CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR594046	Streptococcus dysgalactiae strain NCTC6403 chromosome 1	2 crisprs	DEDDh,RT,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas3	0	6	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594046_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594046_1

1267137-1267700

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	PILER-CR

8 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LR594046_1

>merge|NZ_LR594046|1|1267137-1267700|CRISPRCasFinder,CRT,PILER-CR
GAACTGGGACCATTCAAAACAGCATAGCTCTAAAACTCTTTATACAGTTCAGAAAACGATATCAAGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACGCTTCTGGATTAACCCCTACTGCATCATAAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTATAGCGACACACCATCTGAACAGCAGTCAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACCAGCTGTTTTGACACTGCTAATACTATTTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTCCTTATTATAAAAATAGCGCACAGCAAACGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACCTTTAAATGTGATAACATCACCAACTTTATGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTGCGGACCTTCGTAGTAAGGCAAGTCGTTAGTTTTGGGAGCATTCAAAACAACATAGCTCTAAAACCTATTCATGGAATAGCCAACATGGAAGCTGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594046|1|1|1267137-1267700|CRISPRCasFinder
GAACTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCTTTATACAGTTCAGAAAACGATATCAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GCTTCTGGATTAACCCCTACTGCATCATAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TATAGCGACACACCATCTGAACAGCAGTCA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTGTTTTGACACTGCTAATACTATTTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTTATTATAAAAATAGCGCACAGCAAAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CTTTAAATGTGATAACATCACCAACTTTAT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TGCGGACCTTCGTAGTAAGGCAAGTCGTTA
GTTTTGGGAGCATTCAAAACAACATAGCTCTAAAAC	CTATTCATGGAATAGCCAACATGGAAGCTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594046|1|1|1267137-1267700|CRT
GAACTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCTTTATACAGTTCAGAAAACGATATCAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GCTTCTGGATTAACCCCTACTGCATCATAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TATAGCGACACACCATCTGAACAGCAGTCA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTGTTTTGACACTGCTAATACTATTTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTTATTATAAAAATAGCGCACAGCAAAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CTTTAAATGTGATAACATCACCAACTTTAT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TGCGGACCTTCGTAGTAAGGCAAGTCGTTA
GTTTTGGGAGCATTCAAAACAACATAGCTCTAAAAC	CTATTCATGGAATAGCCAACATGGAAGCTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594046|1|1|1267203-1267700|PILER-CR
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GCTTCTGGATTAACCCCTACTGCATCATAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TATAGCGACACACCATCTGAACAGCAGTCA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTGTTTTGACACTGCTAATACTATTTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTTATTATAAAAATAGCGCACAGCAAAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CTTTAAATGTGATAACATCACCAACTTTAT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TGCGGACCTTCGTAGTAAGGCAAGTCGTTA
GTTTTGGGAGCATTCAAAACAACATAGCTCTAAAAC	CTATTCATGGAATAGCCAACATGGAAGCTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594046.1\|WP_138125788.1\|1263384_1264035_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_LR594046.1\|WP_003051133.1\|1258404_1259214_-\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
NZ_LR594046.1\|WP_003058453.1\|1259740_1260166_-\|PTS-mannose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NZ_LR594046.1\|WP_138125790.1\|1264047_1264485_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_LR594046.1\|WP_111716697.1\|1275647_1276400_-\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NZ_LR594046.1\|WP_138125806.1\|1277605_1278247_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594046.1\|WP_111716684.1\|1266561_1267020_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_LR594046.1\|WP_138125802.1\|1274883_1275648_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_LR594046.1\|WP_138125804.1\|1276413_1277544_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_LR594046.1\|WP_138125800.1\|1274254_1274884_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_LR594046.1\|WP_003051135.1\|1259229_1259721_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NZ_LR594046.1\|WP_138125786.1\|1261502_1262672_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_LR594046.1\|WP_003051128.1\|1257580_1258408_-\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	unknown	unknown	gnl\|CDD\|226239
NZ_LR594046.1\|WP_138125784.1\|1260372_1261392_-\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_LR594046.1\|WP_111716682.1\|1264659_1266492_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_LR594046.1\|WP_138125792.1\|1267802_1268465_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LR594046.1\|WP_138125796.1\|1268792_1269662_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_LR594046.1\|WP_138125798.1\|1269661_1273777_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LR594046.1\|WP_138125794.1\|1268454_1268796_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LR594046.1\|WP_138125808.1\|1278370_1279726_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670

Protein	Function_ID	Function_description	E-value
NZ_LR594046.1\|WP_138125788.1\|1263384_1264035_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	6.83708e-34
NZ_LR594046.1\|WP_003051133.1\|1258404_1259214_-\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	7.13101e-76
NZ_LR594046.1\|WP_003058453.1\|1259740_1260166_-\|PTS-mannose-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	4.42496e-29
NZ_LR594046.1\|WP_138125790.1\|1264047_1264485_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	4.95267e-85
NZ_LR594046.1\|WP_111716697.1\|1275647_1276400_-\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	9.24897e-99
NZ_LR594046.1\|WP_111716684.1\|1266561_1267020_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.1429e-75
NZ_LR594046.1\|WP_138125802.1\|1274883_1275648_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.60477e-127
NZ_LR594046.1\|WP_138125804.1\|1276413_1277544_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_LR594046.1\|WP_138125800.1\|1274254_1274884_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	7.01212e-76
NZ_LR594046.1\|WP_003051135.1\|1259229_1259721_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	1.55198e-54
NZ_LR594046.1\|WP_138125786.1\|1261502_1262672_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	2.76385e-77
NZ_LR594046.1\|WP_003051128.1\|1257580_1258408_-\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.96187e-107
NZ_LR594046.1\|WP_138125784.1\|1260372_1261392_-\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.71454e-102
NZ_LR594046.1\|WP_111716682.1\|1264659_1266492_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_LR594046.1\|WP_138125792.1\|1267802_1268465_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.64214e-123
NZ_LR594046.1\|WP_138125796.1\|1268792_1269662_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.65758e-130
NZ_LR594046.1\|WP_138125798.1\|1269661_1273777_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LR594046.1\|WP_138125794.1\|1268454_1268796_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.56277e-56
NZ_LR594046.1\|WP_138125808.1\|1278370_1279726_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0

>NZ_LR594046.1|WP_111716684.1|1266561_1267020_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGLVGEVLRRIERRGFTFDRLELRQASPELLAKHYEALVTKPFYPELEAYMTSGPVLIGVLSGNRVISSWRTMMGVTNPKDALPGTIRGDFAQAPGDDGGIFNVVHGSDSRDSARREIALWFNQAELDSSAIFPKDNQ
>NZ_LR594046.1|WP_111716682.1|1264659_1266492_-|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDGDMIEVSNPSEFPDPTRVASIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDDDAKK
>NZ_LR594046.1|WP_138125790.1|1264047_1264485_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
METKDDLKKRIGDLSYEVTQHAATERPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENHMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPQEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDEK
>NZ_LR594046.1|WP_138125788.1|1263384_1264035_-|HD-domain-containing-protein
MTEKEAQLLAQAEAWVKEKLAADASGHDFWHVIRVCRLAKIIAQEEEGDVFICQLAALLHDMADDKLNADPKKARQDILAWLAGHDVSQKQSDQVMTIIDTISFKGGHGKPLTNLEAKIVQDADRLDAIGAIGIARCMAYSGHTGRLIHDPDRLPRETMTVEEYRKDGTAIMHFYEKLLTLKERMNTAYGRQLAEHRHQVLVSYLDEFYAEWDGLR
>NZ_LR594046.1|WP_138125786.1|1261502_1262672_-|DUF2974-domain-containing-protein
MATLLDYIKTNGHRDYHSLALNELDVAVINEIGYLAFDELVADDNHLEATIKLSQLPLLQTREIKGAPYDFLNTKERLDLFQMTCQSKRFSELTLSHYINDINTEFEKQFAAMVFRLPSIDYTQLVFRGTDDSLIGWKEDFKLTYMREIPAHRSAIDYLKTYHTYYPNQKLVLSGHSKGGNLALYAASFVPKNVQASLKDIYLFDSPGLIKEFLTHPGYQAIRRRLVVIKPQDAIIGVMLYCDVPEKIVQSQSYGLLQHQMVNWQITPNAQFKRVPKRSALSYDLEETFKDWTNQLSKQDLKLLCDTFFDCLTASGITSLNAFSLDDKAFLTLMRVIGSLQSIDHEKKKVMVKSLHQLMVTYGSYRRRDISENIHNHLQQLLTLTKGIK
>NZ_LR594046.1|WP_138125784.1|1260372_1261392_-|YeiH-family-putative-sulfate-export-transporter
MSTYLRKLPGLLLCLLLALPAWYLGRLFPIIGAPVFAILLGMLLALFYHHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTIATALLVAYGLQKWLGLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEIAKAISVIFLFNILAALLFPSLGQLLGLSNEGFAIFSGTAVNDTSSVTATATAWDAIHHSNTLDDATIVKLTRTLAIIPITLGLSLYRAKKEHEIVTEEGFSLRESFPRFILFFLLASLITTLMTSFGVSADVFHSLKELSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAFCWVAITLVSLGMQFALGIW
>NZ_LR594046.1|WP_003058453.1|1259740_1260166_-|PTS-mannose-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQSLEIIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMASGKDNIFLITNSNLATLLSVMFLNPDEALTKDKIVTVINESQVQLVDLSPATDSEDDFFD
>NZ_LR594046.1|WP_003051135.1|1259229_1259721_-|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEESIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELASLPNLDVFNQVLPSNTKVHLSQLVN
>NZ_LR594046.1|WP_003051133.1|1258404_1259214_-|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAEANHQGQLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITKGAFSNQTSFDSKESEEEDFFA
>NZ_LR594046.1|WP_003051128.1|1257580_1258408_-|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID
MTSQDNLTREERKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINHFYKTDKDKADALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPEFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASTGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLLVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>NZ_LR594046.1|WP_138125792.1|1267802_1268465_-|type-II-A-CRISPR-associated-protein-Csn2
MNLNFPLLDEPIPLRGGTILVLEDVCVFSKIVQHCYQYEEDSELKFFDHKMKAIKESEIMLVTDILGFDVNSPTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYIIDEDYFLITKNMV
>NZ_LR594046.1|WP_138125794.1|1268454_1268796_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIDRLRENNPHKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>NZ_LR594046.1|WP_138125796.1|1268792_1269662_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENILVIFCDDKRLPTAMLMPFYGRHDSSLQLSKQMSWIEEVKSEVWTTIIAQKILNQACYLGSCSYFEKSQSVMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVTGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSNTFSYNGKDMYLTNIVSDYTKKVVKALNNEGKGVPEFRI
>NZ_LR594046.1|WP_138125798.1|1269661_1273777_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWSVITDDYKVPSKKMKVFGNTGKQTIKKNLLGVILFDSGETAEATRLKRTARRRYTRRKNRIRYLQEIFSSEMSKVDDSFFHRLEESFLVEEDKKHERHPIFGNIIDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINESGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFSDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEEFYPFLKENREKIEKILTFRIPYYVGPLARGDSRFAWMTRKSDEAITPWNFEEVVDKGASAEAFIKKMTNFDEYLPTKKVLPKHSLLYEYFAVYNELTKVKYVTEGMRKPEFLSGEQKEAIVDLLFKTNRKVTVKQLKEDYFKKIECFASVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDKEMIEERLKKYANLFDDKVMKQLKRRHYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLINDDSLTFKEAIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQTVKIVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENMQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTERDENHKTIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKRFFYSNIMNFFKTEITLANGEIRKRPLIETNEETGEIVWDKGRDFATVRKVLSMLQVNIVKKTEVQTGALTNESIYARGSFDKLISRKHRFESSKYGGFGSPTVTYSVLVVAKSKVQDGKVKKIKTGKELIGITLLDKLVFEKNPLKFIEDKGYGNVQIDKCIKLPKYSLFEFENGTRRMLASVMANNNSRGDLQKANEMFLPAKLVTLLYHAHKIESSKELEHEAYILNHYNDLYQLLSYIERFASLYVDVEKNISKVKELFSNIESYSISEICSSVINLLTLTASGAPADFKFLGTTIPRKRYGSPQSILSSTLIHQSITGLYETRIDLSLLGGD
>NZ_LR594046.1|WP_138125800.1|1274254_1274884_-|TIGR01906-family-membrane-protein
MVENIKLFCSWLWLLAFAILMTIYSAWLWYPLEVEYLKLEQVVFMSKDAILHNYNGLLNYLTNPFETSLTFASFRSSTDGLKHFADVKWLFHLTQVIFLGFLYPTVKDFKQRFKTKNFWSIQRPLMIAALFPLMIGLMASVIGFENFFILFHKVLFVGDSNWLFDPLKDPVIWILPEVFFLHCFLFFITIYEALLWSLVGLARWQRPKM
>NZ_LR594046.1|WP_138125802.1|1274883_1275648_-|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQEKGLPYLLVTNNTTRTPEMVQDMLSKQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYDMLATATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGVKRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPVQPDHVLSSLDEWEL
>NZ_LR594046.1|WP_111716697.1|1275647_1276400_-|acyl-[acyl-carrier-protein]-thioesterase
MGLSYREDIKLPFELCDVKSDIKFPLLLDYCLTVSGRQSAQLGRSNDYLLEQYGLIWIVTDYEATIHRLPRFKETITIETQAMSYNKFFCYRQFYIYDQEGQLLVDILAYFALLNPETRKVASIPEDLVAPFETDFVKKLRRAPKMHLLEKPIDQDYRVRYFDIDMNGHVNNSKYLDWMYDVLGYEFLKAHEPLRMTLKYVKEVSPGGQITSSYQLDQLTSYHQITTAGQLNAQAMIEWRAIKQTESETD
>NZ_LR594046.1|WP_138125804.1|1276413_1277544_-|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLEALIQEFESYDIHDLKTLYIGGGTPTAITAAQLEYLLSHLERNLNLSYLEEFTIEANPGDLTPDKIEVLKQSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLAQVKENVTKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGTIVRDLQDQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NZ_LR594046.1|WP_138125806.1|1277605_1278247_-|hypothetical-protein
MTKQQIEKLADLLPPFAAKLYLDMIPEFQEGYASYVYQTQKEDTQNRRIKQLTKSFARLLDTPSFYVMPLSVQVGRQLLRNEEIAYHSLSSVGAIQAFEAAVEDEKEVLQLLGNGSRLALLVLEEANEAVHMDLGILTKVEQKVISTAMLTAIEEYLLATTEGNALQLTVTVEQGVARTFYQAHGFHQKADDLVFKPTDGKLICQMVKDLFEA
>NZ_LR594046.1|WP_138125808.1|1278370_1279726_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRRSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLTKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Crispr_ID: NZ_LR594046_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594046_2

1754164-1754241

Orphan

Consensus_repeat	Method
GTTCACTGAACGTACCACTCACTCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594046_2

>merge|NZ_LR594046|2|1754164-1754241|CRISPRCasFinder
GTTCACTGAACGTACCACTCACTCTTCGCCTCTAGGCTCATGGGCTAAAAACGTTCACTGAACGTACCACTCGCTCTT

>NZ_LR594046|2|2|1754164-1754241|CRISPRCasFinder
GTTCACTGAACGTACCACTCACTCTT	CGCCTCTAGGCTCATGGGCTAAAAAC
GTTCACTGAACGTACCACTCGCTCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594046.1\|WP_138126381.1\|1751609_1752401_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180910
NZ_LR594046.1\|WP_138126373.1\|1746977_1747712_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_LR594046.1\|WP_138126379.1\|1750123_1751098_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_LR594046.1\|WP_003052521.1\|1751098_1751533_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR594046.1\|WP_138126371.1\|1745228_1745729_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_LR594046.1\|WP_138126391.1\|1761764_1763204_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_LR594046.1\|WP_138127001.1\|1756810_1757845_-\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_LR594046.1\|WP_129556197.1\|1759278_1759986_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LR594046.1\|WP_003061408.1\|1760291_1760528_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LR594046.1\|WP_138126383.1\|1754282_1756109_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_LR594046.1\|WP_138126375.1\|1747723_1748644_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_LR594046.1\|WP_138126387.1\|1757979_1758549_-\|glucosaminidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224619
NZ_LR594046.1\|WP_138127003.1\|1760598_1761540_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_LR594046.1\|WP_138126377.1\|1748668_1749640_-\|enoyl-[acyl-carrier-protein]-reductase-FabK	unknown	unknown	gnl\|CDD\|132195
NZ_LR594046.1\|WP_138126385.1\|1756226_1756769_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237628
NZ_LR594046.1\|WP_003045024.1\|1749838_1750063_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_LR594046.1\|WP_111717467.1\|1752623_1753760_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237653
NZ_LR594046.1\|WP_138126389.1\|1758545_1759289_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	unknown	unknown	gnl\|CDD\|224788
NZ_LR594046.1\|WP_003052511.1\|1745730_1746963_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NZ_LR594046.1\|WP_138126393.1\|1763203_1764670_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572

Protein	Function_ID	Function_description	E-value
NZ_LR594046.1\|WP_138126381.1\|1751609_1752401_-\|enoyl-CoA-hydratase	gnl\|CDD\|180910	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional.	0
NZ_LR594046.1\|WP_138126373.1\|1746977_1747712_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	2.19395e-128
NZ_LR594046.1\|WP_138126379.1\|1750123_1751098_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	4.82258e-173
NZ_LR594046.1\|WP_003052521.1\|1751098_1751533_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.68173e-21
NZ_LR594046.1\|WP_138126371.1\|1745228_1745729_-\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	5.35249e-68
NZ_LR594046.1\|WP_138126391.1\|1761764_1763204_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_LR594046.1\|WP_138127001.1\|1756810_1757845_-\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	6.90142e-115
NZ_LR594046.1\|WP_129556197.1\|1759278_1759986_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.70241e-51
NZ_LR594046.1\|WP_003061408.1\|1760291_1760528_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.50695e-12
NZ_LR594046.1\|WP_138126383.1\|1754282_1756109_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_LR594046.1\|WP_138126375.1\|1747723_1748644_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	3.26562e-131
NZ_LR594046.1\|WP_138126387.1\|1757979_1758549_-\|glucosaminidase-domain-containing-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	9.65942e-47
NZ_LR594046.1\|WP_138127003.1\|1760598_1761540_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.16032e-22
NZ_LR594046.1\|WP_138126377.1\|1748668_1749640_-\|enoyl-[acyl-carrier-protein]-reductase-FabK	gnl\|CDD\|132195	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.	1.15061e-171
NZ_LR594046.1\|WP_138126385.1\|1756226_1756769_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237628	PRK14156, PRK14156, heat shock protein GrpE; Provisional.	2.81641e-95
NZ_LR594046.1\|WP_003045024.1\|1749838_1750063_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	2.82996e-19
NZ_LR594046.1\|WP_111717467.1\|1752623_1753760_-\|molecular-chaperone-DnaJ	gnl\|CDD\|237653	PRK14276, PRK14276, chaperone protein DnaJ; Provisional.	0
NZ_LR594046.1\|WP_138126389.1\|1758545_1759289_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	gnl\|CDD\|224788	COG1876, VanY, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	1.99991e-53
NZ_LR594046.1\|WP_003052511.1\|1745730_1746963_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NZ_LR594046.1\|WP_138126393.1\|1763203_1764670_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0

>NZ_LR594046.1|WP_111717467.1|1752623_1753760_-|molecular-chaperone-DnaJ
MNNTEFYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGANGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCSGSGAKPGTSPVTCHKCHGSGVMTVDTQTPLGMMRRQVTCDVCHGTGQEIKEPCPTCHGTGHEKKVHKVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLFVILNVLPSKKFERNGSTIYYSLDISFTQAALGDTVDIPTVHGDVEMAIPAGTQTGKTFRLKGKGAPKLRGGGQGDQHVTVNIVTPTKLNDAQKEALKAFAEASGEQPLHPKKKGFFDKVKDALEDI
>NZ_LR594046.1|WP_138126381.1|1751609_1752401_-|enoyl-CoA-hydratase
MPFNYIIFDIQDDLATLTLNRPEVSNGFNIPTCQEILQALTKVKDNPSVRFLMIKAVGKVFSVGGDLVEMQTAVEKDDVQSLVKIAELVQEISFEIKQLPKPVILCADGAVAGAAFNIALAADFCIASTQTKFIQAFVNVGLAPDAGGLFLLTRAVGLNRATHLVMTGEGVTAEKGLDYGFVYRAAESDKLDKVCLQLLKRLRRGSSNSYAGMKTLVWQSFFTGWEEYAKKELDIQEELAFKEDFKEGVRAYSERRRPNFQGK
>NZ_LR594046.1|WP_003052521.1|1751098_1751533_-|MarR-family-transcriptional-regulator
MEYDKINQYLVDIFNRILVIEEMSLKTSQFSDVSLKEMHTIEIIGKYDQVTPSDIARELMVTLGTVTTSLNKLEAKGYIERTRSSSDRRVVYLSLTKKGRLLDRLHAKFHKNMVGHVIADMSDEEMQALMRGLGNLHQFLEDLV
>NZ_LR594046.1|WP_138126379.1|1750123_1751098_-|ketoacyl-ACP-synthase-III
MVFSKISQVAHYAPKQLVTNDDLANIMDTSHEWIFSRTGIAQRHIAREELTSDLASRVAEQLLTKSGLAADAIDFIIVATISPDGTMPSTAAIVQATIGATRAFAFDLTAACSGFVFALAMADKLISSGSYQKGMVIGAETLSKLIDWKDRTTAVLFGDGAGGVLLEASQDQHLLAESLYTDGARGQHLTSGQTGLSSPFSLSQEVTHTIQMDGRAIFDFAIRDVSKNISGIIEQSGLTKDDLDYLLLHQANRRILDKMARKIDFPREKFLENMEHYGNTSAASIPILLSEAVQNGQIRLDGTQKVLLSGFGGGLTWGSLIVKI
>NZ_LR594046.1|WP_003045024.1|1749838_1750063_-|acyl-carrier-protein
MAVFEKVQEIIVEELGKETEEVTLETTFDDLDADSLDVFQVISEIEDAFDIQIETEEGLNTVGDLVAYVEEKTK
>NZ_LR594046.1|WP_138126377.1|1748668_1749640_-|enoyl-[acyl-carrier-protein]-reductase-FabK
MKTHITELLNIDYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGGNAPKEVVKANIDRVKAITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKYMERLHQAGIIVIPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVEAVSIPVIAAGGIADGRGAAAAFMLGAEAVQVGTRFVVAKESNAHQNFKDKILKAKDIDTVISAQVVGHPVRSIKNKLTSAYAKAEKEFLTDQKTADDIEEMGAGSLRNAVVDGDVVNGSVMAGQIAGLVKEEETCEAILKDIYYGAASVIQEESKRWQAVSLDN
>NZ_LR594046.1|WP_138126375.1|1747723_1748644_-|ACP-S-malonyltransferase
MTKTAFLFAGQGAQKLGMARDFYDHFAIVRETFDQASQVLGYDLRRLIDSDQEKLNQTSYTQPAILTSSIAIYRVLGLHHIKPDMVAGLSLGEYSALVASGALSFEDTLALVAKRGRLMEEAAPSGSGKMVAVMNTDAQIIEEACQLAAVHGVVSPANYNTPSQIVIGGQTEAVNVAVELLKEKGVKRLIPLNVSGPFHTALLKPASRLLARELEHYTFNDFNIPLVGNTEASIMKKDRIPELLARQVMEPVRFYDSIATLTENGVTQAIEIGPGKVLTGFVKKINKQLPCSSIEDMVSLRSFLDR
>NZ_LR594046.1|WP_138126373.1|1746977_1747712_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MEIKGKNIFITGSTRGIGLAMAHQFASLGANIVLNGRSAISDDLVASFSDYGVTVVAISGDVSEASDAKRMVSEAIEHLGSVDVLVNNAGITNDKLMLKMTEEDFERVLKINLTGAFNMTQAVLKPMSKARQGAIINVSSVVGLTGNIGQANYAASKVGLIGFTKSVAREVAARNVRVNAIAPGFIESDMTDVLSEKMQEQILGQIPMKRIGKAQEVAQLASFLAGQDYITGQVIAIDGGMTMQ
>NZ_LR594046.1|WP_003052511.1|1745730_1746963_-|beta-ketoacyl-ACP-synthase-II
MTFKRVVVTGYGLTSPIGHDPETFWNNLKTGQIGIGPITKFDTTDYAVKNAAEIQDFPFDKYFVKKDLNRFDMYSLYALYAAMEAVEHANLDIDSIDADRFGVIVASGIGGIQEIEEQVIRLHEKGPKRVKPMTLPKALPNMAAGNVAMKLKAQGVCKSINTACASSNDAIGDAFRAIKFGTQDVMMVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVLESLEHAQERGATILAEIVGYGNTCDAYHMTSPHPEGLGARKAIHLALQEAGIEASDINYVNAHGTSTPANEKGESQAIVAVLGKDVPVSSTKSFTGHLLGAAGAVEAIATIEAMRHHYVPMTAGTQALSEDIEANVIFGEGKEAAINYAISNTFGFGGHNAVLAFKRWED
>NZ_LR594046.1|WP_138126371.1|1745228_1745729_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MNIQEIKDLMAQFDASSLREFSFKTNEGELAFSKNEQHFVQAVSSQEQGTPAPQVTNVPSPVISEMPASTPPSESVVEETIPSKTAVAEGDIIESPLVGVAYLAASPDKPPFVAVGDTVKKGQTLVIIEAMKVMNEVPAPCDGVITEILVSNEDVIEFGQGLVRIK
>NZ_LR594046.1|WP_138126383.1|1754282_1756109_-|molecular-chaperone-DnaK
MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTNPETIISIKSKMGTSEKVAANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGAAGPLHLEMSLSRAKFDDLTRDLVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQHIVIKSNDGLSEEEIDRMMKDAEANAEADAKRKEEVDLKNEVDQAIFATEKTIKETEGKGFDTERDAAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGAEGAQTSDSSNDDGVVDGEFTEK
>NZ_LR594046.1|WP_138126385.1|1756226_1756769_-|nucleotide-exchange-factor-GrpE
MSKKAKEEQVKEESLDQTVEVEEVSTEEVVEETPEKTDLELANERAEEFENKYLRAHAEMQNIQRRANEERQNLQRYRSQDLAKKILPSLDNLERALAVEGLTDDVKKGIEMVQESLVQALKEEGIEEVAVESFDHNLHMAVQTLPADDEHPADSIAQVFQKGYKLHERLLRPAMVVVYN
>NZ_LR594046.1|WP_138127001.1|1756810_1757845_-|heat-inducible-transcriptional-repressor-HrcA
MITERQNDILNLIVELFTQTHEPVGSKALQSAIDSSSATIRNDMAKLERLGLLEKAHTSSGRMPSAAGFKYFVEHSLSLDSIDEQDVYQLVKAFDFEAFRLEDLLAKASQILADITGYTAVILDVEPARQKLTAFDIVQLSNHDALAVLTLDESKPLTVQFAIPKNFLSKDLLVLKEIVDERLLGRDVMDVHYKLRTEIPQIVQKYFTVTDNVLDLFDYIFAGLFQETVFVSGKVAALDYAGLATYQFLDHEQRLALSIRQSMAEDDMAMVRVADSKEAALANVTLLTYKFLIPYRGFGLLSLIGPIDMDYRRSVSLINVIGRILAVKLRDYYRYLNSNHYEVN
>NZ_LR594046.1|WP_138126387.1|1757979_1758549_-|glucosaminidase-domain-containing-protein
MRSRLKFPYFITLLLFFLVLIIGPLLFNGRMASATKEVNVGYSQDQFIKTLAPEVKPLAEHYGIRPSILIGQILLETDNGRTLLAAKYHNLFSKEADLGQPGIRLKDSLKSGQVVRYAVYKDRESSIRDYLSMLSQGQQIDKRLYRSLATEKGYKAPAQSLQDYRYSEDTTYAKRLIKVIEEKDLTSYD
>NZ_LR594046.1|WP_138126389.1|1758545_1759289_-|D-alanyl-D-alanine-carboxypeptidase-family-protein
MKHNHFKLLLQTLVVLLFVGGIYLFMKPEKQATKTPSSQQASSQKVVKNSKESTGLPKVSPKDWELILVNRDHMTEELSPELVDVNGVSVDKRIEQATADFLAAAQAIDPQEHLISGYRSVAYQAELYQSYIDQEMANDPSLTQEAAEALVQTYSQPAGASEHQTGLAIDMSTVDSLNASDPQVAQAVQKIAPEYGFVLRFPDGKTKSTGVGYEDWHYRYVGKASARYMTKHRLTLEEYISALKEKQ
>NZ_LR594046.1|WP_129556197.1|1759278_1759986_-|histidine-phosphatase-family-protein
MTKTRLYIARHGKTMFNTIGRAQGWSDTPLTKKGEEGIRELGLGLKDSGIPFKAAFSSDSGRTMQTMEIILRESENEFLPYTRDKRIREWCFGSLDGAYDSELFLGVLPRTKAFENRDNLRDVPYSELAESIVEVDTANWAEPWEVLRKRIWDGFEAIALSIQNAGGGNALVVSHGMTIGTFMWLIDPDREKQYIDNGSVTVVEFEDGQFTIKTIGDMSYRYRGREIIEAMSDEA
>NZ_LR594046.1|WP_003061408.1|1760291_1760528_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MIWSLIVGAFIGMIAGKITEKSQSMGCFTNIAAGLIGSAVGQRLFGDWGIQLAGMAVFPSILGAAIVIVLVSAIFGKR
>NZ_LR594046.1|WP_138127003.1|1760598_1761540_-|EamA-family-transporter
MSKTVKGSLMVLLAGIAWGISGVSGQYLMAHGMDVHLLTSLRLMISGVVLTALVLWRHKEKVIALVTTKKHFKELLIYSLLGLGLNQYAYLMAIRYSNAGTATVLQYLSPILVLIFVSATAKRLPTITESLAILLAILGTIIMACHGDLSHLAISPIGLFWGVFSALTYAYCVIKPVNMIKTWGSLIVIGLAMLMGGVFFPIVTRAWRYPLMLTAGNLVALIGIIGIGTIFAYTFFLKGASLIGPVKATLLASIEPVASVFFAIVLMKELFYVIDLLGMALILVAVLLISFRDLLLYQRERRLLKAVKRQKRF
>NZ_LR594046.1|WP_138126391.1|1761764_1763204_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNFETIIGLEVHVELNTNSKIFSPSSAHFGEDPNANTNVIDWSFPGVLPVMNKGVIDAGIKAALALNMDIHKEMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEIKLEDGSTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEQFGTKTELKNLNSFSNVRKGLEFEVERQAKLLRSGGVIRQETRRYDEANKGTILMRVKEGAADYRYFPEPDLPLYEIDDAWIDEMRAQLPQFPAQRRVKYEEELGLSAYDASQLTATKALSDFFETAVSLGGDAKQVSNWLQGEVAQFLNAEGKTIEEIALTPENLVEMIAIIADGTISSKIAKKVFVHLAKNGGSARAYVEKAGLVQISDPAVLVPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVAQQLLAQELQKLLD
>NZ_LR594046.1|WP_138126393.1|1763203_1764670_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSFNHKTIEELHDLLVAKEISATELTQATLEDIKSREEAVGSFITVSEEAALKQAAAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDATSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDSEIKETILGAAKQFEALGATVEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFADYDLILGPTTPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGISIPAGFVDGLPVGLQLIGPKYAEETIYQAAAAFEAVTDYHKQQPIIFGGDK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	JX409894	Streptococcus phage LYGO9, complete genome	34482-34511	0	1.0
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	JX409895	Streptococcus phage JX01, complete genome	3300-3329	0	1.0
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	MK448952	Streptococcus phage Javan472, complete genome	14624-14653	0	1.0
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	MK448682	Streptococcus phage Javan143, complete genome	11074-11103	0	1.0
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	NC_009819	Streptococcus phage P9, complete genome	14465-14494	0	1.0
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	MK448854	Streptococcus phage Javan146, complete genome	15140-15169	0	1.0
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	MK448854	Streptococcus phage Javan146, complete genome	16653-16682	1	0.967
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	MK448845	Streptococcus phage Javan118, complete genome	11557-11586	1	0.967
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK449010	Streptococcus phage Javan90, complete genome	16403-16432	1	0.967
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448790	Streptococcus phage Javan515, complete genome	16859-16888	1	0.967
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448783	Streptococcus phage Javan503, complete genome	16169-16198	1	0.967
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448833	Streptococcus phage Javan87, complete genome	16403-16432	1	0.967
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448848	Streptococcus phage Javan126, complete genome	28309-28338	1	0.967
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448857	Streptococcus phage Javan164, complete genome	28309-28338	1	0.967
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448677	Streptococcus phage Javan133, complete genome	29300-29329	1	0.967
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448859	Streptococcus phage Javan170, complete genome	34059-34088	1	0.967
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448688	Streptococcus phage Javan161, complete genome	34017-34046	1	0.967
NZ_LR594046_1	1.4\|1267371\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267371-1267400	30	MK448673	Streptococcus phage Javan119, complete genome	13761-13790	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448798	Streptococcus phage Javan533, complete genome	17186-17215	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	NC_028700	Streptococcus phage T12, complete genome	17035-17064	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448967	Streptococcus phage Javan510, complete genome	17187-17216	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	NC_004588	Streptococcus prophage 315.5, complete genome	17336-17365	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448681	Streptococcus phage Javan141, complete genome	16778-16807	2	0.933
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK448683	Streptococcus phage Javan149, complete genome	19316-19345	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448784	Streptococcus phage Javan505, complete genome	32864-32893	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448769	Streptococcus phage Javan471, complete genome	27332-27361	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448947	Streptococcus phage Javan458, complete genome	32864-32893	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448965	Streptococcus phage Javan506, complete genome	33233-33262	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448684	Streptococcus phage Javan151, complete genome	27332-27361	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448689	Streptococcus phage Javan163, complete genome	32864-32893	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448680	Streptococcus phage Javan139, complete genome	28963-28992	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448974	Streptococcus phage Javan524, complete genome	32864-32893	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448789	Streptococcus phage Javan513, complete genome	32863-32892	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	NC_009018	Streptococcus phage phi3396, complete genome	29523-29552	2	0.933
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448675	Streptococcus phage Javan129, complete genome	34548-34577	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448955	Streptococcus phage Javan478, complete genome	34857-34886	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448970	Streptococcus phage Javan516, complete genome	37866-37895	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448791	Streptococcus phage Javan517, complete genome	31717-31746	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448679	Streptococcus phage Javan137, complete genome	29874-29903	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448945	Streptococcus phage Javan454, complete genome	31820-31849	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448850	Streptococcus phage Javan132, complete genome	33648-33677	3	0.9
NZ_LR594046_1	1.7\|1267569\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267569-1267598	30	MK448676	Streptococcus phage Javan131, complete genome	36566-36595	3	0.9
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	DQ517338	Staphylococcus phage 80alpha, complete sequence	1508-1537	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	AF424781	Staphylococcus aureus phage phi 11, complete genome	1224-1253	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_008798	Staphylococcus phage phiETA2, complete genome	1198-1227	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	AP008954	Staphylococcus phage phiETA3 DNA, complete genome, strain: TY32	1197-1226	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_004615	Staphylococcus phage 11, complete genome	1224-1253	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_007048	Staphylococcus phage 69, complete genome	27970-27999	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	AP008953	Staphylococcus phage phiETA2 DNA, complete genome, strain: TY94	1198-1227	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_029010	Staphylococcus phage SA97, complete genome	33148-33177	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	M34832	Bacteriophage phi-11 integrase (int) and excisionase (xis) genes, complete cds	255-284	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	MK290764	Staphylococcus virus B122, complete genome	1198-1227	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_008799	Staphylococcus phage phiETA3, complete genome	1197-1226	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	AY954951	Bacteriophage 69, complete genome	27970-27999	4	0.867
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_009526	Staphylococcus phage 80alpha, complete genome	1508-1537	4	0.867
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	NC_008498	Lactobacillus brevis ATCC 367 plasmid 1, complete sequence	2950-2979	5	0.833
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	148819-148848	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	333109-333138	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1427701-1427730	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	64466-64495	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	63184-63213	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	63184-63213	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	MG592621	Vibrio phage 1.255.O._10N.286.45.F1, partial genome	153639-153668	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	MG592609	Vibrio phage 1.244.A._10N.261.54.C3, partial genome	153639-153668	6	0.8
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	MT408532	Synechococcus phage SynMITS9220M01, complete genome	22889-22918	6	0.8
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	J02448	Bacteriophage f1, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	MP220846	Sequence 1258 from Patent EP3498865	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	MB451296	JP 2018509174-A/8: COMPOSITIONS AND METHODS FOR DETECTING A BIOLOGICAL CONTAMINANT	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	V00604	Phage M13 genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JC011770	Sequence 1 from Patent EP2655614	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	V00606	Genome of bacteriophage f1 (closely related to phages fd and m13)	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	AB334720	Enterobacteria phage f1 DNA, complete genome, isolate: NBRC 20010	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	AB334721	Enterobacteria phage f1 DNA, complete genome, isolate: NBRC 20015	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	GQ153917	Mutant Enterobacteria phage f1 isolate F1_2, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	MP220845	Sequence 1257 from Patent EP3498865	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	MA648319	JP 2017099398-A/1: CONTINUOUS DIRECTED EVOLUTION	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JX412914	Enterobacteria phage M13 isolate WT variety Rutgers, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JF719732	Enterobacteria phage f1 isolate f1_1_FR, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	GQ153918	Mutant Enterobacteria phage f1 isolate F1_3, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	GQ153916	Mutant Enterobacteria phage f1 isolate F1_1, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	GQ153919	Enterobacteria phage f1 isolate F1_ancestral, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JB730582	Sequence 10 from Patent WO2013082114	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JF719733	Enterobacteria phage f1 isolate f1_2_FR, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	NC_003287	Enterobacteria phage M13, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	LQ653486	Sequence 8 from Patent WO2016160572	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JB730584	Sequence 12 from Patent WO2013082114	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	JF719734	Enterobacteria phage f1 isolate f1_3_FR, complete genome	450-479	7	0.767
NZ_LR594046_1	1.1\|1267173\|30\|NZ_LR594046\|CRISPRCasFinder,CRT	1267173-1267202	30	J02451	Enterobacteria phage fd strain 478, complete genome	450-479	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	LR877331	Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1	119351-119380	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MN101225	Klebsiella phage KPN1, complete genome	37274-37303	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MH333064	Klebsiella phage Mineola, complete genome	108376-108405	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MN434095	Klebsiella pneumoniae phage JIPh_Kp122, complete genome	98779-98808	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MN101229	Klebsiella phage KPN5, complete genome	14653-14682	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MG751100	Klebsiella phage KP1, complete genome	98345-98374	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	NC_028686	Klebsiella phage JD18, complete genome	98576-98605	7	0.767
NZ_LR594046_1	1.5\|1267437\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267437-1267466	30	MK421971	Klebsiella phage vB_KpnM_GF, partial genome	94146-94175	7	0.767
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP030069	Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence	32203-32232	7	0.767
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	9939-9968	7	0.767
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	NZ_CP011864	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence	34782-34811	7	0.767
NZ_LR594046_1	1.2\|1267239\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267239-1267268	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	395836-395865	8	0.733
NZ_LR594046_1	1.2\|1267239\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267239-1267268	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	427971-428000	8	0.733
NZ_LR594046_1	1.6\|1267503\|30\|NZ_LR594046\|CRISPRCasFinder,CRT,PILER-CR	1267503-1267532	30	MN694663	Marine virus AFVG_250M439, complete genome	43940-43969	9	0.7

1. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

2. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

3. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

4. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

5. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

6. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 0, identity: 1.0

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagctgttttgacactgctaatactatttt	Protospacer
******************************

7. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 1, identity: 0.967

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
tctttatacagttcggaaaacgatatcaag	Protospacer
**************.***************

8. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 1, identity: 0.967

cagctgttttgacactgctaatactatttt	CRISPR spacer
cagttgttttgacactgctaatactatttt	Protospacer
***.**************************

9. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.967

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttattataaaaatagcgcacagcaaat	Protospacer
*****************************.

10. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 1, identity: 0.967

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttattataaaaatagcgcacagcaaat	Protospacer
*****************************.

11. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 1, identity: 0.967

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttattataaaaatagcgcacagcaaat	Protospacer
*****************************.

12. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.967

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttattataaaaatagcgcacagcaaat	Protospacer
*****************************.

13. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 1, identity: 0.967

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaagtcgttg	Protospacer
*****************************.

14. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 1, identity: 0.967

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaagtcgttg	Protospacer
*****************************.

15. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 1, identity: 0.967

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaagtcgttg	Protospacer
*****************************.

16. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 1, identity: 0.967

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaagtcgttg	Protospacer
*****************************.

17. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 1, identity: 0.967

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaagtcgttg	Protospacer
*****************************.

18. spacer 1.4|1267371|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 2, identity: 0.933

cagctgttttgacactgctaatactatttt	CRISPR spacer
catttgttttgacactgctaatactatttt	Protospacer
** .**************************

19. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cccttattataaaaatagcgcacagcaaat	Protospacer
.****************************.

20. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cccttattataaaaatagcgcacagcaaat	Protospacer
.****************************.

21. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cccttattataaaaatagcgcacagcaaat	Protospacer
.****************************.

22. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cccttattataaaaatagcgcacagcaaat	Protospacer
.****************************.

23. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttattataaaaatatcgcacagcaaat	Protospacer
***************** ***********.

24. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 2, identity: 0.933

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
tccttgttataaaaatagcgcacagcaaat	Protospacer
*****.***********************.

25. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

26. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgtggaccttcgtagtaaggcaagtcgttg	Protospacer
**.**************************.

27. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

28. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

29. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgtggaccttcgtagtaaggcaagtcgttg	Protospacer
**.**************************.

30. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

31. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

32. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

33. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgaggaccttcgtagtaaggcaagtcgttg	Protospacer
** **************************.

34. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 2, identity: 0.933

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggtaagttgtta	Protospacer
********************.****.****

35. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaggttgttg	Protospacer
**********************.**.***.

36. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcatagtaaggcaagtcattg	Protospacer
***********.**************.**.

37. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcatagtaaggcaagtcattg	Protospacer
***********.**************.**.

38. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcatagtaaggcaagtcattg	Protospacer
***********.**************.**.

39. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaggttgttg	Protospacer
**********************.**.***.

40. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcatagtaaggcaagtcattg	Protospacer
***********.**************.**.

41. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaggttgttg	Protospacer
**********************.**.***.

42. spacer 1.7|1267569|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 3, identity: 0.9

tgcggaccttcgtagtaaggcaagtcgtta	CRISPR spacer
tgcggaccttcgtagtaaggcaggttgttg	Protospacer
**********************.**.***.

43. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to DQ517338 (Staphylococcus phage 80alpha, complete sequence) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

44. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to AF424781 (Staphylococcus aureus phage phi 11, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

45. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_008798 (Staphylococcus phage phiETA2, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

46. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to AP008954 (Staphylococcus phage phiETA3 DNA, complete genome, strain: TY32) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

47. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_004615 (Staphylococcus phage 11, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

48. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_007048 (Staphylococcus phage 69, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

49. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to AP008953 (Staphylococcus phage phiETA2 DNA, complete genome, strain: TY94) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

50. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_029010 (Staphylococcus phage SA97, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

51. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to M34832 (Bacteriophage phi-11 integrase (int) and excisionase (xis) genes, complete cds) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

52. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK290764 (Staphylococcus virus B122, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

53. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_008799 (Staphylococcus phage phiETA3, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

54. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to AY954951 (Bacteriophage 69, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

55. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_009526 (Staphylococcus phage 80alpha, complete genome) position: , mismatch: 4, identity: 0.867

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttttaaatgtcataacatcacctacttttt	Protospacer
.********* *********** ***** *

56. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to NC_008498 (Lactobacillus brevis ATCC 367 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.833

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
tcaaaaaacagttcaaaaaacgatatcaag	Protospacer
**   * ********.**************

57. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
tgctcaatgagataagatcaccaactttat	Protospacer
. .* **** ***** **************

58. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
tgctcaatgagataagatcaccaactttat	Protospacer
. .* **** ***** **************

59. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
tgctcaatgagataagatcaccaactttat	Protospacer
. .* **** ***** **************

60. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
cactatatgtgataatatcaccaactttta	Protospacer
* .** *********.************

61. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
cactatatgtgataatatcaccaactttta	Protospacer
* .** *********.************

62. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
cactatatgtgataatatcaccaactttta	Protospacer
* .** *********.************

63. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MG592621 (Vibrio phage 1.255.O._10N.286.45.F1, partial genome) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ctgtaaatgtggtaacatcaccagcacttt	Protospacer
** ********.***********.* .* *

64. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MG592609 (Vibrio phage 1.244.A._10N.261.54.C3, partial genome) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ctgtaaatgtggtaacatcaccagcacttt	Protospacer
** ********.***********.* .* *

65. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MT408532 (Synechococcus phage SynMITS9220M01, complete genome) position: , mismatch: 6, identity: 0.8

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
cactgattctgataacatcaccaacattat	Protospacer
* .*.* * **************** ****

66. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to J02448 (Bacteriophage f1, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

67. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to MP220846 (Sequence 1258 from Patent EP3498865) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

68. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to MB451296 (JP 2018509174-A/8: COMPOSITIONS AND METHODS FOR DETECTING A BIOLOGICAL CONTAMINANT) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

69. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to V00604 (Phage M13 genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

70. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JC011770 (Sequence 1 from Patent EP2655614) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

71. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to V00606 (Genome of bacteriophage f1 (closely related to phages fd and m13)) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

72. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to AB334720 (Enterobacteria phage f1 DNA, complete genome, isolate: NBRC 20010) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

73. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to AB334721 (Enterobacteria phage f1 DNA, complete genome, isolate: NBRC 20015) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

74. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to GQ153917 (Mutant Enterobacteria phage f1 isolate F1_2, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

75. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to MP220845 (Sequence 1257 from Patent EP3498865) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

76. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to MA648319 (JP 2017099398-A/1: CONTINUOUS DIRECTED EVOLUTION) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

77. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JX412914 (Enterobacteria phage M13 isolate WT variety Rutgers, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

78. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JF719732 (Enterobacteria phage f1 isolate f1_1_FR, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

79. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to GQ153918 (Mutant Enterobacteria phage f1 isolate F1_3, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

80. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to GQ153916 (Mutant Enterobacteria phage f1 isolate F1_1, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

81. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to GQ153919 (Enterobacteria phage f1 isolate F1_ancestral, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

82. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JB730582 (Sequence 10 from Patent WO2013082114) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

83. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JF719733 (Enterobacteria phage f1 isolate f1_2_FR, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

84. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to NC_003287 (Enterobacteria phage M13, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

85. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to LQ653486 (Sequence 8 from Patent WO2016160572) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

86. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JB730584 (Sequence 12 from Patent WO2013082114) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

87. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to JF719734 (Enterobacteria phage f1 isolate f1_3_FR, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagagtgac	Protospacer
 ***** **************** * ..*

88. spacer 1.1|1267173|30|NZ_LR594046|CRISPRCasFinder,CRT matches to J02451 (Enterobacteria phage fd strain 478, complete genome) position: , mismatch: 7, identity: 0.767

tctttatacagttcagaaaacgatatcaag	CRISPR spacer
gctttaaacagttcagaaaacgagaatgac	Protospacer
 ***** **************** * ..*

89. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to LR877331 (Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

90. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MN101225 (Klebsiella phage KPN1, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

91. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MH333064 (Klebsiella phage Mineola, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

92. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MN434095 (Klebsiella pneumoniae phage JIPh_Kp122, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

93. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MN101229 (Klebsiella phage KPN5, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

94. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MG751100 (Klebsiella phage KP1, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

95. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NC_028686 (Klebsiella phage JD18, complete genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

96. spacer 1.5|1267437|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MK421971 (Klebsiella phage vB_KpnM_GF, partial genome) position: , mismatch: 7, identity: 0.767

tccttattataaaaatagcgcacagcaaac	CRISPR spacer
cacttattataaaaatggcgcacgcaaaat	Protospacer
. **************.******.  ***.

97. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030069 (Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence) position: , mismatch: 7, identity: 0.767

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttacgaatgtgagaacatcaccaacattaa	Protospacer
.* ..******* ************ ***

98. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024432 (Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence) position: , mismatch: 7, identity: 0.767

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttacgaatgtgagaacatcaccaacattaa	Protospacer
.* ..******* ************ ***

99. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011864 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.767

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
ttacgaatgtgagaacatcaccaacattaa	Protospacer
.* ..******* ************ ***

100. spacer 1.2|1267239|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 8, identity: 0.733

gcttctggattaacccctactgcatcataa	CRISPR spacer
gattctggattaacccctgctgctgactgt	Protospacer
* ****************.****    *.

101. spacer 1.2|1267239|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 8, identity: 0.733

gcttctggattaacccctactgcatcataa	CRISPR spacer
gattctggattaacccctgctgctgactgt	Protospacer
* ****************.****    *.

102. spacer 1.6|1267503|30|NZ_LR594046|CRISPRCasFinder,CRT,PILER-CR matches to MN694663 (Marine virus AFVG_250M439, complete genome) position: , mismatch: 9, identity: 0.7

ctttaaatgtgataacatcaccaactttat	CRISPR spacer
tcattccagtaataacatcaccaactttaa	Protospacer
.. *    **.******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38010 : 49487

Synechococcus_phage(25.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070001343.1\|38010_38484_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	2.2e-11	34.2
WP_138124326.1\|38743_39454_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.0e-41	40.9
WP_138124329.1\|39662_43388_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.7e-34	25.2
WP_138124332.1\|43506_44958_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-58	34.0
WP_003062570.1\|45109_46138_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	3.7e-64	43.6
WP_138124335.1\|46130_46685_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.9e-23	34.1
WP_138124338.1\|46735_48280_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.6e-76	48.4
WP_138124341.1\|48359_49487_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.1

DBSCAN-SWA_2

220738 : 227998

Streptococcus_phage(33.33%)

transposase,integrase

attL 212011:212025|attR 232911:232925

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
212011:212025	attL	NA	NA	NA	NA
WP_001188029.1\|220738_221065_+	DUF771 domain-containing protein	A0A075LYF5	Staphylococcus_phage	1.4e-06	29.5
WP_138124593.1\|221114_222236_+\|integrase	site-specific integrase	A7J266	Streptococcus_phage	3.3e-26	26.4
WP_138124595.1\|222674_223964_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	7.7e-96	45.7
WP_138124598.1\|223996_224563_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.5e-32	42.4
WP_138124600.1\|224595_226353_-	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	1.5e-33	28.1
WP_138124604.1\|226552_227998_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	5.1e-205	74.8
232911:232925	attR	NA	NA	NA	NA

DBSCAN-SWA_3

343702 : 403641

Planktothrix_phage(27.27%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138124780.1\|343702_344152_+\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA
WP_003060147.1\|344169_344877_+\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_138124782.1\|345036_345963_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003046614.1\|346307_347189_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_002982870.1\|347726_347915_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_003054896.1\|348068_348434_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_138124784.1\|348433_350098_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_003054883.1\|350333_351224_+	SPFH domain-containing protein	A0A1V0SL90	Klosneuvirus	2.3e-38	35.6
WP_000818733.1\|351360_351477_-	putative metal homeostasis protein	NA	NA	NA	NA
WP_129555291.1\|351641_352205_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_138124786.1\|352111_353023_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-64	49.1
WP_111715149.1\|353086_353827_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-25	38.8
WP_138124788.1\|353819_355388_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_138124790.1\|355586_357512_+	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_030127654.1\|357578_358418_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_138124792.1\|358561_359323_+	adaptor protein MecA	NA	NA	NA	NA
WP_138124794.1\|359329_360499_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_003061584.1\|360611_361382_+	Fe-S cluster assembly ATPase SufC	A0A1M7XV31	Cedratvirus	1.4e-07	24.2
WP_138124796.1\|361478_362741_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_138124798.1\|362771_363998_+	cysteine desulfurase	Q2XUY6	environmental_halophage	3.0e-105	45.3
WP_003062583.1\|363984_364461_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003054855.1\|364453_365872_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_129555299.1\|366045_367227_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.2e-11	28.8
WP_138124800.1\|367365_368604_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_129555301.1\|368935_370906_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138124802.1\|370971_372474_+	ABC transporter permease	NA	NA	NA	NA
WP_003049687.1\|372473_373400_+	ABC transporter permease	NA	NA	NA	NA
WP_003057822.1\|373408_374479_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_138124804.1\|374471_375395_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.9e-21	33.6
WP_138124759.1\|381008_381491_+	competence protein ComX	NA	NA	NA	NA
WP_138124806.1\|381407_382619_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	9.4e-35	31.9
WP_164714870.1\|382821_383349_+	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA
WP_138124808.1\|383348_384467_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA
WP_002991094.1\|384492_384801_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_138124810.1\|384869_385502_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_138124812.1\|385498_386092_+	HD domain-containing protein	NA	NA	NA	NA
WP_138124814.1\|386092_386605_+	cysteine hydrolase	NA	NA	NA	NA
WP_003049699.1\|386606_386960_+	ribosome silencing factor	NA	NA	NA	NA
WP_111715207.1\|387007_387751_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_138124816.1\|387825_388923_+	nucleotidyltransferase	NA	NA	NA	NA
WP_138124818.1\|389994_391008_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	7.8e-35	31.9
WP_172601468.1\|392836_393760_+	Muscle M-line assembly protein unc-89	NA	NA	NA	NA
WP_138124821.1\|393923_394850_+	biotin synthase BioB	NA	NA	NA	NA
WP_003049713.1\|395018_395735_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_138124823.1\|395942_396785_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138124825.1\|396939_397794_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138124827.1\|397971_398817_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138124829.1\|400257_401322_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.0e-30	37.0
WP_003059039.1\|401322_402015_+	ABC transporter permease	NA	NA	NA	NA
WP_138124831.1\|402123_403641_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	5.4e-205	74.8

DBSCAN-SWA_4

459331 : 472219

Streptococcus_phage(76.92%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138124901.1\|459331_460096_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-17	28.3
WP_171841621.1\|460101_460806_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.0e-17	28.4
WP_111715501.1\|460850_461513_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	7.1e-61	57.4
WP_003049811.1\|461599_462235_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.8e-69	66.3
WP_138124903.1\|462250_463123_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.7e-55	41.4
WP_129555360.1\|463119_463920_+	signal peptidase II	NA	NA	NA	NA
WP_003058686.1\|463912_464236_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	7.0e-30	64.2
WP_138124905.1\|464240_465104_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.4e-117	76.7
WP_111715515.1\|465130_465523_+	hypothetical protein	NA	NA	NA	NA
WP_115246620.1\|465569_466199_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_138124907.1\|466315_467407_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.8e-130	62.6
WP_138124909.1\|467432_467984_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	4.7e-50	53.6
WP_138124911.1\|468044_468542_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	6.7e-40	52.3
WP_138124913.1\|468538_468895_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.4e-39	64.1
WP_129555291.1\|468981_469545_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_138124915.1\|469451_470363_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.5e-64	49.1
WP_138124918.1\|470416_470839_-	VOC family protein	NA	NA	NA	NA
WP_138124920.1\|470840_471230_-	VOC family protein	NA	NA	NA	NA
WP_046176975.1\|471391_472219_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.1

DBSCAN-SWA_5

1436417 : 1496240

Streptococcus_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138126009.1\|1436417_1437446_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_138126011.1\|1437450_1438671_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_138126013.1\|1438697_1440146_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.9e-204	74.6
WP_138126015.1\|1440356_1441418_-	serine hydrolase	NA	NA	NA	NA
WP_138126017.1\|1441584_1442190_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	7.2e-60	54.2
WP_138126019.1\|1442279_1443326_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_138126021.1\|1443406_1445650_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.4e-55	58.7
WP_138126023.1\|1445630_1446293_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_070001343.1\|1446733_1447207_-\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	2.2e-11	34.2
WP_172601443.1\|1447437_1448178_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_172601444.1\|1448217_1449072_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_046176932.1\|1449061_1449340_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_138126027.1\|1449457_1450975_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.0e-204	74.6
WP_129555446.1\|1450930_1452931_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	7.1e-64	33.2
WP_138126030.1\|1453057_1454677_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
WP_012767262.1\|1454905_1455736_-	hypothetical protein	NA	NA	NA	NA
WP_111717022.1\|1455759_1456422_-	ABC transporter permease	NA	NA	NA	NA
WP_138126032.1\|1456414_1457149_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	8.2e-18	28.8
WP_003058003.1\|1457357_1457741_-	PH domain-containing protein	A6N235	Microbacterium_phage	7.3e-10	42.1
WP_138126035.1\|1457868_1459413_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	2.8e-36	28.6
WP_126426886.1\|1459660_1460356_-	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_138126037.1\|1460459_1461827_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_138126039.1\|1462032_1463079_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_003057983.1\|1463250_1463847_-	recombination protein RecR	NA	NA	NA	NA
WP_138126041.1\|1463858_1465913_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_003051604.1\|1466019_1466790_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_138126043.1\|1466916_1467459_-	hypothetical protein	NA	NA	NA	NA
WP_138126045.1\|1467560_1468082_-	transcription repressor NadR	NA	NA	NA	NA
WP_003051611.1\|1468191_1468887_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_138126047.1\|1469126_1470062_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	3.3e-64	44.5
WP_014612444.1\|1470119_1470293_-	hypothetical protein	NA	NA	NA	NA
WP_138126049.1\|1470363_1472226_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.0e-88	33.7
WP_138126051.1\|1472441_1473314_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_003044261.1\|1474769_1475045_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.0e-25	73.0
WP_111717050.1\|1475143_1475731_-	YpmS family protein	NA	NA	NA	NA
WP_172601445.1\|1475708_1476551_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_172601446.1\|1476543_1477395_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.5e-12	36.2
WP_138126057.1\|1477623_1478520_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_138126059.1\|1478726_1480388_-	DNA repair protein RecN	NA	NA	NA	NA
WP_111717058.1\|1480406_1480877_-	arginine repressor	NA	NA	NA	NA
WP_129555428.1\|1480863_1481691_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_138126061.1\|1481683_1482556_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_002983901.1\|1482555_1482771_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_129555426.1\|1482748_1484089_-	exodeoxyribonuclease VII large subunit	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	6.5e-37	32.6
WP_070001343.1\|1484315_1484789_-\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	2.2e-11	34.2
WP_138126065.1\|1484986_1485835_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_138126067.1\|1485831_1486686_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.7e-38	38.2
WP_129555291.1\|1486873_1487437_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_115246010.1\|1487343_1488255_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.5e-64	49.1
WP_138126069.1\|1488373_1490068_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	2.9e-127	42.0
WP_138126071.1\|1490221_1491646_-	deoxyribodipyrimidine photo-lyase	A0A1V0SCV6	Indivirus	2.0e-60	30.4
WP_129555421.1\|1491838_1491988_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_111717082.1\|1494144_1494624_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_138126073.1\|1494767_1496240_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.0e-204	74.6

DBSCAN-SWA_6

1918065 : 1985359

Streptococcus_phage(58.7%)

tRNA,tail,holin,capsid,integrase,portal,protease,terminase,head

attL 1945096:1945113|attR 1979993:1980010

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003053372.1\|1918065_1919514_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_138126578.1\|1919646_1920915_-	MFS transporter	NA	NA	NA	NA
WP_138126580.1\|1921009_1921711_-	hypothetical protein	NA	NA	NA	NA
WP_003053367.1\|1921714_1922161_-	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_138126582.1\|1922390_1923107_-	TIGR00266 family protein	NA	NA	NA	NA
WP_138126584.1\|1923242_1923737_-	carbonic anhydrase	NA	NA	NA	NA
WP_138126586.1\|1923926_1925288_-	DNA repair protein RadA	NA	NA	NA	NA
WP_129556329.1\|1925370_1925817_-	dUTP diphosphatase	A5GYP0	Lactococcus_phage	4.5e-35	52.1
WP_138126588.1\|1925924_1926692_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_138126590.1\|1926810_1928595_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-44	28.6
WP_138126592.1\|1928594_1930304_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.4e-36	27.9
WP_003053369.1\|1930296_1930746_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003053365.1\|1930946_1931963_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_138126594.1\|1931994_1932897_+	UTP--glucose-1-phosphate uridylyltransferase HasC	A0A127AW70	Bacillus_phage	6.2e-76	51.9
WP_138126596.1\|1933077_1933704_+	hypothetical protein	NA	NA	NA	NA
WP_138126598.1\|1933880_1934555_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_172601456.1\|1934551_1935079_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_138126602.1\|1935615_1937184_-	fibronectin binding protein	NA	NA	NA	NA
WP_138126604.1\|1937618_1939124_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_138126606.1\|1939242_1940367_-	hypothetical protein	NA	NA	NA	NA
WP_003058263.1\|1940402_1940900_-	hypothetical protein	NA	NA	NA	NA
WP_138126608.1\|1941160_1942510_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_138126610.1\|1942759_1943332_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_012767582.1\|1943446_1944067_-	hypothetical protein	NA	NA	NA	NA
WP_138126613.1\|1944151_1944856_-	exotoxin	A0EX09	Staphylococcus_phage	8.4e-12	32.9
1945096:1945113	attL	NA	NA	NA	NA
WP_071127058.1\|1945221_1945626_-	type II toxin-antitoxin system HicB family antitoxin	A0A1P8VVW2	Streptococcus_phage	2.0e-66	97.8
WP_024376845.1\|1945685_1945871_-	type II toxin-antitoxin system HicA family toxin	A0A1P8VVU8	Streptococcus_phage	7.5e-29	98.4
WP_172601457.1\|1946080_1947286_-	N-acetylmuramoyl-L-alanine amidase	A0A0D3MK08	Leuconostoc_phage	5.8e-45	43.8
WP_138126617.1\|1947287_1947623_-\|holin	phage holin	A0A1P8VVK6	Streptococcus_phage	6.1e-53	99.1
WP_003058491.1\|1947615_1948083_-\|holin	phage holin family protein	A0A0M4R3G6	Streptococcus_phage	2.0e-78	100.0
WP_172601458.1\|1948090_1948252_-	hypothetical protein	A0A0M4S6G8	Streptococcus_phage	1.9e-20	98.1
WP_138126621.1\|1948283_1948712_-	DUF1366 domain-containing protein	A0A1P8VVN2	Streptococcus_phage	1.9e-70	97.2
WP_138126623.1\|1948762_1950649_-	hypothetical protein	Q6DMS9	Streptococcus_phage	3.1e-154	47.1
WP_138126625.1\|1950660_1953126_-\|tail	phage tail protein	A0A1C8E983	Bacillus_phage	2.1e-94	49.0
WP_071127064.1\|1953122_1953800_-\|tail	phage tail family protein	A0A1C8EA72	Bacillus_phage	1.0e-46	41.2
WP_138126627.1\|1953799_1957207_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	9.5e-93	58.8
WP_071127066.1\|1957474_1957846_-	hypothetical protein	NA	NA	NA	NA
WP_003057267.1\|1957866_1958454_-	hypothetical protein	NA	NA	NA	NA
WP_002986168.1\|1958464_1958887_-	hypothetical protein	A0A1S7FZ20	Listeria_phage	3.1e-25	48.5
WP_002986170.1\|1958895_1959267_-	hypothetical protein	NA	NA	NA	NA
WP_037587954.1\|1959238_1959625_-	hypothetical protein	NA	NA	NA	NA
WP_138126629.1\|1959617_1959911_-\|head,tail	phage gp6-like head-tail connector protein	E2ELI6	Clostridium_phage	4.1e-05	35.4
WP_071127068.1\|1959930_1960218_-	hypothetical protein	M1PL08	Streptococcus_phage	2.4e-05	57.4
WP_138126631.1\|1960232_1961426_-\|capsid	phage major capsid protein	R4IBU5	Listeria_phage	6.2e-39	29.6
WP_138126633.1\|1961463_1962180_-\|protease	Clp protease ClpP	D2XR17	Bacillus_phage	1.1e-38	43.4
WP_138126635.1\|1962183_1963419_-\|portal	phage portal protein	A0A1S7FYX7	Listeria_phage	1.4e-73	37.4
WP_002986185.1\|1963618_1965277_-\|terminase	terminase large subunit	E2ELI2	Clostridium_phage	4.0e-129	44.4
WP_002986187.1\|1965257_1965605_-	hypothetical protein	NA	NA	NA	NA
WP_071127073.1\|1965727_1966057_-	HNH endonuclease	A0A1S7FZ53	Listeria_phage	5.1e-20	50.0
WP_002986191.1\|1966053_1966347_-	hypothetical protein	NA	NA	NA	NA
WP_071127093.1\|1966518_1967082_-\|integrase	site-specific integrase	A0A1S5SCL7	Streptococcus_phage	1.6e-61	61.0
WP_071127074.1\|1967176_1967596_-	sigma-70 family RNA polymerase sigma factor	A0A2H4JFX0	uncultured_Caudovirales_phage	1.6e-13	35.1
WP_050317758.1\|1967619_1967820_-	hypothetical protein	NA	NA	NA	NA
WP_172601459.1\|1967788_1967938_-	hypothetical protein	NA	NA	NA	NA
WP_172601460.1\|1967940_1968114_-	hypothetical protein	A0A1J0MGB9	Staphylococcus_phage	1.4e-05	46.9
WP_071127075.1\|1968110_1968440_-	helix-turn-helix transcriptional regulator	A0A1P8VVV5	Streptococcus_phage	1.4e-22	45.5
WP_071127076.1\|1968436_1968958_-	hypothetical protein	NA	NA	NA	NA
WP_071127078.1\|1969072_1969465_-	single-stranded DNA-binding protein	A0A1P8VVS8	Streptococcus_phage	2.4e-48	72.5
WP_172601461.1\|1969454_1969619_-	hypothetical protein	A0A1S5SIQ5	Streptococcus_phage	1.2e-09	60.4
WP_138126637.1\|1969618_1969924_-	DUF1372 family protein	A0A1X9I624	Streptococcus_phage	1.6e-23	51.5
WP_138126639.1\|1969920_1970412_-	hypothetical protein	A0A1P8VVP1	Streptococcus_phage	3.6e-70	78.5
WP_138126641.1\|1970413_1970653_-	hypothetical protein	A0A1P8VVT9	Streptococcus_phage	6.1e-31	84.8
WP_138126643.1\|1970649_1971963_-	DNA (cytosine-5-)-methyltransferase	A0A1S5SDI9	Streptococcus_phage	4.8e-170	75.0
WP_138126645.1\|1971962_1972775_-	ATP-binding protein	A0A1P8VVV9	Streptococcus_phage	2.6e-121	77.2
WP_138126647.1\|1972774_1973536_-	conserved phage C-terminal domain-containing protein	A0A220GFI5	Streptococcus_phage	8.2e-29	57.0
WP_138126649.1\|1973528_1974116_-	hypothetical protein	A0A1P8VVT8	Streptococcus_phage	1.8e-100	92.1
WP_138126651.1\|1974102_1975449_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	9.3e-209	84.7
WP_172601462.1\|1975435_1975624_-	hypothetical protein	NA	NA	NA	NA
WP_138126653.1\|1975642_1975903_-	hypothetical protein	A0A1S5SAL2	Streptococcus_phage	7.4e-30	76.7
WP_138126655.1\|1975967_1976705_-	ORF6C domain-containing protein	A3F617	Streptococcus_phage	5.4e-110	80.6
WP_002986282.1\|1976909_1977125_-	hypothetical protein	M1Q1B4	Streptococcus_phage	2.2e-24	78.6
WP_032467305.1\|1977435_1977786_+	helix-turn-helix transcriptional regulator	A0A1S5SFC6	Streptococcus_phage	4.8e-32	60.3
WP_002986288.1\|1977795_1978176_+	hypothetical protein	Q938N7	Temperate_phage	1.4e-40	64.0
WP_136286795.1\|1978187_1978721_+	hypothetical protein	A0A1S5SAH9	Streptococcus_phage	9.8e-21	55.3
WP_115251459.1\|1979288_1979990_+\|integrase	site-specific integrase	A0A141E0H2	Streptococcus_phage	3.1e-83	65.8
WP_138126657.1\|1980389_1981610_+	S-layer protein	NA	NA	NA	NA
1979993:1980010	attR	NA	NA	NA	NA
WP_138126659.1\|1981711_1982239_-	nucleoside deaminase	NA	NA	NA	NA
WP_003052949.1\|1982238_1983018_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003053494.1\|1983157_1983697_-	biotin transporter BioY	NA	NA	NA	NA
WP_081281257.1\|1983700_1984012_-	hypothetical protein	NA	NA	NA	NA
WP_003052954.1\|1984216_1985359_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.8e-86	43.6

DBSCAN-SWA_7

2108779 : 2119471

Streptococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003045749.1\|2108779_2109604_-	KilA-N domain-containing protein	Q4ZC41	Staphylococcus_virus	3.6e-78	54.2
WP_138126812.1\|2109683_2110226_-	helix-turn-helix transcriptional regulator	Q708R9	Streptococcus_phage	2.2e-15	50.0
WP_138126814.1\|2110377_2110605_+	helix-turn-helix transcriptional regulator	Q38329	Lactococcus_phage	7.4e-10	53.2
WP_138126816.1\|2110618_2111227_+	phage repressor protein	A0A1W6JPC3	Staphylococcus_phage	9.4e-44	47.4
WP_138126818.1\|2111247_2111655_+	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	1.7e-49	69.4
WP_138126820.1\|2111668_2111911_+	phage antirepressor protein	NA	NA	NA	NA
WP_138126822.1\|2112164_2112347_+	hypothetical protein	NA	NA	NA	NA
WP_138126824.1\|2112358_2112691_+	hypothetical protein	NA	NA	NA	NA
WP_138127009.1\|2112690_2112882_+	hypothetical protein	NA	NA	NA	NA
WP_003045763.1\|2112893_2113223_+	hypothetical protein	NA	NA	NA	NA
WP_003046150.1\|2113225_2113498_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.8e-18	60.0
WP_138126826.1\|2113498_2114356_+	primase C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	1.1e-125	75.9
WP_003045771.1\|2114324_2116013_+	DNA primase	A0A1X9I717	Streptococcus_phage	1.0e-257	81.6
WP_138126828.1\|2116300_2116474_+	DUF2758 domain-containing protein	A0A1X9I5U0	Streptococcus_phage	4.6e-12	61.4
WP_172601467.1\|2116479_2116653_+	hypothetical protein	NA	NA	NA	NA
WP_138126830.1\|2116654_2117212_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	1.4e-30	56.6
WP_138126832.1\|2117285_2117774_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	3.0e-48	58.0
WP_138126834.1\|2118101_2118578_-	hypothetical protein	NA	NA	NA	NA
WP_138126836.1\|2118756_2119119_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_138126838.1\|2119093_2119471_+	DUF1492 domain-containing protein	A0A141E173	Streptococcus_phage	3.3e-07	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR594046

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection