CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR594036	Streptococcus porcinus strain NCTC10710 chromosome 1	1 crisprs	WYL,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,cas3,RT,csm6,DinG	0	2	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594036_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594036_1

387801-388296

TypeI

I-C

Consensus_repeat	Method
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	PILER-CR
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	CRISPRCasFinder
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	CRT

7 spacers

cas2,cas1,cas4,cas7,cas8c,cas5

The CRISPR arrays of NZ_LR594036_1

>merge|NZ_LR594036|1|387801-388296|PILER-CR,CRISPRCasFinder,CRT
GTCTCACCCTTCACGGGTGAGTGGATTGAAATATATCGATAACGGGGTATTTACTAAAACACTTCGTCTCACCCTTCACGGGTGAGTGGATTGAAATTAATTCAGCATGACCGTCATCTTCAAAAATAAAAGTCTCACCCTTCACGGGTGAGTGGATTGAAATACCAAAAACTTCAATTTCAACCCCTTTTTCGATGGCGTCTCACCCTTCACGGGTGAGTGGATTGAAATTTGTTTGATTTCCATAACTCAGCTGTCAGAACTGATGTCTCACCCTTCACGGGTGAGTGGATTGAAATTCTATATCCGTTTATCACTTCTTCAAAACGTGTGTCTCACCCTTCACGGGTGAGTGGATTGAAATAATTGCTTTAATGTTTGCTTTGGGTGCTTTTTGTGTCTCACCCTTCACGGGTGAGTGGATTGAAATTAAGTTTGAATTAGACGCGATTATGGAGGGGCTTGTCTCACCCTTCATGGGTGAGTGGATTGAAAT

>NZ_LR594036|1|1|387801-388296|PILER-CR
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ATATCGATAACGGGGTATTTACTAAAACACTTC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAATTCAGCATGACCGTCATCTTCAAAAATAAAA
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ACCAAAAACTTCAATTTCAACCCCTTTTTCGATGGC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TTGTTTGATTTCCATAACTCAGCTGTCAGAACTGAT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TCTATATCCGTTTATCACTTCTTCAAAACGTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	AATTGCTTTAATGTTTGCTTTGGGTGCTTTTTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAAGTTTGAATTAGACGCGATTATGGAGGGGCTT
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT

>NZ_LR594036|1|1|387801-388296|CRISPRCasFinder
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ATATCGATAACGGGGTATTTACTAAAACACTTC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAATTCAGCATGACCGTCATCTTCAAAAATAAAA
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ACCAAAAACTTCAATTTCAACCCCTTTTTCGATGGC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TTGTTTGATTTCCATAACTCAGCTGTCAGAACTGAT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TCTATATCCGTTTATCACTTCTTCAAAACGTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	AATTGCTTTAATGTTTGCTTTGGGTGCTTTTTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAAGTTTGAATTAGACGCGATTATGGAGGGGCTT
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT

>NZ_LR594036|1|1|387801-388296|CRT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ATATCGATAACGGGGTATTTACTAAAACACTTC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAATTCAGCATGACCGTCATCTTCAAAAATAAAA
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	ACCAAAAACTTCAATTTCAACCCCTTTTTCGATGGC
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TTGTTTGATTTCCATAACTCAGCTGTCAGAACTGAT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TCTATATCCGTTTATCACTTCTTCAAAACGTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	AATTGCTTTAATGTTTGCTTTGGGTGCTTTTTGT
GTCTCACCCTTCACGGGTGAGTGGATTGAAAT	TAAGTTTGAATTAGACGCGATTATGGAGGGGCTT
GTCTCACCCTTCATGGGTGAGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594036.1\|WP_138080865.1\|387357_387651_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
NZ_LR594036.1\|WP_003082727.1\|399772_400246_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_LR594036.1\|WP_138080877.1\|395364_395574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594036.1\|WP_138080867.1\|388842_390513_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LR594036.1\|WP_138080857.1\|382900_384796_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NZ_LR594036.1\|WP_138080869.1\|390500_391268_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227095
NZ_LR594036.1\|WP_138080849.1\|371992_372553_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|223637
NZ_LR594036.1\|WP_138080881.1\|396819_397740_+\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_LR594036.1\|WP_138080853.1\|375880_376099_+\|ComC/BlpC-family-peptide-pheromone/bacteriocin	unknown	unknown	unknown
NZ_LR594036.1\|WP_138080875.1\|393467_395132_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_LR594036.1\|WP_138080884.1\|397751_398828_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_LR594036.1\|WP_138080871.1\|391343_392378_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270264
NZ_LR594036.1\|WP_138080879.1\|395783_396743_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_LR594036.1\|WP_138080861.1\|385650_386325_+\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
NZ_LR594036.1\|WP_138080863.1\|386321_387347_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_LR594036.1\|WP_138080855.1\|382172_382901_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_LR594036.1\|WP_138080847.1\|371411_371996_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_LR594036.1\|WP_138080873.1\|392387_393467_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_LR594036.1\|WP_138080859.1\|384800_385649_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_LR594036.1\|WP_138080851.1\|372627_375279_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582

Protein	Function_ID	Function_description	E-value
NZ_LR594036.1\|WP_138080865.1\|387357_387651_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.0667e-34
NZ_LR594036.1\|WP_003082727.1\|399772_400246_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	1.14712e-62
NZ_LR594036.1\|WP_138080881.1\|396819_397740_+\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.49936e-71
NZ_LR594036.1\|WP_138080867.1\|388842_390513_+\|histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.54894e-32
NZ_LR594036.1\|WP_138080857.1\|382900_384796_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NZ_LR594036.1\|WP_138080873.1\|392387_393467_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.36581e-150
NZ_LR594036.1\|WP_138080849.1\|371992_372553_+\|shikimate-kinase	gnl\|CDD\|223637	COG0563, Adk, Adenylate kinase and related kinases [Nucleotide transport and metabolism].	0.000825563
NZ_LR594036.1\|WP_138080859.1\|384800_385649_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.14737e-159
NZ_LR594036.1\|WP_138080875.1\|393467_395132_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	5.08224e-110
NZ_LR594036.1\|WP_138080884.1\|397751_398828_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	7.79652e-20
NZ_LR594036.1\|WP_138080871.1\|391343_392378_+\|extracellular-solute-binding-protein	gnl\|CDD\|270264	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily. The substrate domain of this group shows a high homology to the periplasmic component of ferric iron transporter (Fbp), but its biochemical characterization has not been performed. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.94219e-106
NZ_LR594036.1\|WP_138080879.1\|395783_396743_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.08871e-55
NZ_LR594036.1\|WP_138080861.1\|385650_386325_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	2.97941e-42
NZ_LR594036.1\|WP_138080863.1\|386321_387347_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_LR594036.1\|WP_138080855.1\|382172_382901_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.71156e-110
NZ_LR594036.1\|WP_138080847.1\|371411_371996_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.53482e-36
NZ_LR594036.1\|WP_138080869.1\|390500_391268_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.26574e-45
NZ_LR594036.1\|WP_138080851.1\|372627_375279_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0

>NZ_LR594036.1|WP_138080865.1|387357_387651_+|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETSAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEETDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>NZ_LR594036.1|WP_138080863.1|386321_387347_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQGGKVLKRIPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNMLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTTLFNAVNDELIWALEMVQAANNKDTLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKFMLLPYVQAQLLAKAIRGDLESYPPFMV
>NZ_LR594036.1|WP_138080861.1|385650_386325_+|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDLLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLGCHINEGCLYYHSVNQRVIVPMTSDLRQEVRELAEEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVARYINEAMTSEEMNP
>NZ_LR594036.1|WP_138080859.1|384800_385649_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLESRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVREVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>NZ_LR594036.1|WP_138080857.1|382900_384796_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRDNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSNPAPHPLVDKFAYYSAEVDQSQYDSFHKQLNNWIDYCEEGEVKRFLTIVQQFILKPEFLILILDSLIGPDYQNNQLKISFCDVTGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEEDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLDKWQEKYSWESRFKFGKSRLRTPTFHDILNVSYGVDRERFLELDNDNFKSDQVQKLVTSLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGTDSDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWKKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>NZ_LR594036.1|WP_138080855.1|382172_382901_+|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYPIPTRQALNGIVDAIYYKPTFTNIVTEVKIINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRESVGLVDDISQEEYEAAVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKPQSECDIVNTLSSYAFKAPEEIKSVNDEYMEYDDMEKGEN
>NZ_LR594036.1|WP_138080853.1|375880_376099_+|ComC/BlpC-family-peptide-pheromone/bacteriocin
MNKKAIEHFDVIDDRTLENILGGGFGWGAALAGLFGGLAASPTLEDLNGKKLPKPSSCSLYGIGGTPNACNF
>NZ_LR594036.1|WP_138080851.1|372627_375279_+|valine--tRNA-ligase
MSKELSPKYNPTEVEAGRYDKWLEEDVFKPSGDKTAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGITRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMTYMLEDGSRGLQVATTRPETMFGDVAVAVNPEDPRYKDLIGQNVVLPIVNKLIPIVADEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNVMNDDGTMNELAGEFAGMDRFEARKATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQGTENRVDFYPPRFNDTFMSWMENVHDWVISRQLWWGHQIPAWYNAEGDIYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVVEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVATSEVGNVTDQWILHNLNETIVKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEDEKVMTRSVLLYTLDKILRLLHPIMPFVTEEIYVQYAQGSIVTAAYPVANDAFENAVAHRGVESLKDLIRAVRNARAEVNVAPSKAITILIKTSDKELEDFFKANENYIRRFTNPEKLEISADLQAPDMAMTSIITGAEIYLPLADLLNVDEELARLDKELAKWQKELDMVGKKLSNERFVANAKPEVVEKEREKQADYQAKFDATKERIAEMKKLVR
>NZ_LR594036.1|WP_138080849.1|371992_372553_+|shikimate-kinase
MNLVLIGAQASGKMTIGQEVAKLTELTLFHNHETIDFVLKFMPWSTDATDLITKIHLDFFETFAKIGRPMIFTIVIDFGDSTEVAFLETLQNIFEAENQEVLFVELETSLEERLVRNKTENRLRHKPFKRDIAWSENDILSTMDYVTFNSKEAPEKLHYYYKINNTHKSAQEVAAEIVEVMKKIEY
>NZ_LR594036.1|WP_138080847.1|371411_371996_+|GNAT-family-N-acetyltransferase
MIKILGELENNQLPAIETERLILRGRRLSDAEDIFAFAKLAEVSCPAGFPPVATIEDEIHYLDTIYPENLKKEKLPSGYGITLKGQDKVIGSVDFNHRHEDDVFEIGYLLHPDYWGQGIVPEAAKALLEYGFTKLHLHKIELACYSYNKQSQVVADKLGFTLEARIRDRKDAQNHRCDDLRYGLLKSEWEAKYL
>NZ_LR594036.1|WP_138080867.1|388842_390513_+|histidine-kinase
MGIDKKVAELTFKEKLRLEILAGFKKTALVIGLSYVIVLSLFIVSVQYSQLVGGTNVIISYFRTTHSKSDSLFAKLEQKGLSQFLSGHLSEREMFRKVYQESNHLPFRSAISIYNPKGQLLLSTRLPNRGGLRDDAFVKIALPHVKNRSEYRLMKDYQGNPFLLKMKAIWSKGVKIGYLVLYIDGNDFESGLKVDATQYVIADHFNHLFTSNSLQDTTLSWQKIDSNQFKKRMSISDGNLILHQWKPLGQELFLYTSILVLPLSYLLLFTCFFVFVIMLLLIVLARRLSERISSHSSDSVALLVKDLDLIVGGYQYKVGVRSKDEFGYLAEKINSLIDTLDRLFRQMLTLEQEKSTVERKLLEAQFHPHFLYNSLESIKVLIHFNPHKAQAMILALNRVLRYSITSQAEYAVLASDFDILEDFLEVNQVRFEDFRFSLFYPDDLQRLRIPKLFLLPLVENAIKYGMKSRHDLTIRIELKMTDKHIQFYVLDNGPGFSQFFKDNFARYLKAGHTEHGLVNSYSRLVMLYPSTTIELCQVDMLNGVLLQFERKQACYE
>NZ_LR594036.1|WP_138080869.1|390500_391268_+|helix-turn-helix-domain-containing-protein
MLRMIIVEDEHLIRKWLSQVIDYKQMGIDLLACARDGQEGIEAIIRFEPDIVLTDIMMPRKTAFDMFEATRKYNYQKIILSSFSDFQNAKRAMQYGVINFLEKPLDTDELRDCLWQICLDLKSEDILLVNEEELIKQFPTIALPASDDNSLSAQVISYLHHHYNQTISTEAIAHQFGYSESYLYKKVKDELGITLKDYLNRYRVRRAIQCILEDPSLMVYQVSSSVGFSDYNYFGKVFRRYTGLTFTEFKENFTH
>NZ_LR594036.1|WP_138080871.1|391343_392378_+|extracellular-solute-binding-protein
MRKKSLTVLMALVALLGLSACGSKAENKKEAKGSDKLVVYSPNSEGLINATVPAFEEKYGVKVELIQAGTGELFKKVESEANKPVADVVFGGSYTQYAQHPELFEKYTAKDNDKVIKDYQNTTGYSTPYTLDGSVLIVNPDLTKGMKIKGYKDLLNPELKGKIATADPANSSSAFAQLTNMLKATGGYDKNTSWNYVKDLFTLVDGKINSSSSNVYKSVADGEMAVGLSYEDPSVKLLNDGANVKVIYPEEGSVFLPASAAIIKNAPNKSNAKKFIDFIVSKDAQDALGTETTNRPVRNDAKVSKNMKSLKDIKTINEDYDYVIKHKAEIVKRYNDIFVDIQSK
>NZ_LR594036.1|WP_138080873.1|392387_393467_+|ABC-transporter-ATP-binding-protein
MSQITIKNAKKIYHDTPVIENLNVVIPDGSLFTLLGPSGCGKTTLLRMIAGFNSIEGGDFYFGEERINQKEPSRRNIGMVFQNYAIFPHLSVKDNVAFGLKQRQLSKTEIECRVDKYLKLMQIDQFKDRKPENLSGGQQQRVALARALAISPDVLLMDEPLSNLDAKLRIDMRQAIKEIQKEVGITTVYVTHDQEEAMAISDYIAVMYLGEIQQIGKPKELYHRPSNEFVATFIGRTNMLDADLIHQDTQAYLQFKDGYTISFPSLNHLQDQAVRVSVRPEEFIRQSDGPIEAVIKDSTYLGLNTEYIVEPPFASRLQVIEESTLEEDFGPGDTIRLAINAQKINVFSADGKVNLLGVK
>NZ_LR594036.1|WP_138080875.1|393467_395132_+|iron-ABC-transporter-permease
MIKHLQKMNIWIISSIIIFISYLLFLIYPIVTILKQALFVDGHLSIQNFMTFFAKDYYFETLLNSFKVSIMATLLSLIVGTLLAYCFAMFRFKGKKYLQILVIIASMSAPFVGAYSWILLLGRNGVITKWLQMTFGIPKIDIYGFSGIVLVFTLQLFPLVFLYVSGALKSMDNSLLEAAESMGVKGRKRLTKIVLPLLVPTLLAAALLVFMRAFSDFGTPMLIGEGYRTFPVLVYSQFISEVGGNSAFASALAIIAITIALLIFLVQKYLSQKHSFSMSSLHPIEAKPLNGWQKIVVYLWVYGIIGLSVLPQSYLIYTSFLKTSGMIFVPGYSLNSYVQAFNRMGTSILNTLRIPLMALCLVLIFATFISYLSVRKRNAFTSLIDSMSMVPYIVPGTVMGIAFITAFNTGIGGSGFLAIIGTSLVMVISLAVRRLPYTIRSSVASLHQISPSIEEAASSLGSSRLNTFVKITIPMMLSGIVSGAILSWITMISELSTSILLYNINTKTMTVAIYTEVLRGNYGIAAALSTILTTVTVLSLLLFMKVSKSDSITM
>NZ_LR594036.1|WP_138080877.1|395364_395574_+|hypothetical-protein
MSELTSICLSDDLNQQLNFWISAYHINKAEFINQIISEKLDSLYAIQEANLAMRDWIKEHQNSYFSPIK
>NZ_LR594036.1|WP_138080879.1|395783_396743_+|Gfo/Idh/MocA-family-oxidoreductase
MAIVRYGVVSTAQVAPRFIEGVRLAGNGEIGAVSSRSLEKARTFAAQYHIPKAYGSLSGMLADPDIDIIYVPTINKDHYNCAKKALQAGKHVLVEKPFTLTYAEARELFNLAYRKKLFLMEAQKSVFIPLTDIIKKTIQSGELGEILSVSSTTAYPNIDHITWFTDLEAGGGTAHFMAPYAFSYLQYLFDCPIEKAGGIANFPEGMSDSQSKILLQMGNGVLVDIFLTTKLKLKHKMTIRGTKGTLEIPSFWKSTMATLTYEDGSRRLLEAPMDSDFASEAYHVSQMVQEGATTSPIMKPQITLLTIKIIEELYKSWGK
>NZ_LR594036.1|WP_138080881.1|396819_397740_+|magnesium-transporter-CorA-family-protein
MSGEIKTQELLRVINVDHLSPDDKRLLMTLGNLGHDVLDYAQDSNETAFVKEQDGWLVAVYQLLEDKIVSLKDGNVPRILPMTFLISNQTLLIFETDETAQLLAKVIDRVNQRQEPKKIMLQLLTLFTKSYFTEVEVMGKERDYLMNQLRQRPTKKNLTELANLQSSSVYVVMGTQQNGEMLADFQELPSYNSFSDQVKAELRDTVIEVKQLSNMCSLHTRILEQLASSYNNVLSNRLNDNVTSLTIFTIGLTVITTVTSFYGMNVKLPFAKVDIVWLLILIITTIIALILMRFLRRFVNDGHRHL
>NZ_LR594036.1|WP_138080884.1|397751_398828_+|MmcQ/YjbR-family-DNA-binding-protein
MTIEENVFRKRQIQLDRLVPFGFVSQQDGSFVYLADILDGAFTVQVIVNAEGQLSSRVIDNDMEEDYLAIYLEKMVPSYVRQVQAAYQGILEEISEACCLYLPFHSKQMNRLNQRLMDTFCDPLDQPFDSHSDTYSYRVGGKWYALIFSLPLKKLEGIAEGYKNKTAEVLNLKVSLYELGVLLSQEGIYPAYHMSKKSWISIILDDSLPDQTIWELILTSRALVEPTLLKNSKEPDFWVIPANLNYYDIDNEFAVSTDILWTQKASIKVGDYVFIYITAPTKAIRYACRVLEANIPNEGFRSRKDIKNLMRLQLLESFTDDQLPLTLLQEYNVKSVRGPRRLTSKFIAFLQEKGYLKG
>NZ_LR594036.1|WP_003082727.1|399772_400246_-|arginine-repressor
MNKKEIRHQLIRSLISETTIHTQQELQSRLEKNGIHITQATLSRDMKELNLVKVSNGESTHYETLSISQSRWEHRLRFYMEDALVMLKIVQNQIVLKTLPGLAQSFGSILDAMQISEIVATVCGDDTCLIICEDNDGAKACFETLSNYTPPFFFSNK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR594036_1	1.2\|387898\|34\|NZ_LR594036\|PILER-CR,CRISPRCasFinder,CRT	387898-387931	34	MK448755	Streptococcus phage Javan423, complete genome	11904-11937	0	1.0
NZ_LR594036_1	1.2\|387898\|34\|NZ_LR594036\|PILER-CR,CRISPRCasFinder,CRT	387898-387931	34	MK448756	Streptococcus phage Javan425, complete genome	11904-11937	0	1.0
NZ_LR594036_1	1.1\|387833\|33\|NZ_LR594036\|PILER-CR,CRISPRCasFinder,CRT	387833-387865	33	MK448998	Streptococcus phage Javan636, complete genome	36896-36928	2	0.939

1. spacer 1.2|387898|34|NZ_LR594036|PILER-CR,CRISPRCasFinder,CRT matches to MK448755 (Streptococcus phage Javan423, complete genome) position: , mismatch: 0, identity: 1.0

taattcagcatgaccgtcatcttcaaaaataaaa	CRISPR spacer
taattcagcatgaccgtcatcttcaaaaataaaa	Protospacer
**********************************

2. spacer 1.2|387898|34|NZ_LR594036|PILER-CR,CRISPRCasFinder,CRT matches to MK448756 (Streptococcus phage Javan425, complete genome) position: , mismatch: 0, identity: 1.0

taattcagcatgaccgtcatcttcaaaaataaaa	CRISPR spacer
taattcagcatgaccgtcatcttcaaaaataaaa	Protospacer
**********************************

3. spacer 1.1|387833|33|NZ_LR594036|PILER-CR,CRISPRCasFinder,CRT matches to MK448998 (Streptococcus phage Javan636, complete genome) position: , mismatch: 2, identity: 0.939

atatcgataacggggtatttactaaaacacttc	CRISPR spacer
atattgataacggggtatttactaagacacttc	Protospacer
****.********************.*******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

172288 : 227144

Bacillus_phage(37.5%)

protease,transposase,bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138080554.1\|172288_173209_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_138080556.1\|173365_174244_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.3e-19	30.8
WP_138080557.1\|174240_174975_+	ABC transporter permease	NA	NA	NA	NA
WP_138080559.1\|174971_176057_+	sensor histidine kinase	NA	NA	NA	NA
WP_138080561.1\|176060_176657_+	response regulator transcription factor	NA	NA	NA	NA
WP_138080563.1\|176703_177465_-	ABC transporter permease	NA	NA	NA	NA
WP_138080565.1\|177461_178364_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.5e-32	36.3
WP_138080567.1\|178360_178567_-	PLDc N-terminal domain-containing protein	NA	NA	NA	NA
WP_138080569.1\|178556_179636_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_138080571.1\|179803_180268_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_138080574.1\|180539_181715_+\|transposase	IS110 family transposase	A0A1X9I5Z0	Streptococcus_phage	1.4e-19	25.5
WP_172601627.1\|181793_182375_-	isochorismatase family protein	NA	NA	NA	NA
WP_138080576.1\|182486_183785_-	hypothetical protein	NA	NA	NA	NA
WP_138080578.1\|184331_184940_-	chromosome assembly protein	NA	NA	NA	NA
WP_138080580.1\|185027_186410_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.5e-17	26.3
WP_138080582.1\|186406_187096_-	response regulator transcription factor	W8CYM9	Bacillus_phage	7.9e-31	36.7
WP_138080584.1\|187324_188020_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_138080586.1\|188578_190171_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_138080588.1\|191589_192303_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_138080590.1\|192490_193447_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_138080592.1\|193545_195030_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA
WP_138083476.1\|195597_196167_+	signal peptidase I	NA	NA	NA	NA
WP_138080594.1\|196187_200501_+	InlB B-repeat-containing protein	NA	NA	NA	NA
WP_138080596.1\|200539_202048_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_138080598.1\|202088_202958_+	class C sortase	NA	NA	NA	NA
WP_138080600.1\|203219_203696_+	ferrous iron transport protein A	NA	NA	NA	NA
WP_138080602.1\|203692_205855_+	ferrous iron transport protein B	NA	NA	NA	NA
WP_138080604.1\|205858_205990_+	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_138080606.1\|206166_207744_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_138080608.1\|207983_209306_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.9e-104	45.1
WP_138080610.1\|209609_210065_+	hypothetical protein	NA	NA	NA	NA
WP_138080611.1\|210316_211003_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.2e-32	37.8
WP_138080613.1\|211004_212033_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	7.7e-14	28.9
WP_138080615.1\|212279_213539_+	peptidoglycan bridge formation glycyltransferase FemA/FemB family protein	NA	NA	NA	NA
WP_172601628.1\|213857_214163_-\|protease	Spi family protease inhibitor	NA	NA	NA	NA
WP_138080617.1\|214164_215358_-	C10 family peptidase	NA	NA	NA	NA
WP_138080619.1\|216147_216996_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_138080621.1\|217369_218290_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138080623.1\|218303_220886_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_138080625.1\|221846_222605_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_138080627.1\|223390_226498_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_138080629.1\|226979_227144_+\|bacteriocin	streptolysin S family bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_2

1219137 : 1293438

Streptococcus_phage(72.73%)

integrase,capsid,tail,holin,terminase,tRNA,portal

attL 1219726:1219742|attR 1299584:1299600

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138082176.1\|1219137_1221543_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
1219726:1219742	attL	NA	NA	NA	NA
WP_138082178.1\|1221557_1222082_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_145964662.1\|1222127_1223171_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	3.5e-30	34.3
WP_138082182.1\|1223463_1224345_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_172601601.1\|1224375_1224567_-	DNA-directed RNA polymerase subunit beta	NA	NA	NA	NA
WP_138082184.1\|1224566_1225838_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_172601634.1\|1225912_1226137_-	DUF1146 domain-containing protein	NA	NA	NA	NA
WP_003084986.1\|1226217_1226634_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_138082186.1\|1226646_1228053_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_003084154.1\|1228170_1229049_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_138082188.1\|1229064_1230570_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_138082190.1\|1230585_1231122_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_138082192.1\|1231121_1231616_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_138082194.1\|1231631_1232345_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_003085112.1\|1232454_1232652_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_138082196.1\|1232941_1234381_-	glycogen synthase GlgA	NA	NA	NA	NA
WP_138082198.1\|1234377_1235511_-	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA
WP_138082200.1\|1235500_1236640_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_138082202.1\|1236694_1238569_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_138082204.1\|1238644_1240945_-	type I pullulanase	NA	NA	NA	NA
WP_138082206.1\|1240944_1241976_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	8.0e-19	26.7
WP_138082208.1\|1241990_1243949_-	NAD-dependent DNA ligase LigA	A0A1W6DX16	Sphingobium_phage	2.9e-94	34.9
WP_138082210.1\|1244055_1244565_-	QueT transporter family protein	NA	NA	NA	NA
WP_003082749.1\|1245181_1246489_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	7.1e-238	95.9
WP_138082212.1\|1246717_1247164_+	YueI family protein	NA	NA	NA	NA
WP_138082214.1\|1247760_1248420_-	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_138082216.1\|1248522_1250247_-	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_138082218.1\|1250399_1252352_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.2e-142	45.7
WP_138082220.1\|1252352_1252913_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_138082222.1\|1253014_1254232_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_138082224.1\|1254766_1255039_-	hypothetical protein	NA	NA	NA	NA
WP_138082226.1\|1255222_1256428_-	glucosaminidase domain-containing protein	A7J2B5	Streptococcus_phage	3.3e-189	77.2
WP_138082228.1\|1256429_1256762_-\|holin	phage holin	A3F664	Streptococcus_phage	5.5e-38	72.7
WP_138082230.1\|1256766_1257036_-	hypothetical protein	A7J2B2	Streptococcus_phage	1.0e-18	56.8
WP_172601602.1\|1257046_1257187_-	hypothetical protein	A0A1X9I5T1	Streptococcus_phage	2.6e-10	65.1
WP_138082232.1\|1257249_1257648_-	DUF1366 domain-containing protein	NA	NA	NA	NA
WP_172601603.1\|1257649_1257805_-	hypothetical protein	NA	NA	NA	NA
WP_138083508.1\|1257814_1259071_-	hypothetical protein	E4ZFN3	Streptococcus_phage	2.3e-28	30.9
WP_138082234.1\|1261788_1263231_-\|tail	phage tail family protein	M1I9T9	Streptococcus_phage	8.8e-64	32.9
WP_138082236.1\|1263227_1266584_-	tape measure protein	A0A286QN99	Streptococcus_phage	3.5e-07	35.6
WP_138082238.1\|1266599_1267199_-	hypothetical protein	A0A1S5SAD5	Streptococcus_phage	6.2e-48	52.3
WP_138082240.1\|1267200_1267569_-	hypothetical protein	A0A286QNZ4	Streptococcus_phage	2.5e-23	48.8
WP_138082242.1\|1267632_1268097_-\|tail	phage tail protein	A0A1P8VVM4	Streptococcus_phage	5.2e-34	48.7
WP_138082244.1\|1268097_1268496_-\|capsid	capsid protein	B3GW09	Streptococcus_phage	2.0e-42	61.6
WP_138082246.1\|1268492_1268855_-\|capsid	capsid protein	A0A286QMS1	Streptococcus_phage	6.4e-40	68.1
WP_138083509.1\|1269182_1269575_-	hypothetical protein	A0A2H4JHX8	uncultured_Caudovirales_phage	2.2e-30	55.0
WP_138082248.1\|1269607_1269787_-	hypothetical protein	NA	NA	NA	NA
WP_172601604.1\|1269792_1269939_-	hypothetical protein	NA	NA	NA	NA
WP_138082250.1\|1269956_1270781_-\|capsid	N4-gp56 family major capsid protein	A0A2H4JBI0	uncultured_Caudovirales_phage	6.2e-123	78.8
WP_138082252.1\|1270801_1271380_-	phage scaffolding protein	A0A2H4JBH4	uncultured_Caudovirales_phage	8.7e-39	51.3
WP_138082254.1\|1271547_1271820_-	hypothetical protein	NA	NA	NA	NA
WP_138082256.1\|1271870_1272110_-	16S rRNA processing protein RimM	A0A1S5S916	Streptococcus_phage	1.0e-14	52.1
WP_138082258.1\|1273666_1275127_-\|portal	phage portal protein	A0A286QNN2	Streptococcus_phage	6.5e-208	72.8
WP_138082260.1\|1275189_1276488_-\|terminase	PBSX family phage terminase large subunit	A0A286QNX6	Streptococcus_phage	3.2e-158	63.3
WP_138082262.1\|1276456_1277188_-\|terminase	terminase	A0A2H4J4R0	uncultured_Caudovirales_phage	2.7e-29	34.2
WP_138082264.1\|1277348_1277765_-	DUF1492 domain-containing protein	A0A141E1Y4	Streptococcus_phage	1.5e-56	82.6
WP_138082266.1\|1277839_1278088_-	hypothetical protein	M1PF60	Streptococcus_phage	2.3e-17	54.3
WP_138082268.1\|1278099_1278534_-	hypothetical protein	U6E9D1	Streptococcus_phage	4.1e-57	76.9
WP_138082270.1\|1278535_1278838_-	DUF1372 family protein	M1PL25	Streptococcus_phage	8.0e-44	84.7
WP_138082273.1\|1278825_1279257_-	RusA family crossover junction endodeoxyribonuclease	A0A141E1Z1	Streptococcus_phage	2.4e-70	91.4
WP_138082275.1\|1279256_1279598_-	hypothetical protein	M1PKX3	Streptococcus_phage	4.8e-13	37.5
WP_138082277.1\|1279610_1279820_-	hypothetical protein	A0A1S5SFI1	Streptococcus_phage	7.2e-20	62.3
WP_138082280.1\|1279988_1280960_-	DUF1351 domain-containing protein	A0A2H4J618	uncultured_Caudovirales_phage	4.1e-81	57.3
WP_138082283.1\|1280972_1281794_-	phage recombination protein Bet	A0A1S5SD57	Streptococcus_phage	1.5e-89	64.7
WP_172601605.1\|1281799_1281967_-	hypothetical protein	NA	NA	NA	NA
WP_138082285.1\|1282380_1282611_-	hypothetical protein	Q938N1	Temperate_phage	5.7e-18	62.0
WP_138082287.1\|1282588_1282981_-	DnaD domain protein	Q938N2	Temperate_phage	2.7e-36	61.9
WP_138082289.1\|1283113_1283374_-	transcriptional regulator	A0A060QMU7	Streptococcus_phage	1.8e-15	47.1
WP_138082291.1\|1283555_1284017_+	hypothetical protein	NA	NA	NA	NA
WP_138082293.1\|1284266_1284497_-	hypothetical protein	NA	NA	NA	NA
WP_138082295.1\|1284573_1284759_-	helix-turn-helix transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	2.0e-05	47.5
WP_138082297.1\|1284897_1285119_+	hypothetical protein	NA	NA	NA	NA
WP_172601571.1\|1285299_1285458_+	hypothetical protein	NA	NA	NA	NA
WP_138083510.1\|1285498_1285705_-	hypothetical protein	NA	NA	NA	NA
WP_138082299.1\|1285691_1286462_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	1.0e-74	57.6
WP_138082301.1\|1286474_1286690_-	transcriptional regulator	M1Q1B4	Streptococcus_phage	1.4e-23	78.3
WP_138083511.1\|1286736_1287117_+	DUF2513 domain-containing protein	A0A1S5SCT1	Streptococcus_phage	3.7e-38	62.7
WP_172601606.1\|1287099_1287237_-	hypothetical protein	NA	NA	NA	NA
WP_138082303.1\|1287560_1287911_+	helix-turn-helix transcriptional regulator	A0A1S5SFC6	Streptococcus_phage	1.8e-39	69.5
WP_138082305.1\|1288794_1289181_+	ImmA/IrrE family metallo-endopeptidase	Q7Y4M1	Streptococcus_phage	7.3e-42	63.2
WP_138082307.1\|1289196_1289427_+	hypothetical protein	NA	NA	NA	NA
WP_138082309.1\|1289549_1290629_+\|integrase	site-specific integrase	A0A141DZH6	Streptococcus_phage	2.0e-65	40.8
WP_138082311.1\|1290803_1291484_-	hydrolase	NA	NA	NA	NA
WP_003084324.1\|1291738_1292086_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_138082313.1\|1292220_1293438_-	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.3e-87	49.2
1299584:1299600	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1502202 : 1516161

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138082643.1\|1502202_1503030_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	6.7e-125	77.7
WP_138082645.1\|1503031_1503694_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_138082647.1\|1503770_1503995_+	hypothetical protein	NA	NA	NA	NA
WP_138082649.1\|1504222_1504606_+	VOC family protein	NA	NA	NA	NA
WP_138082651.1\|1504615_1505032_+	VOC family protein	NA	NA	NA	NA
WP_138082653.1\|1505118_1505472_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.1e-36	65.5
WP_138083515.1\|1505484_1505964_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.4e-42	52.9
WP_138083516.1\|1506032_1507211_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.2e-165	74.4
WP_138082655.1\|1507265_1507817_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	3.5e-45	51.9
WP_138082657.1\|1507840_1508935_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.8e-154	71.1
WP_138082659.1\|1509059_1509692_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_138082661.1\|1510369_1511239_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.4e-111	71.3
WP_003083224.1\|1511240_1511570_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.1e-29	61.3
WP_138082663.1\|1511559_1512360_-	signal peptidase II	NA	NA	NA	NA
WP_138082665.1\|1512356_1513232_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.1e-66	46.6
WP_138082667.1\|1513253_1513883_-	dTMP kinase	M1PSC7	Streptococcus_phage	3.0e-69	62.5
WP_138082669.1\|1513964_1514627_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.3e-59	56.0
WP_138082671.1\|1514686_1515397_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-15	27.9
WP_138082673.1\|1515396_1516161_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-16	26.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage