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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LR593886 Gemmata massiliana isolate Soil9 chromosome 1 27 crisprs csa3,RT,cas1,cas2,cas3,cas8u2,cas7,cas5u,DinG,cas8u1,DEDDh,PD-DExK,csb2gr5 0 39 16 0

Results visualization

1. NZ_LR593886
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_2 1140255-1140342 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_1 1139991-1140079 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_3 1373844-1375187 Orphan NA
18 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_4 1537875-1537952 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_5 2070914-2071015 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_6 2979467-2979563 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_7 2979755-2979853 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_8 3029932-3030671 Orphan NA
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_11 3031722-3031817 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_9 3031002-3031170 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_10 3031434-3031602 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_12 3209200-3209300 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_13 3332236-3332346 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_14 3351857-3351965 Unclear NA
1 spacers
cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_15 3368019-3369513 Unclear NA
20 spacers
cas5u,cas7,cas8u2,cas3,cas2,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_16 3370694-3377796 Unclear NA
97 spacers
cas5u,cas7,cas8u2,cas3,cas2,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_17 4923108-4923187 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_18 5002323-5002393 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_19 5381674-5381771 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_20 7069326-7069492 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_21 7283945-7284072 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_22 8288223-8288341 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_23 8419356-8419457 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_24 9109972-9116888 Unclear NA
94 spacers
cas3,csb2gr5,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_25 9355287-9355394 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_27 9566491-9566657 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR593886_26 9565915-9566370 Orphan NA
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LR593886_4 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder 1537901-1537926 26 NZ_CP017941 Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence 514947-514972 5 0.808
NZ_LR593886_4 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder 1537901-1537926 26 NZ_CP035936 Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence 36828-36853 5 0.808
NZ_LR593886_4 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder 1537901-1537926 26 NZ_CP007256 Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence 30233-30258 6 0.769
NZ_LR593886_17 17.1|4923134|28|NZ_LR593886|CRISPRCasFinder 4923134-4923161 28 NZ_LR594692 Variovorax sp. WDL1 plasmid 4 157672-157699 6 0.786
NZ_LR593886_4 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder 1537901-1537926 26 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 1779633-1779658 7 0.731
NZ_LR593886_4 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder 1537901-1537926 26 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 1847676-1847701 7 0.731
NZ_LR593886_15 15.11|3368784|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 3368784-3368819 36 NZ_CP014942 Rhodococcus sp. BH4 plasmid, complete sequence 267589-267624 7 0.806
NZ_LR593886_16 16.2|3370803|35|NZ_LR593886|CRISPRCasFinder,CRT,PILER-CR 3370803-3370837 35 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1729654-1729688 7 0.8
NZ_LR593886_16 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT 3375113-3375147 35 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 151448-151482 7 0.8
NZ_LR593886_16 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT 3375113-3375147 35 NC_010311 Streptomyces sp. HK1 plasmid pSHK1, complete sequence 24561-24595 7 0.8
NZ_LR593886_16 16.128|3375144|35|NZ_LR593886|PILER-CR 3375144-3375178 35 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 151448-151482 7 0.8
NZ_LR593886_16 16.128|3375144|35|NZ_LR593886|PILER-CR 3375144-3375178 35 NC_010311 Streptomyces sp. HK1 plasmid pSHK1, complete sequence 24561-24595 7 0.8
NZ_LR593886_3 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374170-1374205 36 NC_021772 Salmonella phage FSL SP-058, complete genome 4906-4941 8 0.778
NZ_LR593886_3 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374388-1374421 34 MN694166 Marine virus AFVG_250M162, complete genome 28645-28678 8 0.765
NZ_LR593886_3 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374388-1374421 34 MN693793 Marine virus AFVG_250M161, complete genome 4632-4665 8 0.765
NZ_LR593886_3 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374388-1374421 34 MN694067 Marine virus AFVG_250M160, complete genome 28618-28651 8 0.765
NZ_LR593886_15 15.6|3368425|35|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 3368425-3368459 35 NZ_CP023000 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence 152105-152139 8 0.771
NZ_LR593886_15 15.18|3369296|35|NZ_LR593886|CRISPRCasFinder,CRT,PILER-CR 3369296-3369330 35 NC_008270 Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence 318389-318423 8 0.771
NZ_LR593886_16 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT 3375113-3375147 35 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 187018-187052 8 0.771
NZ_LR593886_16 16.90|3377215|37|NZ_LR593886|CRISPRCasFinder,CRT 3377215-3377251 37 NZ_LN832562 Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence 178482-178518 8 0.784
NZ_LR593886_16 16.128|3375144|35|NZ_LR593886|PILER-CR 3375144-3375178 35 LN997843 Streptomyces reticuli genome assembly TUE45, plasmid : II 187018-187052 8 0.771
NZ_LR593886_16 16.157|3377275|37|NZ_LR593886|PILER-CR 3377275-3377311 37 NZ_LN832562 Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence 178482-178518 8 0.784
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 EU849489 Stenotrophomonas phage S1, complete genome 36000-36036 8 0.784
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 EU849489 Stenotrophomonas phage S1, complete genome 36000-36036 8 0.784
NZ_LR593886_3 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374388-1374421 34 NC_017976 Bacillus phage PBC1, complete genome 17199-17232 9 0.735
NZ_LR593886_3 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374388-1374421 34 MN694035 Marine virus AFVG_250M163, complete genome 28861-28894 9 0.735
NZ_LR593886_15 15.2|3368129|35|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 3368129-3368163 35 NZ_CP016283 Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence 44420-44454 9 0.743
NZ_LR593886_15 15.3|3368200|38|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 3368200-3368237 38 NZ_CP048424 Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence 172674-172711 9 0.763
NZ_LR593886_16 16.71|3375835|34|NZ_LR593886|CRISPRCasFinder,CRT 3375835-3375868 34 NZ_CP045122 Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence 257894-257927 9 0.735
NZ_LR593886_16 16.92|3377362|41|NZ_LR593886|CRT 3377362-3377402 41 NC_023068 Streptomyces sp. F11 plasmid pFP12, complete sequence 5208-5248 9 0.78
NZ_LR593886_16 16.138|3375876|34|NZ_LR593886|PILER-CR 3375876-3375909 34 NZ_CP045122 Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence 257894-257927 9 0.735
NZ_LR593886_16 16.159|3377424|41|NZ_LR593886|PILER-CR 3377424-3377464 41 NC_023068 Streptomyces sp. F11 plasmid pFP12, complete sequence 5208-5248 9 0.78
NZ_LR593886_24 24.66|9114763|37|NZ_LR593886|CRISPRCasFinder,CRT 9114763-9114799 37 MN304823 Phage 65_10, complete genome 15577-15613 9 0.757
NZ_LR593886_24 24.80|9115795|36|NZ_LR593886|CRISPRCasFinder,CRT 9115795-9115830 36 MN175603 Microbacterium phage Tyrumbra, complete genome 39282-39317 9 0.75
NZ_LR593886_24 24.80|9115795|36|NZ_LR593886|CRISPRCasFinder,CRT 9115795-9115830 36 MH271312 Microbacterium phage RobsFeet, complete genome 39423-39458 9 0.75
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 MN587875 Mycolicibacterium sp. strain CBMA213 plasmid pCBMA213_3, complete sequence 11943-11979 9 0.757
NZ_LR593886_24 24.160|9114764|37|NZ_LR593886|PILER-CR 9114764-9114800 37 MN304823 Phage 65_10, complete genome 15577-15613 9 0.757
NZ_LR593886_24 24.174|9115796|36|NZ_LR593886|PILER-CR 9115796-9115831 36 MN175603 Microbacterium phage Tyrumbra, complete genome 39282-39317 9 0.75
NZ_LR593886_24 24.174|9115796|36|NZ_LR593886|PILER-CR 9115796-9115831 36 MH271312 Microbacterium phage RobsFeet, complete genome 39423-39458 9 0.75
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 MN587875 Mycolicibacterium sp. strain CBMA213 plasmid pCBMA213_3, complete sequence 11943-11979 9 0.757
NZ_LR593886_3 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374170-1374205 36 NC_049444 Klebsiella phage Pylas, complete genome 4003-4038 10 0.722
NZ_LR593886_3 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT 1374170-1374205 36 MN163281 Klebsiella phage KpCHEMY26, complete genome 66644-66679 10 0.722
NZ_LR593886_13 13.1|3332275|33|NZ_LR593886|CRISPRCasFinder 3332275-3332307 33 NZ_CP022999 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence 104604-104636 10 0.697
NZ_LR593886_16 16.82|3376637|36|NZ_LR593886|CRISPRCasFinder,CRT 3376637-3376672 36 NZ_CP011518 Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence 254732-254767 10 0.722
NZ_LR593886_16 16.89|3377145|34|NZ_LR593886|CRISPRCasFinder,CRT 3377145-3377178 34 NZ_CP033582 Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence 15984-16017 10 0.706
NZ_LR593886_16 16.149|3376689|36|NZ_LR593886|PILER-CR 3376689-3376724 36 NZ_CP011518 Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence 254732-254767 10 0.722
NZ_LR593886_16 16.156|3377204|34|NZ_LR593886|PILER-CR 3377204-3377237 34 NZ_CP033582 Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence 15984-16017 10 0.706
NZ_LR593886_24 24.7|9110450|35|NZ_LR593886|CRISPRCasFinder,CRT 9110450-9110484 35 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 553314-553348 10 0.714
NZ_LR593886_24 24.19|9111329|37|NZ_LR593886|CRISPRCasFinder,CRT 9111329-9111365 37 NC_018583 Gordonia sp. KTR9 plasmid pGKT3, complete sequence 154901-154937 10 0.73
NZ_LR593886_24 24.52|9113743|36|NZ_LR593886|CRISPRCasFinder,CRT 9113743-9113778 36 MH617115 Siphoviridae sp. isolate ctjh_2, complete genome 37142-37177 10 0.722
NZ_LR593886_24 24.68|9114913|36|NZ_LR593886|CRISPRCasFinder,CRT 9114913-9114948 36 MH617115 Siphoviridae sp. isolate ctjh_2, complete genome 37142-37177 10 0.722
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP016082 Streptomyces sp. SAT1 plasmid unnamed2, complete sequence 82803-82839 10 0.73
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP015116 Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence 1493152-1493188 10 0.73
NZ_LR593886_24 24.101|9110451|35|NZ_LR593886|PILER-CR 9110451-9110485 35 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 553314-553348 10 0.714
NZ_LR593886_24 24.113|9111330|37|NZ_LR593886|PILER-CR 9111330-9111366 37 NC_018583 Gordonia sp. KTR9 plasmid pGKT3, complete sequence 154901-154937 10 0.73
NZ_LR593886_24 24.146|9113744|36|NZ_LR593886|PILER-CR 9113744-9113779 36 MH617115 Siphoviridae sp. isolate ctjh_2, complete genome 37142-37177 10 0.722
NZ_LR593886_24 24.162|9114914|36|NZ_LR593886|PILER-CR 9114914-9114949 36 MH617115 Siphoviridae sp. isolate ctjh_2, complete genome 37142-37177 10 0.722
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP016082 Streptomyces sp. SAT1 plasmid unnamed2, complete sequence 82803-82839 10 0.73
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP015116 Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence 1493152-1493188 10 0.73
NZ_LR593886_16 16.89|3377145|34|NZ_LR593886|CRISPRCasFinder,CRT 3377145-3377178 34 NZ_CP013855 Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence 71530-71563 11 0.676
NZ_LR593886_16 16.156|3377204|34|NZ_LR593886|PILER-CR 3377204-3377237 34 NZ_CP013855 Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence 71530-71563 11 0.676
NZ_LR593886_24 24.22|9111549|36|NZ_LR593886|CRISPRCasFinder,CRT 9111549-9111584 36 NZ_CP022992 Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence 69753-69788 11 0.694
NZ_LR593886_24 24.22|9111549|36|NZ_LR593886|CRISPRCasFinder,CRT 9111549-9111584 36 CP000618 Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence 221212-221247 11 0.694
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP049790 Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence 817996-818032 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP049794 Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence 1853846-1853882 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP049792 Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence 1629007-1629043 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP016915 Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence 1413507-1413543 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP045412 Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence 89679-89715 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP025986 Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence 1748708-1748744 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP009763 Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence 1208923-1208959 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052085 Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052087 Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052127 Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052089 Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence 1296108-1296144 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052131 Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence 1296103-1296139 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052111 Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence 721300-721336 11 0.703
NZ_LR593886_24 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT 9116162-9116198 37 NZ_CP052113 Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence 721300-721336 11 0.703
NZ_LR593886_24 24.116|9111550|36|NZ_LR593886|PILER-CR 9111550-9111585 36 NZ_CP022992 Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence 69753-69788 11 0.694
NZ_LR593886_24 24.116|9111550|36|NZ_LR593886|PILER-CR 9111550-9111585 36 CP000618 Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence 221212-221247 11 0.694
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP049790 Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence 817996-818032 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP049794 Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence 1853846-1853882 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP049792 Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence 1629007-1629043 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP016915 Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence 1413507-1413543 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP045412 Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence 89679-89715 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP025986 Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence 1748708-1748744 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP009763 Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence 1208923-1208959 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052085 Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052087 Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052127 Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence 1296104-1296140 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052089 Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence 1296108-1296144 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052131 Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence 1296103-1296139 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052111 Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence 721300-721336 11 0.703
NZ_LR593886_24 24.179|9116163|37|NZ_LR593886|PILER-CR 9116163-9116199 37 NZ_CP052113 Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence 721300-721336 11 0.703

1. spacer 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

agaggttgccgtggtttccggtgacc	CRISPR spacer
agcgggtgccgtggtttccggtgtga	Protospacer
** ** *****************   

2. spacer 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder matches to NZ_CP035936 (Acinetobacter cumulans strain WCHAc060092 plasmid p1_060092, complete sequence) position: , mismatch: 5, identity: 0.808

agaggttgccgtggtttccggtgacc	CRISPR spacer
catggttgccgtggtttccgataacc	Protospacer
 . *****************.*.***

3. spacer 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder matches to NZ_CP007256 (Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence) position: , mismatch: 6, identity: 0.769

agaggttgccgtggtttccggtgacc	CRISPR spacer
ctgggttgccgtggcttccggtgaag	Protospacer
  .***********.*********  

4. spacer 17.1|4923134|28|NZ_LR593886|CRISPRCasFinder matches to NZ_LR594692 (Variovorax sp. WDL1 plasmid 4) position: , mismatch: 6, identity: 0.786

ggctggcgttggcacctcgtcttcaaaa	CRISPR spacer
ggctggcgttggcgcctcgtcgacggga	Protospacer
*************.*******  *...*

5. spacer 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.731

agaggttgccgtggtttccggtgacc	CRISPR spacer
tccagttgccgtggtttccggtgcag	Protospacer
   .*******************   

6. spacer 4.1|1537901|26|NZ_LR593886|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 7, identity: 0.731

agaggttgccgtggtttccggtgacc	CRISPR spacer
tccagttgccgtggtttccggtgcag	Protospacer
   .*******************   

7. spacer 15.11|3368784|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 7, identity: 0.806

tcccggccgtgacgatcaggaccgacgcggtgtcgt-	CRISPR spacer
tgacggccatgacgatcaggaacgacgc-gtatcgcg	Protospacer
*  *****.************ ****** **.***. 

8. spacer 16.2|3370803|35|NZ_LR593886|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.8

-agcgtgtgcctgccggcgtggttgtgggcgtccga	CRISPR spacer
cagcg-gtggctgccggcgtggctgtgggcgccgct	Protospacer
 **** *** ************.********.*   

9. spacer 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.8

tcgatgtgtc-----cgtactcgcgcccgtcatcgagcac	CRISPR spacer
-----gtgtcgaccacgtacttgcgcacgtcatcgagcac	Protospacer
     *****     ******.**** *************

10. spacer 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 7, identity: 0.8

---tcgatgtgtccgtactcgcgcccgtcatcgagcac	CRISPR spacer
tgctcgacg---acgtactcgcgcacgtcgtcgagcac	Protospacer
   ****.*    *********** ****.********

11. spacer 16.128|3375144|35|NZ_LR593886|PILER-CR matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.8

tcgatgtgtc-----cgtactcgcgcccgtcatcgagcac	CRISPR spacer
-----gtgtcgaccacgtacttgcgcacgtcatcgagcac	Protospacer
     *****     ******.**** *************

12. spacer 16.128|3375144|35|NZ_LR593886|PILER-CR matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 7, identity: 0.8

---tcgatgtgtccgtactcgcgcccgtcatcgagcac	CRISPR spacer
tgctcgacg---acgtactcgcgcacgtcgtcgagcac	Protospacer
   ****.*    *********** ****.********

13. spacer 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NC_021772 (Salmonella phage FSL SP-058, complete genome) position: , mismatch: 8, identity: 0.778

tccctgtaaccaagaggatatcacaatgtcaaagag	CRISPR spacer
tacttcaatccaagaggatatcattatgtcaaagaa	Protospacer
* *.*  * **************. **********.

14. spacer 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to MN694166 (Marine virus AFVG_250M162, complete genome) position: , mismatch: 8, identity: 0.765

gcaactcagtgaacgcatccgccca-tatatcggc	CRISPR spacer
ccaactcactgaacgcatccgcccaccgcaccga-	Protospacer
 ******* **************** ...*.**. 

15. spacer 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to MN693793 (Marine virus AFVG_250M161, complete genome) position: , mismatch: 8, identity: 0.765

gcaactcagtgaacgcatccgccca-tatatcggc	CRISPR spacer
ccaactcactgaacgcatccgcccaccgcaccga-	Protospacer
 ******* **************** ...*.**. 

16. spacer 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to MN694067 (Marine virus AFVG_250M160, complete genome) position: , mismatch: 8, identity: 0.765

gcaactcagtgaacgcatccgccca-tatatcggc	CRISPR spacer
ccaactcactgaacgcatccgcccaccgcaccga-	Protospacer
 ******* **************** ...*.**. 

17. spacer 15.6|3368425|35|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.771

caggctaatcagttgttgacgccgctgctgatcga	CRISPR spacer
cacgaccagaagatgttcacgccgctgctgatcga	Protospacer
** * . *  ** **** *****************

18. spacer 15.18|3369296|35|NZ_LR593886|CRISPRCasFinder,CRT,PILER-CR matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 8, identity: 0.771

ttccgccgtggggaggaggccgaaggatcgtattg	CRISPR spacer
ctgcgccgtgagcaggaggccgaaggattcgattc	Protospacer
.* *******.* ***************.  *** 

19. spacer 16.61|3375113|35|NZ_LR593886|CRISPRCasFinder,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 8, identity: 0.771

tcgatgtgtccgtactcgcgcccgtcatcgagcac	CRISPR spacer
ttgtcgaccacgtactcgcgcacgtcatcgagcac	Protospacer
*.* .*  . *********** *************

20. spacer 16.90|3377215|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.784

cttggccgcagccttcaggctggcgcccatccgctta--	CRISPR spacer
gttggtcgccgccttcaggctggcgcc--gccgcccagc	Protospacer
 ****.*** *****************   ****..*  

21. spacer 16.128|3375144|35|NZ_LR593886|PILER-CR matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 8, identity: 0.771

tcgatgtgtccgtactcgcgcccgtcatcgagcac	CRISPR spacer
ttgtcgaccacgtactcgcgcacgtcatcgagcac	Protospacer
*.* .*  . *********** *************

22. spacer 16.157|3377275|37|NZ_LR593886|PILER-CR matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 8, identity: 0.784

cttggccgcagccttcaggctggcgcccatccgctta--	CRISPR spacer
gttggtcgccgccttcaggctggcgcc--gccgcccagc	Protospacer
 ****.*** *****************   ****..*  

23. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to EU849489 (Stenotrophomonas phage S1, complete genome) position: , mismatch: 8, identity: 0.784

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
ggcgaccttgaccgccaccggcatcgccgccgccgag	Protospacer
 * * ** . ****************** **.*****

24. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to EU849489 (Stenotrophomonas phage S1, complete genome) position: , mismatch: 8, identity: 0.784

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
ggcgaccttgaccgccaccggcatcgccgccgccgag	Protospacer
 * * ** . ****************** **.*****

25. spacer 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NC_017976 (Bacillus phage PBC1, complete genome) position: , mismatch: 9, identity: 0.735

gcaactcagtgaacgcatccgcccatatatcggc	CRISPR spacer
ttatctgagtgaccgcatccgcccatatatgatt	Protospacer
 .* ** ***** ***************** . .

26. spacer 3.8|1374388|34|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to MN694035 (Marine virus AFVG_250M163, complete genome) position: , mismatch: 9, identity: 0.735

gcaactcagtgaacgcatccgccca-tatatcggc	CRISPR spacer
ccaactcactgaacgcatcggcccaccgcaccga-	Protospacer
 ******* ********** ***** ...*.**. 

27. spacer 15.2|3368129|35|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016283 (Cryobacterium arcticum strain PAMC 27867 plasmid pP27867_1, complete sequence) position: , mismatch: 9, identity: 0.743

aatttggagatcgcttcgatgccgagcatgacctc	CRISPR spacer
gctgccgtcatcgctttgatgccgagcctgacctc	Protospacer
. * . *  *******.********** *******

28. spacer 15.3|3368200|38|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048424 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.763

cgaagcggcagggcaaccaccaccgtcgccccgccgag--	CRISPR spacer
cacagcggcagggcaagcgccaccgtcg--ccagcgacac	Protospacer
*. ************* *.*********  **. ***   

29. spacer 16.71|3375835|34|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

tgccgcgcgacgggttggggtactccatcccgaa	CRISPR spacer
cgccgcgcaacgggtcggggtactcatcgccggg	Protospacer
.*******.******.*********  . ***..

30. spacer 16.92|3377362|41|NZ_LR593886|CRT matches to NC_023068 (Streptomyces sp. F11 plasmid pFP12, complete sequence) position: , mismatch: 9, identity: 0.78

ccgtgtgggcggcccgctccttcaccagcgc-----gccgcgggtg	CRISPR spacer
ccgcgtgggcggcccgctccttctccagctccagctcccgc-----	Protospacer
***.******************* ***** *      ****     

31. spacer 16.138|3375876|34|NZ_LR593886|PILER-CR matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

tgccgcgcgacgggttggggtactccatcccgaa	CRISPR spacer
cgccgcgcaacgggtcggggtactcatcgccggg	Protospacer
.*******.******.*********  . ***..

32. spacer 16.159|3377424|41|NZ_LR593886|PILER-CR matches to NC_023068 (Streptomyces sp. F11 plasmid pFP12, complete sequence) position: , mismatch: 9, identity: 0.78

ccgtgtgggcggcccgctccttcaccagcgc-----gccgcgggtg	CRISPR spacer
ccgcgtgggcggcccgctccttctccagctccagctcccgc-----	Protospacer
***.******************* ***** *      ****     

33. spacer 24.66|9114763|37|NZ_LR593886|CRISPRCasFinder,CRT matches to MN304823 (Phage 65_10, complete genome) position: , mismatch: 9, identity: 0.757

tcagcttgttgttggtgtcgtcccagtacaccttcgc	CRISPR spacer
tgcaacgcttgttggtgttgtcccagtacgccttcgc	Protospacer
*  . .  **********.**********.*******

34. spacer 24.80|9115795|36|NZ_LR593886|CRISPRCasFinder,CRT matches to MN175603 (Microbacterium phage Tyrumbra, complete genome) position: , mismatch: 9, identity: 0.75

gaggcgacaccttcgacggggaaatcgctcgtaatc	CRISPR spacer
tcggcgacaccatcgacgcggaaatcgctcgcctca	Protospacer
  ********* ****** ************.  . 

35. spacer 24.80|9115795|36|NZ_LR593886|CRISPRCasFinder,CRT matches to MH271312 (Microbacterium phage RobsFeet, complete genome) position: , mismatch: 9, identity: 0.75

gaggcgacaccttcgacggggaaatcgctcgtaatc	CRISPR spacer
tcggcgacaccatcgacgcggaaatcgctcgcctca	Protospacer
  ********* ****** ************.  . 

36. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to MN587875 (Mycolicibacterium sp. strain CBMA213 plasmid pCBMA213_3, complete sequence) position: , mismatch: 9, identity: 0.757

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
tcccgccgccaccgccgccggcatcgccaccaccggc	Protospacer
.    ***********.*********** ******. 

37. spacer 24.160|9114764|37|NZ_LR593886|PILER-CR matches to MN304823 (Phage 65_10, complete genome) position: , mismatch: 9, identity: 0.757

tcagcttgttgttggtgtcgtcccagtacaccttcgc	CRISPR spacer
tgcaacgcttgttggtgttgtcccagtacgccttcgc	Protospacer
*  . .  **********.**********.*******

38. spacer 24.174|9115796|36|NZ_LR593886|PILER-CR matches to MN175603 (Microbacterium phage Tyrumbra, complete genome) position: , mismatch: 9, identity: 0.75

gaggcgacaccttcgacggggaaatcgctcgtaatc	CRISPR spacer
tcggcgacaccatcgacgcggaaatcgctcgcctca	Protospacer
  ********* ****** ************.  . 

39. spacer 24.174|9115796|36|NZ_LR593886|PILER-CR matches to MH271312 (Microbacterium phage RobsFeet, complete genome) position: , mismatch: 9, identity: 0.75

gaggcgacaccttcgacggggaaatcgctcgtaatc	CRISPR spacer
tcggcgacaccatcgacgcggaaatcgctcgcctca	Protospacer
  ********* ****** ************.  . 

40. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to MN587875 (Mycolicibacterium sp. strain CBMA213 plasmid pCBMA213_3, complete sequence) position: , mismatch: 9, identity: 0.757

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
tcccgccgccaccgccgccggcatcgccaccaccggc	Protospacer
.    ***********.*********** ******. 

41. spacer 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to NC_049444 (Klebsiella phage Pylas, complete genome) position: , mismatch: 10, identity: 0.722

tccctgtaaccaagaggatatcacaatgtcaaagag	CRISPR spacer
gttgtcaatccaagaggatatcaatatgtcaaagaa	Protospacer
 .. *  * **************  **********.

42. spacer 3.5|1374170|36|NZ_LR593886|PILER-CR,CRISPRCasFinder,CRT matches to MN163281 (Klebsiella phage KpCHEMY26, complete genome) position: , mismatch: 10, identity: 0.722

tccctgtaaccaagaggatatcacaatgtcaaagag	CRISPR spacer
gttgtcaatccaagaggatatcaatatgtcaaagaa	Protospacer
 .. *  * **************  **********.

43. spacer 13.1|3332275|33|NZ_LR593886|CRISPRCasFinder matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 10, identity: 0.697

ttggatggggcgacggatacgctcaccgtcgtc	CRISPR spacer
atggatggggcgacgggcacgctcatgccaata	Protospacer
 ***************..*******.  . .* 

44. spacer 16.82|3376637|36|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 10, identity: 0.722

cgagccaggttgtcgatctggccggctaacatgatc----	CRISPR spacer
cgcgccaggtggtcgatctggccgg----cgtggcgctgg	Protospacer
** ******* **************    *.**..     

45. spacer 16.89|3377145|34|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 10, identity: 0.706

gtcctcgccgcgttcggcaccccgccttcaatca	CRISPR spacer
gtcgtcgccgcgttcggtaccccgtcgatgttgt	Protospacer
*** *************.******.*  .. *  

46. spacer 16.149|3376689|36|NZ_LR593886|PILER-CR matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 10, identity: 0.722

cgagccaggttgtcgatctggccggctaacatgatc----	CRISPR spacer
cgcgccaggtggtcgatctggccgg----cgtggcgctgg	Protospacer
** ******* **************    *.**..     

47. spacer 16.156|3377204|34|NZ_LR593886|PILER-CR matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 10, identity: 0.706

gtcctcgccgcgttcggcaccccgccttcaatca	CRISPR spacer
gtcgtcgccgcgttcggtaccccgtcgatgttgt	Protospacer
*** *************.******.*  .. *  

48. spacer 24.7|9110450|35|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.714

caggacttccccaacgacatcacgaaccagggaaa	CRISPR spacer
accgaaccagccaacgacatcacgaaccatggcaa	Protospacer
   ** ..  ******************* ** **

49. spacer 24.19|9111329|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 10, identity: 0.73

gggaatgggccgaagcgatccgcgagatccgcaacct	CRISPR spacer
tcgacgacaacgaagccacccgcgagatccgcaacct	Protospacer
  **  . . ****** *.******************

50. spacer 24.52|9113743|36|NZ_LR593886|CRISPRCasFinder,CRT matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 10, identity: 0.722

atgcggatcagcgacttcagcgccgagcagatcaag	CRISPR spacer
cggcggatcagcgacatcagcgcggagccttccggg	Protospacer
  ************* ******* ****   .*..*

51. spacer 24.68|9114913|36|NZ_LR593886|CRISPRCasFinder,CRT matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 10, identity: 0.722

atgcggatcagcgacttcagcgccgagcagatcaag	CRISPR spacer
cggcggatcagcgacatcagcgcggagccttccggg	Protospacer
  ************* ******* ****   .*..*

52. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.73

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
cgccaccgccaccgccatcggcaccgccccctcgccc	Protospacer
**   ************.*****.******* *    

53. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
cgccaccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
**   *************** ****** ***.*    

54. spacer 24.101|9110451|35|NZ_LR593886|PILER-CR matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.714

caggacttccccaacgacatcacgaaccagggaaa	CRISPR spacer
accgaaccagccaacgacatcacgaaccatggcaa	Protospacer
   ** ..  ******************* ** **

55. spacer 24.113|9111330|37|NZ_LR593886|PILER-CR matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 10, identity: 0.73

gggaatgggccgaagcgatccgcgagatccgcaacct	CRISPR spacer
tcgacgacaacgaagccacccgcgagatccgcaacct	Protospacer
  **  . . ****** *.******************

56. spacer 24.146|9113744|36|NZ_LR593886|PILER-CR matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 10, identity: 0.722

atgcggatcagcgacttcagcgccgagcagatcaag	CRISPR spacer
cggcggatcagcgacatcagcgcggagccttccggg	Protospacer
  ************* ******* ****   .*..*

57. spacer 24.162|9114914|36|NZ_LR593886|PILER-CR matches to MH617115 (Siphoviridae sp. isolate ctjh_2, complete genome) position: , mismatch: 10, identity: 0.722

atgcggatcagcgacttcagcgccgagcagatcaag	CRISPR spacer
cggcggatcagcgacatcagcgcggagccttccggg	Protospacer
  ************* ******* ****   .*..*

58. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.73

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
cgccaccgccaccgccatcggcaccgccccctcgccc	Protospacer
**   ************.*****.******* *    

59. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
cgccaccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
**   *************** ****** ***.*    

60. spacer 16.89|3377145|34|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 11, identity: 0.676

gtcctcgccgcgttcggcaccccgccttcaatca	CRISPR spacer
cgcctggccgcgctcggcaccccgccggtcctgg	Protospacer
  *** ******.*************  .  * .

61. spacer 16.156|3377204|34|NZ_LR593886|PILER-CR matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 11, identity: 0.676

gtcctcgccgcgttcggcaccccgccttcaatca	CRISPR spacer
cgcctggccgcgctcggcaccccgccggtcctgg	Protospacer
  *** ******.*************  .  * .

62. spacer 24.22|9111549|36|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 11, identity: 0.694

gaagctgcgcaggtgctgctcggacacgcgaacatc	CRISPR spacer
ccggctgcgcaggcgctgctcgggcacgcatcggtg	Protospacer
  .**********.*********.*****.   .* 

63. spacer 24.22|9111549|36|NZ_LR593886|CRISPRCasFinder,CRT matches to CP000618 (Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence) position: , mismatch: 11, identity: 0.694

gaagctgcgcaggtgctgctcggacacgcgaacatc	CRISPR spacer
ccggctgcgcaggcgctgctcgggcacgcatcggtg	Protospacer
  .**********.*********.*****.   .* 

64. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

65. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

66. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

67. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

68. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP045412 (Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgcc-------accgccaccggcatcgcccccaccgag	CRISPR spacer
-------gtcctgatagaccggcaccgggatcgcccccaccgat	Protospacer
       *.*       **** ****** ************** 

69. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

70. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

71. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

72. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

73. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

74. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

75. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

76. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

77. spacer 24.85|9116162|37|NZ_LR593886|CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

78. spacer 24.116|9111550|36|NZ_LR593886|PILER-CR matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 11, identity: 0.694

gaagctgcgcaggtgctgctcggacacgcgaacatc	CRISPR spacer
ccggctgcgcaggcgctgctcgggcacgcatcggtg	Protospacer
  .**********.*********.*****.   .* 

79. spacer 24.116|9111550|36|NZ_LR593886|PILER-CR matches to CP000618 (Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence) position: , mismatch: 11, identity: 0.694

gaagctgcgcaggtgctgctcggacacgcgaacatc	CRISPR spacer
ccggctgcgcaggcgctgctcgggcacgcatcggtg	Protospacer
  .**********.*********.*****.   .* 

80. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

81. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

82. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

83. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

84. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP045412 (Roseovarius sp. THAF8 plasmid pTHAF8_b, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgcc-------accgccaccggcatcgcccccaccgag	CRISPR spacer
-------gtcctgatagaccggcaccgggatcgcccccaccgat	Protospacer
       *.*       **** ****** ************** 

85. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

86. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

87. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

88. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

89. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

90. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

91. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

92. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

93. spacer 24.179|9116163|37|NZ_LR593886|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.703

cgagtccgccaccgccaccggcatcgcccccaccgag	CRISPR spacer
gcatcccgccaccgccaccgccatcgcgcccgcgcct	Protospacer
  * .*************** ****** ***.*    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1151095 : 1189240 45 Microcystis_phage(60.0%) integrase,transposase attL 1135441:1135458|attR 1176994:1177011
DBSCAN-SWA_2 1673555 : 1731363 51 Pseudomonas_phage(33.33%) transposase,protease,integrase,head,tail attL 1676743:1676758|attR 1727092:1727107
DBSCAN-SWA_3 2056768 : 2113187 41 Pandoravirus(40.0%) transposase NA
DBSCAN-SWA_4 2356578 : 2367085 6 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_5 2474494 : 2528507 60 uncultured_Mediterranean_phage(40.0%) terminase,integrase,portal,transposase attL 2501588:2501606|attR 2521754:2521772
DBSCAN-SWA_6 2586944 : 2656333 55 Halovirus(66.67%) integrase,tail,plate,transposase attL 2580081:2580096|attR 2641469:2641484
DBSCAN-SWA_7 3057523 : 3083322 22 Orpheovirus(33.33%) integrase,transposase attL 3055679:3055695|attR 3094143:3094159
DBSCAN-SWA_8 3369568 : 3449001 57 Ostreococcus_lucimarinus_virus(10.0%) transposase NA
DBSCAN-SWA_9 3922867 : 4018862 100 Bacillus_phage(33.33%) protease,integrase,portal,tail,capsid,head,transposase attL 3951595:3951611|attR 4018309:4018325
DBSCAN-SWA_10 4028671 : 4108586 59 Corynebacterium_phage(16.67%) integrase,transposase attL 4027804:4027822|attR 4096584:4096602
DBSCAN-SWA_11 4746974 : 4763999 16 Pandoravirus(50.0%) transposase NA
DBSCAN-SWA_12 5311368 : 5364261 48 uncultured_Mediterranean_phage(33.33%) terminase,integrase,portal,transposase attL 5343899:5343914|attR 5366953:5366968
DBSCAN-SWA_13 5560675 : 5621021 49 Staphylococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_14 7704632 : 7822765 113 Enterobacteria_phage(27.27%) tRNA,integrase,transposase attL 7694217:7694234|attR 7792537:7792552
DBSCAN-SWA_15 9236517 : 9283941 41 Wolbachia_phage(33.33%) protease,integrase,portal,terminase,transposase attL 9253865:9253880|attR 9275033:9275048
DBSCAN-SWA_16 9996540 : 10019881 31 Silicibacter_phage(25.0%) integrase,portal,terminase,capsid,head,tail attL 9991806:9991821|attR 10025549:10025564
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage