WP_150549396.1\|4443052_4443292_+	hypothetical protein	A0A2H4JGL7	uncultured_Caudovirales_phage	9.1e-19	59.7
WP_150549397.1\|4443297_4446012_+	toprim domain-containing protein	A0A2H4J936	uncultured_Caudovirales_phage	0.0e+00	77.5
WP_150549398.1\|4446245_4446458_+	hypothetical protein	NA	NA	NA	NA
WP_172970691.1\|4446533_4446881_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	4.7e-24	60.2
WP_150549399.1\|4446976_4447237_+	hypothetical protein	NA	NA	NA	NA
WP_150549400.1\|4447239_4447842_+	hypothetical protein	NA	NA	NA	NA
WP_150549401.1\|4447834_4448053_+	hypothetical protein	Q9ZXI5	Pseudomonas_virus	8.1e-06	44.4
WP_150549402.1\|4448042_4448258_+	hypothetical protein	A0A2H4JE76	uncultured_Caudovirales_phage	6.7e-13	60.6
WP_150549403.1\|4448352_4449519_+	DUF3596 domain-containing protein	A0A2H4JGM5	uncultured_Caudovirales_phage	2.1e-169	72.8
WP_069898591.1\|4450271_4451126_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	6.4e-30	33.9
WP_150549404.1\|4451205_4452036_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A126HHM5	Vibrio_phage	3.5e-33	39.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR215729

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection