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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LR657304 Pseudomonas aeruginosa PAK chromosome 1 4 crisprs csa3,DEDDh,cas3,RT,DinG,WYL 1 1 5 0

Results visualization

1. NZ_LR657304
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR657304_1 330865-330978 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR657304_2 780009-780122 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR657304_3 1880053-1880154 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR657304_4 6310433-6310592 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LR657304_4 4.1|6310483|60|NZ_LR657304|CRISPRCasFinder 6310483-6310542 60 NZ_LR657304.1 6310702-6310761 1 0.983

1. spacer 4.1|6310483|60|NZ_LR657304|CRISPRCasFinder matches to position: 6310702-6310761, mismatch: 1, identity: 0.983

ttcgtcgttcagcccacccccggcccggccatcctggccggtcgttcgcattgaaaaacg	CRISPR spacer
ttcgtcgttcagcccacccccagcccggccatcctggccggtcgttcgcattgaaaaacg	Protospacer
*********************.**************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LR657304_3 3.1|1880078|52|NZ_LR657304|CRISPRCasFinder 1880078-1880129 52 NZ_CP042268 Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence 63791-63842 0 1.0

1. spacer 3.1|1880078|52|NZ_LR657304|CRISPRCasFinder matches to NZ_CP042268 (Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccggcgttattcgccctacgcggagggttcccagctttcgctccgccgttg	CRISPR spacer
tccggcgttattcgccctacgcggagggttcccagctttcgctccgccgttg	Protospacer
****************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 625257 : 705816 86 Pseudomonas_phage(35.9%) tail,tRNA,plate NA
DBSCAN-SWA_2 1438984 : 1448013 8 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_3 2617881 : 2624775 9 uncultured_Caudovirales_phage(83.33%) tRNA NA
DBSCAN-SWA_4 2904154 : 2943502 32 Planktothrix_phage(33.33%) plate,tail NA
DBSCAN-SWA_5 5324104 : 5361601 40 Pseudomonas_phage(57.14%) coat,tRNA,integrase attL 5351072:5351131|attR 5363014:5363095
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage