CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR698998	Paenibacillus odorifer isolate MGYG-HGUT-02414 chromosome 1	21 crisprs	WYL,csa3,DEDDh,DinG,cas3	2	6	9	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LR698998_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_1

301674-301750

Orphan

Consensus_repeat	Method
ATCAGGGAGTATTTCCCCAATTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_1

>merge|NZ_LR698998|1|301674-301750|CRISPRCasFinder
ATCAGGGAGTATTTCCCCAATTATGATCGTGTGATGCTTAAAGTGCAGAATATCAGGGAGGATTTCCCCAATTATGA

>NZ_LR698998|1|1|301674-301750|CRISPRCasFinder
ATCAGGGAGTATTTCCCCAATTATGA	TCGTGTGATGCTTAAAGTGCAGAAT
ATCAGGGAGGATTTCCCCAATTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076203331.1\|306924_309945_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_LR698998.1\|WP_111502278.1\|309941_311588_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309540
NZ_LR698998.1\|WP_076139027.1\|303395_304124_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235109
NZ_LR698998.1\|WP_111502266.1\|296198_297326_-\|polysaccharide-pyruvyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|377253
NZ_LR698998.1\|WP_111502276.1\|306073_306874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_162636625.1\|312646_313657_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223560
NZ_LR698998.1\|WP_147614382.1\|288570_289695_-\|endospore-germination-permease	unknown	unknown	gnl\|CDD\|273333
NZ_LR698998.1\|WP_111502270.1\|298601_299828_+\|Zn-dependent-hydrolase	unknown	unknown	gnl\|CDD\|236456
NZ_LR698998.1\|WP_111502268.1\|297322_298381_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_LR698998.1\|WP_111502274.1\|304280_305546_-\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
NZ_LR698998.1\|WP_111502286.1\|314227_314482_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111502284.1\|313921_314221_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111502280.1\|311997_312471_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_LR698998.1\|WP_076135418.1\|289731_291324_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_LR698998.1\|WP_111502262.1\|293340_294657_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_LR698998.1\|WP_111502260.1\|292254_293355_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|224919
NZ_LR698998.1\|WP_076206116.1\|300109_301243_+\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
NZ_LR698998.1\|WP_111502264.1\|294676_296224_-\|sugar-isomerase	unknown	unknown	gnl\|CDD\|240533
NZ_LR698998.1\|WP_111502272.1\|302057_303320_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225306
NZ_LR698998.1\|WP_036687251.1\|291470_292097_-\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076203331.1\|306924_309945_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	6.38526e-114
NZ_LR698998.1\|WP_076139027.1\|303395_304124_+\|hypothetical-protein	gnl\|CDD\|235109	PRK03187, tgl, transglutaminase; Provisional.	1.37088e-105
NZ_LR698998.1\|WP_111502266.1\|296198_297326_-\|polysaccharide-pyruvyl-transferase-family-protein	gnl\|CDD\|377253	pfam04230, PS_pyruv_trans, Polysaccharide pyruvyl transferase. Pyruvyl-transferases involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora.	1.94567e-31
NZ_LR698998.1\|WP_111502278.1\|309941_311588_-\|hypothetical-protein	gnl\|CDD\|309540	pfam04434, SWIM, SWIM zinc finger. This domain is found in bacterial, archaeal and eukaryotic proteins. It is predicted to be organized into two N-terminal beta-strands and a C-terminal alpha helix, thus possibly adopting a fold similar to that of the C2H2 zinc finger (pfam00096). SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts.	1.38599e-06
NZ_LR698998.1\|WP_162636625.1\|312646_313657_+\|DnaJ-domain-containing-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	7.98176e-69
NZ_LR698998.1\|WP_147614382.1\|288570_289695_-\|endospore-germination-permease	gnl\|CDD\|273333	TIGR00912, Spore_germination_protein_A2, spore germination protein (amino acid permease). This model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases. [Transport and binding proteins, Amino acids, peptides and amines].	1.59961e-51
NZ_LR698998.1\|WP_111502270.1\|298601_299828_+\|Zn-dependent-hydrolase	gnl\|CDD\|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	0
NZ_LR698998.1\|WP_111502268.1\|297322_298381_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.81921e-30
NZ_LR698998.1\|WP_111502274.1\|304280_305546_-\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	9.28234e-176
NZ_LR698998.1\|WP_111502280.1\|311997_312471_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.44664e-36
NZ_LR698998.1\|WP_076135418.1\|289731_291324_-\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_LR698998.1\|WP_111502262.1\|293340_294657_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.82778e-29
NZ_LR698998.1\|WP_111502260.1\|292254_293355_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|224919	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism].	1.11826e-66
NZ_LR698998.1\|WP_076206116.1\|300109_301243_+\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_LR698998.1\|WP_111502264.1\|294676_296224_-\|sugar-isomerase	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	8.9808e-09
NZ_LR698998.1\|WP_111502272.1\|302057_303320_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	2.11129e-20
NZ_LR698998.1\|WP_036687251.1\|291470_292097_-\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	9.91149e-112

>NZ_LR698998.1|WP_076206116.1|300109_301243_+|alanine-dehydrogenase
MIIGVPKEIKNNENRVAITPAGVVSLITEGHQVLVEAGAGVGSGFPNEEYVSAGAQLIEDAAKVWSSAEMVMKVKEPLATEYPYFRPGLILFTYLHLAPEPALAAALKDKGVFAIGYETVVHGRTLPLLTPMSEVAGRMSVQLGAQFLQKNYGGQGILLSGVPGVCRGKVSIIGGGVVGTNAAKMAIGLGADVTIVDLSAERLRQLDDIFGAQINTLISNPYNIAKAVAEADLLVGAVLIPGAKAPKLVTEEMVKTMKPGSVIVDVAIDQGGIVETIDRVTTHDNPVFVKHGVLHYSVANMPGAVPKTSTIALTNVTVPYALQIANKGVIKAIQDNDGLRSGVNVANGRITCQAVAEALGETPYSVEQAMEQTFTLI
>NZ_LR698998.1|WP_111502270.1|298601_299828_+|Zn-dependent-hydrolase
MQLQKIFVNGERLKNTIEAFADYGRTDKNGVTRLSLTEEDLKARDDFRACCEELGMSVKMDDMGTMYATLAGETSGPPIVIGSHMDTVKKGGRFDGVLGVIAGLEVVRTLVDYGIKPKFPVTIMNFTNEEGARFEPSMMASGVLSGKFDKSVMLNKKDPAGITFGEALEKSGYKGEMSNRITEATAYLELHIEQGPVLEKEELTIGLVDCVVGMACYEIEVTGESDHAGTTPMAMRKDALFAATDLIIELRSKLGALDSELVYTMGRMNVLPNIHTVIPNKVIFTIEARHKDMEIVREVEAIINGLPEQLLDCEVSKTKLWGRDTVWFDQNVCDLVEQAAQTLGYSSRKIASGAGHDAQFVASFLPSAMVFVPSVKGKSHCEEELTSYEDCEKGVNVVLETVMLILSR
>NZ_LR698998.1|WP_111502268.1|297322_298381_-|glycosyltransferase-family-2-protein
MNLSLVIPVYNIEQYITPMFNSLLDQSDPHFEVIIVDDGSTDNTYNVIEKILSRNPALFCKVIRTENHGVSAARNRGLAEATGNYVLFVDGDDYVSADLVSTLQSYTQDEQPEIICWGYNHVSEGRETLLSCTSDFSDMTGSEALARIFVNKSLRIWTGSIAYKREFLLLHGLGYTERCVNGEDQEFIYKALSRAARVISIPDILSFYLQRNSSISNSYNVNKFDVVDAFKRVDEYFKTYPFAELDTISPLLMNRELIENYFFNLKTCLNGTEGVSIQELLRDINHTYPKLNQEMDELIRRYRGDNRRLALYIRTFLISPLLYHRFISVERGLSRFKRNLLKGNGTRKESRI
>NZ_LR698998.1|WP_111502266.1|296198_297326_-|polysaccharide-pyruvyl-transferase-family-protein
MKKMLIYAYTEFNLGDDLFIKVLCERYPDTKFRICAPRLYKQCFKELPNLKVYPSDSLLLRGIGYICRKLKIHNVAHKYLADHSDGVVHIGGSIFMEADHWAEHFKNAEVIRNQNKPYYLLGSNFGPFTNQEYYDEHKRIFKDYTDICFREQYSYDLFKDLDNVRLAPDIIFQLDPPDIPNEPEDYIVLSVIKPSAKGLNGFDNLYYEKMKELAIYFIEKGYAVHFMSFCEHEGDQLAIEEIQRLIGPSYKDAIQVHLYKTNMEEVLSVLANASSIVASRFHAMILGWVFNKPVFPVAYSKKMINVMEDVGFTGLYADFNTLEQVQPAQIFESMLTCSMDVTLQIKQAERHFEHLDTYLPLYERGIRYESQAEHS
>NZ_LR698998.1|WP_111502264.1|294676_296224_-|sugar-isomerase
MKAKRSILNLSFGLGSQLITIILGFFIPRLIMVNYGSEANGLIASIVQIISYLALLEAGVGAASIQALYKPVASDNKNNINSILAATSSYYKKTGIYYFFAVLLLAIVYPLVISSEIDKLSIMVIILLTGMGGAINYYFQGKFKVLLAAEGKSYVETSIVTVANIMNSLIRILLLLQGVDIIAVQASYFILTLLQIIAFYIYMNKNYKWINLNLKPDYEAIGQKNSVLVHEISYLVFRNTDVLILTIFTNLKIVSIYVMYNMIFTIVDNIVQTINGSVKAALGQSYHESKEAFIKFYDAYEVYFMGLIFSILTVAYILILPFMKLYTAGVNDVNYIDMWLPVLFVVIKLLTNARTSSNNVITIAGHFKKTQNRSILESAINLVASVVFVIFMGIYGVLMGTIVALLYRSIDIVIYASKHLLERSPWVTFRRWLTNAVVFVGIILITTAIDIPIHSYLGLMIWGVLLGLVILPVYFVIGSLMEREVFLYTWEHLKKYRYKLKNKINAQPEVSGLSK
>NZ_LR698998.1|WP_111502262.1|293340_294657_-|glycosyltransferase-family-2-protein
MDHSEVLQQACYVFLNDLNDEINQSPTIQIDDTELLQRCRQIIDQEQNVQIKPYLETLSEVIHAYLTGRASEDTLKFYLSEQFNIVASDITGLIQGLVKMESRISDTEISYPTVQSLADSPKISVIITTYNRKAFLYQAIQSILMQDYPNKEITVIDDCSTDGTEELMQQHFGAEPRVIYMRNATNSGPGNNRRKAFAAHGDGEYVLFLDDDDYLIDMNYFSKAVRFHLLHPEISFVAANVFLEYSKAKQLKISNLQLSSIIKKRDYFMNFEKKGYPKPASTLTTVFKREALMAMDILDMNMVNDASIYLRSLLVGDAGFIDVIAGVYRIHGNNITFNLSQGFLIENLEEKKLIKNMAVQKYGYNAQEMTEWFNHNAYDTISYYLLNSAKDATDFKFMYHWALNHCPLIYNQLKNEFRMKLIKKQLLRISLLRTLLGR
>NZ_LR698998.1|WP_111502260.1|292254_293355_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MNEIKTVQEAFNETAYRIAGNGNRDVQVLKEALAAVENSTASDIYGTGEVIEDFQTKMANILGKETAVFFPSGTMAQQIALRIWCDEKEVKKVAYHPLCHLEIHEQDGMKELHHIEPVLLADKDRLITLEDVANLKEDIACLLLELPQREIGGQLPDYTELEAISAHCRARGIKLHLDGARLFEILPYYGKSAAEISALFDSVYISFYKGIGGIAGAILAGSEDFTKQSKIWKRRHGGDLISLYPYIISSDYYFRQREGKMQQYYEGAKELAAWVNQCHDVTTLPAQPVSNMFHMHFQMSKEQIEPILSAVYEATGIGLSAGIRATGEHTSYCEISIGDKYADIPKEKLRELFLLLDKLMSESSAE
>NZ_LR698998.1|WP_036687251.1|291470_292097_-|uridine-kinase
MLIIGIAGGTGSGKTTVARSVIDRLGTGKVTFISQDNYYKDHSHLSFAERESINYDHPFAFDNELLIEHLKSLREEQTAFAPVYDFTVHARSTTETVELKPNNIVIIEGLHVLSDENLREMLDIKVFVDADPDVRILRRVLRDIEERGRSIQSIHHQYLSTVKPMHEAFIEPSKKYADLIIPEGGHNEVGIQLLSILTEKHLYNDWTS
>NZ_LR698998.1|WP_076135418.1|289731_291324_-|spore-germination-protein
MGFLNRTITKVFKNPSLGHPNPTKELPKEPIKEKLQDNIQYIKTTLGNSTDLVIREFFIGSKHQIKAAIFYTDGLADSKAIQDFILESLILELPDPNLDTQTANYQLLKDHMLTVGDIKDATEFNSLFTSLLSGDVILLLNGYTKGFTIGMRDWKDRGVTESATETVIRGPKEAFTESLRTNTALIRRKIKDPNLWLETQQIGRVTQTDVALMYINGIVSDEILQEVHSRLDRIDIDGILESGYIEELIEDETYTPFPTIHHTERPDVIAAALMEGKVAILVDGTPIVMTVPTLFVSFMQTAEDYYQRADVSTLVRMLRYFSIFISLLAPSLYVAITTFHQEMLPTTLLISLAAQREGVPLPAFIEALLMELAFEIIREASVRMPQTIAQSVSIVGTLVIGTAAVDAGIVSAAMLIVVAITAISSFVLPSFDLALTIRMLRFPMMFLAASFGLFGIIIGVIAIVLHMCSLRSFGVPYLSPFAPYNLADQKDTFFRMPHWAMFTRPRLINKKNIVREKSTPPEKPGDLTEE
>NZ_LR698998.1|WP_147614382.1|288570_289695_-|endospore-germination-permease
MNKAMLEKGKISTRQLTILVMFLTIGDSILVIPPSTTHYARQNAWISALIGMIVGLLTIYMYSKFAKLYPKLTLIEAIQKAFGKWIGTILSLLTLMYFLIVTVGSMRELSEFVTSEILPRTPIPAVLILFMVIVIMATRLGIEVIGRAGEIFTPMIIILFLILTVAIIPQMEIVRLLPILEDGIKPVVRGSISITAYTFLEPVVFLMFLPYVHQQQKITKGLLQGCFLGGIIIFLTITISILVLGPDLTTRDIYPSYNIARRISVGGFFERVEAMIALLWMLTLFIEVTLYFYAFVLGLSQLFKLKEYRVLTLPTGLILVTLAPIIAPNYTYYNKVFDNYWVYYIITFGLFLPLVLLGVGMFRRALSKGLKSRS
>NZ_LR698998.1|WP_111502272.1|302057_303320_+|helix-turn-helix-domain-containing-protein
MTDKDPLFDRFFDSMESLADTISESLQSQVTIEDSNHHVIGYSSHEFESDSARISTIIGKRVPNAVIIGLRKKGIMQQLESAAYPIRIPAVLEVGLGPRLAICIKHQKEILGYIWVVDTGNLVEGHAENIVEKAAGIVGRYLLKQRGWKTKQDKTHEDFFWKLITSHYDNEANIKKDAEFWSILLPEKYYISVFESDKVIDDHLILRFRQVMASYSGLQLLFLTAEHNRLIILFSFSFVIEGAGGLSSFLHKTMEDMYKSEGCTLAAGCSLDYTEYMSAAIAYWEAVSIVEIKKLLPFHGRELLLYEEIGFWAYIPAIMEQKRSRIRKSPLLYPLKEHDREHKSDFLKTIAVYLSLSGNLKESAAFLHIHTNTLLYRLNRIAEITGKSLKDTGYRTSIFLDILTEETRQLNQWFVDARES
>NZ_LR698998.1|WP_076139027.1|303395_304124_+|hypothetical-protein
MVKEVRSPDALDFERKMRESIVESAEALNESGVDFATFDDSRCNPQFWTRTEIGGLQLNTGVEPTVGIKDIFRNGHLYAFECATAMVIVMYRATIEAIGEEAFNQYFKDLFLWDWNYDENLRLITNYNKELTQRGDVVYFKNPDHAPSKPEWQGENAIKLENDLFYGHGIGITTGEIIIDSLNQERVYGSDISAYLTDESVHPDFNYLQRLSAGTVLPAANNRSFRYTVCSRIGSRNYIYKI
>NZ_LR698998.1|WP_111502274.1|304280_305546_-|GTPase-HflX
MEQIREKAIIVGIQLQNETNFAYSMEELSNLAVACDLEVVGELSQKASRINPSHYIGTGKIEELSALLEAHDAPIVIFNDELSPSQIRNLESALDRQVIDRTILILNIFAERAKTKEAQLQVEVAKLQYMLPRLTGLRESLGRQGGGAGLKNRGAGETKLELDRRRIEERITALQVELQQQVARRQIQRKQRHKNEVPVVCLVGYTNTGKSSLMNVMVETYHPGSNKQVFAKDMLFATLETSVRSIELPDHKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVVDISDPQHQQHMAVTDETLKALGADQIPTVYAYNKADLTDLPYPQIEGDNVYLSAKQNSGMAELTALIRSHVFTDYVQCEILVPFDRGNVVSYFNEHAHVQSTSYEETGTRLELECRKSDFEKFRNDFIEL
>NZ_LR698998.1|WP_111502276.1|306073_306874_+|hypothetical-protein
MTLPVLSTNTIINLPVDGTRPIDQVVIKVVNNGSAGAFCYITGLSNSVSPQAIFIEELFELQYQETLSKTYVMVEDLFQFNFVYSQEQMKIQVFLVDTDGVWTAVDLEVFQVSRITSEIRDNVTVTSTDFAAISFMRRPGFAIPQGLAAEIRPAALDVMSKRPVRYMVVAGGTLDGTFENYPTPTTNIPVTDTALLVNYTCTTVTGGKVIMQGTGSGISGAYANLAVNLLNERLSYEFYDEPVTLVVNSLSGGDDLAVTFKMSEQW
>NZ_LR698998.1|WP_076203331.1|306924_309945_-|DEAD/DEAH-box-helicase
MNMHLRTLTIRLALSQYGDALIFGMNEREDLVPGLQLKQRLFAWHEASFYGTELTVQPAGEGVELVILPAEQVIPFFAEQKLLAHIEWSWEGDAAQLTELAPLLAICLEHKQYIPDISAYRAGRLQWTWDEGALAQVAVDSDTAKGALEALNGGSEFSRGLRAAFSAAVSQRYYSTEAEAGDLRSEFPLLFDRSGALAAGMDTAAWLIAIGWKADTAPFRPALQLLEPDEDESYWRLQLILQDKRDESALVPIRLADNGEPYGLWPAAWSAHVHERAAGWLERLRGSLPPERFAAGGDVLAEPLSDAIAWRFLTAESQRLLEAGWQVLLPAWWEAASRKKPRLRAKISSGEDKRSGGESLFGLDSIIDFDWRISIGDADLTEAEFAELVARGERLVRFKGKWVSLDPALLAQIQRAMAGMDKSQGLSFQDVLQLHLLGAGEEADAEATEEQLQEDAARLRLEVELNEHLISLIGQLGQRSEWPKPPVPAGLKAELRTYQHEGFAWLTFLRRFGLGACLADDMGLGKTVQLIAYLLHIQENTDASSARRQTDPPGWPSLIICPTSVLGNWQKELERFAPSLNVMLHYGSRRLDAGFFYGAASQADVVLTSYATAALDQELLKEFTWATICLDEAQNIKNAQTKQSAAVRSFPALHRVALTGTPIENRLSELWSIYDFITPGYLGSAKSFNDRFTNAIEKERDAKRTADLQNLVKPFMLRRKKKDPNIQLDLPDKNEMKTYVHLTAEQAALYDQTVNGLLERMKKLEGIERKGAILGALTGLKQLCDHPMLVTKEAIPELDTDNKLDTSFLINRSSKLERLLDMVKELRAEDERCLIFTQYVGMGKMLQAVLQQELGEPVLYLNGSTSKQARDRMIERFQTPAPSAEDGSTRPDASPSDQPNVFILSLKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTRDVQVHKFIALGTLEERIDEMLENKQQLSDNVISSSEGWITELSTEALKDLFTLRRDLND
>NZ_LR698998.1|WP_111502278.1|309941_311588_-|hypothetical-protein
MQPTYAMDDTQWSKLIQNVAYYFDDLTLKRGFQYYKQNRVQPFTMTEPRKINALVEGREDYRVTIDLDGFTNCHCNCPVSGHCKHMAAVLLNYAEQQNRSVQVLANAKAASFLPKISSTATSTSIGADATRQQQMKEMANRIASGKITEWREYFEFCVSPLAHTTRNPEYVSRALSAINKFKPKMLPETEKLFTLHAHLYLLEKLAKPSTLSVGQAAYAPSLGYYTQVAVSELQEVITGLLKKTLPLSPEQEQDLWPYVIDTLSYLRREMLTESRDRSRDQPSFSLSYDLLWRNWIYPNTGGTKLYLNEIEQLQQAEVELGASLSQHAWLLAQSRMYYYLMDDQKAWDLLNKAAERPGLHPDELMSFTSPLLDAGDWPRLVGWLVQIGPLLSSRLYNLNSYSTSWEEAVRHLPEAEPQMWDTLATMLPISGEVYEEMLITYEKWQTWMDYQLSIGKQPSEFRVKDLQPVEKNAPEVLLPFYHQAAERFVLDKNRHSYKAAVKLLKRLSKLYKKLKQEERWEKFLTAFAIRHSRLRALQEELRKGKLIP
>NZ_LR698998.1|WP_111502280.1|311997_312471_+|Hsp20/alpha-crystallin-family-protein
MFDMVPFGKRRDDAFGILAKSLNDVFNDDFFAPIKSSTMSFRTDIRESEQAYLIEAELPGLKKEEIDIDYASPYLTIKAVRKEENAEENKEHQIVRRERRYGEYVRRFYVQDIAEEEIRASLKDGVLKLEVPKRQKMQGKRIEIQDGDSNSTGSQSE
>NZ_LR698998.1|WP_162636625.1|312646_313657_+|DnaJ-domain-containing-protein
MASKSYYDALGVSKKATKQEIKKAYQKLAKKWHPDVNKAPEAEAKFKEAAEAYEVLGNEDKRKLYDEELLYGAQRGRASGGAASGTSSWDSNFGGSGSGSGSWSSGTYSTGGSGISEEDLFGMFFGNRGSADRAGFDFFSGSGTGRANGNPWGEARSTMQAQLDITLEQAYKGATVRVQVSDKTVDVNIPPRSHEDTIIKIAGNTPGGDVLLALHILPHDIYEIRDGDLYGMVEIAPWQAVLGGEVKVPLPGGGPVKLKIPAGIQSGKTLRIPGKGLKRENGANGDILFGIEIVIPEPISEAEKNLYRKLADSSPFEARAKRQSTGTQRQKAKVGN
>NZ_LR698998.1|WP_111502284.1|313921_314221_+|hypothetical-protein
MVEKKGKSALESAELGSMVEKRSKSALECAELGSMCEKRSKNALESAEWSSMVEKRSKSALESAELGSMVEKRSKSALESAEWSSMVEKRSKSALESAE
>NZ_LR698998.1|WP_111502286.1|314227_314482_+|hypothetical-protein
MVEKKGKSALESTGEGSMVEKKGKSALESAELGSLVEKRSKSALECAELGFMYEKRSRSALENAELGTMCEKRSKSALESAELG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_2

1064944-1065048

Orphan

Consensus_repeat	Method
TCGGACTCAGGTGACCTTAAAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_2

>merge|NZ_LR698998|2|1064944-1065048|CRISPRCasFinder
TCGGACTCAGGTGACCTTAAAAGCGGGAATCAGCGTCATTTGAGTCCGAATGCCCCGTGAGACAAACGTGGCTCGGTGCGATCGGACTCAGATGACCTTAAAAGC

>NZ_LR698998|2|2|1064944-1065048|CRISPRCasFinder
TCGGACTCAGGTGACCTTAAAAGC	GGGAATCAGCGTCATTTGAGTCCGAATGCCCCGTGAGACAAACGTGGCTCGGTGCGA
TCGGACTCAGATGACCTTAAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111502692.1\|1047823_1049086_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_042124373.1\|1063824_1064421_+\|cytochrome-aa3-quinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|239214
NZ_LR698998.1\|WP_111502694.1\|1052579_1055144_+\|DUF4430-domain-containing-protein	unknown	unknown	gnl\|CDD\|379618
NZ_LR698998.1\|WP_111502690.1\|1047099_1047741_+\|beta-mannanase	unknown	unknown	unknown
NZ_LR698998.1\|WP_076137135.1\|1072234_1072936_+\|noncanonical-pyrimidine-nucleotidase,-YjjG-family	unknown	unknown	gnl\|CDD\|162788
NZ_LR698998.1\|WP_076137120.1\|1049082_1052079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_052096796.1\|1074152_1074959_+\|AAC(3)-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|376807
NZ_LR698998.1\|WP_111502696.1\|1066862_1068887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111502700.1\|1075058_1075991_+\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_LR698998.1\|WP_036680823.1\|1061884_1063828_+\|cytochrome-aa3-quinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131928
NZ_LR698998.1\|WP_076137130.1\|1069253_1069814_+\|RNA-2'-phosphotransferase	unknown	unknown	gnl\|CDD\|179136
NZ_LR698998.1\|WP_111506098.1\|1059203_1060001_-\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
NZ_LR698998.1\|WP_076137136.1\|1072995_1073973_-\|ring-cleaving-dioxygenase	unknown	unknown	gnl\|CDD\|319935
NZ_LR698998.1\|WP_076137132.1\|1069848_1070370_+\|mismatch-specific-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381679
NZ_LR698998.1\|WP_036680830.1\|1065985_1066888_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LR698998.1\|WP_036680822.1\|1060826_1061846_+\|cytochrome-aa3-quinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|273621
NZ_LR698998.1\|WP_111502698.1\|1071130_1072066_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_LR698998.1\|WP_076137124.1\|1055346_1057053_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_LR698998.1\|WP_036680878.1\|1064425_1064716_+\|cytochrome-aa3-quinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|200218
NZ_LR698998.1\|WP_036680827.1\|1065603_1065993_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111502700.1\|1075058_1075991_+\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	2.33425e-178
NZ_LR698998.1\|WP_042124373.1\|1063824_1064421_+\|cytochrome-aa3-quinol-oxidase-subunit-III	gnl\|CDD\|239214	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Ubiquinol oxidases feature four subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of bovine CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in bovine CcO. Although not required for catalytic activity, subunit III appears to be involved in assembly of the multimer complex.	2.80351e-79
NZ_LR698998.1\|WP_111502694.1\|1052579_1055144_+\|DUF4430-domain-containing-protein	gnl\|CDD\|379618	pfam14478, DUF4430, Domain of unknown function (DUF4430). Although this family has overlaps with SLBB, the majority of its sequences are unique. Several family members, eg UniProtKB:A0RGA8, that do not overlap have an LPXTG-cell wall anchor at their C-terminus, a SSF_Family 10_polysaccharide_lyase or Glycosyltransferase structure associated with them in the middle region, as shown by InterPro, as well as this domain at the N-terminus.	4.51645e-11
NZ_LR698998.1\|WP_036680822.1\|1060826_1061846_+\|cytochrome-aa3-quinol-oxidase-subunit-II	gnl\|CDD\|273621	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b). [Energy metabolism, Electron transport].	5.99608e-89
NZ_LR698998.1\|WP_076137135.1\|1072234_1072936_+\|noncanonical-pyrimidine-nucleotidase,-YjjG-family	gnl\|CDD\|162788	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family. This HAD superfamily includes including YjjG from E. coli and YfnB from B. subtilis. YjjG has been shown to act as a house-cleaning enzyme, cleaving nucleotides with non-canonical nucleotide bases. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).	4.297e-69
NZ_LR698998.1\|WP_052096796.1\|1074152_1074959_+\|AAC(3)-family-N-acetyltransferase	gnl\|CDD\|376807	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase. This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.	8.82219e-76
NZ_LR698998.1\|WP_036680823.1\|1061884_1063828_+\|cytochrome-aa3-quinol-oxidase-subunit-I	gnl\|CDD\|131928	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I. This family (QoxB) encodes subunit I of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	0
NZ_LR698998.1\|WP_076137130.1\|1069253_1069814_+\|RNA-2'-phosphotransferase	gnl\|CDD\|179136	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed.	1.4674e-58
NZ_LR698998.1\|WP_111506098.1\|1059203_1060001_-\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	3.55837e-84
NZ_LR698998.1\|WP_076137136.1\|1072995_1073973_-\|ring-cleaving-dioxygenase	gnl\|CDD\|319935	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	6.0264e-69
NZ_LR698998.1\|WP_036680830.1\|1065985_1066888_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.28199e-74
NZ_LR698998.1\|WP_076137132.1\|1069848_1070370_+\|mismatch-specific-DNA-glycosylase	gnl\|CDD\|381679	cd10028, UDG-F2_TDG_MUG, Uracil DNA glycosylase family 2, includes thymine DNA glycosylase, mismatch-specific uracil DNA glycosylase and similar proteins. Uracil DNA glycosylase family 2 consists of thymine DNA glycosylase (TDG), which removes uracil and thymine from G:U and G:T mismatches in double-stranded DNA. It includes mismatch-specific uracil DNA glycosylase (MUG), the prokaryotic homolog of TDG. Escherichia coli MUG is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other..	8.67747e-79
NZ_LR698998.1\|WP_111502698.1\|1071130_1072066_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	4.84963e-79
NZ_LR698998.1\|WP_076137124.1\|1055346_1057053_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.40286e-51
NZ_LR698998.1\|WP_036680878.1\|1064425_1064716_+\|cytochrome-aa3-quinol-oxidase-subunit-IV	gnl\|CDD\|200218	TIGR02901, cytochrome_aa3_quinol_oxidase_subunit_IV, cytochrome aa3 quinol oxidase, subunit IV. This family (QoxD) encodes subunit IV of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	7.75451e-24
NZ_LR698998.1\|WP_036680827.1\|1065603_1065993_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.59211e-34

>NZ_LR698998.1|WP_036680878.1|1064425_1064716_+|cytochrome-aa3-quinol-oxidase-subunit-IV
MKQLFPIRHVMGFLASLVLSVAALAVIYLDLSNTANMAILLVTALIQASLQLFLFMHIGESADTKKELYINIAYALFVGLVTIFGTLFIFVWGWYA
>NZ_LR698998.1|WP_042124373.1|1063824_1064421_+|cytochrome-aa3-quinol-oxidase-subunit-III
MKIDASKPLEYSTEENSNKIFGFWVFLGAEIALFATLFTVYFVMVDRFASGPSGPDLFEIGPVMIETLLLLTSSFTIGLAVHAMRHGYQKAMMVFFGLTLLMGLGFLGIEITEFVTYVHEGATLQTSGFLSSLFVLLGTHGAHVSFGFLWGAAILIQLKRQGINPATANKSFIFSLYWHFLDVVWIFIFSFVYLKGLM
>NZ_LR698998.1|WP_036680823.1|1061884_1063828_+|cytochrome-aa3-quinol-oxidase-subunit-I
MDWDKFKVHGEPLIYGAMASIVLATIGIIVGLTYFKKWGYLWREWLTTVDHKRIGIMYILAALLMLFRGGVDAIMMKLQTAAPDMKFLDAQHYNEVFTTHGLIMILFMAMPFIIGLMNVIVPLQIGARDVAFPRLNAVSFWLFFFGAMLLNISFVIGGSPDAGWSAYFPLASLEFSPTVGNNYYSLALQISGIGTLITGVNFIVTILKMRAPGMKLMKMPMFTWSVLITNVIIVFAFPVLTVALALMMFDRLFGSQFFTMANGGMDMLWANLFWVWGHPEVYIVVLPAFGIYSEIIATFSKKNLYGYTSMVFSMLIISLLSFLVWAHHFYTMGQGAMVNSFFSITTMAIAVPTGVKIFNWLFTLRKGRITFTTPMLYTLAFIPIFTIGGVTGVMLAMASADYQYHNTMFLVAHFHYVLIPGAVFAVIAGFHYWFPKVFGFRLNERLGKHAFWWIIISFNVSFFPLFILGLKGMTRRQYTYSADTGFGPLSMVSFVGAIGLAIGFVILVYNIYWSTRYEPRDTDGDPWDARTLEWATKSPIPAYNFAVVPNVKTRDAYWSAKQDKVPLFEDKITKIHMPSNTGKPFILGVIFFIAGFSLVFSLWIPAILSGVGILIVLAAMSFDRDHGFYIPAEEVIATEKKLRGETV
>NZ_LR698998.1|WP_036680822.1|1060826_1061846_+|cytochrome-aa3-quinol-oxidase-subunit-II
MNKKGPLYALFLSLILLLPGCSSIAVLNPKGPAARTLSDTIILSIVMMLGVLAVVYILYVFVLLKYRAKKSNEDYIPPHEEGNKWLEAIWITIPIIIVAFLSVVTVKTTVDVENVAADYKDQKPLVIYASSSNWKWHFSYPEEGIETVNYVNIPVHRAVEFRLYSFGTISSLWIPQLGGQKYAMSDMITTLHLSADTVGSYVGRNANFNGKGFAHMEFETLAMTDKDYQEWVKDVKETAGPLTEDEFKGLLEMEHVGRKTYTNTHLSFSPPPGSHGDHMSNGGTEMDTDNGSMEHQDNKEIHPTPAPSSETEFNTEPNPELDEPTPSSPLEESTTHDGH
>NZ_LR698998.1|WP_111506098.1|1059203_1060001_-|polysaccharide-deacetylase
MVPLKLTSYLGFGISFKADQYLLRVKDGSATLDDASFVSKFKKELKPTATPGTSTPTVGKQGKSVYLTFDDGPTATTSTLLDILAKYDAKATFFMIGPNMNQHTAQVKRIANEGHGLALHGMTHRKEKFYASPAAALGEMDNDNAILKKITGQSTTLIRPPYGSKPYFTKTFRDKVLAQGYHLWDWNVDSEDWKYKDASTTIYNSVMNQVHKLQKSQTNPVILMHDQKATLKVLPRILESLKKEGYTFHVISSDLKPLNFWKDTR
>NZ_LR698998.1|WP_076137124.1|1055346_1057053_+|methyl-accepting-chemotaxis-protein
MKNLKVKYKIGLLLVFAVIMVNVVGGIGIITMTRMAEKTNETYNENLLPVSYVGQMRTNNRAIESYLLERLISVNASKNKELSESIQVKVQDNNELMNKVKAIQYNDPAIVSKIKEYESFLPDYRAQRDNIIKIADSNHNQEAYKVFSGEFNESREKMINLLKGISDSLLKDADEHNSDSMATAKSMRVNNTIMITFAWVICFVISIAIIRLITKPLKELQGLMKRAEDGDLTVVATYTAKDEIGQINSSFNNMLQGLRKMMQGIAESAELLSASSEEMSASAEQTSLASQMIAVSSGEIAAGFDEQTESINNTTRSIKAMTNDIAAVEGSSYEMSDLMGVVSGSSDRGVEAVDQIIVQMKEIDLSVTQSQEIVSNLGTLSQEINTIITTINGIATQTNLLALNASIEAARAGEHGRGFAVVAGEIRNLAEATRNSSLRVTDIITHIQKQTESAVESMALGTELVTNGVVQSHLVSQAFHEIQTSIKEATLQTAEIREAVAHVAMESQGVAAAMEQVNVISSKGAEGVQDTSAASQEQLSAMEEMSASAQYLAVLAEDLQKTLSSFKL
>NZ_LR698998.1|WP_111502694.1|1052579_1055144_+|DUF4430-domain-containing-protein
MKKIMSSKFVALGLALFMVISILGTSLAPAGQIFAEASAGSGLEATAAERINVADATYAAAEYLLKGGVQSDWQAIGLAQAGYKLPASYHSELEKKVKDAAGNFANVTDYARIVLAVRAIGADPTSFAGNGTTPGYNLIEKIYNNSKLSEQTLNNPVYALLALDSGKYNIPSDAKWTADKLLTEILSKQNPDGGFALTSGASEPDMTAITLTALAAHKNNPEAYLAGLQAVAWLSAAQDSHGGYGDSAESSAQAILGLTSFGVDPSGLEYTKNKVDLMENLLSYRLADGSFTHSRGGSSNVLATEQGLQALVAYNLLYKGSNSKLYDFSKSSIQSSLIYAPVTIEGPRATLAQGYAYAGNALGALEKLALQTNLPITNPSGSYVTGIGSIAAGSFGGYDGWMYVVSRDGKWMNPDVGMSDFVLKDSDQVLVYYAGDDTKLVDSVTLSKANLKEGDSFTVTVTSKTWKWDAATNTSSPVTAKAAGVQVEIGAQTVTTNAKGEAVFSGNVPAGDYTLTVTGYREGKAPTIAKYTKALKVISKNVTASLTVEGPEGLISEGALKASNALEALQQLGSTDDFKVDITKSSYGNFVSGIHGVSQGTYDGWWSFVVSRGGEWIYPSVGMDAFELQESDRVLVYYAGENTQVVDSVVLSPSQPKANEAFTVKVSQKKWVWNQESFTSDPVTSPAAGVQVSIGDKKVITNEQGVAVVDGGLPANSYTITVTGYAKDSVPSVARYTQSLTVGSSVIAPVKATATLSVIGDSRKGTILASTTVALKEGETAYSLLVSQLGTKVVSSGNAGSIYVKSIDGLAEFDGGPSSGWKYKTNRDADPSISADSYILQNGDTLYWYYTSGE
>NZ_LR698998.1|WP_076137120.1|1049082_1052079_+|hypothetical-protein
MNVFSGSTIAQQMYTRERRGVFRSTEGFDTVAKSDSLDNNFVKKILHPFCLYDAPAELTARGEKDEAAYPGALHLFHAENGDTVIGLSRYQAADFTGQRSAFFAHNYVVPASRSEEIVQSYGDWLHADFAERYTGELGGTLPELPSIPVVRTDRSPDPIAGLRLLGIDEGIFKALLQAVMLSVAGKKKIYVALNVPITELSARAVELTEILYSVLPYEFRRRLGVITYANEPQSRKYIHLSFVEKGSLRPGDRSIEKDYTFDLASGRMGNVDFGESRQPYADLVWKLLLLNPGDINDFVSFADQILRGESPEHKLSLSFYNELAIFYEIEQGNEHLYTENKSAVLSGLLSYLKPDGAIHSRIRLNDIFLERFDREFDLIRQRNVPDPAIMECFKEYFVLKDHNYRVRIVDYFINGMLHSVEAGRKDILSAAYGIIESNDELSAAYFQRVMSETYFRKQLLEPYMESRLAAASRSADILSFVLHWGRFLPVALEQSFAQNAVKDYLLEKLQLEHDPVASVAEIHEIVDKAEKDRRKGTGVAPKALSLMQDLAASADRFLLNRLSLSDMTQEELLEVVFLRYGNVVDWQPPLDRISKQKENALRAAYRWFGEEKPNEEIFTGLSPQELDDVQLLGRRLLKEARVLEPFERLPLAFYYTTQREGGPLDYDALLELLKRKAGSDKEIIYRFFAWSQGNPLFTVSNKKLQPGYRKAILKYFLSSDREAFKNREFRKNYVAAARPALQNVYNEARSQLASPLARWISRSRFRLLISGSITGILVIIAIIVFSMLRPDDTKTALPGTSPEPTPVQSAGNVLPPASVYLKDQSGEGDKGSSILVFTFASADDCVQFQPTEISLMSSSTEIDKSFKVAATNGTCPVPSTDGTDERNAADESDAAGTTGGTAEGADATNAVADVSPSPTPSSDAEDSTGLPSATAVTEGEQPSYQVEVTLEPGATILEKSMIKAGRFTLIVDPDPNIPPASDSSAEPSPTASPEGTVE
>NZ_LR698998.1|WP_111502692.1|1047823_1049086_+|hypothetical-protein
MSFFSRFMKKNQPEPRPLFYDIVCPYCFTKFSPEDVVFRAMHSREDDENYALGEDDALNKYRERFGLDTVDDIEAIINPAEIPEEYHHYTDHVLTGLTDRYGVLTRRRLCPSCHNELPVTAGKVPSNIISIIGASQVGKSVYMTSLIHTLQHTTAGHFDAACMPLNAEISRKFRTLYEEPLFERGDLLASTQKEKMQEPFIFQFVFKDENKPPLTLVFFDVAGEGMVDQDYLGLHGQHIKNSAGILFMVDPLQIRSIREKIHINIGDRPGEWVSQYDEPRDVVLTMFGDFIAYQEKSKTDIPTAVVLAKSDMLHSLKDEDGDYIKSNSNVFNNYVHRKTLNMDEFHNIDGEIRRFIGKVDRPFKDTMDVYFANTGYFAVSALGSNPVNQKIEGVVSPIRVDEPFIWLLHKLKYIEGSDGP
>NZ_LR698998.1|WP_111502690.1|1047099_1047741_+|beta-mannanase
MRYAEINASAPGITDVTSQVDDRFCTLRWRWPDGVQAVYIHKTSAEAADMGTGDDPPIGMKLYTREEYKSNNGYRDRLDEIGLISYTIFARLAENGETVLVRQNDGVNRVMVSAGKARIYYSIQQKKALFGKQKTVHMAITAEVPVARDVLCYVKKRGGHPAGKEDGILFPFVQDFAPGRNVLPPIEIGKDDFVRIFFTDGKKYGLYYELVPE
>NZ_LR698998.1|WP_036680827.1|1065603_1065993_+|GntR-family-transcriptional-regulator
MFELDVRSRKPIYEQLTDKVKEMILHGILQTDEQLPSVRTLSQQLTVNPNTIQKAYRELEREGYIYSLQGKGSFVAPMKKEQNAIKKAEVRNELLRLMAEAVYLGFTAAEISSLYQQVEKQREGGKSDD
>NZ_LR698998.1|WP_036680830.1|1065985_1066888_+|ABC-transporter-ATP-binding-protein
MIEIRGVSKLFQGEKAVDDISLTVHKGTIYGLLGSNGAGKTTLLKTLAGIYSPDKGTVRVDGEAVFEHPTTKQRVIFMPDAPYFFPQSTMLQMAAFYRSIYPSWNQKRFEDLGTVFQLDKKRKLSRFSKGMQRQASFWLCLSCMPDVLIMDEPIDGLDPVMRRQIKNLLFQEVAERELTVIISSHNLREIEDLCDHVGIMHGGKMLIEKDLDDLKADTHKIQVAFRDERHEIPLAAKLQVLHQERRGSVNLYIVKGDRERIKAAFQVYEPYVFDLLPLTLEEIFIYEMGDVGYDAQPLLL
>NZ_LR698998.1|WP_111502696.1|1066862_1068887_+|hypothetical-protein
MTRSHYYFNSSIFRQNFRQHGWIGIIYALGLLFALPLQLFMSNNPDAKPQEIDHLFRIAGSVQALFIITIPVAAGLFLFRYLQAKSPADLWHSLPLRREHLFTAHLTSGLTLLLLPVWLTAGVVAVVKPWSGNFYIFQGADIWQWCITVSILTLFLFCFSVFVGICTGQSILQGIIIYILLILPVVLISLINSHFAMYLYGYANANTNVNFRDSSLQMWSPFVHIVYYFTVKPFTNTELWIYGVLALLFIGLCYLLYRKRNTEKAGQAIAFGYFNPLFKAGVMLCAMLIAGNYFAQMKHQMGWVISGYAIGAIIGYVAAEMIVRKTWQIMTRKMVAEFAVYAVMIGLLLYIPVSSVTGYEARVPSGDKISGVYMGANYRLYTPTDGLHTTPYMGQNPFSDDKDYIETVRKLHQTVVAVRPEHTSQQYVYEYFTLAYQLENGHKLVREYWIPNKGFESELKAVKDTEAYKYEKYNLAFLDREMDLMWITNRNKRVAISDPGEILELKEIIKREILNMSYEVQIDKDGKPDVANIETEVKVKEDSNQVSSSYGYYYPWKSSFHELEKWMNEKGYADKIRITAEDIQSAEIIKDDYMDEQTPKNPTSPEQRVVLAREKNRTAVTKDKTLLTDILDHHFHYGVENGNYIVKLMYKEGYSDFVMLKESDMTPELKALLK
>NZ_LR698998.1|WP_076137130.1|1069253_1069814_+|RNA-2'-phosphotransferase
MLSNTAEVSLSKFMTKLLRHTPEQYGLILDPEDGSCRLDDLLSVIVSTPRWSEVTVGDIRQVVAGCDKQRLEIVDDRIKARYGHSHTKITYEPGTPPAVLFHGTHAGVLTVILEEGLQSMGRQYVHLSEGTHFASLAGSRRGKLILLTVDTIRAGQMGVTFYNAGNKVWLAGHIPPSCLKVYTPVS
>NZ_LR698998.1|WP_076137132.1|1069848_1070370_+|mismatch-specific-DNA-glycosylase
MDEIPDHLDHGLQIVFIGFNPSIRSGEVGHHYANPRNNFWRILHQSGLTPRLYDASEDGNLLKLGYGFTNIVARPTRGIDDITREEYQEGRELLRSKLEKYRPQVACFVGKGVYTEFSRRTKANWGFQGDVPPKVDGVREFVAPSSSGLVRMPMEEIVGIYRRLAEFTQENDG
>NZ_LR698998.1|WP_111502698.1|1071130_1072066_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MSFLIVYFLIPPLGKLAFRLDFVDKPRQDVERKIHREPIPLTASYAIFLGFFITYLVFARDFSMETVALFVGGVLLLTIGTVDDWYKTKGKDFPALPKLIVQVSAAILVYASGNAFTGFYNPFSGDYIVLPVILSFLLTIIWIFGVTTVINFSDGMDGLAGALTAISAVTLFVVALAKGQSSSAIMAISLIGVTLAYLRYNKPPAKIFMGDAGATFLGFILAVIALDGAFKQATVLSLFIPILALGVPIFDNIFVVVKRFIQGKSIYQADATQAHYRLLRAGLNQKQVVAVLCLISVCLSLSSIILLLIET
>NZ_LR698998.1|WP_076137135.1|1072234_1072936_+|noncanonical-pyrimidine-nucleotidase,-YjjG-family
MKYDVILFDADDTLFDYGMAESHALSNAFLHFGMPTGAADYAASYQEINHALWRDLEQGRISSAALRVERFNRLFAAHALELDPETFSEAYLRFLGEGTFLMQGAIELCGELADCRLAIITNGIKDVQTSRIQGSLLSDTFEQIIISEEAGCQKPETGIFDYAFAKLGIEDKEKVLIVGDSLTSDIQGGINYGIDTCWFNPLGKINESSVQPKYEIRNLSELLDIVGKATNLQ
>NZ_LR698998.1|WP_076137136.1|1072995_1073973_-|ring-cleaving-dioxygenase
MSLTLKGLHHVSAITGKAQENFKFYTEVLGLRLIKKTVNQDDISVYHLFYGDEKGNPGTELTFFELPMAGRNREGNNSISALSLRVPSDAALTYWEQRFTELNVEHGTIQVLGGRQTLSFRDHESQRFILVSDENDTGVAGGTPWAKSPVPAQYGIIGLGPAHLTVESAEHTAVVLEQLLGFRRIGTYSSTVAGQPDVLVFQTGEGGSGAEVHLEERNDLEQEHLGRGGVHHIAFRVDNEDELKQWIEHIRQAQLPNSGFVDRFYFRSLYFREPNGILFELATDGPGFATDEPMESLGESLALPPFLESKRQQIEAYLKPLDTRQ
>NZ_LR698998.1|WP_052096796.1|1074152_1074959_+|AAC(3)-family-N-acetyltransferase
MHTTTSLMKQLQELEIDPRGTILVHSSLKSVGEVEGGANTVLDALSEYMKDGLLVLPTHTWAYINADNPRFSVQDSPSCVGILPELFRKRPGVVRSWHPTHSVAALGVDAEAFTAGDERWDTPCARGSVWGKLLDRKAEIVLLGVDLRRNTFIHGIEEWVDIPGRMTDSHEELYTVTPGGDEIMVPSRRHCGLSWSEHFWKVERELEEGGAMRKGNFGDALVRVCGTVETTDILSLMLKENPDLFSDNEPLHGESKPDPLPKTRREQP
>NZ_LR698998.1|WP_111502700.1|1075058_1075991_+|manganese-dependent-inorganic-pyrophosphatase
MEKTLVFGHKNPDTDTICSAIAYAALKKELGWDAEPVRLGDVSGETQFALDHFGVEAPRLVENVAGEANQVILVDHNERQQSANDIDQVRVVEVIDHHRIANFETAHPLYYRAEPVGCTATILNKMYKENGVAIPKNIAGLMLSAIISDSLLFKSPTCTAEDVAAARELAEIAGVNAESYGLDMLKAGADLSDKSIAQLISLDAKEFKMGEYKVEIAQVNAVDVNDILSKQAELETALTSIIAEKELDLFLFVVTDILNNDSVGLALGRVAGAVEQAYNVKLDDNKALLKGVVSRKSQIVPVLTETIAKL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_3

1093092-1093193

Orphan

Consensus_repeat	Method
GAAGTCAAATTATTGAAGCTAATGCTCACAAAACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_3

>merge|NZ_LR698998|3|1093092-1093193|CRISPRCasFinder
GAAGTCAAATTATTGAAGCTAATGCTCACAAAACTTAAGTTTATGCTTTCGAAGTGAGTTTTGTACGAAGTCAAATCATTGAAGCTAATGCTCACAAAACTT

>NZ_LR698998|3|3|1093092-1093193|CRISPRCasFinder
GAAGTCAAATTATTGAAGCTAATGCTCACAAAACTT	AAGTTTATGCTTTCGAAGTGAGTTTTGTAC
GAAGTCAAATCATTGAAGCTAATGCTCACAAAACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076137155.1\|1094131_1094824_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_LR698998.1\|WP_076129269.1\|1091698_1092436_+\|capsular-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NZ_LR698998.1\|WP_170914256.1\|1084221_1084461_-\|NHLP-leader-peptide-family-natural-product-precursor	unknown	unknown	gnl\|CDD\|274786
NZ_LR698998.1\|WP_076207332.1\|1085592_1085886_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076129264.1\|1099351_1100737_+\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_LR698998.1\|WP_038568894.1\|1087955_1088810_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_LR698998.1\|WP_111502708.1\|1084555_1085491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_042185171.1\|1093210_1094101_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_LR698998.1\|WP_076137153.1\|1089127_1090774_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_LR698998.1\|WP_111502712.1\|1097907_1099386_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_LR698998.1\|WP_036676596.1\|1101607_1102795_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_LR698998.1\|WP_036676606.1\|1097137_1097911_+\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|377136
NZ_LR698998.1\|WP_036676593.1\|1102794_1103934_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_LR698998.1\|WP_036676623.1\|1090797_1091433_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR698998.1\|WP_036676610.1\|1094849_1095785_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_LR698998.1\|WP_111502706.1\|1082285_1084211_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR698998.1\|WP_036676617.1\|1092419_1093061_+\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_LR698998.1\|WP_038568901.1\|1100763_1101621_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_LR698998.1\|WP_111502710.1\|1085939_1087871_-\|family-20-glycosylhydrolase	unknown	unknown	gnl\|CDD\|119335
NZ_LR698998.1\|WP_036676609.1\|1095794_1097141_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_036676593.1\|1102794_1103934_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.10378e-52
NZ_LR698998.1\|WP_076129269.1\|1091698_1092436_+\|capsular-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	8.36491e-42
NZ_LR698998.1\|WP_170914256.1\|1084221_1084461_-\|NHLP-leader-peptide-family-natural-product-precursor	gnl\|CDD\|274786	TIGR03793, TOMM_pelo, NHLP leader peptide domain. This model represents a domain that is conserved among a large number of putative ribosomal natural products (RNP) precursor, including the thiazole/oxazole-modified microcins (TOMMs). As a leader peptide domain, likely to be removed from the mature product, this domain is unusual in several ways. First, it is longer than most previously described RNP leader peptides. Second, most of the domain is homologous to nitrile hydratase alpha subunits. Finally, it appears that this domain correlates with a specific family of cleavage/export proteins while members undergo modifications by different classes of peptide maturase, including cyclodehydratases, lantibiotic synthases, radical SAM peptide maturases. This family is expanded especially in Pelotomaculum thermopropionicum SI. [Cellular processes, Biosynthesis of natural products].	1.22393e-15
NZ_LR698998.1\|WP_076137155.1\|1094131_1094824_+\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	1.55621e-97
NZ_LR698998.1\|WP_076129264.1\|1099351_1100737_+\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.7775e-36
NZ_LR698998.1\|WP_038568894.1\|1087955_1088810_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	3.19766e-22
NZ_LR698998.1\|WP_042185171.1\|1093210_1094101_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.93262e-170
NZ_LR698998.1\|WP_076137153.1\|1089127_1090774_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.02238e-28
NZ_LR698998.1\|WP_111502712.1\|1097907_1099386_+\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.09432e-07
NZ_LR698998.1\|WP_036676596.1\|1101607_1102795_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.67082e-66
NZ_LR698998.1\|WP_036676606.1\|1097137_1097911_+\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|377136	pfam03808, Glyco_tran_WecB, Glycosyl transferase WecB/TagA/CpsF family.	7.05131e-85
NZ_LR698998.1\|WP_036676623.1\|1090797_1091433_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.65542e-63
NZ_LR698998.1\|WP_036676610.1\|1094849_1095785_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.21859e-27
NZ_LR698998.1\|WP_111502706.1\|1082285_1084211_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.92145e-39
NZ_LR698998.1\|WP_036676617.1\|1092419_1093061_+\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.44627e-63
NZ_LR698998.1\|WP_038568901.1\|1100763_1101621_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	5.99017e-68
NZ_LR698998.1\|WP_111502710.1\|1085939_1087871_-\|family-20-glycosylhydrolase	gnl\|CDD\|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	1.78883e-95
NZ_LR698998.1\|WP_036676609.1\|1095794_1097141_+\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	7.18583e-09

>NZ_LR698998.1|WP_036676617.1|1092419_1093061_+|CpsD/CapB-family-tyrosine-protein-kinase
MLRLNKSLVTDVNPSSHISESFRSLRTYIRQLGLAQGGGGKVLLFTSAEAGAGKTTILSNLAVSFVQDGKKVAVVDCNLRHPGLHTVFEVEGSDGLAAYLSGQEEADNIAVLGNLANLSVIPAGKTHVSPPDLLGNPKMTALLEELKENYDLILLDSPSAVDFSDARILAPQADGVILVARYGKSKRESIRKAKTLLEQTGSNLIGIAMNQAK
>NZ_LR698998.1|WP_076129269.1|1091698_1092436_+|capsular-biosynthesis-protein
MEKTILDYINLIKKRFWLIMVFVLISCATTYYVSKNFVEPVYSASGQLLVNNIAKAPESNNLNDLSFSLNLIESYKEIMKSPTIMKSVIENHPEFGLTADELSQKLEIKTSEKSQVINLNVQDESYTKAAGIVNAVSQTFIRELPSLMRVDNVTLLTPADPTDVPGPSNGGFAMNLIISFVVSLMAALGIILLMETLNGTLRSEKEAEYDLGLPVIASIATIRKRDLGKAAGDTRVKEGAYVAAK
>NZ_LR698998.1|WP_036676623.1|1090797_1091433_+|response-regulator-transcription-factor
MKIVIVDDHPLVRRGLASVISMQPNVQFAGEATNGQEALLVIEETQPDLVLIDLKLADESGLDVIKTARARGIVSKFILLTSSASREDFLKAEEVLVDGYVLKEALPEELLFAIQLVHKGRKYYDPGLMEDKMRMSGSSPTDELTPKEKEVLIELGQGACNREIASRLFISEFTVKKHVSQILAKLQVADRTQAALYANAVGLTKYEMSYE
>NZ_LR698998.1|WP_076137153.1|1089127_1090774_+|two-component-sensor-histidine-kinase
MKIKPTAEDKLIAYYRYFSLSLTSLMYLLDQTGPSIIYKSLIIAILVMFAQTFSFCYRRLRSRPKTLVLAVSIEMVGIIALTLFTGGYESSFRLYVLNPVLIAAGSLSIYFGWSLLLSYISIFAVLCYFFINSANRNFLEIVFINGNLFLTLVLTVIIMQIVNRMKRQREESNARTKETMEHIKSLYHIVETSSQHDFMNIGQVITDYVVKLTKLDKALFWFAKKSGEPAPQSRQTGWQQEEEQFLFSELGKHEHEWRLQREPIFRNLPGLGDFLLMPVRMSTRFVGMIGLKLESTEGLEGRRWYIQQLIFLSELSANILERHELGVIENRLIITNEQNRIADEMHDSVSQSLFGIVYATHSLKESWKRMSDHELEEQIELIHDSATKVAKELRITIYSLSSKKSGGPTWLGMVRSHLKSLSRLNDVDIDLKITGDDFSLPYPYHKALFRIISEATGNAIRHGAASRVDVELSLKPTWIRLLICDNGVGFDTDLLWIESEDSVSGLGMKNMQYLTQSLGGDFQLSSNESTGTRIMISIPVGVAELKNA
>NZ_LR698998.1|WP_038568894.1|1087955_1088810_+|helix-turn-helix-domain-containing-protein
MSKHMDYMISPYPIRIIDPKVESSKLKLKNIRVGQAGHLPGRTLFRSGVVFEHWAIVYIVSGSGSYMEIGGKEQQVREGSLYFFRPGYSYNFGPPPGGSWDEYYINFNGTRVSEWLESGLIAGGNVFQAQSIVGLTTLFEEVLERMESGEPVDADRAALLLERMLLECSFIIEEKSWNSQADYMRQIREDLNLCIYGEMDLEQIAAKHHVSMSTLRRLVRRSSGYPLHEYIHRLKMAEAKKLLFNTSLQIKEISSMLHYNDPFYFSRLFKKYMGIAPQLCRNNI
>NZ_LR698998.1|WP_111502710.1|1085939_1087871_-|family-20-glycosylhydrolase
MLNHSALLLFPNPREITLSQGSFHFPTSGSIVLPNMEEQSAMPAARKLQEVIAQALNLQLTLSIGLRPTVVSVCNFNYVPLLSAQAYEIVVDQKGIVVSYSSPVGAFYAAATLKQIIEQSGKSIPQLHIRDEPDFGARGLLIDISRNKIPKQETLYRIIDLMADLKMNELQLYIEGAPFAYESFPQVWELETPITGEEILLLDAYCKARYIELVPNQNSFGHMEGWLSRPEFNALAEIPEGFMLPKNLYAQDVYPEGLFMHPGTFDTEDPAVLPLLDKMFDDLLPYFSSNQFNVGCDETYELGLGKNKALAETQGKGQLYLSFLQKIYELVTKRGKTMQFWGDIIIQHPELIPQLPKDIIAMEWGYSAEHPFESDTLKFREAGIPFYVCPGTSSWNSITGRTDNMLANLRSAAIHGKNNGAIGYLITDWGDFGHWQHLPVSYAGFAYGAALSWSVDHNLEADTAQYLNRFIFADRSEGIGQLLLDLGNYYQLESSINRSNDAEMSLLLRTHLDNFLIIEKLTEEHFNHLEEYLLSIEARLSGLDLQCEDAALVLKELSNGIHFVKHAVQLGRIKLQLTSAPDSLDPALITKQISDLDVLLHQYRLLWTERNRLGGLEQSISKLQRLRGQYEALKSELSASVSS
>NZ_LR698998.1|WP_076207332.1|1085592_1085886_+|hypothetical-protein
MEWYTFGQMLMAIRMGQKAETPDGRMVMRTSTGLFWINGILQGKVVQIKDYLFSDLWRIYEDEESQQEGIGREQHEQREREMLENQYEELRWANRKR
>NZ_LR698998.1|WP_111502708.1|1084555_1085491_-|hypothetical-protein
MDWLNDYEDELRLVFQESRRIISEFPEPLNQQGMSYLEHFNVFNAESHKNYICYLLPFWLQKGCGISAEVTRQMSMGNVFFMLYFFIQDDLMDSQECSAYEKLPLANLLYVEFLNIYRILFPEPSAFWILFNRYIMEWADSVSNENTSDYFLNDRVKISYKASPLKLSSTAALLMSGKSDLVPQAEELIHSVLLTLQMLDDYEDWKEDLSAGNYNCLLSLTRKHLPNSSAAKLTSQEVEFYLFTANGLHTYTELAHDTHNKVTASDLNVPHLIAFHSMLVSNLQQISDSIEADKQLLLNGGLYHWLSKNVH
>NZ_LR698998.1|WP_170914256.1|1084221_1084461_-|NHLP-leader-peptide-family-natural-product-precursor
MSEAILRNQVIQKAWEDPSFKKRLLSDPKAALQEALGVIIPDSVTLKAVEEGSNEFYLVIPPSPTSDVLKATAAPRGSW
>NZ_LR698998.1|WP_111502706.1|1082285_1084211_+|sensor-histidine-kinase
MRLMIKVLHIAIALTLLLIGYSSIVVSAAAPYPSQEITSWQMRWGDGTENSGVEVPQNNDQRYWINVNATKEIPHLPSGVSTSWTRISIPNFSYISPSIYIDTLYALHVKVYVNDRLIFEEDRNYIKDNYSLLLPLSQSDSGKTLYIWTETLQDRIGIKNEVVIGEHNLLINDYIKNGLSDVILGCAFFLVAIVLFISSLYINRDYFSSVASLAVVIGSTGILSITYSPFIYTFYSNLGAISNVFLDLALFSLLPALTLLFEKIFGSGKYAIVRRFRQFQVIYSSFCLLCLLINFLSNNSYIEFYYFVSTTIIGFILILQFILLIVCVIIFSLKGNRDAIIFAIGFGTAAFTVVSELLWYYIHKGNYDLFLWKWGIVAFIISLIVILERRLAYSHQQVVNYSKELERFNNELQRSEKMEIISELAASVAHEVRNPLQVTRGFLQLLSEKSVGEEEIFMSMALSELDRASGIITDFLTFAKPEFETISSLNLYNEFKHIESIMQPLCHLNGGKMILDVSGELWVKGNSSKFKQAFINIIKNSIESFREEGFIYMSVYAEEENVIIHIKDNGEGMDADVLHRLGEPYFTKKNKGTGLGLMVTFRIIEAMQGKVKFTSKKGVGTESITILPLAEAPDDSHSLGG
>NZ_LR698998.1|WP_042185171.1|1093210_1094101_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKGKRAIEDHFDNAFELESRLLEDGKLDLLKEVQRSAKVEIHYIRQKEPKGLGHAVWCARRFIGDEPFGVMLGDDIVTGAVPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGKLYRVNNFVEKPPLGTAPSNLAIMGRYVFTPKIFKYLDLMEEGAGGEIQLTDAIQKLNQSERVYAYNFDGTRYDVGERLGYILTTLEFALQSEDLRYPVMDAMAEWLNKMGQTSLSS
>NZ_LR698998.1|WP_076137155.1|1094131_1094824_+|sugar-transferase
MSMQKLPEDYEAVLPKLYMLHTDERRKEAESYLIMKRIIDIFFSALGLLVLMPLFVVVAILIKLEDPKGKVFFRQNRVGKNEKQFPMYKFRSMVSNAEELKENLMAYNEVSGAMFKIKNDPRITQIGRFLRKTSIDELPQLWNVLIGQMSLVGPRPPLPEEVAQYTEYDKQRLTVTPGCTGYWQVNARNSVGFDEMVQLDLTYIHIRSTMLDLKIIAKTGLMLLGSKDAY
>NZ_LR698998.1|WP_036676610.1|1094849_1095785_+|glycosyltransferase-family-2-protein
MREYGDVPKLSIIICTYNRAPLLIKTLQSLLKLDHLEQAEIIVVDNCSKDDTEACVKKFIGKHGADVDIRYMMEPMQGLSAARNTGILASKSPLIAFLDDDAIPCQRWITTIVSTFESKPEVMAMGGKIAPIFESKRPDWLIKPFELPYTIVDLGSRIKEYPKQLHPCGANMAMRKLVFDISLFPLDLGRKGDSLLSGEETWLFGQIQKEGHSILYHPEMAVDHFVPAARLTEDWIMRRYYSQGISNAMKSEGLKGKLLLVGKTAAKLVYILADSILSRSKGRRLLNKCRLESIRGTLHMILNRERHSAAG
>NZ_LR698998.1|WP_036676609.1|1095794_1097141_+|O-antigen-ligase-family-protein
MTNFEWGSKLNVLPYGMLYLMSALFFGTAVIYQPMIAIAAVLLIILLGISISRPELISYFVLITTAISINFLYDGSMFGMEILSLYKLVIVMLLVPCILVNGLRFRLSHPLWAMVALLVITFGSSIWLPEMTSSIAVKAFIGLSIPFVFLLINWKKNVAELQIKIICMLPLVSVVVGLLLQLAHVHNFLNIEYTGAVRIQGANIPAHLAMLAFMGVAIPFIEVKRNPQQARFFYIMLVLNFFILIGTGTRGPILALGLTVLYYFYDILRQYLKGRTYLLIPLMGAFFLIMVAVFWQLDNFEKRSFERQTDTAVDLSGRSEAWEYFLNKAADSPWSGRGLGAVTVANDGTLYKGFVVPHNEYIRFYFDGGYIGAILLMFSLLAVFILVYRALAPPIKPYYLLFIAAFLIYSFSDNTLSTVQFIIPFCWYLNCLYRSSQPTDSPQKEVIR
>NZ_LR698998.1|WP_036676606.1|1097137_1097911_+|WecB/TagA/CpsF-family-glycosyltransferase
MSQVNMFDVNFDNYDFMDLLDYIDKTIQERNQSYILTCNVDHVIKLRKDKEFQTVYSKAGAVVADGMPLIWASKMLGKPLKQKVSGADLFNRLGNAFEQRKYRLFFLGSAEGVAERAAMNLKTAHPGINVVGCYSPSYGFEHNEEENERIIEMLTECQPDIVFVGVGAPKQEKWIYRHYTSYQAPISIGVGATFDFLSGSVKRAPSFMQKTGFEWFWRLSQEPGRLWKRYLVDDAQFLLLLLKELRKRDKVKEGGLE
>NZ_LR698998.1|WP_111502712.1|1097907_1099386_+|O-antigen-ligase-family-protein
MSVFTPPSLRFIKTVGLIGGTAAIGVSLPLIIGFSSAMLSSSNSLQGAILSAILFPAFLLAVLRPKMLVAYTLLIWAVAPELRRIADWSEGVYHSVSLLSLAPLLTGVTLIIPLLKEIHNIQKASTRIMLMFAVALGYGALIGLAKNGMGSVYDLANYIVPLLLLPYFAVTKFKPKDIDRLLTAFANIAVLVAIYGIVQYLTVPPWDVFWMKHADMMSIGNPYPLEIRVFSTLNSPGPAATFLAFALVPMILEKKWRGTLRWIGVLLVVICLLTTLVRAAWLILLVMLLMYIGTSPSKGKWKTLIQLVFVAAALFWVVPKLPGAEGLVARVETLSSVQEDHSYNERLSLWQNMLPMVAANPVGQGIGSVGQGTKLGNDGELGEYGIMDNGVIALLLTFGVLGAVFFFGALGAVVKQIFARVISRDQLQPYARLALATWTGAIVSLVSDNGFPGLKGYLIWMLIGLGLSAREITQSRRKGTPYAAVECKISPR
>NZ_LR698998.1|WP_076129264.1|1099351_1100737_+|oligosaccharide-flippase-family-protein
MQQLNAKSLPARTIWSSFRLFAKSKDNSSAAVKTMFVSVMILLINMLTGVLTARYLGPTGRGEQTAMINWSQFLAFSMSFGIPSALIYNAKKNPEDAGVLYRMALLLGTIFGVIAMIIGIVVLPYWLKSFSPEVVTFAQWSMILCPIIVISQINNAAFQFRGEYKRFNWIRYLVPLLTLTMIGILIALDQMNPFTTAVAYLLPGAPLFIGMTISLLRTYKVKMRGAYQNLKRLFTYGLGSYGNDLLGNFSTYIDQIVIAGLLRPADLGLYVVAVSLSRMVNFFSSSITIVLFPKASELSKEQAVELTFKAFRISTTFTMLGGVFLMLLAPLVIPLMYGKDFNAALTVFRLLLLEVTISGGTIILAQAFMALGKPKVVSMLQGFGLLLVIPMLFLLIPKFGLLGAGIAMLSSAILRFFFIVLNIKYTLKVKLPRLLITREDIQWMKTTMNSYIRKKPMDMNG
>NZ_LR698998.1|WP_038568901.1|1100763_1101621_+|glycosyltransferase-family-2-protein
MDSVKSVVGGQGNYPISAVIIAQDDEVRISKAIQSCRLFADEVVVIDGGSKDGTVQLSESLNCRVYVNPWPGYAKQREFGVERAVHDWVFLIDTDEVVSDELAASILELKPGLMDQSVAYSIYRIGDFMGRWLDRGEYLVRLYNRKAYGIRNSLVHEMPEVSEERTIRLTGTLWHYGYRSINDHVARFNKYTDLEAESAYAKGKRFRVSHLLLRPPARFLQKYFLHGLFKKGMSGFGVSVFWVMYEFMVGFKHYELIRSGKLTQHNAKTSQTEKENKGERSYAVQ
>NZ_LR698998.1|WP_036676596.1|1101607_1102795_+|glycosyltransferase-family-4-protein
MPYSDGLNIMTTGLSWPSLQPGGLNTYFKSVCEQLSSRNRVHALICSQETPATPEELIIHNAGDPKDGIWKRKDAFQRKAADLMGEGSGRIDILYTHFAPYGIGPALEAKKRGIPVVMTFHGPWNEEMKIEGQGIKHRVKTTIAKSIEHRAYKLADKFIVLSETFRDILHKLHGVPLHKIIVIPGAANVERFIPATNRLAIRRTLNLPEGATTVLTVRRLVNRMGLLQLLEAWKQVAERFPNAILLIGGKGPLRGELEEKIADYGLSNKVRLLGYIPDHELASYYQAADMFVVPSQALEGFGLITVEALSSGLPVMATPIGGNKEILQGFRPELLFKSSSSDHMAEGMIHMLSNRKLLPSRDECREHVLERYTWEHVTDQVESVFLQALGEEVTT
>NZ_LR698998.1|WP_036676593.1|1102794_1103934_+|glycosyltransferase-family-4-protein
MLRVAYIDHTAKWSGGEVALFNILTHIGEQIDPLVILAEDGALAERLREKGMDVRIIPLDESIRSRGRNAVNLGAPAAAFKLLAYGRKLAPLLKAEKVDCVHTNSLKSALYGAIAAKIAGVPLIWHIRDHIGAPYLKPIVAKGIRLLSRLLPNGVIANSHSTLNALELPRSKKTLVVYSAFAKAIGNGIGMRDQKDFNVLLVGRLAHWKGQHIVLEAAKSFKNEPRVKFWLAGDALFGEEAYKQELLQKIKNDELTNVSMLGHVDDIQGLMNTADLLIHTSVTPEPFGQVIVEGMAAGLPVIASNEGGPVEIVVQGETGLLIEPGDAAILADSIKWMLDHPEERRRMADNGMKRVKEHFVIENTVKDIVDYYKGLLAGT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_4

1198035-1198181

Orphan

Consensus_repeat	Method
GTGCTGGTGCTAGTGCTGGTGCT	CRISPRCasFinder

3 spacers

WYL

The CRISPR arrays of NZ_LR698998_4

>merge|NZ_LR698998|4|1198035-1198181|CRISPRCasFinder
TGGCTGGTGCAGGGTCTAGTGCTGGTAGGTGTGGAAGGGCGGCGTAGGTCTAGTGCTGGTGCTAGTGCTGGTGCTAGTGTTAGTGCTAGTGCTGGTGCTAGTGCTGGTGCTAGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCT

>NZ_LR698998|4|4|1198035-1198181|CRISPRCasFinder
TGGCTGGTGCAGGGTCTAGTGCT	GGTAGGTGTGGAAGGGC
GGCGTAGGTCTAGTGCTGGTGCT	AGTGCTGGTGCTAGTGTTA
GTGCTAGTGCTGGTGCTAGTGCT	GGTGCTAGTGCTGGTGCTG
GTGCTGGTGCTGGTGCTGGTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076138719.1\|1202214_1203171_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_LR698998.1\|WP_076138715.1\|1194463_1195396_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_LR698998.1\|WP_081389192.1\|1197174_1197870_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239632
NZ_LR698998.1\|WP_038568969.1\|1191164_1191716_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_LR698998.1\|WP_076130628.1\|1195564_1196974_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_LR698998.1\|WP_080742671.1\|1192845_1193646_-\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080
NZ_LR698998.1\|WP_036676445.1\|1191805_1192801_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_LR698998.1\|WP_036676471.1\|1189030_1190023_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381377
NZ_LR698998.1\|WP_076138713.1\|1190114_1190963_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380391
NZ_LR698998.1\|WP_081383827.1\|1193664_1194309_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|341387
NZ_LR698998.1\|WP_038568974.1\|1200441_1201173_-\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|206667
NZ_LR698998.1\|WP_111502750.1\|1207244_1207943_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LR698998.1\|WP_147614412.1\|1208086_1208359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036679832.1\|1205239_1206010_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_LR698998.1\|WP_036679839.1\|1201169_1201424_-\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_LR698998.1\|WP_111502746.1\|1203318_1205265_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225669
NZ_LR698998.1\|WP_076138717.1\|1199054_1200464_-\|ferrous-iron-transporter-B	unknown	unknown	gnl\|CDD\|223447
NZ_LR698998.1\|WP_111502744.1\|1201650_1202109_-\|SRPBCC-domain-containing-protein	unknown	unknown	gnl\|CDD\|176902
NZ_LR698998.1\|WP_036676473.1\|1188198_1188930_+\|ZIP-family-metal-transporter	unknown	unknown	gnl\|CDD\|223505
NZ_LR698998.1\|WP_111502748.1\|1206249_1207248_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076138719.1\|1202214_1203171_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	5.97672e-44
NZ_LR698998.1\|WP_076138715.1\|1194463_1195396_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	2.19537e-28
NZ_LR698998.1\|WP_081389192.1\|1197174_1197870_+\|hypothetical-protein	gnl\|CDD\|239632	cd03577, NTR_TIMP_like, NTR domain, TIMP-like subfamily; TIMPs, or tissue inibitors of metalloproteases, are essential regulators of extracellular matrix turnover and remodeling. They form complexes with matrix metalloproteases (MMPs) and inactivate them irreversibly by non-covalently binding their active zinc-binding sites. This group contains domains similar to the TIMP NTR domain, which binds MMPs. Members of this group may or may not function as MMP inhibitors.	2.03898e-13
NZ_LR698998.1\|WP_038568969.1\|1191164_1191716_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	1.96714e-09
NZ_LR698998.1\|WP_076130628.1\|1195564_1196974_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.46601e-126
NZ_LR698998.1\|WP_080742671.1\|1192845_1193646_-\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	3.85752e-132
NZ_LR698998.1\|WP_036676445.1\|1191805_1192801_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_LR698998.1\|WP_036676471.1\|1189030_1190023_-\|aldo/keto-reductase	gnl\|CDD\|381377	cd19151, AKR_AKR14A2, Salmonella enterica aldo-keto reductase (AKR) and similar protein. Salmonella enterica AKR is a founding member of aldo-keto reductase family 14 member A2 (AKR14A2).	0
NZ_LR698998.1\|WP_076138713.1\|1190114_1190963_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|380391	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain. This family contains bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included is MmsR, a bacterial transcriptional regulator thought to positively regulate the expression of the mmsAB operon. The mmsAB operon contains two structural genes involved in valine metabolism: mmsA which encodes methylmalonate-semialdehyde dehydrogenase, and mmsB which encodes 3-hydroxyisobutyrate dehydrogenase. The cupin domain of members of this subfamily does not contain a metal binding site.	8.68539e-29
NZ_LR698998.1\|WP_081383827.1\|1193664_1194309_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|341387	cd04617, CBS_pair_CcpN, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains of CcpN repressor. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.29286e-59
NZ_LR698998.1\|WP_038568974.1\|1200441_1201173_-\|50S-ribosome-binding-GTPase	gnl\|CDD\|206667	cd01879, FeoB, Ferrous iron transport protein B (FeoB) family. Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.	1.49283e-81
NZ_LR698998.1\|WP_111502750.1\|1207244_1207943_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.93027e-72
NZ_LR698998.1\|WP_036679832.1\|1205239_1206010_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.20781e-104
NZ_LR698998.1\|WP_036679839.1\|1201169_1201424_-\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	3.78217e-18
NZ_LR698998.1\|WP_111502746.1\|1203318_1205265_-\|ABC-transporter-permease	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	5.36161e-09
NZ_LR698998.1\|WP_076138717.1\|1199054_1200464_-\|ferrous-iron-transporter-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	1.13716e-77
NZ_LR698998.1\|WP_111502744.1\|1201650_1202109_-\|SRPBCC-domain-containing-protein	gnl\|CDD\|176902	cd08893, SRPBCC_CalC_Aha1-like_GntR-HTH, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins; some contain an N-terminal GntR family winged HTH DNA-binding domain. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. Some proteins in this subgroup contain an N-terminal winged helix-turn-helix DNA-binding domain found in the GntR family of proteins which include bacterial transcriptional regulators and their putative homologs from eukaryota and archaea.	2.36172e-36
NZ_LR698998.1\|WP_036676473.1\|1188198_1188930_+\|ZIP-family-metal-transporter	gnl\|CDD\|223505	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism].	1.27166e-35
NZ_LR698998.1\|WP_111502748.1\|1206249_1207248_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	1.6361e-44

>NZ_LR698998.1|WP_081389192.1|1197174_1197870_+|hypothetical-protein
MRKIKVRKINFRSPMMIFLGVLLIFTALLTVRPSVTYACSCVMPAEPLEALEKSTAVFVGKVVDMKEPSQGNIISSADPVKVTFEVDSSWKGVEGNQVTLTTALSSASCGFEFVEGESYIVYAYARDGGDSGNLEASLCSRTKRLTADSVDLKELGPGISATTPTASPEVTPNNSPESGAGSNEPDQAGDPAADSDSFPLVNVGISGIIIVLVAIAGAVLYRRRNDGTRKK
>NZ_LR698998.1|WP_076130628.1|1195564_1196974_+|PLP-dependent-aminotransferase-family-protein
MKKVVGAEHNHPLFRQVYEFLLNRMERGEWVAHDKLPSIRLLAEELKVHRLTVFKAYRRLTEDGKVYVKDKSGYYVAPIISLPAIEVGAAVSAYALTNPLSDIQRVPVKYQFSQALIDPGLLPNLFLSDYVKKVFDLYPKVMGTYASVQGDNELRETLSHHFRKQHRLQLTSEELLITSGAQQAINLIARIVLGPLDTVLVERPTYSVAMDIFRREGARLVPVEITPEGYDLEEVEALMKKHKPRMFYINPTHHNPTGYTVPVQQRKLLVELAERYRCLLVEDDPFRDMYFDEEPPPPFFAYDTEGWVIYISSFSKYVAPGLRICAVACRYPFMERLITAKSLADNGTPLLNQKIFLHYYTSPRLQQHLGKLRIALQVHKEIVEEELAGTGWEWTTPQGGLNLWVKLPEHLTMDRLFASSMAQSIAFVPGELFDPLGEMKSRLRLSYSFASEGVLREGIQRLIGIAHSL
>NZ_LR698998.1|WP_076138715.1|1194463_1195396_-|EamA-family-transporter
MILFAYALVCLIFGTTFLAIKIGVDAGAPPFFSAGLRFFVAGAVLFLWMVWKRKASFSLLLRKEMLFTGSALTFGTFAGLYWAEQYVSSGLAAVLSATGPIMILLLQTSILRQKAPAISLYGCIIGFTGVLLLVLPNLAVDISPLWLIGCAVVLIGECCYAVGAIYSKKVINSMPEVSPIALNAAQMMYGGALLFILSFATEKVHPAFLFSFETAGSLLYLTVIGSMVGHTLFYWLVAKTNPVFPSTWLYISPPIAVGVGFFFYKESVSWITILGVFTIIAGTILVNADALKQLLQKKKINTIALKKSNI
>NZ_LR698998.1|WP_081383827.1|1193664_1194309_-|helix-turn-helix-transcriptional-regulator
MIELTSRQIEIIDIVNKRAPITGEQIAESLNLTRPTIRSDLSVLVMLKYIDAKPKVGYFPGLKSSSRQGSGYLLQETMVKEIQSVPIVIRETTTIQDAVVTLFLQDVGTLIICDEEGKLTGVASRKDFLKVTLGNPGAVSMPVSMVMTRQPKVVTTSPDEPVLEAAHKMIFHEVDSLPVVVPSAAEDGGTKLDVVGRLTKTSIIKLLLELEAKG
>NZ_LR698998.1|WP_080742671.1|1192845_1193646_-|kinase/pyrophosphorylase
MEQSSNLITICSDSIGDTAEAVVQAVIHQFQNQQVTIKRYGNIRHEDELRKLMEEAAQHQGFVAYTLVQPELREMIREEAVRLDLRIVDIMGPMMQAFIDTFDDAPQQRPGLLHQLDENYFRRIEAIEFTVACDDGRDLGAMLKADIVLLGMSRTSKTPLSIFLAHRGKKVVNYPIIPEIGPPQELLSLPPNRLIGLTMKPEYMLKVRSERLKVLGLPTGSQYASLERITEEMEYAASLFNKLGCPVIDITDKAIEETAGIIMGYI
>NZ_LR698998.1|WP_036676445.1|1191805_1192801_-|class-II-fructose-bisphosphatase
MERELALEIVRVTELGALSSARWIGRGDKNAADDAATTAIRSMFDSVSIDGTVVIGEGEMDDAPMLYIGEKVGNQKGPSVDVAVDPLEGTEVVACGLHNAQSVIAIADKGSLLHAPDIYMEKLACGPELAGKLRLEDPVEITLQKACHYTGKSLSELTVMVLDRKRHEQLINSLREAGVRIKLLGHGDVAGAIAAALPDSDVDLYMGSGGAPEGVLAAAALKCLGGEMQGRLLPDGPIELQRCVRMGIANPTRVLYMEDMVGTGDVLFAATGVTSGEFLNGVRFIGKERAETHSVIMRAQSRTIRYIRSIHFLPGKEIPAAQTVRQNAVSL
>NZ_LR698998.1|WP_038568969.1|1191164_1191716_+|general-stress-protein
MNKRIVGVFAAEYEASRAIEELKRQGCRTEDISIIARNKADEETLRDESGTVAPEGMATGAATGGLLGGVTGLLMGIGALAIPGIGPIIAAGPLAATLAGAAIGAGSGGLVGGLIGLGIPEEEAESYDNYVDEGHILVMVDVEGEQKEQEVKQIFAKYNSLNAERFEKVANIDPLASERIGNK
>NZ_LR698998.1|WP_076138713.1|1190114_1190963_-|AraC-family-transcriptional-regulator
MAIFNYNSERPFRGNPDLHLHYWGREQCLPGHFFGPGVRDVYKIHFIHTGTGEVTVGEQTHYLKPGLAFLTYPHIVTAYTADIANPWTYSWVAFTGEQVDYILAKTALSPEHPIFPMDEQLMPNLYELLTQAAEASDSLDLPLKAIMYEFFSLLLRAVPAVPDVLPLPRQKSIYVEQCLHFLHTHYCENISVEMMSSSLKLDRKYLSSLFKRTIGMPPQQYLLNFRIAKACELLTETLCTIGEISRSVGYQDPLLFSRMFKKVKGCSPKEYRSRHLENDIVL
>NZ_LR698998.1|WP_036676471.1|1189030_1190023_-|aldo/keto-reductase
MMYNASATRYDNMKYNRTGKSGLLLPAISLGLWHNFGGNDLFENGRAMVRRAFDLGITHFDLANNYGPPAGSAEESFGQILKKDLTPYRDEMVISTKAGYYMWAGPYGEWGSKKYLVSSLDQSLKRMGLDYVDIFYHHRPDPNTPLEETMAALDLVVRQGKALYVGISNYGPEQTREAAQILRRLGTPCLIHQPNYSMMSRWIEDGLQDVLSEEGIGSIVFSPLQGGILTDRYLNGIAPDSRAAGPSVFLSENAITEEAIGKVRKLNEIAAARGQKMSQLALSWVLRGGKVTSALIGASKVSQIEDAVASLNAPELSAEELEQIEAILRG
>NZ_LR698998.1|WP_036676473.1|1188198_1188930_+|ZIP-family-metal-transporter
MESALIGSFVSAMATVLGAFPILFVKRLSEKWKDILVAFTAGIMVSASTFGLMPQSIKESGIIALTLGLITGVLLLDLIENNIPHIDVENKPGYTNMDSKALLVMIALFIHNIPEGLSTGFSYASEQASLGPTVAIAIGAQNMPEGLILAVFLMNSRTSKLKALGIVTLTGLMEMVSAVIGYFTASYLHNVVGYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLIMVYITQIFG
>NZ_LR698998.1|WP_076138717.1|1199054_1200464_-|ferrous-iron-transporter-B
MESLPITKGPDALDSLLSTAKKLADGGAIRDEIVSGIYGVSAGICGDAVTYRDKKKLNNTYKLDNIVTSKIWGFPIMLAILGVVFWITIAGANYPSSWLASFFGFIEGYLTAGFEALHAPAWLHGVLVLGLYRGTSWVISVMLPPMMIFFPVFALLENFGYLPRVAFNMDRLFKKSGGHGKQALTMSMGFGCNAAAILSTRIIESPRERMLAILTNNFVPCNGRWPTLILLSSLFMAGAATTGALRTFTTASVLMGMVLIGIIVTLTVSWVMSKTALRGVPTHYTLELPPYRRPQIWKTILISSKDKSLNVLTRAIVVAAPAGIITWILGNLFIGGDSVLNHMAAFFDPFAHLLGMDGFIIMAFILGLPANEIVLPILLMGYMSSGAMVDIDSLGSIKDVFLSHGWTWLTALNMMLFSLLHYPCGTTLVNIYKETKSMKWAVLSAVIPLGIAIGVTFAVAQLARLFGWV
>NZ_LR698998.1|WP_038568974.1|1200441_1201173_-|50S-ribosome-binding-GTPase
MSQFTVAFAGNPNTGKSTLFNLLTGMRQHTGNWAGKTVITAEGEFKHNNHSYLAVDLPGTYSLYSNSADEEAARDYIIFEQPDVTLVVLDATSLERNLNLALQVLEITGRAVVCINLIDEARKLGIDINLKSISKRLGVPVVAISARNKIGIDALLDQVERVATGAFTAQPLRISYNEEIERGIAELTPLVEQTIGTKYPARWIALRLLDGDDSLLTSLKEHMKSKDLPEAKEVIGHGVTAYH
>NZ_LR698998.1|WP_036679839.1|1201169_1201424_-|ferrous-iron-transport-protein-A
MTGTTIPLSEAAKGSTLRISDIEVQGVLRRRLLDLGFVVGNIVEVLRRSPLGDPIAFRVSNTTIALRREESSLIFGELIGGVEA
>NZ_LR698998.1|WP_111502744.1|1201650_1202109_-|SRPBCC-domain-containing-protein
MKELHYEFYIGGTPEQVWETLISPEGTKQIYYGSVIQSTFKEGELLEYVGPGADGDETIHVYGTLLEFTPQKAFRFTHKVGPSYHKGTERYESRISWLLEPVVGTTKLTLIHDEWHPDDPSYAGSINAWWQVLSNIKTLVETGRTLDFGSWS
>NZ_LR698998.1|WP_076138719.1|1202214_1203171_-|YafY-family-transcriptional-regulator
MSKADHMLSILWMLKQRGRTAGELAEALEISVRSVYRYIDALCISGVPIIADSGPGGGYSLPEHFSEAPLFFDSDEQRSLLQAASFARGTGYPYVEALDQAIAKLKRYSNAQQLEQMERHESGIETIHSPAVPLSHLLQELELATANGHTLQMEYRKGNGETISSRAIDPYGLVLWKGQWYTVAYCHQRQEIRSFRVDRMTELHPTEALFARPADFSARDFLLKSLLPTPNTPEKLIAVVIAADEGILNDLCSHWLFGHTLVQRIDGQARFQVDETSLLTYAPYFLLPYGSTLRILEPLALKQKLSAIATDLAAYYKT
>NZ_LR698998.1|WP_111502746.1|1203318_1205265_-|ABC-transporter-permease
MNFPQFAFNNVRRNSRAYFAFFLSSAFMVMIFFSYSVFIYHPSITNIELGANSASGMQIASYIVFIFAFFFVLYSISAFLKMRNLEFGILMILGARPGQINKLILIENMLIGLLSIVTGVSFGMLLSKLFLLLSTTIMGMEPLPFYWPMKALMITSISFISLFLVISIFTLLFIRKHQVLELLKGNVKPKKEPRVSLLFSLFGLLLLTVGALAIRKQLSPSSLLVAAVTGIAGTYFFYSQLSVLGIRLLKLRRKRLWRGTNLLWISEMSYKIKDNARMLFLVTVVTSLACMASGILLSINQANSDLYKKSPFAVSYTIYDPKDEAPDLEPIHTKLKNAKVEYTENKVDLISASIQGIDKEKILGIDLISRSQFNQLGLQMDVSEVGPLSEKEAVLLLNPHMDSQNYAANRAIHLKVQKDEELMLKELRTPKVHPVDPMATSLLIVDDNLYHKISNSTEKYTRPYVKYLYKIPAWDGPTPNDSSAEAVVTRDLIQWNKAANKANHQYSSILGSRADSYLSTKQGAAMLSFIGIFIALIFSLSSASFLFFKLHTELNTDKQMYNALSKIGLSTKEMSASATKQISVLFYIPIIIATIQTLVVIRPILKQINITNVTVPVLTTSAVFLVVQTIYFLIARSRYIHSLKKIMV
>NZ_LR698998.1|WP_036679832.1|1205239_1206010_-|ABC-transporter-ATP-binding-protein
MNVLEVKGLHKVYPGKIVTQALTDIHLNIEKGEFVGIMGPSGSGKTTLLNMVSTIDQPSSGEVNINGSNPYLLNKKELAHFRRKQLGFVFQDFNLLETLTVAENIVLPLTLDNRKLSQMEILLQRVAERLNITDILSKRTYEISGGQRQRTAIARAIITSPSIILADEPTGALDSNSSRMVMESLEDINHKEGTTLMLVTHDPLAASYCNRIVFIKDGKLAAEIHRGDNRQAFFQKIIDTLSFWGGNSHELSSIRV
>NZ_LR698998.1|WP_111502748.1|1206249_1207248_-|sensor-histidine-kinase
MRLFWRDQISLILFYLLQMLLIPLLYWLSGESRPISIMLYGIALSTVVLLLYLGYRYVQHRRLYAALSEPMDMLQKHLVSLGDTPLSEAIHELLQLIDRQYQEQVNAHARQMDQHIVFMNRWVHQMKTPLSVIQLTLKDLEEEAAASIQEELERLRGGLEMVIYTSRLDQFENDFQVEPLLLRKTVSEAVAENRRLFIRRGIKVDVQVDANFAVYSDAKWLMFMLAQILTNAVNYTSGTGKTVTLSAQRVGTDTILDITDQGIGISPEDLKRVFNPYFTGDRGRHYHESTGMGLYLVREICSRLEHKVDIQSRLGEGTRVRLIFSNSDHLQK
>NZ_LR698998.1|WP_111502750.1|1207244_1207943_-|response-regulator-transcription-factor
METILIIEDDAKLASLLSTYLSKYGFRTIIVEDFNRVLETFNESSADLILLDVNLPKYDGFYWCRQIRSLSLCPILFISARDSGMDQVMALENGGDDYITKPFHYEVVLAKIRSHIRRAYGSYSQTQEEHKLQSGGLILYPERYMIQYGGHTSELTQKEAVLLEALLLKDGRVVNRERLLDLMWKDQHFIDDNTLNVYITRVRKKLKDLGLGDIVETVRGAGYRLNVSKDTP
>NZ_LR698998.1|WP_147614412.1|1208086_1208359_-|hypothetical-protein
MYIVQLSLDKPLELNLDCIDLDRLDFRSVSFGSISGRSVKVGSARAIQLELGQLKLGQLELGQLELGQLKLGQLELGQLKLGQLELGQLG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_5

1208883-1208964

Orphan

Consensus_repeat	Method
AAACTTACTCTAATTGCACTTTGTACA	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_LR698998_5

>merge|NZ_LR698998|5|1208883-1208964|CRISPRCasFinder
AAACTTACTCTAATTGCACTTTGTACATCCTCCGGAAGAAGATCGCGTACTCAACAAACTTACTCTAATTGCACTTTATACA

>NZ_LR698998|5|5|1208883-1208964|CRISPRCasFinder
AAACTTACTCTAATTGCACTTTGTACA	TCCTCCGGAAGAAGATCGCGTACTCAAC
AAACTTACTCTAATTGCACTTTATACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_038568987.1\|1217826_1218609_-\|STM4013/SEN3800-family-hydrolase	unknown	unknown	gnl\|CDD\|293767
NZ_LR698998.1\|WP_162636667.1\|1209286_1210219_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR698998.1\|WP_111502748.1\|1206249_1207248_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_LR698998.1\|WP_076137723.1\|1215581_1216448_-\|STM4011-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|225011
NZ_LR698998.1\|WP_036679832.1\|1205239_1206010_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_LR698998.1\|WP_038568983.1\|1211954_1212542_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_LR698998.1\|WP_076137725.1\|1213503_1214736_-\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_LR698998.1\|WP_076138719.1\|1202214_1203171_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_LR698998.1\|WP_038568974.1\|1200441_1201173_-\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|206667
NZ_LR698998.1\|WP_111502750.1\|1207244_1207943_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LR698998.1\|WP_111502758.1\|1216444_1217794_-\|STM4012-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|181292
NZ_LR698998.1\|WP_081387703.1\|1212619_1213438_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_LR698998.1\|WP_147614412.1\|1208086_1208359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036679839.1\|1201169_1201424_-\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_LR698998.1\|WP_111502746.1\|1203318_1205265_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225669
NZ_LR698998.1\|WP_076207696.1\|1218608_1219898_-\|STM4014-family-protein	unknown	unknown	gnl\|CDD\|223267
NZ_LR698998.1\|WP_076138717.1\|1199054_1200464_-\|ferrous-iron-transporter-B	unknown	unknown	gnl\|CDD\|223447
NZ_LR698998.1\|WP_111506106.1\|1210565_1211720_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_LR698998.1\|WP_111502744.1\|1201650_1202109_-\|SRPBCC-domain-containing-protein	unknown	unknown	gnl\|CDD\|176902
NZ_LR698998.1\|WP_111502756.1\|1214740_1215478_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_162636667.1\|1209286_1210219_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.55635e-06
NZ_LR698998.1\|WP_111502748.1\|1206249_1207248_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	1.6361e-44
NZ_LR698998.1\|WP_076137723.1\|1215581_1216448_-\|STM4011-family-radical-SAM-protein	gnl\|CDD\|225011	COG2100, COG2100, Predicted Fe-S oxidoreductase [General function prediction only].	0.000783239
NZ_LR698998.1\|WP_036679832.1\|1205239_1206010_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.20781e-104
NZ_LR698998.1\|WP_038568983.1\|1211954_1212542_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.30283e-54
NZ_LR698998.1\|WP_076137725.1\|1213503_1214736_-\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.59628e-107
NZ_LR698998.1\|WP_076138719.1\|1202214_1203171_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	5.97672e-44
NZ_LR698998.1\|WP_038568974.1\|1200441_1201173_-\|50S-ribosome-binding-GTPase	gnl\|CDD\|206667	cd01879, FeoB, Ferrous iron transport protein B (FeoB) family. Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.	1.49283e-81
NZ_LR698998.1\|WP_111502750.1\|1207244_1207943_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.93027e-72
NZ_LR698998.1\|WP_111502758.1\|1216444_1217794_-\|STM4012-family-radical-SAM-protein	gnl\|CDD\|181292	PRK08208, PRK08208, coproporphyrinogen III oxidase family protein.	0
NZ_LR698998.1\|WP_081387703.1\|1212619_1213438_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.46801e-47
NZ_LR698998.1\|WP_038568987.1\|1217826_1218609_-\|STM4013/SEN3800-family-hydrolase	gnl\|CDD\|293767	cd16148, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	1.48532e-13
NZ_LR698998.1\|WP_036679839.1\|1201169_1201424_-\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	3.78217e-18
NZ_LR698998.1\|WP_111502746.1\|1203318_1205265_-\|ABC-transporter-permease	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	5.36161e-09
NZ_LR698998.1\|WP_076207696.1\|1218608_1219898_-\|STM4014-family-protein	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	0.000556859
NZ_LR698998.1\|WP_076138717.1\|1199054_1200464_-\|ferrous-iron-transporter-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	1.13716e-77
NZ_LR698998.1\|WP_111506106.1\|1210565_1211720_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	4.18708e-37
NZ_LR698998.1\|WP_111502744.1\|1201650_1202109_-\|SRPBCC-domain-containing-protein	gnl\|CDD\|176902	cd08893, SRPBCC_CalC_Aha1-like_GntR-HTH, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins; some contain an N-terminal GntR family winged HTH DNA-binding domain. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. Some proteins in this subgroup contain an N-terminal winged helix-turn-helix DNA-binding domain found in the GntR family of proteins which include bacterial transcriptional regulators and their putative homologs from eukaryota and archaea.	2.36172e-36
NZ_LR698998.1\|WP_111502756.1\|1214740_1215478_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	4.31606e-116

>NZ_LR698998.1|WP_147614412.1|1208086_1208359_-|hypothetical-protein
MYIVQLSLDKPLELNLDCIDLDRLDFRSVSFGSISGRSVKVGSARAIQLELGQLKLGQLELGQLELGQLKLGQLELGQLKLGQLELGQLG
>NZ_LR698998.1|WP_111502750.1|1207244_1207943_-|response-regulator-transcription-factor
METILIIEDDAKLASLLSTYLSKYGFRTIIVEDFNRVLETFNESSADLILLDVNLPKYDGFYWCRQIRSLSLCPILFISARDSGMDQVMALENGGDDYITKPFHYEVVLAKIRSHIRRAYGSYSQTQEEHKLQSGGLILYPERYMIQYGGHTSELTQKEAVLLEALLLKDGRVVNRERLLDLMWKDQHFIDDNTLNVYITRVRKKLKDLGLGDIVETVRGAGYRLNVSKDTP
>NZ_LR698998.1|WP_111502748.1|1206249_1207248_-|sensor-histidine-kinase
MRLFWRDQISLILFYLLQMLLIPLLYWLSGESRPISIMLYGIALSTVVLLLYLGYRYVQHRRLYAALSEPMDMLQKHLVSLGDTPLSEAIHELLQLIDRQYQEQVNAHARQMDQHIVFMNRWVHQMKTPLSVIQLTLKDLEEEAAASIQEELERLRGGLEMVIYTSRLDQFENDFQVEPLLLRKTVSEAVAENRRLFIRRGIKVDVQVDANFAVYSDAKWLMFMLAQILTNAVNYTSGTGKTVTLSAQRVGTDTILDITDQGIGISPEDLKRVFNPYFTGDRGRHYHESTGMGLYLVREICSRLEHKVDIQSRLGEGTRVRLIFSNSDHLQK
>NZ_LR698998.1|WP_036679832.1|1205239_1206010_-|ABC-transporter-ATP-binding-protein
MNVLEVKGLHKVYPGKIVTQALTDIHLNIEKGEFVGIMGPSGSGKTTLLNMVSTIDQPSSGEVNINGSNPYLLNKKELAHFRRKQLGFVFQDFNLLETLTVAENIVLPLTLDNRKLSQMEILLQRVAERLNITDILSKRTYEISGGQRQRTAIARAIITSPSIILADEPTGALDSNSSRMVMESLEDINHKEGTTLMLVTHDPLAASYCNRIVFIKDGKLAAEIHRGDNRQAFFQKIIDTLSFWGGNSHELSSIRV
>NZ_LR698998.1|WP_111502746.1|1203318_1205265_-|ABC-transporter-permease
MNFPQFAFNNVRRNSRAYFAFFLSSAFMVMIFFSYSVFIYHPSITNIELGANSASGMQIASYIVFIFAFFFVLYSISAFLKMRNLEFGILMILGARPGQINKLILIENMLIGLLSIVTGVSFGMLLSKLFLLLSTTIMGMEPLPFYWPMKALMITSISFISLFLVISIFTLLFIRKHQVLELLKGNVKPKKEPRVSLLFSLFGLLLLTVGALAIRKQLSPSSLLVAAVTGIAGTYFFYSQLSVLGIRLLKLRRKRLWRGTNLLWISEMSYKIKDNARMLFLVTVVTSLACMASGILLSINQANSDLYKKSPFAVSYTIYDPKDEAPDLEPIHTKLKNAKVEYTENKVDLISASIQGIDKEKILGIDLISRSQFNQLGLQMDVSEVGPLSEKEAVLLLNPHMDSQNYAANRAIHLKVQKDEELMLKELRTPKVHPVDPMATSLLIVDDNLYHKISNSTEKYTRPYVKYLYKIPAWDGPTPNDSSAEAVVTRDLIQWNKAANKANHQYSSILGSRADSYLSTKQGAAMLSFIGIFIALIFSLSSASFLFFKLHTELNTDKQMYNALSKIGLSTKEMSASATKQISVLFYIPIIIATIQTLVVIRPILKQINITNVTVPVLTTSAVFLVVQTIYFLIARSRYIHSLKKIMV
>NZ_LR698998.1|WP_076138719.1|1202214_1203171_-|YafY-family-transcriptional-regulator
MSKADHMLSILWMLKQRGRTAGELAEALEISVRSVYRYIDALCISGVPIIADSGPGGGYSLPEHFSEAPLFFDSDEQRSLLQAASFARGTGYPYVEALDQAIAKLKRYSNAQQLEQMERHESGIETIHSPAVPLSHLLQELELATANGHTLQMEYRKGNGETISSRAIDPYGLVLWKGQWYTVAYCHQRQEIRSFRVDRMTELHPTEALFARPADFSARDFLLKSLLPTPNTPEKLIAVVIAADEGILNDLCSHWLFGHTLVQRIDGQARFQVDETSLLTYAPYFLLPYGSTLRILEPLALKQKLSAIATDLAAYYKT
>NZ_LR698998.1|WP_111502744.1|1201650_1202109_-|SRPBCC-domain-containing-protein
MKELHYEFYIGGTPEQVWETLISPEGTKQIYYGSVIQSTFKEGELLEYVGPGADGDETIHVYGTLLEFTPQKAFRFTHKVGPSYHKGTERYESRISWLLEPVVGTTKLTLIHDEWHPDDPSYAGSINAWWQVLSNIKTLVETGRTLDFGSWS
>NZ_LR698998.1|WP_036679839.1|1201169_1201424_-|ferrous-iron-transport-protein-A
MTGTTIPLSEAAKGSTLRISDIEVQGVLRRRLLDLGFVVGNIVEVLRRSPLGDPIAFRVSNTTIALRREESSLIFGELIGGVEA
>NZ_LR698998.1|WP_038568974.1|1200441_1201173_-|50S-ribosome-binding-GTPase
MSQFTVAFAGNPNTGKSTLFNLLTGMRQHTGNWAGKTVITAEGEFKHNNHSYLAVDLPGTYSLYSNSADEEAARDYIIFEQPDVTLVVLDATSLERNLNLALQVLEITGRAVVCINLIDEARKLGIDINLKSISKRLGVPVVAISARNKIGIDALLDQVERVATGAFTAQPLRISYNEEIERGIAELTPLVEQTIGTKYPARWIALRLLDGDDSLLTSLKEHMKSKDLPEAKEVIGHGVTAYH
>NZ_LR698998.1|WP_076138717.1|1199054_1200464_-|ferrous-iron-transporter-B
MESLPITKGPDALDSLLSTAKKLADGGAIRDEIVSGIYGVSAGICGDAVTYRDKKKLNNTYKLDNIVTSKIWGFPIMLAILGVVFWITIAGANYPSSWLASFFGFIEGYLTAGFEALHAPAWLHGVLVLGLYRGTSWVISVMLPPMMIFFPVFALLENFGYLPRVAFNMDRLFKKSGGHGKQALTMSMGFGCNAAAILSTRIIESPRERMLAILTNNFVPCNGRWPTLILLSSLFMAGAATTGALRTFTTASVLMGMVLIGIIVTLTVSWVMSKTALRGVPTHYTLELPPYRRPQIWKTILISSKDKSLNVLTRAIVVAAPAGIITWILGNLFIGGDSVLNHMAAFFDPFAHLLGMDGFIIMAFILGLPANEIVLPILLMGYMSSGAMVDIDSLGSIKDVFLSHGWTWLTALNMMLFSLLHYPCGTTLVNIYKETKSMKWAVLSAVIPLGIAIGVTFAVAQLARLFGWV
>NZ_LR698998.1|WP_162636667.1|1209286_1210219_+|GNAT-family-N-acetyltransferase
MNINFRSYRSEDLLKVRHFLIQSYSKLKTPNTWLIDRWEFVVFFQETRSGTLEQWEQKVGLWEYENGELAAVVCRDDGFYFQCAEMNPPEKLLEEMFAFAEQKAEEENGGYVELYVPIPENMASAAEVARKRGYHQTGGKESVNSLRLDKEFPVELPSGFRICSGDEIEVTAKALGHIMAFDYAETAEAELTLLHYGNMSNAPSYNPQLDLSVVNDAGEVVSFCNIFWDSSNRIGILEPVGTSINYRKLGLGRAVLHEGFNRLKQLGASKVYVGSMQPFYEKLGFTTEVWLQVWEYSGHTDLSCSGCPQL
>NZ_LR698998.1|WP_111506106.1|1210565_1211720_-|phosphodiester-glycosidase-family-protein
MKKLGSTLFLTFLLLIPLVATCPSTVGATPVPKNTVYVDKNNHSYIPLRLLNSFTGIQSVWNPNEKRISITNADTTITLTLGQTAALVNEKSVTLTDLAFSDNGTVYIPLSFISTTLGIQLTWDKEASSLTLKSNDIATTVPVQSGALIKADSPPVVSASKTFKVGGRSFKAQTVTVSLLHPKVKLDVVLAGNTVGKVEDLSSLAKRNNAVVAINGTFFDAYTKGAYKAPYGYIVSGGKMLKNSSGDRRTIFTYDSNHLATLIPGLDFTSRFASGSMEGALQAGPRLLVNGKVSLNVAAEGFKDPKILTGGGARSALGLTRDHKLILLTTGGATIPQLAEMMKQAGAYQAMNLDGGASSGLYYNGKYLTSPGRQISNAIVVKYQ
>NZ_LR698998.1|WP_038568983.1|1211954_1212542_+|histidine-phosphatase-family-protein
MTTIGLIRHGSTAWNKEGRVQGHTDNSLDAEGLQQAQLLAERLSTEQWDYIYSSDLLRARQTAEVIAERLGLEITGLAPGIREMYAGLIEGTTQQERIERWGTDWKTLDLGLETPEASELRGSEVIEEIAARHPGSHILIVSHGAILRSSLRRLLPELDGTVLLNNTSITRITKSESDGSWNCELYNCARHLEKE
>NZ_LR698998.1|WP_081387703.1|1212619_1213438_+|GGDEF-domain-containing-protein
MCELKVVEVQIYLQTLMSIIIAGVVGYLVLRFYRDVASKEPKQRAVYTGLSIITIVVGLWAMHQLGKKSLEETIEVNGGIFTPLLIYALTIAVLMFLLTRLNLVLAEREQLKELAYKDGLTGLLNKNGMDHFWDRCKVNEQLAVLFMDLNRFKSINDSLGHHVGDLLLQEVGGRLSQFSSKRKRHIFRIGGDEFVIVAKGCNQKEAEQLAVQILEKTTRHYQLGEHNLFVSASIGISISHGKVDHFRLLHEADTAMYTAKQLGTGRYSVYKN
>NZ_LR698998.1|WP_076137725.1|1213503_1214736_-|SLC45-family-MFS-transporter
MKKVWLLGFGFFSISITWSLYNAFVPFFLEKYVHSVALISFMMTIDNYFALFLQPWIGNRSDRTTSRFGRRMPYLMIGMPFAAVLTMLIPFHTGLFTLLLFMMLMNLAMSLYRSPTVALMPDITPEEQRTKANGLINFMGGFGSILAFGVGSILYKSNPALPFLVAGLITLLCLFIVSRFIKEKRDGVNKSPTLLSDTAESPSATVVNPSRISFRGQLDRTTVFLLAAIFFWFVAYQGVETLFTLYGKNHLGLSEQAASFSLTFFSLAFVLFAIPSGWLGGRFGKKKIIIVGVCGLMTVFALVGFAQDLLVLRALLLTGGIFWACININSYPYVVATGTEESIGTRTGMYYLVSSLAAISSPPLLGLMIDIFDYSILFYVAAISMAVALLCLFLMKGRKQVPHKFHTPGA
>NZ_LR698998.1|WP_111502756.1|1214740_1215478_-|glycerophosphodiester-phosphodiesterase
MNNIINFAHRGASAVCPENTMAAFRKGLELGATGIETDVQMTKDGGLVLIHDETLNRTTSGTGYVKDHTLAELLEVDAGSWFGPEFKGERLPLLEDLLDLLQGRDTILNIELKNGTFLYPGMEEKVIAAVRDFKMSDRVIFSSFNHYSLAYCQSLAPEIRTGILYGEGLYRPWDYAATLGATALHAYHFAVLPEFVEEAAKHGVAYHPWTVNDPERMKYLIEAGVSGIITDHPDLLAGLLADKGV
>NZ_LR698998.1|WP_076137723.1|1215581_1216448_-|STM4011-family-radical-SAM-protein
MNAVLYYRGSLTSCNYDCPYCPFGKTRDSAATLAKDRQGLEAFVAWASEQGAAGHRLSIFFNPYGEGLIHRWYKEAMIALSNMDHVEKVAIQTNLSANLDFISQLNRKKVAFWATYHPGQVREDKFLSQCLTLYENDVPFSVGSVGIRSAFSAIASLRSALPENVYLWVNAYKDKPDYYTAEDFAFLSEIDPHFSVNAMDYESLGQACNAGKDVFYVQGAGLVKRCYKDRGVIGNLYRDGLEGLSAVRSCRMKVCDCYIGYIHMPELKLRSIYEDGLLERIPYGAMNN
>NZ_LR698998.1|WP_111502758.1|1216444_1217794_-|STM4012-family-radical-SAM-protein
MTLSSFSLEELHKWKDSITAHPYRSYLYSYPHKTAYRDLQPPMPLETLWRDEPAESFFLYMHIPFCGARCGFCNLFTLPDKRANVHATYVDALERQAKQWAEFTRHRPYARFAIGGGTPTLLAADQLRRLFHIAVDTMGLDTNTASISVETSPETITEEKLNILKEYTVDRVSMGIQSFVAAESAAIYRPQNPDEVYRALELLGKYDFPILNLDLIYGLPGQTVDSWLYSLNQAISFEPEEIFIYPLYTREHTIVKPGDIQRQDDIRLDCYKAAGQLLRARGYRQYSMRRFAKEDAGTAKPILDYSCQEEGMVGLGCGARSYTRHVHYASRYGVSRKATESIIADYIATDRYDTADYGIVLSLEEQKRRFILKAILHSEGLKLEDYSQRFDQSLWSDYPELSNLLHSGLGQEEDGILRLTTEGMGYSDSIGDWFISGEIREQMERFVLP
>NZ_LR698998.1|WP_038568987.1|1217826_1218609_-|STM4013/SEN3800-family-hydrolase
MDMNTIVGTHDILMITLDTLRYDAATMEEANCPNLCGTGPWEKRHTPGSFTYAAHHAFFGGFLPTPATTDKTEHIRMFHSRNTGMKTHPHTWLFDTPDIVSGLAAEGYRTVCIGGVIFFTKKNPLARVLPSYFQQSYWRMTFGVTNPRSTEHQVNHALKLLKDTPSEQRLFMFLNVSAIHGPNHYFVPGAKKDSVDSQRAALRYVDGELGRLFDAFRERGNPVFCLAFSDHGTAYGEDGYQGHRLAHETVWNVPYREFIL
>NZ_LR698998.1|WP_076207696.1|1218608_1219898_-|STM4014-family-protein
MRPMIVIGIPGDKRTSGIQQARSDLGMPPAIILSYAEFLQGRSLSDLLKVQKQQLSSQPVVYNGIDLSAAPPLLRLESPGSSFEVERALIALGAPDAVDVDDSLHPYAERPDPRPLRVKVAHQLKEMQGVLHHPSQWFRGYCRMLARLQREVKEVCPGSLWLNDPADIAAMTDKRRAQQILSEAGITIPRPLGEEQQPTDYASLREMMISRRMHRVFIKLAFGSAASGVIAYQLHPVTGAEVALTTVGVENYITRPPIYYNSGKLRRYTDTATISGIINWIYRHGGYAEQWIPKIGHNGKAFDIRQLVVLREACHAIARVSSTPITNLHLRSQRMSPSEAGLSEFIQEQVRNTALQALAAFPRSGVAGIDVLISGGSQQCFVADVNPFGDLLYDVKYRGCSTYEWEMKVLTARDYITHPSTPLIKEGSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_6

1953706-1953965

Orphan

Consensus_repeat	Method
ACACCAGCGGCAACACCAGCAGCAAC	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_LR698998_6

>merge|NZ_LR698998|6|1953706-1953965|CRISPRCasFinder
ACACCTACACAGGCACCAGCAGTAACAACACCTATTTCACCGGTGTCCCCGGGGACACCAACTGGAACAGCAGCACCAATAGCGACACCAGCGGCAACACCAGCAGCAACGCCAACAGCAACACCAGCAGCAACGCCAACAGCAACACCAGCGGCAACGCCAGCAGCAACACCAGCGGCAACGCCAACAGCAACGCCAACAACGACACCAGCAGCAACGCCTACAGCGACAGCGACACCAACAGAAACACCGACAGTCAC

>NZ_LR698998|6|6|1953706-1953965|CRISPRCasFinder
ACACCTACACAGGCACCAGCAGTAAC	AACACCTATTTCACCGGTGTCCCCGGGG
ACACCAACTGGAACAGCAGCACCAAT	AGCGACACCAGCGGCA
ACACCAGCAGCAACGCCAACAGCAAC	ACCAGCAGCAACGCCAACAGCA
ACACCAGCGGCAACGCCAGCAGCAAC	ACCAGCGGCAACGCCA
ACAGCAACGCCAACAACGACACCAGC	AGCAACGCCTACAGCGACAGCG
ACACCAACAGAAACACCGACAGTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111503180.1\|1960432_1961368_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340423
NZ_LR698998.1\|WP_076103987.1\|1944947_1946165_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_LR698998.1\|WP_076135879.1\|1941198_1941663_+\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	unknown	unknown	gnl\|CDD\|349967
NZ_LR698998.1\|WP_111503178.1\|1958599_1959571_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_LR698998.1\|WP_076206307.1\|1963300_1964938_+\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_LR698998.1\|WP_076135870.1\|1961485_1962406_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213235
NZ_LR698998.1\|WP_036684443.1\|1938991_1939879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076135933.1\|1951074_1951965_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_LR698998.1\|WP_076135865.1\|1965002_1965854_-\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_LR698998.1\|WP_036684435.1\|1943454_1943862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076206319.1\|1957589_1958603_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	unknown	unknown	gnl\|CDD\|133022
NZ_LR698998.1\|WP_111503170.1\|1942393_1943458_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_LR698998.1\|WP_036684437.1\|1941789_1942044_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224913
NZ_LR698998.1\|WP_162636703.1\|1955399_1955561_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_155288207.1\|1959731_1960433_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|223816
NZ_LR698998.1\|WP_036684429.1\|1948586_1950482_+\|PrkA-family-serine-protein-kinase	unknown	unknown	gnl\|CDD\|225357
NZ_LR698998.1\|WP_036684441.1\|1939985_1941074_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_LR698998.1\|WP_036684433.1\|1944146_1944803_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR698998.1\|WP_076126455.1\|1962398_1963091_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378937
NZ_LR698998.1\|WP_111503174.1\|1955591_1956983_-\|SpoVR-family-protein	unknown	unknown	gnl\|CDD\|377285

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111503180.1\|1960432_1961368_+\|sensor-histidine-kinase	gnl\|CDD\|340423	cd16947, HATPase_YcbM-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).	4.01802e-61
NZ_LR698998.1\|WP_076103987.1\|1944947_1946165_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.15828e-100
NZ_LR698998.1\|WP_076135879.1\|1941198_1941663_+\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	7.51167e-89
NZ_LR698998.1\|WP_111503178.1\|1958599_1959571_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.26018e-45
NZ_LR698998.1\|WP_076206307.1\|1963300_1964938_+\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.17251e-83
NZ_LR698998.1\|WP_076135870.1\|1961485_1962406_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	9.82942e-98
NZ_LR698998.1\|WP_076135933.1\|1951074_1951965_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.93979e-27
NZ_LR698998.1\|WP_076135865.1\|1965002_1965854_-\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	8.49895e-106
NZ_LR698998.1\|WP_076206319.1\|1957589_1958603_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.18954e-33
NZ_LR698998.1\|WP_111503170.1\|1942393_1943458_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	1.78335e-35
NZ_LR698998.1\|WP_036684437.1\|1941789_1942044_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|224913	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription].	4.77527e-12
NZ_LR698998.1\|WP_076126455.1\|1962398_1963091_+\|ABC-transporter-permease	gnl\|CDD\|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	0.00063159
NZ_LR698998.1\|WP_155288207.1\|1959731_1960433_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.07002e-84
NZ_LR698998.1\|WP_036684429.1\|1948586_1950482_+\|PrkA-family-serine-protein-kinase	gnl\|CDD\|225357	COG2766, PrkA, Putative Ser protein kinase [Signal transduction mechanisms].	0
NZ_LR698998.1\|WP_036684441.1\|1939985_1941074_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_LR698998.1\|WP_036684433.1\|1944146_1944803_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.41386e-25
NZ_LR698998.1\|WP_111503174.1\|1955591_1956983_-\|SpoVR-family-protein	gnl\|CDD\|377285	pfam04293, SpoVR, SpoVR like protein. Bacillus subtilis stage V sporulation protein R is involved in spore cortex formation. Little is known about cortex biosynthesis, except that it depends on several sigma E controlled genes, including spoVR.	0

>NZ_LR698998.1|WP_076135933.1|1951074_1951965_+|AraC-family-transcriptional-regulator
MNYSKDIEKCVEYIEAHIKENITVEEIATEVGYSVYHFCRVFSLCKEMSVMEYVRSRKLSLASIELFAGKKIIDIALDYGFETQSGFTKAFRKTFGYSPTQYAARMDGFSKGNSIFDIGGYIMNPVFVRKPAFRVAGYGIQTNVAGSMYTKDIASFWSHYEGENLESKMYKILNPPKHGEVGLCIPSSDNGNATYLLGVIVEDYSKVEADMLTMDVPEAEYAVFTTPPVDTSTDTEQIEFAQVIKSSWKYIFEEWFKDSGYVYDETKLDFEFYDERCHSRPDTVMEIYVPVKKLTE
>NZ_LR698998.1|WP_036684429.1|1948586_1950482_+|PrkA-family-serine-protein-kinase
MDIFERIASYRAENDRLAWSGTFKQYIELLRKDPSPAKTAHSRVYDMIKSHGVEDINGRKRYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGLEQYSRTDAGAVYAIEGCPMHEDPLHLIPLELRPEIEKELGVRIEGNLCPSCQMRLRNDYAGDIEQVKVTRVILSEEERVGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFDGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEYKSFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMSHVHIAPHALRAAAIFSILTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRISSALIKGDLQCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKAFVYSFEESAKTLFENYLDNIEAFCNWSKIRDPLTDEEMEPDERLMRSIEEQIGISENAKKAFREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFTDLKDIVKITTSSKTPDESQLKRINEVCARLIDGHHYCPICANELLKYVGSLLNR
>NZ_LR698998.1|WP_076103987.1|1944947_1946165_+|PLP-dependent-aminotransferase-family-protein
MIYEFSARAHTLLSSSLLSIRTQTRRSSMISLAEELPAEELFPLSLLAEAASTVISADAGALQYGDPAGYGPLREWLAGDWLKEKGVNVVEGGVLLTTGSQQAIDLLSRVYIDPGDRVLVENPTSPGFLQTLRMQGAVIIPVQGDLDGLDPEHLRSQIELHKPKMLFATPSFTNPSGILWSLERRRAVLDLCIAYNILIVEDDSYGDLHFQKQGEQKAKRYPSLYALENISDGGHVLYIGSFSKTVAPALRTGWAAGSRVLIRMMSAAKQMADWQSSALNQRLLHHLLDVSAFDLREHIAQLNREYNTRLKLMVELLKRPAWKGSSYDLPSGGMFLWVAPPEGMDVMALLKCALGKGVAFLPGPLCSVDGVSNHLRLNFSHPGRDELLLGMNLMSEAVKEFTARS
>NZ_LR698998.1|WP_036684433.1|1944146_1944803_+|response-regulator-transcription-factor
MMKVWQVVIVGCHPTSMLGTKLILEEEEGLKVLGMYSTWDEGATIVREKNPELVLVDYHMPEGNIESVLLNMKKSSPNSHFVVMTDEDGRELLQPLVELGASGIFSKGASPRQLLQLILGLREGFLSMPLEWIEKGAWPISTFKGLDDVLQLTETEMFIMERIVQGITYDKIALEIAVSRRSIDNYLRKIYVKLDVSTRAQAIEKFALFSRQNRQIYA
>NZ_LR698998.1|WP_036684435.1|1943454_1943862_-|hypothetical-protein
MQPLAETSPVRSRSTTARNGPSVKWFLLFWIMMIGLGVYAVYSYTNHLKQQVLTELSTQSQQQLTVLKTDYEAKIAVLSEEVKELQNTVQSFNELLTFTKDNASAKTDNSNKLYTQLSEVSKQLEALKKEMDLIK
>NZ_LR698998.1|WP_111503170.1|1942393_1943458_-|phosphodiester-glycosidase-family-protein
MMTPVKRVNRFFMLLTAPFIGLFICMSWYRPPLQLDLDVGQFTPSAGPVNETASLKKELTLAEASAAYTIDAVSASAKLYKETTTTMNKLVETAKTQANRPELIYNRRISAKLGIPSEIVTSDRIRVELYRLNPGNYKAYALKIKLKDPTAMKMSLAETASGAETTMHAVQRNGAIAGINAGGFADQSGKRYPLSTTVVDGKYLYGFEPTYKDLSFVGLNKSGQLIGGKFYSRAQLDQLDPVFGATFVPVLLKNNIKTPIPEKWKTSPNRAPRTVIGKYKDDQILLFVADGYNEYGSSGAQLEEIQNKLSNMGLVDAYNLDGGGSSSLIFNGRVINKPSDGNLRAVPTNFLFFK
>NZ_LR698998.1|WP_036684437.1|1941789_1942044_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MKPAGVVRKVDQLGRIVLPKSLRKRYQMNEGDPVEILVQGDHIILERYRPKCVFCGSMDGVSEYKDRYICSACLSEMTQLPRHA
>NZ_LR698998.1|WP_076135879.1|1941198_1941663_+|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL
MALHIVLVEPEIPANTGNIARTCAATGTHLHLVRPLGFRTDDATLKRAGLDYWHAVTIEYHDSFAEVLEKYSEGRFFYATTKAEKRYSDFEFQDGDFFVFGKETKGLSAEILEAGKETKMRMPMSDAVRSLNLSNSAAIIVYEALRQLDFPNLI
>NZ_LR698998.1|WP_036684441.1|1939985_1941074_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MNKRAYNFNAGPAALPLTVLERAQAEFVDFRESGMSIMEMSHRGAIYESVHNEAQERLLSLLGNPKGYKVLFVQGGASTQFAMIPMNLISEGQVGSYVMTGSWADKAYKEAKLVGGAHVAASSEDKKFLAIPELSSIKAAENAAYLHVTSNETIEGTQYAEFPDAGSIPLIADMSSDILCRPIDVNQFGMIYAGAQKNLGPSGVTVVIAKEELLAESPSNIPTIMRYSTHYKNNSLYNTPPSFSVYMVNEVLKWIEEQGGLAGIHSKNLEKSGLLYDHIDGSDGFYRGVAEQGSRSIMNVTFRMQSEELEKQFVKAAELEGFVGLKGHRSVGGLRASIYNAVPYESVKALSDFMNHFRQTQG
>NZ_LR698998.1|WP_036684443.1|1938991_1939879_+|hypothetical-protein
MGCRLSNGILTVDIADIGEYKGTRFDWTGFITQVTLEEGKHTFCVPESLKPGEGTGGKGLCNEFGISRAIGYDEAPIGGWFPKIGVGLLQKGNSPLYSFNEEFPLTSFSKDVEAGNDAVTYTIHPMESNGYAVQLTKTISLQGDQLTIAYELHNKGQKPFHTEEYIHNFIGIDGLNIGQDFELRLPRELKVVEPESSYTKELLEVSGNTLTWSKEPDKPFYCKLSGWEGQENEFTWELVHKPSGTGVRESGDFPVERMALWGEGHVVSPEVFVNISLLPRQSKSWRRSYRFFTAK
>NZ_LR698998.1|WP_162636703.1|1955399_1955561_+|hypothetical-protein
MIREARADDWKDIAELLEQLGYPNPEMFMQEKIEKLILHPLILAKAKSGRPGC
>NZ_LR698998.1|WP_111503174.1|1955591_1956983_-|SpoVR-family-protein
MPSEEINALERAIAEITEIATGFGLDFYPMRYEICPADIIYTFGAYGMPTRFGHWSFGKTFHKMKSQYDFGLSKIYELVINSNPCYAFLLDGNSLIQNKLIVAHVLAHCDFFKNNMRFSMSNRDMVESMSATADRIAGYSVTYGTDAVESFIDSVLAIQEHIDPSLIQPRKLGKTHLLEAKMKELKDATPGGSKSSNPYDELWNLDKSNTGPQEAPSGNRAFPPEPEKDMVWFIQQYSTVLEDWQRDIMTMLHDEMLYFWPQMETKIMNEGWASYWHQRIVRELDLTEEETVEYAKLNSSVVQPSRQSLNPYYLGLKIFEDIERRWDREKIFEVRELESDTSFIRSYLSKELVNDLDLYVFEKKGPEWKITDKAWENVRDQLVLARVNGGSPYLVIEDADFEKNGELFITHRYESIELDLKYLERTLPHIYSLWGRTVHLQTVVEDKKARFSYDGKKVQRKFI
>NZ_LR698998.1|WP_076206319.1|1957589_1958603_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein
MTILIPAYEPDERLLDLILQLHNFQLEPIVLVDDGSGPHYHGIFDMAEAFGCTVLTHEVNLGKGRALKTGFQYIQEAGLPDYVVCADSDGQHLPYDINRIVESLQNQTTPGIVLGSRRFTGTIPLRSRFGNSVTRTVFSLTTGTKIYDTQTGLRGYPLPMLDWLCQIPGERFEYEMNMLLTAHKEGYTITEEYIDTVYLDDNKSSHFRPLMDSFRIYLPILMFSTSSLLSALLDFTLLFLFQSLSHNLFLSVAAARLCSSVFNYSMNRKYVFTGGKRSKIQKSLPKYFALVILVLLFNYGLLYFYNEKLIIPLVAAKLLTEASIFLFSYWAQRRFVY
>NZ_LR698998.1|WP_111503178.1|1958599_1959571_-|phosphodiester-glycosidase-family-protein
MLNKRSKQAWSFKRKLLIVMIIVLLLLGTVIYSLADRYLIEHVEVVVAEDAATTSSSGATAVTAAEVNATSDDWNYSSDDIQIQIDQVQTGSGSDQITYFVADVVFKEASSLRTAFADNSFGTNITEDTSDIASANNAIFAINGDYYGFRNDGVIIRNGTVYRDDPVRDAMALFDDGTMQTYNEEEISSSELLARGATDTLSFGPILIQDGEIASDFSNVKIDTNFGNHSIQNANPRTAVGMIAPNHYVFVVVDGRNEGYSRGMTLTELADVMSDLGATEAYNLDGGGSSTMYFMGRVVNNPQGKNKERGVSDILYIKEGATS
>NZ_LR698998.1|WP_155288207.1|1959731_1960433_+|winged-helix-turn-helix-domain-containing-protein
MLIEDDEAISEMVRSYLVKEGYEIEAVFDGEVAERTFRTGGPFDLVLLDLMLPKRSGTDILQTIRAGSLVPVLIMSAKDSDVDKALGLGFGADDYITKPFSMIELAARVKAAIRRAGYASPSIQVEDQAPVKQMISIGRLTVDLDNFSALKNGEEVKLTSKEFHILKLFVTHPGRVFTKAQIYASVWEDDYFGDENVINVHMRRLREKIEDDPSHPEYIKTLWGIGYKLGEQL
>NZ_LR698998.1|WP_111503180.1|1960432_1961368_+|sensor-histidine-kinase
MIAVLGVVIVLLLAVIVWQYQNSLKASNDLRYMHDKLSSIMEEGSHERLLLFSGNLGLQSVLIDLNRLLDINHKGSIERVRLEKSMRNMLSNISHDLKTPLTVVLGYIETIQQDEHLPAGERERMMKMIHQKANEVIQLMNKFFDLSKLESGDREIALSRVEAGEVCRRNILSFYDILSAKGSEVEIEIPDEAVYFMGNEEALDRILSNLLSNAISYGDAGGVLGLKLYSDENKVYIEVWDRGKGISEVHQDKVFERLYTLEDSRNRAYQGSGLGLTITKRLTEQMNGTITLVSQPYVRTVFTLTFRRLRF
>NZ_LR698998.1|WP_076135870.1|1961485_1962406_+|ABC-transporter-ATP-binding-protein
MTTILRTRNLTKTYQGKEVVSNVNMNIKQGEIYGFLGPNGAGKTTVMKMVTNLVKPTSGEIEFFNEKMTEHSYEMLKRMGCIIEYPVFYDKLTAKENLILHGEYMGYYDPQAIGEALELVKLTGVDKKPVKQFSLGMKQRLGIARAFMTKPELLILDEPINGLDPVGIKEMREVFRMLSREYGMTLLVSSHILGEIEQIADTIGVIRQGALVEEVAMDSIRGQNTEYIEVVTNEINKAVYVLEHKLGLINFKVLDHITVRIYDGGISQRDLNKALVLADVEIESISKKQHTLEDHFLQLIGGEGIA
>NZ_LR698998.1|WP_076126455.1|1962398_1963091_+|ABC-transporter-permease
MLKLISLEIRKNKLKTLLTGAAIVNLAILAFMIMVLFVDQNESEPSFASYAELFEGVFVFVKAAYIIFASVIISKLVIDEYKNNTITLLFMYPISRKKLMTAKILIVFAFTFVAIIVADIVVGAILIGFNSFAGLIPGELTLHVITSELIKLGANAFYAAGIALIPLYFGMKKKSVPATIVSAVLVTSLISGGFDQARLGNLAAVSISLGLLGAGIAYMAIRNIEHKDIA
>NZ_LR698998.1|WP_076206307.1|1963300_1964938_+|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator
MDKDWTSILRRLLSEESAYKSLYDQHPDLIFVLDRQGRCVGTNRTFHLGLNAEAKLQNTSPISAKRKNLGNIASFEAALQGNSSSFELQDLENPKKGSDCVGVKLLPIRTEEGIAGVFAITQVANGSALLHAELLQDWLDELADNLDPELPITGEVEISSKDSSIVAVKDQQSSLILNSVSAGIFVLDTTGRALFINREAADMLGYQPTELMGLKLMDYIHHIQGDGSRYSTPDCQISLTIEDGIIRKKDDEIFWRKDGTSFFVNYRVAPLIDEGVIAGAVIAFSDITNEREIIRAKESAEQAAQAKSDFLMMMSHEIRTPMNGMIGMADLLLDTELGEEQRGYAEILRSSSYTLLQILNDILDFSKMEAGKMSLQSEKFDLREMISDVIDLFAPKAEEKKLALRWWMDTSVPTIIIADPIRLRQIVVNLVGNALKFTERGSVTLSVKNIPLSDEQEFLLEFSVRDTGVGIAGNKLNLLFQSFSQLHPSINRKYGGTGLGLAICKQLVELMGGTIFVESEENQGSTFRFMLPCRAEDIELEVTSN
>NZ_LR698998.1|WP_076135865.1|1965002_1965854_-|DegV-family-protein
MSTVKIFSDSTSDLPQKWKDTYDIGIVPLYVVFEEGTYKDGEDITPEEVYRRVAASGVLPKTAAPSPADFIAAFQPVISSGQDIVYISLSSSLSSTYQNALLAAGEFPEGRVQVIDSQTLCGGIALLVMKAVRAAEKGHSAVDIAAMLEHSRSLVETEFVVDTLDYLYMGGRCSGMQNFIGSLLKIRPVLRLVDGSIIPTSKIRGKKEKAVEQMLQNALVHVDRMDNELLIVVHTLAEEDALYLEAALREKTQVNEIAILHAGCVIGSHCGPHTVGLMYMLQD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_7

1983662-1983748

Orphan

Consensus_repeat	Method
AAGTTTTGTTAGCGTTACTTCCTCGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_7

>merge|NZ_LR698998|7|1983662-1983748|CRISPRCasFinder
AAGTTTTGTTAGCGTTACTTCCTCGAACACTTCGGCAAAACCACCTCGAAAGCATACGCTAAGTTTTGTTAGCGCTACTTCCTCGAA

>NZ_LR698998|7|7|1983662-1983748|CRISPRCasFinder
AAGTTTTGTTAGCGTTACTTCCTCGAA	CACTTCGGCAAAACCACCTCGAAAGCATACGCT
AAGTTTTGTTAGCGCTACTTCCTCGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076208720.1\|1995477_1997163_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|273634
NZ_LR698998.1\|WP_076206307.1\|1963300_1964938_+\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_LR698998.1\|WP_111503192.1\|1984466_1985798_+\|maltose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270304
NZ_LR698998.1\|WP_081389020.1\|1988155_1990210_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_LR698998.1\|WP_076135851.1\|2004015_2004660_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_LR698998.1\|WP_111503186.1\|1971422_1972079_-\|beta-phosphoglucomutase	unknown	unknown	gnl\|CDD\|213672
NZ_LR698998.1\|WP_036684375.1\|1985905_1987219_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_LR698998.1\|WP_036684372.1\|1987215_1988058_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226354
NZ_LR698998.1\|WP_076135865.1\|1965002_1965854_-\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_LR698998.1\|WP_076135858.1\|1981901_1983647_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477
NZ_LR698998.1\|WP_170914210.1\|1966005_1966869_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226231
NZ_LR698998.1\|WP_111503190.1\|1974034_1981738_+\|pullulanase	unknown	unknown	gnl\|CDD\|273973
NZ_LR698998.1\|WP_076126466.1\|1972301_1973348_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_LR698998.1\|WP_076126455.1\|1962398_1963091_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378937
NZ_LR698998.1\|WP_111503194.1\|1990366_1991299_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_LR698998.1\|WP_111503198.1\|1997159_2003897_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|273634
NZ_LR698998.1\|WP_111503196.1\|1991417_1992923_+\|alpha-glucosidase/alpha-galactosidase	unknown	unknown	gnl\|CDD\|185035
NZ_LR698998.1\|WP_036684553.1\|1994140_1995304_-\|sporulation-protein-YhbH	unknown	unknown	gnl\|CDD\|274336
NZ_LR698998.1\|WP_111503184.1\|1968784_1971103_-\|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl\|CDD\|237517
NZ_LR698998.1\|WP_111503182.1\|1967013_1968696_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076208720.1\|1995477_1997163_-\|DUF11-domain-containing-protein	gnl\|CDD\|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	1.21841e-08
NZ_LR698998.1\|WP_076206307.1\|1963300_1964938_+\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.17251e-83
NZ_LR698998.1\|WP_111503192.1\|1984466_1985798_+\|maltose-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270304	cd13586, PBP2_Maltose_binding_like, The periplasmic-binding component of ABC transport systems specific for maltose and related polysaccharides; possess type 2 periplasmic binding fold. This subfamily represents the periplasmic binding component of ABC transport systems involved in uptake of polysaccharides including maltose, maltodextrin, and cyclodextrin. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.10381e-126
NZ_LR698998.1\|WP_081389020.1\|1988155_1990210_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.92036e-42
NZ_LR698998.1\|WP_076135851.1\|2004015_2004660_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	5.29523e-09
NZ_LR698998.1\|WP_111503186.1\|1971422_1972079_-\|beta-phosphoglucomutase	gnl\|CDD\|213672	TIGR01990, bPGM, beta-phosphoglucomutase. This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	5.46853e-82
NZ_LR698998.1\|WP_036684375.1\|1985905_1987219_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	5.92789e-66
NZ_LR698998.1\|WP_036684372.1\|1987215_1988058_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226354	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].	5.16339e-109
NZ_LR698998.1\|WP_076135865.1\|1965002_1965854_-\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	8.49895e-106
NZ_LR698998.1\|WP_076135858.1\|1981901_1983647_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_LR698998.1\|WP_170914210.1\|1966005_1966869_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	7.67211e-43
NZ_LR698998.1\|WP_111503190.1\|1974034_1981738_+\|pullulanase	gnl\|CDD\|273973	TIGR02102, alkaline_amylopullulanase, pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae () and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (.	0
NZ_LR698998.1\|WP_076126466.1\|1972301_1973348_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.85659e-123
NZ_LR698998.1\|WP_076126455.1\|1962398_1963091_+\|ABC-transporter-permease	gnl\|CDD\|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	0.00063159
NZ_LR698998.1\|WP_111503194.1\|1990366_1991299_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.75727e-29
NZ_LR698998.1\|WP_111503198.1\|1997159_2003897_-\|DUF11-domain-containing-protein	gnl\|CDD\|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	1.75062e-08
NZ_LR698998.1\|WP_111503196.1\|1991417_1992923_+\|alpha-glucosidase/alpha-galactosidase	gnl\|CDD\|185035	PRK15076, PRK15076, alpha-galactosidase; Provisional.	0
NZ_LR698998.1\|WP_036684553.1\|1994140_1995304_-\|sporulation-protein-YhbH	gnl\|CDD\|274336	TIGR02877, Stress_response_UPF0229_protein_YhbH, sporulation protein YhbH. This protein family, typified by YhbH in Bacillus subtilis, is found in nearly every endospore-forming bacterium and in no other genome (but note that the trusted cutoff score is set high to exclude a single high-scoring sequence from Nitrosococcus oceani ATCC 19707, which is classified in the Gammaproteobacteria). The gene in Bacillus subtilis was shown to be in the regulon of the sporulation sigma factor, sigma-E, and its mutation was shown to create a sporulation defect. [Cellular processes, Sporulation and germination].	0
NZ_LR698998.1\|WP_111503184.1\|1968784_1971103_-\|glycoside-hydrolase-family-65-protein	gnl\|CDD\|237517	PRK13807, PRK13807, maltose phosphorylase; Provisional.	0
NZ_LR698998.1\|WP_111503182.1\|1967013_1968696_-\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_LR698998.1|WP_076135858.1|1981901_1983647_-|alpha-glycosidase
MLLEAVYHRPRLNWSYAYNESTIHLRLRAKKGDLTEVFAFAGDKYAWDTTKELIPMTLFTSDAMFDYWECASVPLYRRLKYGFLLQKDNERIWMTESDFQTVRPENPNKLFEFPFINRVDVFAPPAWVKDAVFYQIFPERFANGDPSLDPENVQPWGSEPTPTNFFGGDLQGVIDHLDHLNELGITAIYFTPIFDATTNHKYDTEDYMKVDPHFGDIETLKKLVDSCHKRGIRVLLDAVFNHSGKTFAPFVDVQEKGEASAFKDWFHIRKFPLQIENGVPTYDTFAFEPLMPKLNTEHPEVKQYLLKVAEYWIKEVGIDGWRLDVANEVDHDFWREFRKVVKRANPEAYILGEIWHESAPWLEGDKFDAVMNYPFTDAVLDFFVHGTLDAEGFANSIGKQLSRYPLQASEVAFNLLDSHDTPRLLTLAAGDKNKMRLAALFQFTFMGTPCIYYGDEIGMDGEGDPGCRKCMEWNPEKQDRELFEFYRQLIQIRNDHPALRTGTFTFLEAGQQGSKLAYERRLDLQTIVVLINSEETAQTFRIDVDERDWENLFTGETLRTERSKLIVKMPAYGFAILKAII
>NZ_LR698998.1|WP_111503190.1|1974034_1981738_+|pullulanase
MKITLWGKRAFAIFMIIALVFSGLGLHPVNVTAATTKVVLVGDLQSKFTSTGAETPGKDWDETSVVTQMTYSDNGLYSFTGTLPAGEYNYKVTLNDLWDENYGFTSYTNPQGTNDGENIHIKLETETAVTFYYNDLTHKIADSTYYTPIASAKLPRLTGNLPAEALSTLSDPDFDDVYSTVATLPKGDYTYQVSVPGDGEAGDQLYPETANKLSLLSDLPVTFKFNPLDGSVTAEYKIPSEPVEVTPVPAGHIRIHYNRTAGDYENQGLWTWDDVQSPSANWPTGATSFPEGQIDSYGAYVDVPVKDGAKKISFLVVNRVTQAKDEGDKLFAINTPETNEIWIKQGSNDVTPYEPVALAPNTVRIHYMRADTNHDQYGLWLWDDVVAQSENWPSGATPFVADQTDRYGAYVDVPLIENAKKIGFIVMKPSNGDKDGDNKTFSLLDRYNQLWVKEGDNNVYVSPFGETPIGLVSAEVLSTSKILLGFTLTDGLDPAALKTAITVKDKEGAAIPITAVTLTSKTSIEVDTEAFDLEKVPLSVTYSGKTVSAASGWRMLDEMYNYTGDDLGATYNADKTATLKLWAPKASSVVVNLYDKNDSNVQVGSVALTLGEHGVWSVQLKPADLTGTTTNDVRGYFYQYEVTNDGVTHKVLDPYAKSMAVFTVDTTGAAGAGGDTVGKAAIVDLSQTNPDTFGYADIKGYEKREDAIIYEVHVRDFTSDVSIEDSLSGERWGSYSAFEKKLDYIKSLGVTHIQLLPVMAWYYGDETKMGTREPDYSAKNNEYNWGYDPHSYFSPDGAYSQNPADPEERIKELKGLIDAVHEAGMGVVLDVVYTHMAKKEFLNDIVPNYYAFQDANGNFIGGFGNNLATNHKMAEKLMVDSVKYWFEEYKIDGMRWDMMGDATADAVQHAYDAAAAVNPKALFIGEGWRTFGGAAADPSLAGQGADQDWMDKTDSVGVFSDEFRNELKSGYGSEGQPRFITGGARPIATILDNIKAQPSNTPADDPGDIVPYIEAHDNLTLHDVIAQSIKKDPDIAENELEIQQRIRLGNMLVLTSQGTAFIHAGQEYGRTKQWKGTTDPEDKFTEMFDNNNQSFGYFIHDSYDSSDAVNMFDWAKATDESKFPVQNTTRKYTSGLMELRKSTDAFRLGDKDLVDSNINLIPAPEMKDNDLVIGYSNKATDGTGIYYVFMNGDSTTRKLTLSEDLTGGQVLVDNDEAGVTAIPAAQQTGFVLTANSITLEPLTAVIIQKEAAPVTLTSLETDSASYTLAAGNTHQTAVFAKYDDNSRSNVTKKATYLSNKPEVATVTDKGLVKAVGLGTATLTITYEGISTTVTVKVTDKRYVQFTYTRSDKDYKDWNIWVWNTGAKNDQIDFTTFKNGTASVLIEVAENATSVGFVLRKGTDWNTGKQDYPDDRVIPLTPGEPFTKVYVTSMVKELDIKPSISGPILKDGTITFRYRDDALFRNGNMDAITAAKVKVNGTSYPMIYDPANEWFTYTLADLKEGMYKYTFLITKDGVTTEITDPKNTVNDESVIDYHQPVVTITTSVSPEAVTSNQNAVVTIHASSSEEVTYSEAYMDLTNLGGPSKVKLDTELLKQTVAVEDTVSAGIKDIPITLVDQYGNAHKEKATLEVKARTYTGDKLDFDWDEARIYFALTDRFKDGDPTNNENVNKDHLEAYHGGDFRGMIDNLDYLQELGINTLWITPIVDNIDFNKGVDFGSEQYGYHGYWAKDFTKLDEHLGDMATFKELIEKAHDKGIKIMVDVVLNHTGYGLKAEDTYPTITAEDKARFEGMLRTDGVSADTDPIKGELAFLPDFKTEDPAVREKIIAWQTGWLDNARTERGDTIDYFRVDTVKHVDDTTWKAFKNALTAMDPNFKMTGEYFGGTIDNNGGMLETSQMDGLLDFGFKDAARDFANGKVNSVDAYLQERELKIDNTKMMAQFLSSHDENGFLSDYVGGDKGKLKIAAALQITAKGQPVIYYGEELGNSGSNAGNMSEGQFSENRKDMPWDQLTAEKPLHDHYQKLLNIRAKYSKVYSKGARTKLAGSDDSGYLAFNKSYEDENVVTVINTKTSESSVTIPVPFAANSSVTDEYSGKTYMVSEDQKVNIDLPGRDDGGTVILAEVSDVIPTPTPTPTPTPTSTPTPTPTPTSTPTPTPTPTSTPTSAPEVTPSPEVTPTPEATAAPTSGVVVNPSPTPPADTQVVNEDSLKNGKEGKVQIDVATGKTAVRLPLQAAQILGTNDLVFRMGDLLVTIPSQLLSTMPSLASGMDGVGAQILLELNPLAQTAAKVIVDGLNKDSAHVSSLSDVFEFRLSVLMKDGTRIVIKQFDEPITISFKIKGQFNKDLIGIYYLSDNGGLEYVGGQLNGEVITAQVTHFSKYAVLEIDKSFKDVPATYWAFKAIQSLAAKQIVSGVTTSEFDPKSNISRAEFTALLVRALDLKAEGQDLFTDIRSDAWYASYVATATKLGIVSGRSNNIFAPNASITREEMAVMAIRALEVKSGKKLEPQLVGSTAFTDASSISKWAETYVKTAADFGLLQGRENNRFAPKAWMTRAESAQVIYTLLSK
>NZ_LR698998.1|WP_076126466.1|1972301_1973348_-|LacI-family-DNA-binding-transcriptional-regulator
MTVTIKDVAKKAGVSPSTVSRVLSNHPRISLETSRKVKAIMEDMGYTPNMMAKSLVSKTTNSICFSLPKPAEELFSNLFFMELIRGIVTQASRSGYDVLISSGANEKEELEAVSRLLKGRRVDGVILLYSRTDDAVIDFLESNDYPFVLVGRSDKYENILSVDNDNVMAAYDATNHLISMGHKRIGFVSGPPNLIVSRDRLAGYRKALQNSGLEMRDEWIVEGEFLQDSGYRAMSFFMNLPNRPTALVAVDDMVSFGILRGLNELKYKVPDDLAIVSFNNIPLSELSSPPISSIDIGIYHLGYTASQVLIQNIKSPDNGSGHTNRFVIPHRLIVRESSMHSLAKHETE
>NZ_LR698998.1|WP_111503186.1|1971422_1972079_-|beta-phosphoglucomutase
MSEIKACLFDLDGVIVDTAKYHFIAWKELADGLGFLFTEQDNERLKGVSRTASLNILLEIGGLTIDEEEKAKLAEQKNNRYVEYIAKMDSSEILPGALDFLKECRANGIKVALGSASKNAMTILNNTGLTPYFDAIIDGTHTSAAKPDPEVFLLGAKALDAAPEQCVVFEDAEAGIEAATRAGMFSVGIGSPETLSAANIVVPSLAHMSVSMLKESFA
>NZ_LR698998.1|WP_111503184.1|1968784_1971103_-|glycoside-hydrolase-family-65-protein
MKQYLTIDEWSIIEESFDPQTQEISESVFSLGNGFMGGRANFEEQYSGNSLQGSYMAGVYYPDKTRVGWWKNGYPEYFAKVLNSTNWIGINIDIEGTPLDLAKCTVSEFRRVLNMKEGTLSRSFTATLEDGKEVKVESIRFVSMTRQEIGAIRYSIIPVNFSGKITITPYLDGDVKNKDSNYDEKFWNEVEKQAGPDHGHLTLKTKKLDFHVTSAMAFDILVNGEKLTAEAEAIEQEKYVASKLDVTAQAGNQIVIYKYVANVTSRNHGLGQLVDAAQTALQAAKEAGFVTLLTEQIEAWREKWKESDIIIEGDVSAQQAIRFNIFQLNQTYNGEDDRLNIGPKGFTGEKYGGSTYWDTEAYCVPFYLSTADSSIARNLLIYRYKHLEKAKENARKLGFKKGALYPMVTMNGEECHNEWEITFEEIHRNGAIAYAIYNYVNYTGDKAYLGQYGLEVLVEISRFWEERVHYASRKDKYVMLGVTGPNEYENNVNNNWYTNRMASWTMEYTMEALAYLQENEPTRYAELVDKLGLQESETTKWKDIIAKMYYPADEELGIFLQQDGFLDKEIIQVKDLEREHLPLNQKWSWDRILRSCFIKQADVLQGLYFLGDRYDLDTKKRNFDFYEPITVHESSLSPCIHSILASELGYKDKAYEMYLRTSRLDLDNYNNDTEDGLHSTSMAGTWMSIVHGFGGLRVHDGRLTLSPSNPGHWTAYSFKIMFRGSRLKVSVTDAQITVTNETDIPASITIYDKEYTVNGLSSITADSNSVTV
>NZ_LR698998.1|WP_111503182.1|1967013_1968696_-|alpha-glucosidase
MNRTFWKEAVVYQIYPRSFQDSNGDGIGDLQGIISRLDYLQKLGVDVVWLSPVFKSPNDDNGYDISDYQDIMDEFGTLQDWEALLTGLHARGIKLMMDLVINHSSDEHPWFVESRSSKDNPYRDYYIWRPGGPDGERPNNWSSVFSGPAWELDETTGEYYLHLFSRKQPDLNWENPQLREELYKMITFWLDKGVDGLRMDVINMISKVEGLPSSHRDGLAPGELAWGGEYYMNGPRVHEFLHEMNDKVLSNYNIMTVGETPGATVEDAILYTDEERKELQMVFQFEHMDVDSGPDGKWDVAPWTLSKLRDILHKWQVGLADKGWNSLYLNNHDQPRMVSRFGDDGKYRVISAKMLATLLHTLKGAPYIYQGEEIGMTNVKFTAIEHYKDIEILNMYREKVTEGGADPNSVLNAIHIKGRDNARTPMQWDNSPNAGFTEGEPWLKVNPNYKEINVEQALADSDSIFYYYQRLLALRKKNPIMAYGEYKLLLPEHEDIYAYTRTLDDEKWLVLLNFNEVPQTVDLSAELSKAKELIIGNYPDEAPSRELLRPYEARVYRLKD
>NZ_LR698998.1|WP_170914210.1|1966005_1966869_-|AraC-family-transcriptional-regulator
MEWLIRMKEALDYMESKMEESVTIEEIAKVAYSSPFHFQRMFNMLTGVSIKDYIRKRRLTLAAQELAISKVKVLDVALKYGYDSPESFAKAFRKAHGITPSAARESGVQLKAFPRLSFHLSLKGDKEMDYRIEKRDAFNVIGLVEEMTTKDGENLRRIPQLWIEANENGTSDKLIELGGDKDLLGICSDMNHDKETFSYWIAVEATPETDAQGFASTTIPAASWAVFTSVGPMPDAIQQVWARIFQEWFPSTGYEHTGGPEFELYLPGRPDAEDYRCEIWIPVTKKE
>NZ_LR698998.1|WP_076135865.1|1965002_1965854_-|DegV-family-protein
MSTVKIFSDSTSDLPQKWKDTYDIGIVPLYVVFEEGTYKDGEDITPEEVYRRVAASGVLPKTAAPSPADFIAAFQPVISSGQDIVYISLSSSLSSTYQNALLAAGEFPEGRVQVIDSQTLCGGIALLVMKAVRAAEKGHSAVDIAAMLEHSRSLVETEFVVDTLDYLYMGGRCSGMQNFIGSLLKIRPVLRLVDGSIIPTSKIRGKKEKAVEQMLQNALVHVDRMDNELLIVVHTLAEEDALYLEAALREKTQVNEIAILHAGCVIGSHCGPHTVGLMYMLQD
>NZ_LR698998.1|WP_076206307.1|1963300_1964938_+|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator
MDKDWTSILRRLLSEESAYKSLYDQHPDLIFVLDRQGRCVGTNRTFHLGLNAEAKLQNTSPISAKRKNLGNIASFEAALQGNSSSFELQDLENPKKGSDCVGVKLLPIRTEEGIAGVFAITQVANGSALLHAELLQDWLDELADNLDPELPITGEVEISSKDSSIVAVKDQQSSLILNSVSAGIFVLDTTGRALFINREAADMLGYQPTELMGLKLMDYIHHIQGDGSRYSTPDCQISLTIEDGIIRKKDDEIFWRKDGTSFFVNYRVAPLIDEGVIAGAVIAFSDITNEREIIRAKESAEQAAQAKSDFLMMMSHEIRTPMNGMIGMADLLLDTELGEEQRGYAEILRSSSYTLLQILNDILDFSKMEAGKMSLQSEKFDLREMISDVIDLFAPKAEEKKLALRWWMDTSVPTIIIADPIRLRQIVVNLVGNALKFTERGSVTLSVKNIPLSDEQEFLLEFSVRDTGVGIAGNKLNLLFQSFSQLHPSINRKYGGTGLGLAICKQLVELMGGTIFVESEENQGSTFRFMLPCRAEDIELEVTSN
>NZ_LR698998.1|WP_076126455.1|1962398_1963091_+|ABC-transporter-permease
MLKLISLEIRKNKLKTLLTGAAIVNLAILAFMIMVLFVDQNESEPSFASYAELFEGVFVFVKAAYIIFASVIISKLVIDEYKNNTITLLFMYPISRKKLMTAKILIVFAFTFVAIIVADIVVGAILIGFNSFAGLIPGELTLHVITSELIKLGANAFYAAGIALIPLYFGMKKKSVPATIVSAVLVTSLISGGFDQARLGNLAAVSISLGLLGAGIAYMAIRNIEHKDIA
>NZ_LR698998.1|WP_111503192.1|1984466_1985798_+|maltose-ABC-transporter-substrate-binding-protein
MKLKKMMVITAAFSMALSVTACGSNNNSANNGGNNAAKATNNATTETAAPESTDAAATDELVPEDGATLVVWESKEERPFADEIAKQFTAKYNVPVKVEELAPPDQVTKLTQDGPSGLAADVILIPHDNLGKAASASLVLPNDVFGEETKANNTEASIIGSSYEGELYGYPRAAETYALFYNKSLVKEAPKSFDDVLAFSKTFTDKSKNRYGIMWEVGNLYFNYMFIASDGGYLFGKDGTDKDDIGLANDGAIAGLKEFVKLKEALPIKSGDINSDIKRSLFNSGDVAMDITGPWELGGYKEALGDNLGIAPIPTVNGKTAITFSGIKIFAVNSFTQYPNAAKLYANFASSKDAQLLLNKTIGSVPTNNEALLDPQISSDPYVSVFAEQAKNSQPMPSIPEMGNVWSPVNAALPEIWDKNGDPKAAMDKAVQQIKDLNNSSSQ
>NZ_LR698998.1|WP_036684375.1|1985905_1987219_+|sugar-ABC-transporter-permease
MQRHRTRAAILSTIFMGLGQIYNRQFVKGILYLAVEAVAVFYFIENLANSLWGIVTLGENPSRLVKVKGIAKMVTGDHSIYIMIQSLITILILILLIIAWYLNIRDAYKIGEKRDNGLQANTFKQSVRYILDYKFAQAFLVLPGIGVLFFTIMPIIFMILLAFTNYSAPDHLPPAKLVDWVGFQTFRNLLVLKTWSHTFYGVLTWTIIWAVLSTITTYFGGLLVALLVSQKGIRFKGMWRVILIVPYAVPQLISLLLMRNLFNGQFGPINQYMGYFGLDGLPWLTDPFWAKVTVIIVNMWVGIPVSMLLIMGVLTTIPRDMYEAAEVDGASGYQKFRIVTLPMVLFSTAPTLITQFAGNINNFNAIFLLTGGSPVNGDYQYAGSTDLLVTWLYKLTLDQNKNNMASAIGIIIFIIVASFSLYNYRRTKSFKEEDMIQ
>NZ_LR698998.1|WP_036684372.1|1987215_1988058_+|sugar-ABC-transporter-permease
MSRKVANIIRLAGSYIILIALSIAALYPALWILLASFRPGKSLYSKTFIPEQFTLSHYRELFTSPSYMFGTWYANTLKIAVFSMLIGVVLTLLTSYAVSRFRFKARKTALSTVLILGMFPGFMSMIAIYMLLKEFNLLDTHIALIIVYAAGAPLGGTFIAKGFLDTIPRSLDEAARIDGASNFGIFMRIILPLSRPMITYMALTQFVGPWVDFIFARLILRTKENWTVAVGMWDMVNTNQNTNFTLFSAGAVLISIPIMILFVFLQRLLVDGLTAGASKG
>NZ_LR698998.1|WP_081389020.1|1988155_1990210_+|methyl-accepting-chemotaxis-protein
MKKSWTLYFKSVGVKLFVILFSSIVLLSSVLGLTSYFAAKNIITNEVAAASTQSVVQAADKLDFVLAEYEALSRQFALDSVLKGDLEKINSGELTTVAKAGAEDRIRRKLDLVKGSDERMYGVRLVSKSLVESESYKSTGISGIRSDEGISARLEQIAAAKGEPVWFPVREKGFFDAYTEPSLTMGRLLRNLLHPEAEYYMLIEVKGKAMTEMLSNLQIGMTGEIRILSADGSIVYGADHAKLGQPSYIKVSEEQGKEQNHSFTAEDENGSPQLVVYQPLATAKWMLMGYAPVSDFTKSADKLLYITFSVVLAAALIALLIGYILVRLVGRPLGKLAVLMEEGERGNLQVRTHFKGKDEIGRLGHSFNKMMEQISLLARQSGKSADEVLLTSEQLVQASGTISLHAREVATATGEIAVGSASLAVEAERSYHNVEIIGSKMSEVTEINTVMDHSAERVIEVSNQGTELMKLLVEQSESTVEMINRIQDNSTKLRESTHLIRSILSPMIAVNKQTNILALNATIEAVRAGAAGRGFIVIADEIRQLANQSNESIQSVSKITEEIGLHIENTVKDINEAAPKFREQISSVRESSTIFASVKEEMEHFMRHISESSASVLELIEFQRQLGESMASVSSIVQQTTASTEEVASMSSQQFTVSEELVALSEKLEGLAADLKHSLVSFQV
>NZ_LR698998.1|WP_111503194.1|1990366_1991299_+|helix-turn-helix-transcriptional-regulator
MTNLSLSPSGSLFQQVLIEGDYSPHFFAYYYKQWNNYNMSYHQHNSTEIMYLISGSCIVDVRPSSGGEERVRLKRGELIILDANVPHRLIVEEGAPCRMLNVEFGFMEYRGVAPSIGKLAREEAALAEMLQLPFSSLVMPDPEEIYHVLKGLVLELDQSGGKGGSMVDLLFCELLLRLSRLRQEQLHTSQQPSQLYVRRSIEFLHQNYDQNIQVKDIAAAVNLHPGYLHRIFKSHTGRTLSDYLNMLRMEKAKMLLGQSDIPIAEIADYVGISSRQYFHLLFKKYADCTPVEFRNSIERHAWSYEEHDFQ
>NZ_LR698998.1|WP_111503196.1|1991417_1992923_+|alpha-glucosidase/alpha-galactosidase
MSFKVSFIGAGSIGFTRGLLRDLLTVPEFKNIEVSFMDINSHNLEMVTELCQRDIKENGLNIQIQATTDRREALKDAKYVFCTIRMGGLEAFATDVDIPLKYGVDQCVGDTLCAGGIMYGQRGIAEMLNICRDIREMAAPDVLLLNYSNPMAMLTWACNKYGGVRTIGLCHGVQHGHQQIADVYGLKKSEVDIICAGINHQTWYISASHEGKDLTGGLLEAFEKHPEFSRTEKVRIDMLRRFGYYSTESNGHLSEYVPWYRKRSDEIMDWIDLGSWINGQTGGYLRVCTEGRNWFETDFPNWMKDPALEYTKENRGEEHGSYIIEGLETGRVYRGHFNTVNNGVISNLPEDAIIEAPGYVDRNGISMPLVGELPLGPAAVCNVSISVQRLAVEAAVHGDDKLLRQAFMMDPLVGAVCNPKEIWQMVDEMLVAGEQWLPQYSEAIAKAKERLASGELIPTNANNEGAARLKVKTVDEMMQDREAANKNAGESDKGKDREKVH
>NZ_LR698998.1|WP_036684553.1|1994140_1995304_-|sporulation-protein-YhbH
MSQSSGPFSFVVSKEDWSLHRKGHQDQERHQQKVREAIKDNLPDLVTEENIILSGGKQIVKVPIRSLDEYRIIYNFRKQKHVGQGDGESQVGDVLGRDSQSAQPGKGEKAGDQPGQDTVEAEVNLEDLEDILFQDMELPHLKPKNKEEIEVKSIIFNDIRKKGMMSNIDKKRTLLENLRRNASSGNPGIHSISPDDLRYKTWDDIRTPHSNAVIIAMMDTSGSMGSFEKYCARSFFFWMTRFLRRQYEKVEIVFLAHHTEAKEVSEHDFFTRGESGGTICSSAYQRAIEIIDSRYPPAQYNIYPFHFSDGDNLTSDNERCVKLIGELLKRSNMFGYGEVNQYNRSSTLMSAYRHLKHEQFMHYVIKDKKEVYQALKTFFSPKGTVNS
>NZ_LR698998.1|WP_076208720.1|1995477_1997163_-|DUF11-domain-containing-protein
MIPGSRTQPVVTNQSMVLFNSAAGVDGIVYSNTVNTPVVGPVLSLLKSTDKLHASLGDTLVYTITASNNGNTDALLTVFDILPEGVSFISNSVLRDGVPLPGATPSSGIPLGSIAPQNQVSIAFQVVIISLPSSLVLQNKALGRFSFSTPEGRIVKGDLFSNSVQVSLRSYQLSTSLSASTPTSFIGDVVTYTLRLTNEGNSLLTQINAIISIPDGAVFIPGSVIAGGIYNPDSDPLQGILLGSLETNLSVDITFRVRVTEIPPSSSLTNSAVVTYSVDEDPITIESNNAVISLVQAGVTISKKVDHVTAAPGDNLRYELTVTNNGNLAVNAVLTDAIPSGTLFVWDSVLLNGVLQKGARPAEGIQLGTLRGGTTAVVVFQVSIPAAINIHEIAAVQNHASVQYTFVLPDGRTVRQTSRSNTVTTLVVTPVISLVVHAKPTIVEAGERVQCWISLTNNGNWPAEISLNRLTPEKCFLDPNSIVIDGVPNPQSSFTGTLPLGIVNAASMVNIHYFIQVSEQVMGRFLRGSVNAQYSFNMDGRNYSGESQSNSFVLTVDEISE
>NZ_LR698998.1|WP_111503198.1|1997159_2003897_-|DUF11-domain-containing-protein
MRIIPLVVRATINATGAITFTGNTLGLSRSDTIGVPGTLDSIGGFTTVNTSSTFGTYPSGTTSLYTSNSSAAILVLPSGSTVLYAELIWGGTYINGNVNLSSAINNPVSFITPAGTTFSVTPDSATSNVVDLGGGASAYVRSANVTSIIQQGGAGTYTTGGVVGTIVIPSDSTANHAGWTLGVIYQNTALPFRNMSLRAGAILVQATSAPVSTTITGFATPITGALGGRALFSAQEGDANRSGDQALFGPTSATLVALSGPNNFANNFFASQINNDAGNLNTTGTFGNRNQINGNPGTNIIGGRQGWDITNVDVSARLINNQSSAVLQLTTSGDAYVLNGNAIQVDINAPKINLTKSANVAGPIVGDTVTYTVTVSNTGTAGAASVVLSDALPAGSTFVTGSVVVAGVSKPTFDITAGISLGSLALSSSITVTYQAKVTSLPPSPQNIANTANAAFTFQSVAGGPIMTGVIPSNTVTLPVYSPVLNIVKSANTTNATVGDQITYTLQITNTGNIGAVTTLTDNIPSGSSYVAGSFTVNGNPVAGNPATGIAIGTVAAGGSSTVQFRVIVNSLPSPPQLVDQASAAYTFQVPDGRTVAGSASSNTLSIPVTIPNVTVVKSAGFADVTVGDILLYTSVISNNGIAAVTNVSLSDTIPAGTSLVPGSVTVAGVSQPSANPGTGISVGTIAPGSSVAVTFQVNVISLPSPAQLLNKSSASFSSGAFTGISVSNTTTTPVYQPVIQIAKSSNVSSATVGGNILYTLNVQNSGNIGAAVTLSDNIPSGSTFVSGSVTVNGVARPADSPLTGINLGTLASGAAVAVTFLVSVQSLPAPPVLNNQGSSSYTYQLPSGRSFSGTSLSNTLTIPVSAPNITLTKTANLTNVAVGENLTYSVVVSNPSSVTVTNVVVSDPIPTGGAFVAGSVTVNGSTVAAANPSTGIAIGSIAAGSSVTVSFRVNVASLPSPAQFTNRASASFTSGAFTGSSLSNTIVTPVFQPILSMVKSANAAQASVGGSLSYSILISNTGNIAATLLVTDILPPQAVFDTNSVIIGGTPLPGYNPATGIPVGPLAPGDSVTVSFLVTITALPPSQVLLNSASATYNFTLPDGRQLGGNVVSNTLSVPVSAPNVSVVKSVNAATAVTGDILTFTSVLTNNSIATVSNIILSDPLPENVAFIPGTVIVSGTTLPLAVPSAGIPIGSLSPGATATVTFEVRITMPIPSQINNQSSVSFTSGVFSGSSSSNITTTPVIQPQISLVKSAADGDGDFDALVVGDSVIYTVLVSNTGNLAANLTLTDNIPAGTVFVPNSVIVGGMPQPGSAPDTGIAVGNVAPGASIAVSFTVDIISLPTPQQISNQASASFTFTPPDGRPLSGTAVSNTVTLQVSAPNIVVTKSTTSTSVAVGETVTYNVNLTNNGIESVTSVLLNDPTPVGSTFVTGSVSVNGVPFPNLSPASGISIGTLAAGASALVTYSVTVTSVPPTASLINQASVTFTSGVISSSTFSNTVTVPVFQPNIAVVKSASTANATVGDAVSYKLTVSNTGNYAANLTLTDNIPAGTTFVPNSVLINGLPLAQADPSTGIAAGIIQPGGTTVVIFTVDITSLPSPQQLVNQGTAAYSFTLPDGRTLNGSALSNTVTIPVSSPNIAVVKTTTTTSTTVGDTITYSIALTNNGIATVNNVVFTDALPAGTTFVTGSVLVDGVPRTGVSPATGVTLGSIAPGVTVTVAFTVNVVSLPPTGLLNNQSTVSFTSGVVSNVAFSNIVTTPVYLPILAAAKSSNSVNATVGDTITYTINVTNTGNYGALATLSDTIPAGTTFIPNSVLIQGAPAPGADPAAGIPLGVISANGSLSVMFSVLITTLPASQQLLNQASVAFAYTLPDGRTFNNSINSNTTTISVSSPNVIVTKSSTATDAVVGDTITYNLTVTNSGIANISNVNLSDPIPAGSSFVTGSVTVDGTPRPSANPANGISLGTLAPGASFQVSFNTIVNVLPNPATLSNQASVSFTSGAFSGSSFSNTLVVPVYQPIIVVVKGADRTAATVGDTITYSLNVTNTGNLIANVVITDTIPNGAVFVPNSVLVNGVPQPGSDPSTGLSIGALAPGSTVTVTITLQVTIASLPSPQQLVNQATANFTFTPPDGRSLTGSSVSNVLIIPVSSPDVSVVKSTTSIDAVVGDIITYTIVVTNLGISPVNNVIMVDPIPAGSQFVTGSITVDGAPRPSGSPASGIAIGTIAAGASSTITFQVQVVAL
>NZ_LR698998.1|WP_076135851.1|2004015_2004660_-|methyltransferase-domain-containing-protein
MRIDIGCGSNKEAGYLGIDRIAGPVVDIVCDICQEIPLPDNSAEFVMASRVLPYVDNLFAAMAEIHRISIHKAVVCILAPYAHSFAHMSNPAFKQKFDEYTPRHFTGSFFQPPSGPVCPTIPDYPVPVPPFDYRLLRMELFYQHPYEDPLYETEELEILKTLQANVVHEIMYHFVVVKHNITDQELELMSRSHYPEPHVLVERRLKSQNRHFFL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_8

3026890-3026989

Orphan

Consensus_repeat	Method
GTAAAGGATGTAGTATAAGAGCAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_8

>merge|NZ_LR698998|8|3026890-3026989|CRISPRCasFinder
GTAAAGGATGTAGTATAAGAGCAAGGGCTGCTGGGTCCGAACGATCTATGGCGACGAAGATGTAATGAATGTGTAGTAAAGGATGTAGTATACGAGCAAG

>NZ_LR698998|8|8|3026890-3026989|CRISPRCasFinder
GTAAAGGATGTAGTATAAGAGCAAG	GGCTGCTGGGTCCGAACGATCTATGGCGACGAAGATGTAATGAATGTGTA
GTAAAGGATGTAGTATACGAGCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111503823.1\|3024820_3025297_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176908
NZ_LR698998.1\|WP_076104260.1\|3021951_3022905_+\|alpha-E-domain-containing-protein	unknown	unknown	gnl\|CDD\|377234
NZ_LR698998.1\|WP_076126126.1\|3022901_3023768_+\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
NZ_LR698998.1\|WP_076101782.1\|3012204_3013440_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452
NZ_LR698998.1\|WP_111503827.1\|3033559_3034615_+\|chorismate-synthase	unknown	unknown	gnl\|CDD\|376510
NZ_LR698998.1\|WP_111503825.1\|3028401_3030894_+\|ATP-dependent-helicase-HrpB	unknown	unknown	gnl\|CDD\|273901
NZ_LR698998.1\|WP_111503831.1\|3035667_3035862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111506253.1\|3032555_3033443_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_LR698998.1\|WP_111503835.1\|3036512_3037055_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR698998.1\|WP_076205837.1\|3030992_3031577_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_LR698998.1\|WP_038570606.1\|3013455_3014160_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_LR698998.1\|WP_076138629.1\|3018047_3019055_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_LR698998.1\|WP_111503829.1\|3034776_3035634_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_LR698998.1\|WP_111503819.1\|3019180_3020059_-\|DUF1835-domain-containing-protein	unknown	unknown	gnl\|CDD\|378075
NZ_LR698998.1\|WP_076135214.1\|3027839_3028262_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR698998.1\|WP_076135216.1\|3027302_3027701_+\|DUF1992-domain-containing-protein	unknown	unknown	gnl\|CDD\|378159
NZ_LR698998.1\|WP_036686502.1\|3020412_3021876_+\|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl\|CDD\|225190
NZ_LR698998.1\|WP_111503817.1\|3014441_3018011_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274008
NZ_LR698998.1\|WP_111503821.1\|3024019_3024829_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_LR698998.1\|WP_147614435.1\|3036266_3036530_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111503823.1\|3024820_3025297_-\|SRPBCC-family-protein	gnl\|CDD\|176908	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	1.17478e-37
NZ_LR698998.1\|WP_076104260.1\|3021951_3022905_+\|alpha-E-domain-containing-protein	gnl\|CDD\|377234	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif. An uncharacterized alpha helical domain containing a highly conserved ER motif and typically found as a tandem duplication. Contextual analysis suggests that it functions in a distinct peptide synthesis/modification system comprising of a transglutaminase, a peptidase of the NTN-hydrolase superfamily, an active and inactive circularly permuted ATP-grasp domains and a transglutaminase fused N-terminal to a circularly permuted COOH-NH2 ligase domain.	8.31181e-99
NZ_LR698998.1\|WP_076126126.1\|3022901_3023768_+\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	4.63119e-47
NZ_LR698998.1\|WP_076101782.1\|3012204_3013440_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_LR698998.1\|WP_111503827.1\|3033559_3034615_+\|chorismate-synthase	gnl\|CDD\|376510	pfam01264, Chorismate_synt, Chorismate synthase.	0
NZ_LR698998.1\|WP_111503825.1\|3028401_3030894_+\|ATP-dependent-helicase-HrpB	gnl\|CDD\|273901	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB. This model represents HrpB, one of two related but uncharacterized DEAH-box ATP-dependent helicases in many Proteobacteria, but also in a few species of other lineages. The member from Rhizobium meliloti has been designated HelO. HrpB is typically about 800 residues in length, while its paralog HrpA (TIGR01967), also uncharacterized, is about 1300 amino acids long. Related characterized eukarotic proteins are RNA helicases associated with pre-mRNA processing. [Unknown function, Enzymes of unknown specificity].	0
NZ_LR698998.1\|WP_111506253.1\|3032555_3033443_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.64824e-55
NZ_LR698998.1\|WP_111503835.1\|3036512_3037055_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.08568e-18
NZ_LR698998.1\|WP_076205837.1\|3030992_3031577_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	9.86587e-14
NZ_LR698998.1\|WP_038570606.1\|3013455_3014160_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	1.92831e-113
NZ_LR698998.1\|WP_076138629.1\|3018047_3019055_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_LR698998.1\|WP_111503829.1\|3034776_3035634_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	8.8828e-29
NZ_LR698998.1\|WP_111503819.1\|3019180_3020059_-\|DUF1835-domain-containing-protein	gnl\|CDD\|378075	pfam08874, DUF1835, Domain of unknown function (DUF1835). This family of proteins are functionally uncharacterized.	1.69014e-28
NZ_LR698998.1\|WP_076135214.1\|3027839_3028262_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.30402e-13
NZ_LR698998.1\|WP_076135216.1\|3027302_3027701_+\|DUF1992-domain-containing-protein	gnl\|CDD\|378159	pfam09350, DUF1992, Domain of unknown function (DUF1992). This family of proteins are functionally uncharacterized.	6.92344e-23
NZ_LR698998.1\|WP_036686502.1\|3020412_3021876_+\|circularly-permuted-type-2-ATP-grasp-protein	gnl\|CDD\|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
NZ_LR698998.1\|WP_111503817.1\|3014441_3018011_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_LR698998.1\|WP_111503821.1\|3024019_3024829_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.60595e-90

>NZ_LR698998.1|WP_111503823.1|3024820_3025297_-|SRPBCC-family-protein
MLANIQKEDQHYVARFERQLKHSATEIWSYLTKNEKLALWFSELKIEDLRKGGLIKFDMQNGMFVDMEITVLQHQSIFEFTWAEDLVRFELYPNTEGCLLILNETLQTLTPHTPRDLAGWHVCLEVIQHLLEGTTLESRKDEWNKWYEQYREAISKLG
>NZ_LR698998.1|WP_111503821.1|3024019_3024829_+|SDR-family-oxidoreductase
MSPNISKKQRFIGKTAIITGAGSGIGRATAIKLAREGASVALFDLNLERTSSLAEKLNKFRKDCALAIEVDTSDEKKMEEAVRCTVEQFGGVDVVFANAGINGAVCPIEELSLSDWERTMSVNLTGTFLTLKYTIPHLKDKGKGSIIITSSINGNTRFASFGWSTYSTTKAGQVAFAKMAALELAKFKIRVNVICPGAIATNIDETTEMSEDVEAIVIPIEFPDGAQPLADGPGKPDNVADLVAFLASDESIHITGAQIVIDGAESLLS
>NZ_LR698998.1|WP_076126126.1|3022901_3023768_+|transglutaminase-family-protein
MKIQINHTTTYSYPEPVTDSVNEIRLTPRTNYRQSCYHHEVEVSPAANLLTYEDFFGNRVHAYSVNKPHTEMVIHTKATVVTLDKAQGTDLPRTSLEEQVKLLNDEKFQNRYIEFILPTRYTEVTPELVEFASQYPFSEAEDMYEWILKLSSTIYEQFTYDPEATSVNTTVKKALKLKRGVCQDYAHLMIAVCRSVGLPSRYVSGYHFVGDLQSSNANFEQASHAWVETHIPGTGWLGFDPTNNVEVNWRYIKLGHGRDYKDIVPVKGVYRGGAGTLTVKVDVRKLDN
>NZ_LR698998.1|WP_076104260.1|3021951_3022905_+|alpha-E-domain-containing-protein
MLNRNAEALFWIGRYIERAENHARLINVHYHIQQEEDFQEEGHKWSRLIDALGVRSEYLQQFETFSEQDVLSFITLDLGNSNSLFSCVHHARNNLRTLRQHLPSELWDIVNSFNLWLGERSVADIMSGPHHFYQQVKERAAMFLGAEQSVMLRGNEWHFIESGRFLERAENTTRILQAVIASCRFKELNAIYIQLQAVLKSVSGYQAFRRYYADAMSPESILDFLIANPKFPRSIRFSFHQLEEHLARLELDSSEKGSGHEKVIRQAGKLKAELDYMEKEEMSGELVEDVLQSLVISCQRLGKTMEGAFFRREGVSV
>NZ_LR698998.1|WP_036686502.1|3020412_3021876_+|circularly-permuted-type-2-ATP-grasp-protein
MSKLDPLPGLSPYPLQHFFDEMYADKRNVRPHYRHVNRMFSGMSSEELQGKQNLMQRRMMEEGITFTLYNPAQDHPMERTIPFDMIPRIIPKNEWERLEAGIIQRITALNLFIHDIYHEQYIVKDGIVPRRMIISNCYFRPEMSGLRVPGGAYITTSGIDLIRHHDGHYYVLEDNLRTPSGFSYLFKGRTLMNQLFPELSFASSIRDVDHSLNRFLSVLRSLSPSRRSDPVIALLTPGEYNSAYYEHAFLAQQMGIHLVEGRDLVTKDHKIYLKEMNGLRRVDVLYRRLDDDYIDPLAFQPDSLLGVAGLMNAYRAGNIAIANAPGTGVADDKAMYVYVPDMIRYYLNEEPILGNVPTYLLSRPDERLYVLENLSEMVVKETSLSGGYGMLIGSEATKEELAEFRMKIIADPDRYVAQPIMSLSRAPVLSGGTMAPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVMA
>NZ_LR698998.1|WP_111503819.1|3019180_3020059_-|DUF1835-domain-containing-protein
MEHKYTMSMEQEETRRNHIYLLFGLSEAGSMKVALSHLGCRHLIRVLSFNETFSAGPLHGLHNNEGYHTRELWFQERFSDQGYHLNPQHKLAAMIQTLKEIPEDKKITIWCGDNSHDQTGLRFALSILSERTQPIHVIDPVKACREIAAPFEIGLYPRALSQLPNEALQKIIKITENTSPITTAQRKQYELEWQKISNTEEMLRVWAESQLMNVTESYYDEEILSLILQLQQYEDRDGYVNAGLIVGTIIGQWNLYLSTSFIEYRFWRLISEGKLLFKGIPYAMLLYFLKVA
>NZ_LR698998.1|WP_076138629.1|3018047_3019055_+|signal-recognition-particle-docking-protein-FtsY
MSFFRKLKESISGKTESVTKQFRDGLEKTRKGFVEKVSDLIIRRKKIDEEFYEELEEILIGADVGVNTVMTLVEDLRAEVKQNRIEDAAELKPILSRKLMELLRGDDDNSLKENPNGITVILFVGVNGVGKTTTIGKLAHRYKQEGKKVLLAAGDTFRAGAIEQLEVWGQRAGVDVIKQQAGSDPAAVMYDAVQAAKQRNVDILICDTAGRLQNKSNLMEELNKIFRVIQREIPSAPHEVLMVLDATTGQNALTQAKLFGEKSGVTGLVLTKLDGTAKGGIVVAIRQEMNLPVKFVGLGEKMEDLQPFDSQQFVHALFAGLIAEEEESEEAEEQV
>NZ_LR698998.1|WP_111503817.1|3014441_3018011_+|chromosome-segregation-protein-SMC
MFLKRIELAGFKSFADKTEMEFVRGITAVVGPNGSGKSNISDGIRWVLGEQSAKSLRGGKMEDIIFAGSDARKAVNYGEVSLTLDNEDHTLPLDFSEVTVTRRVHRSGDSEYLINKQSCRLKDITELFMDTGIGREAYSIIGQGRIEEILSTRSEDRRGIFEEASGIVKYKSRKKDASRKLDDTEQNLLRIHDLISELEDQIGPLKDQSEKAIRFKELREQLKHQEISVYVHQIEGIHTAWQEGNAKLETLKDEQLELSTVVSAHDAKLESGRSELRTIEAQIEKQQEQLLRYSEAFEKSEGYGEVLRERKRNLESNREQLMLTLGSVGERSADRQREVVDLELKLEQSRLKLVDLRKQIEDEEARLEGVADGISQSQEEKLKSALLELMNLMANARNEIRYADQQKENLERRMSRSEEESGKWTARHEELSANQKGLKDKIAQLGKELSNLRGAYITESEQLSKRQKLIEETQSGLRKWEQKREAQVSRHETMKEMQDDFDGFMLGVKEVLKGARKGQLNGVHGAVAELISVPEKLEMAIETALGASLQHVVMDNETVSRQAISFLKQRQLGRATFLPLDVIRPRQISGSDRGMVGDADGFVGIGSELVGYDDKYTSIIGSLLGNVVIAESLEQANRIAARCQYRYRVVTLEGDVVNAGGSMTGGSQHKKNNSLLSRKRQLDQLSSEIEESERQIVKLKQGIAKLREEQENASVKLEDLRRDGDEKRLEEQRVSGDLKQLEHELRHVQEQVESTGAERSGFESEVRALEEARKQATAELERLEKEEKEAHEGIRNAESARKANESAKEELQGKLTSMKVSEGKLDQEIFSLEEQLRRLRQDVGSQDKELRQNRNLLHTIEQDLANNALEAVKQKEDLNSYRLKKEETTGTLDFARAERTALTRKLELEEGKTKDQRQALKVVEDKLRATEVSVGRLDVELDNILRKLSDDYELSYELAKQRYPVPEDVPAAQADVQRLKRSISALGEVNLGAIEEYQRVHERYTFLSGQKDDLVEAKTTLYQVIREMEDEMSKRFKQTFDAIRKQFGTVFSKLFGGGRADLMLLDPEHMLETGIDIVAQPPGKKLQNLQLLSGGERALTAMALLFAILQVKPVPFCVLDEVEAALDEANVVRFAQYLREFSEQTQFIVVTHRKGTMEEADVLYGVTMEEGGVSKLVSVRLEDEEAEIA
>NZ_LR698998.1|WP_038570606.1|3013455_3014160_+|ribonuclease-III
MKGELKQLQQQLQIQFHDSVLLKQAFTHASYVNEHRFNQHQDNERLEFLGDAVLELTVSEYLYNLLPDRPEGELTKLRAAIVCEPSLVKFAESLGFGRYVLLGKGEELTGGRTRPALLADVFESFVGALYLDQGLETVRSFLDNHVFPLVETDGKLQMQMTDYKTELQELIQQHNMGTLEYRIIEERGPAHEREFVSEVYMANRSLGKGSGRSKKEAEQQAAAAALLHLKEDGA
>NZ_LR698998.1|WP_076101782.1|3012204_3013440_+|beta-ketoacyl-ACP-synthase-II
MSHRVVVTGMGVVTSLGKDLETFWDNLMSGKSGVSQVETFDVSEYTTQIASSVKDFDPEALFGRKEARKMDRFVQFAVAAGEDALRDSGLKIGEDIDAERIGVSVGSGIGGLGTWEDNHNLLLEKGPKRVSPFFIPMMIANMGSGQLSINLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMICGGSEATIRPTGMAGFCAMRAMSTRNDEPEKASRPFDVDRDGFVMGEGAGILILESLEHAEKRGAKIYAEVIGYGLSADAHHMTEPDPDGAARCMKMAIRDAGISPEDIDYINAHGTSTPVGDRSETAAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINLDNQDPECDLDYVPNVPRKADLDIVMSNSFGFGGHNATVILKKYN
>NZ_LR698998.1|WP_076135216.1|3027302_3027701_+|DUF1992-domain-containing-protein
MGMMSWLAEQRIQESMRNGEFRDLPGHGKPLELEDLSGVPEELRMSFKIMKNSGLVPEEISLRAECVTLEGLLAACHNSGSVETNEGKALRSKLSMKRLRLQELLRERGLDSNPAFIQYSAQIHEQMIKEEE
>NZ_LR698998.1|WP_076135214.1|3027839_3028262_-|GNAT-family-N-acetyltransferase
MIFVTKATISDLPMLTKIDSKIIGNESRKSKIEKYINHEQCYVASHNGTLVGFACYDTTFFECCFIQLVIVDPEFRRLGIAKTLLSYIEEQCPTPKLFTSTNESNTIMQQLCLSQGFVKSGVIENLDDGDPEWVYFKQIR
>NZ_LR698998.1|WP_111503825.1|3028401_3030894_+|ATP-dependent-helicase-HrpB
MKQLPIIQVLPDLKNILNTAQAAVLIAEPGAGKTTGMPPAFLDEPWMAGKSILMLEPRRLAARSAATYMASCLGESVGQTVGYRMRNDTKVGKNTRIVVVTEGVLTRMLQSDPSLGDVGLVIFDEFHERSLHADLGLALALEAQAVLREDLRILIMSATLDSERVSALLGDAPVVNCPGRTYPVETIYVPTTGNLPLEKTAAAAVRRALAEQPGDILVFLPGEREIRRTQSELENGSLPVPAIIRPLYGQLPQNIQDAAVAASVQGKRKVVLATSIAETSLTIEGVRTVIDTGQRRTQVFSPRTGMPSLTTVPVSKASADQRRGRAGRTAPGVCYRLWSQEEHNRLPDDNVPEIMQTDLAQLALELALWGVRDPAALSWLDAPPAAPYAQGTALLRQLGALDAGGAITAHGHSMAALGAHPRAAHMLLRAAELGAAPLACRLAALLQERDLFKGPAALDCDLTLRVEALLRFERSADSGGADPAALRAVQRESRHFLAQLQAAPGENVNDISRCGLLLSFAYPDRIGQKRGDGAFLLSSGRGAAMREGQPLARSSFIVAASIDDRATQGAIMLAAEIEEGQLLTYHADRITEEADVYWDKESGSVKKRRRTMLGALVLKETSHERPSAEETANVLLSVIATDGIETLPWEKGTLQLRERLMFMHALRSDWPDVSDVALIATLEEWLLPYLQGMRNLRDLQRVPLARALEGMLDWNQRQMLEKEAPTHISVPSGSRVPVDYTNSAAPVLAVRLQEMFGQLDTPRIGGGKVPVLLHLLSPARRPVQVTSDLASFWRGTYFEVKKDLKGRYPKHYWPDDPLQAIPTNRTRPVK
>NZ_LR698998.1|WP_076205837.1|3030992_3031577_+|general-stress-protein
MTKKIVGIFDTEQEATRAIEGLHNQGFSNDEISVITRDRDELRNISEDTGTKAPEGVATGAATGGVVGGVAGLLAGIGALAIPGIGPILAAGPIVATLTGAAVGAGAGGLVGGLIGLGIPEDEAKEYEGYVESGKILVLVDDNGRGYQAHDVFRGNRSLNTQRYEGIYNEDTRLGNSMANRADRTADVYNRDKI
>NZ_LR698998.1|WP_111506253.1|3032555_3033443_-|LysR-family-transcriptional-regulator
MFFNLEWYRIFLYTARYKNLTKAANELHITQPSVSYAIKQMEDSLGLKLFHRLSKGVELTEEGRALLEYVEPSLVMLDSAQKHLHNLKQLNEGEVRIGASDSLIKNLLLPQLNAFHKQYPGIRIRLSHGKTHEITKRLKEGEIDCALVHMPIDDPQLNIQTLATLEDCFVVGRAFQELANRSLTAKELAELPFILLSPESSTRLFVDHWFASKGLSVKPDIELGSIDLLSEFARLGYGVAFISRSFVIDEIQKGELFELQLDDPPPPRNIGFAIHRDMRLSVAADSFVRMLRILD
>NZ_LR698998.1|WP_111503827.1|3033559_3034615_+|chorismate-synthase
MAGNTFGEVFKITTFGESHGAAVGVIVDGVTPNVEIDEAYIQKQMDRRKPGQSSVTSPRKEYDVVQIQSGIFEGKTTGTPLFVVLYNKDMKPEAYNDIQHSFRPGHADFTFLQKYGIRDHRGSGRASGRETAARVAGGAIARKLLERRGVEVLAYTQEVGGIKCQTFDEDVIEQNAVRACDAKAGAEMIKKIEHLASIGDSCGGIVECRIRGVIPGLGEPVFDKLDAELAKAMLSIGAVKGIEFGAGFEAASMLGSEHNDAMNKGGFLSNHSGGIIGGISTGEEIIFRISVKPTSSISVTQQTINTNGEEVEIKTEGRHDPCICPRIVPVVEAMACLVLEDLYKRQAAIFG
>NZ_LR698998.1|WP_111503829.1|3034776_3035634_+|NAD(P)-dependent-oxidoreductase
MRIFVAGAAGVIGRSLLPKLLQAGHEVIGLTHKEENKRILESIGAQAVIADVYERESIFAAIYVAQPEVVIHQLTSLSQRNFADNSRIRIEGTRNIVDASMATGVKQIIAQSISWAYEAGEGPATENTPLDTNASESRMRTIDGIRSLEKAVAEIPNHVILRYGMLYGQGTWYDTAGLMTEEIRQGRLTATEAVTSFLHVEDAAKAAVLALNWPSGPVNIVDNEPARGIDWVPVFSETLGVPKPPLHMGREGWERGASNTKARMDYGWSPSYPSWRSGFAQSLKG
>NZ_LR698998.1|WP_111503831.1|3035667_3035862_+|hypothetical-protein
MSKLKNFSLVVVNLIADLWFGIVRKPEFYDKHTVTRTKRGYVLFVSMAGIIAVGSAFWLYSRIY
>NZ_LR698998.1|WP_147614435.1|3036266_3036530_-|hypothetical-protein
MTYHQHTRECDLFVFPVNKMAYLSAKVSTSEERRTLLHFALQGHGFVFLADLFYERNHLKDVNVQLDKALVMCNSSKRVGARGCFAS
>NZ_LR698998.1|WP_111503835.1|3036512_3037055_+|response-regulator-transcription-factor
MLMVRQAFSEVIPWLNKLLSEARRTDRIGSQMEILLLLAISYEILRKDNQAYEVLEQALELAEPEGYIRIFLDEGQPLIRLLQHWLTAKRAASGHDYVSQLIQSYQSEQIDNVNTINIHFTKRELELMHHIIDGLSNDQIARQLFLSPGTVKRYIHDIYQKLEVKNRVQAVSKIKEKHWL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_9

3374643-3374716

Orphan

Consensus_repeat	Method
AATAGCGACTATAGAGTCCGATAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_9

>merge|NZ_LR698998|9|3374643-3374716|CRISPRCasFinder
AATAGCGACTATAGAGTCCGATAGGTTCTCAAATGAGCCGGATTATGGTTAATAGCGACTATAGGGTCCGATAG

>NZ_LR698998|9|9|3374643-3374716|CRISPRCasFinder
AATAGCGACTATAGAGTCCGATAG	GTTCTCAAATGAGCCGGATTATGGTT
AATAGCGACTATAGGGTCCGATAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111504108.1\|3374898_3375246_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319925
NZ_LR698998.1\|WP_111504101.1\|3368069_3369017_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_LR698998.1\|WP_111504099.1\|3367239_3367689_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|132602
NZ_LR698998.1\|WP_111504107.1\|3371067_3374208_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_LR698998.1\|WP_111504105.1\|3370227_3371022_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_LR698998.1\|WP_036677315.1\|3380979_3381615_+\|glycoside-hydrolase-family-11-protein	unknown	unknown	gnl\|CDD\|366111
NZ_LR698998.1\|WP_111504097.1\|3366599_3367088_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|238612
NZ_LR698998.1\|WP_076133265.1\|3367726_3368089_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111504112.1\|3376262_3377144_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_LR698998.1\|WP_076133248.1\|3378977_3379688_-\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133400
NZ_LR698998.1\|WP_111504120.1\|3381747_3382575_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|335469
NZ_LR698998.1\|WP_111504103.1\|3369035_3370061_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_LR698998.1\|WP_111504118.1\|3379845_3380727_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|181553
NZ_LR698998.1\|WP_076203819.1\|3363082_3364225_-\|xylanase	unknown	unknown	gnl\|CDD\|225940
NZ_LR698998.1\|WP_111504114.1\|3377306_3377750_+\|DUF1569-domain-containing-protein	unknown	unknown	gnl\|CDD\|369441
NZ_LR698998.1\|WP_052097044.1\|3365576_3366476_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176543
NZ_LR698998.1\|WP_111504110.1\|3375596_3376163_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076133270.1\|3364275_3365250_-\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|350131
NZ_LR698998.1\|WP_111504116.1\|3378117_3378927_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225928
NZ_LR698998.1\|WP_111506289.1\|3382678_3383533_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176133

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111504108.1\|3374898_3375246_+\|glyoxalase	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.12853e-08
NZ_LR698998.1\|WP_111504101.1\|3368069_3369017_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	1.37326e-124
NZ_LR698998.1\|WP_111504099.1\|3367239_3367689_+\|OsmC-family-protein	gnl\|CDD\|132602	TIGR03563, perox_SACOL1771, peroxiredoxin, SACOL1771 subfamily. This protein family belongs to the OsmC/Ohr family (pfam02566, OsmC-like protein) of peroxiredoxins.	2.64173e-72
NZ_LR698998.1\|WP_111504107.1\|3371067_3374208_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	6.61853e-53
NZ_LR698998.1\|WP_036677315.1\|3380979_3381615_+\|glycoside-hydrolase-family-11-protein	gnl\|CDD\|366111	pfam00457, Glyco_hydro_11, Glycosyl hydrolases family 11.	4.66437e-88
NZ_LR698998.1\|WP_111504097.1\|3366599_3367088_-\|nucleoside-deaminase	gnl\|CDD\|238612	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate. The functional enzyme is a homodimer. Cytosine deaminase catalyzes the deamination of cytosine to uracil and ammonia and is a member of the pyrimidine salvage pathway. Cytosine deaminase is found in bacteria and fungi but is not present in mammals; for this reason, the enzyme is currently of interest for antimicrobial drug design and gene therapy applications against tumors. Some members of this family are tRNA-specific adenosine deaminases that generate inosine at the first position of their anticodon (position 34) of specific tRNAs; this modification is thought to enlarge the codon recognition capacity during protein synthesis. Other members of the family are guanine deaminases which deaminate guanine to xanthine as part of the utilization of guanine as a nitrogen source.	5.52104e-31
NZ_LR698998.1\|WP_111504105.1\|3370227_3371022_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.0331e-52
NZ_LR698998.1\|WP_076133248.1\|3378977_3379688_-\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|133400	cd04773, HTH_TioE_rpt2, Second Helix-Turn-Helix DNA binding domain of the regulatory protein TioE. Putative helix-turn-helix (HTH) regulatory protein, TioE, and related proteins. TioE is part of the thiocoraline gene cluster, which is involved in the biosynthesis of the antitumor thiocoraline from the marine actinomycete, Micromonospora. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Proteins in this family are unique within the MerR superfamily in that they are composed of just two adjacent MerR-like N-terminal domains; this CD mainly contains the C-terminal or second repeat (rpt2) of these tandem MerR-like domain proteins.	1.65155e-25
NZ_LR698998.1\|WP_111504120.1\|3381747_3382575_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	5.11095e-46
NZ_LR698998.1\|WP_111504103.1\|3369035_3370061_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	5.97697e-22
NZ_LR698998.1\|WP_111504118.1\|3379845_3380727_+\|alpha/beta-hydrolase	gnl\|CDD\|181553	PRK08775, PRK08775, homoserine O-succinyltransferase.	0.00123017
NZ_LR698998.1\|WP_076203819.1\|3363082_3364225_-\|xylanase	gnl\|CDD\|225940	COG3405, CelA, Endoglucanase Y [Carbohydrate transport and metabolism].	6.68316e-82
NZ_LR698998.1\|WP_111504114.1\|3377306_3377750_+\|DUF1569-domain-containing-protein	gnl\|CDD\|369441	pfam07606, DUF1569, Protein of unknown function (DUF1569). A family of hypothetical proteins identified in Rhodopirellula baltica.	0.000360145
NZ_LR698998.1\|WP_052097044.1\|3365576_3366476_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176543	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	4.65185e-106
NZ_LR698998.1\|WP_111504112.1\|3376262_3377144_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	2.00854e-16
NZ_LR698998.1\|WP_076133270.1\|3364275_3365250_-\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|350131	cd18619, GH43_CoXyl43_like, Glycosyl hydrolase family 43 protein such as metagenomic beta-xylosidase/alpha-L-arabinofuranosidase CoXyl43. This glycosyl hydrolase family 43 (GH43) subgroup belongs to the GH43_AXH-like subgroup which includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), alpha-1,2-L-arabinofuranosidase 43A (arabinan-specific; EC 3.2.1.-), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. Included in this subfamily is the metagenomic beta-xylosidase/alpha-L-arabinofuranosidase CoXyl43, which shows synergy with Trichoderma reesei cellulases and promotes plant biomass saccharification by degrading xylo-oligosaccharides, such as xylobiose and xylotriose, into the monosaccharide xylose. Studies show that the hydrolytic activity of CoXyl43 is stimulated in the presence of calcium. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	0
NZ_LR698998.1\|WP_111504116.1\|3378117_3378927_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	1.64168e-21
NZ_LR698998.1\|WP_111506289.1\|3382678_3383533_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176133	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold. YofA is a LysR-like transcriptional regulator of cell growth in Bacillus subtillis. YofA controls cell viability and the formation of constrictions during cell division. YofaA positively regulates expression of the cell division gene ftsW, and thus is essential for cell viability during stationary-phase growth of Bacillus substilis. YofA shows significant homology to SoxR from Arthrobacter sp. TE1826. SoxR is a negative regulator for the sarcosine oxidase gene soxA. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine, which is involved in the metabolism of creatine and choline. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.53956e-74

>NZ_LR698998.1|WP_111504107.1|3371067_3374208_-|response-regulator
MKNKTILNKLAIILLFISILFGLRCIWLSIFKVSNTVPVINNGVLDLRGQNLEQANLFRLDGEWSFYPSQFVSSKTSTIPKLSHSLQVPGNWNHVMGSDQNSSYGYGTYHLRILVEPLQQPVALWIKQIYTASSVEINGSLLLNNGTISLDADTYVPKTTSYKVSYFTKNTTVIDVLIRVANFDLPYKGGIAGPVYFGSQEKVDRTYFYTVGFQLLTAIILLLHGLYACILYLFNPKERALFLVGLMTLSVAVIILARNDNLLLAIVPINYTWSLKIRLLAFLWQNLFILLVFRKFTSVAKINKGLRAYVVSLGLYSVFILTVPAYWVSTSIHLGIIQVFQYIPFIWLLYSLGRLLFKKQDDKDVVFLLLSGAAIVSNLLWNLWDSNGHYSIVYYPLDIIAAIVGFSAYWFKKYFQNAKENMELNEQLKKADKLKDQFLANTSHELRTPLHGIMNIAQNIVTKEKDRLYESSRQDMELLITISRRMSHMLGDLLDVVRLQEHRVILQQESISVQSVVPGVIGMLQYMIEGKPVQLSMDIPEAMPPVLADEKRLVQVLLNLVHNALKYTDAGLVAVKAEEQDGQVLIYVTDTGVGMTEETMARIFLPYEQGPHGINDGRGIGLGLSICRQLVELHGSSLSIQSELGKGSTFSFTLSLADSYSEQIIRQTEPTVSYLADEIHRQMTEWGISEHQPSNHSEKIPPLFTEIKVNILVVDDDPVNLNVLKGILETEPYIITTVNSAHEALELLDKRNWDLLIGDVMMPQMSGYELTQKVRTRYSLYELPILLLTARSQPEDIYTGFLSGANDYVTKPVDAVELKYRIRALTAMKLSFNERVRIEAAYLQAQIQPHFLFNTLNSIAALSDLDTKKMQELIGAFTSFLRISFDFLNVGELVNLSHELELVESYLYIEQTRFAERISVVWKIDPNIDILIPPLSIQPLVENAVKHGILKRQQGGTVQIRIIRLHKAVKIEVEDDGQGMDSGTLSLLLKPLMEGKSGIGLANTHRRLSQLYGQGLSIQSKPGEGTLVSFVVPEDSDNFSSKKAAP
>NZ_LR698998.1|WP_111504105.1|3370227_3371022_+|SDR-family-oxidoreductase
MDMGLNNKTALITGSTKGIGKAIAIELANEGVNVLINGRNYDQVEQTVNEIKSNFPATSPQNATADIVDIAQREALFEKYPNIDVLVNNMGIYEIMKYEDVDDEIFEKYIRTNVLAANGLTKFYLPKMLQKDYGRILFIASEEAVMPSGQMPQYAMTKSMLLSLSKSLSKLTIGTEVTVNTIMPGPTLSENVHQIIDGIYSNEDMTFSEKERKFMTTNLPQSELQRFIKPFEIGRLAAFVCSPYASAFKGSPIRMDGGMVPTIF
>NZ_LR698998.1|WP_111504103.1|3369035_3370061_+|helix-turn-helix-domain-containing-protein
MKSHTSDQIKIPPGFWAGLSQLGITAQDVASKANLSLSQITESEVTTAHYFAVWQAYSDLIGDTAEGIIKLATVFETTQYPPTVLATYHAKDYRDALNRMVRYKQMCPPESLRITEEGELCTIELEWQHPGHSGPPLLLGLTLAFLLELGRRGTSLPLTAQLVEFSQPIGNEKILEAYFGCRIQIGAQYNRLTLRRNDLDHPFISYNEELLEILTPVLDRTLAEQKGTCSITERVKWIMKRSFSGGRPDIQAVAKALSMSDRTLQRRLTEENTSFKQLLTQARHEQAREYLADPSLDIKEVAFLIGYEDQNSFYRAFRLWEGDTPSNWRNEHLGLNTIPSS
>NZ_LR698998.1|WP_111504101.1|3368069_3369017_+|LLM-class-flavin-dependent-oxidoreductase
MTTTSIKLSVLDLVPVFNTVDASTALRQAVKLAQTAERLGYSRYWVAEHHDMPGLACTSTEVLLSHIGAKTTHIRLGSGALLLPHYKPLKVVEAFHLLASLYPGRIDLGLGRAPGGTAEVSLALSGNFLENVWKMPELLKGVTELLQGNYSYEGRSITARPVPPVSPELWLLGTNKKSAAYAAEFGAGYVFGQFMSDVAGEEVLQAYRETFTPSSRSPEPQAMVAVGVICAETEEEAERLASSGTALFQQEGSAEAKSEPLERKLLVGTPESVKGKLERLSLLYGVNEFIIVTMIPDYEKRLHSFELLAQACWSS
>NZ_LR698998.1|WP_076133265.1|3367726_3368089_+|hypothetical-protein
MNVELYKDLIKDDRGNYYVAVQKESNELTLVNAMLERSYQELWEFNEAFKKKYAEYEHQFIGKMIMDKLRHDVVFASKEDGHGRMYDLAAVSVDYKLIFIDMIEFYRNPRVGLNHDNNIH
>NZ_LR698998.1|WP_111504099.1|3367239_3367689_+|OsmC-family-protein
MKHPFILNAVWNGGRNSDGTIEAGQLKTQISIPKEMGGPGVGTNPDEMLLGAAATCYLITLAAMLERVGLTTSELTLTSEATVDVTNNIFTYEAIKHSPLITLTKDASQDDIDKTIRIAHKAEGSCMISRAVAGNVEITTEPTVLTASL
>NZ_LR698998.1|WP_111504097.1|3366599_3367088_-|nucleoside-deaminase
MINDTDIKHLKRCIELAQIALEAGDEPFGSVLVSASGEVLAEDRNHVGSGDHTQHPEFALARWTAQNMTLEERKQATVYTSGEHCPMCAAAHGWVHLGRIVYASSSKQLSAWLKDMGIAASPVRNLSIQEVIHDAFVDGPVPDLAEQVRELHLQFHEKRLLQ
>NZ_LR698998.1|WP_052097044.1|3365576_3366476_+|glycerophosphodiester-phosphodiesterase
MQKIQNSRIYFIGIHVLLLILLFTSLYAYSPWIRIKVKEIIMPADKVYTIAHRGASGYAPENTIPAFELAIDMKTDYIELDIQLTKDHVPVVIHDGTVNRTTNAKGYVKDFTLEQISKLDAGSWFNEQYPMFARDKYVDLRIPTLKEVFERFGKEVDYMIEIKDPTSNSNIEALLNEEILNYDLSAHVAIHSFSEASLRRFHSINPAVPLYQIVWYDFPVYKISESYVNRLKTYAVGISPNFQKINAAYVAQAKNSGLKVFPYTVNYQVNMDKAVIWGVDGVHTNFPDRFSEVIKNNKR
>NZ_LR698998.1|WP_076133270.1|3364275_3365250_-|glycoside-hydrolase-family-43-protein
MTKPVQPNEPLVTHIYTADPSAHVFEGKIYIYPSHDLDHDMISNDNGDQYNMEDYHVLSIDGDGSPCIDHGEVLHVKDVPWAKQQMWAPDAAYKNNTYYLFFPARDHDDIFRIGVATSASPSGPFTPEPNYIPGSYSIDPAVFVDDDGKSYIYFGGLWGGQLEKWQTGSFVANAEGPAETAPALGPIVAELSEDMLSFEGEPREISIIDTNGNAILAGDEERRYFEGPWVHKYNGYYYLSYSTGTTHNIVYAISKDPLGPYVYQGKILTPVLGWTTHHSIVQFKEKWYLFYHDSSLSGGADNKRSVKYTELKYNDDGTIQTIHP
>NZ_LR698998.1|WP_076203819.1|3363082_3364225_-|xylanase
MPITQQGAFYTGKYRNLFKELGFSEDQINAKLEETWSDLFYGDPNVRIYYPLDEDKSYILDTGNLDVRSEGMSYGMMMAVQMNKKDEFDRLWNFSKTFMQHKEGRYTDYFAWHCKPDGTRISQGPAPDGEEFFAMSLFFASKRWGNGPDPYNYSEQARTILRACVHKTETGAGDSMWDAETKLIKFVPESTFSDPSYHLPHFYDLFALWADEGDHMFWREAAEASRTYLHTTCHPVTGLAPEYANFNGTPAEPQPHGDFSHFFSDAYRVAANIGLDWAWFQKDSWQVDQCNRIQAFFRNIEVSNYRRYTIEGQAFDEPALHPVGLLATNAMASLASDGPEAEHFVRLFWDTPLRTGQSRYYDNCLYFFSLLALSGNYRIY
>NZ_LR698998.1|WP_111504108.1|3374898_3375246_+|glyoxalase
MIKGFGGIFWRTKNFEATKKWYSEVLKLDIENWNGTVIKPQVENETIFSFFTEDDSYFPTEQQVMLNFQVHDLNETIKHFEQIGVPLAKKIEISEFGKFIWIEDPEGRLIELWEK
>NZ_LR698998.1|WP_111504110.1|3375596_3376163_+|hypothetical-protein
MNLRLITLICLFTFAFFIANGQDAKALSCVEIGSPKEAIEVYGGAIYGEVKQIKVDLKQEGFAGPKEKIRYILVDVERSWNTEVDSQIIVGTDYTWGFDFKEGNKYLVYISEVDGVTSSSPCSSTIEMNNLNQATELFGEGLRPKQQVHIEYKMWLMFEQDIDLYIIIAIGLVVISFIYMRARKKKKG
>NZ_LR698998.1|WP_111504112.1|3376262_3377144_+|aminoglycoside-phosphotransferase-family-protein
MNLVETIIERFNLNVLSIDNVPESFSSQVYKLNLTNGETVYAKIPYNRDKLYREYRMLELLREVLPVPKVLDFWSGDDLISGALLLSEIKGIPCTGAIDDELAFQIGVLHARLHEVKMPGYGVEGLDGFQFFNQNNWRLYIRNSFEKFIEPCKEVLERGLFEKCINHFESTFSVLPPPDDPCVVHMDFRQGNILTNNNVVVGIIDFESARGGSSEIDFTKINRYVWEVNPQSRISYKEGYSTIRPLMDLETVLPFYDFYDAFSAVVWCKNRGIEKNRAFLKESISVLQKSVGC
>NZ_LR698998.1|WP_111504114.1|3377306_3377750_+|DUF1569-domain-containing-protein
MNTIAYRNVWINRPNNEKIETRKTQWGKMNVAQMLAHCSAFQDIAIGSSFPPRHWLGILIGRFVKSIFYNDKPVPHNMSTIPTILILDDRDFGEEKEILKQKIMNFQSNGPEKCSSHPHPFFGKFTPEQWGKGINKHLDHHLRQFGV
>NZ_LR698998.1|WP_111504116.1|3378117_3378927_+|GNAT-family-N-acetyltransferase
MFQKINVSDRILNQDMFIADEVQYNLIHLICESKSSTCLKDSAETMIYAQSTGHNAWLWSSKDIAEDKKAVLYAELIEFLKGTTLPGVSGEPKTTERFAQQYSQANHLQYESTMTIESYFCTNPKKPLNVKGIMQQATRKNAAIVAEFLAGFSEGAYGITVNPQTKILDAKRMIETGDLYLWFVDDKPVSMAYIAHRSARYSRLNAVYTPPSCRKKGYASALVAELCSMLLSEDLVPMLYADLKNPDSNKVYRNIGFVESGKIVDIKFK
>NZ_LR698998.1|WP_076133248.1|3378977_3379688_-|MerR-family-DNA-binding-transcriptional-regulator
MEEIYTPTQIAKQLNVSTTTLRRYEDQGLIPDVPRTASNRRCYTSIHVQAFITIRALLKGYEIPVVYDVMRKIKGQQMESALWAINQEQHKTQVEKERLEEVLRMFRDVDLSKYKELTVTNSMTIGEVAQMAGVNPSAIRHWEQEGLISSNRNKDNGYRVFTLTELRKIILISSLRKTVYYIENMKQLLNEIETHNYKKVEVSFQLALQKLNSQLMKQFFAIAELTNYVKLYKSNA
>NZ_LR698998.1|WP_111504118.1|3379845_3380727_+|alpha/beta-hydrolase
MKKIIQLANQSEIEVGMAGLPNRPTIMLPIAKKSVYNQEAENLKLWGVDPELGKHFVEGLADTFQVLYFDYEGHLFQYPVENLTADYIVKDLLHIADEMNVTGFSYYGYSWLALIGLQMAIRTDRLESLVMGGFPPYDGPYQEMRVVTHKTHTQALSNQNESVESPTGSENPNEMDWDNIKVTLDTRVTAQFVSLYQSLTAFDDRSIQHLLNLPKLAFAGGNDTIVYGENFGSVTVDIVGLLKKNMEQLSDLGWDVEILLGARMDHTKAMQPAVVVPLIKPWYMNVLLKNTGL
>NZ_LR698998.1|WP_036677315.1|3380979_3381615_+|glycoside-hydrolase-family-11-protein
MFKFNKKIVTVIMAASMSFSLFAATSSAATDYWQNWTDGGGTVNATNGSGGNYSVTWSNTGNFVVGKGWNTGSPSRTINYNAGVWAPSGNGYLTLYGWTRNSLIEYYVVDSWGTYRPTGTYKGTVTSDGGTYDIYTTTRTNAPSIDGTATFTQFWSVRQSKRATGSNVAITFANHVNAWKSYGMNLGSSWSYQVLATEGYQSSGSSNVTVW
>NZ_LR698998.1|WP_111504120.1|3381747_3382575_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MRKLLISLLLVVAISACSQEKPEQKDTYVLVKGGNFINANSNYKSTTISNFYIGQYEVTQKEWVEIMGSNPSAFKGDNLPVEMVNWYDVIDYCNKRSIKEGFKPYYNIDKNKKDPNNKSDNDTLKWTVTLNVGANGYRLPTEAEWEYAASGGQFSKSYTYSGSNKADEVAWYWQNAGDKYLSGDWNWPIIENNHNKTKSIGGKKPNELGLYDMSGNVREWCWNWYGDIDSKSGSFRVVKGGGWIGGINNNEISFRGKFEANGMGPDQGFRVIRGE
>NZ_LR698998.1|WP_111506289.1|3382678_3383533_-|LysR-family-transcriptional-regulator
MESGDLRIFQAVAREGSITKAAQVLNYVQSNVTNRIQYLEAQLEIPLFRRSNRGMTLTPAGENLLAYAEKILLLMDEAVITTQYSEHPAGPLRLGSIETTAATHLTPLLTEYHLRYPDVNLSLITGETHKLLQMVLDYQLDGAFVYGPIDQPDIEHIVAFEEELVLISQPGKSDMRELLTKPMLFFDVGCTHRAKAESFLNESGMSSYKIMEYGTLDVILSGVSAGLGVSMLPQSSISKAEEAGVITSHRLPEGYRDLQVWFVYRRNAVFSSALSKLIQMIEEM

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_10

4525882-4525993

Orphan

Consensus_repeat	Method
GCTCGATCCGCAGGCTTCAGCGGGAGATCAGGACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_10

>merge|NZ_LR698998|10|4525882-4525993|CRISPRCasFinder
GCTCGATCCGCAGGCTTCAGCGGGAGATCAGGACTCAGCTCTATCGGACACAGTGGACCTTGTGCTAATAGCGTATGCTCGATCCGCAGGCTTCAGCGGAAGATCAGGACTC

>NZ_LR698998|10|10|4525882-4525993|CRISPRCasFinder
GCTCGATCCGCAGGCTTCAGCGGGAGATCAGGACTC	AGCTCTATCGGACACAGTGGACCTTGTGCTAATAGCGTAT
GCTCGATCCGCAGGCTTCAGCGGAAGATCAGGACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111504836.1\|4533670_4534102_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR698998.1\|WP_076134641.1\|4529072_4529525_-\|flavodoxin	unknown	unknown	gnl\|CDD\|168663
NZ_LR698998.1\|WP_036685732.1\|4526986_4527280_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_LR698998.1\|WP_111504828.1\|4515871_4517719_-\|fibronectin-type-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|238020
NZ_LR698998.1\|WP_111504838.1\|4534294_4536736_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_LR698998.1\|WP_036685718.1\|4531209_4532073_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_LR698998.1\|WP_036685740.1\|4520816_4521740_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_LR698998.1\|WP_076134636.1\|4518863_4519829_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226967
NZ_LR698998.1\|WP_076204380.1\|4532076_4532823_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_LR698998.1\|WP_111504834.1\|4530147_4530978_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_LR698998.1\|WP_111504824.1\|4514254_4514941_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111504826.1\|4514953_4515598_-\|YhbD-family-protein	unknown	unknown	gnl\|CDD\|379048
NZ_LR698998.1\|WP_076130810.1\|4521756_4522710_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_LR698998.1\|WP_051491406.1\|4518043_4518652_-\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|235534
NZ_LR698998.1\|WP_036685737.1\|4522774_4524523_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_LR698998.1\|WP_111504830.1\|4524758_4525661_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_LR698998.1\|WP_076104466.1\|4529696_4530062_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_LR698998.1\|WP_076204403.1\|4519821_4520805_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_LR698998.1\|WP_076134639.1\|4527361_4528207_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR698998.1\|WP_076204396.1\|4528303_4529071_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111504836.1\|4533670_4534102_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.26956e-18
NZ_LR698998.1\|WP_076134641.1\|4529072_4529525_-\|flavodoxin	gnl\|CDD\|168663	PRK06756, PRK06756, flavodoxin; Provisional.	5.68952e-53
NZ_LR698998.1\|WP_036685732.1\|4526986_4527280_+\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	2.5444e-34
NZ_LR698998.1\|WP_111504828.1\|4515871_4517719_-\|fibronectin-type-III-domain-containing-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	2.87243e-14
NZ_LR698998.1\|WP_111504838.1\|4534294_4536736_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_LR698998.1\|WP_036685718.1\|4531209_4532073_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	4.58286e-48
NZ_LR698998.1\|WP_036685740.1\|4520816_4521740_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.60763e-97
NZ_LR698998.1\|WP_076134636.1\|4518863_4519829_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	6.60646e-145
NZ_LR698998.1\|WP_111504834.1\|4530147_4530978_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.31867e-13
NZ_LR698998.1\|WP_111504826.1\|4514953_4515598_-\|YhbD-family-protein	gnl\|CDD\|379048	pfam13171, DUF4004, Protein of unknown function (DUF4004). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 210 amino acids in length.	5.47651e-83
NZ_LR698998.1\|WP_076130810.1\|4521756_4522710_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.20377e-115
NZ_LR698998.1\|WP_051491406.1\|4518043_4518652_-\|50S-ribosomal-protein-L25	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	1.30755e-53
NZ_LR698998.1\|WP_036685737.1\|4522774_4524523_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.13302e-122
NZ_LR698998.1\|WP_111504830.1\|4524758_4525661_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.30263e-07
NZ_LR698998.1\|WP_076104466.1\|4529696_4530062_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.86582e-15
NZ_LR698998.1\|WP_076204403.1\|4519821_4520805_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.31413e-177
NZ_LR698998.1\|WP_076134639.1\|4527361_4528207_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.06351e-12
NZ_LR698998.1\|WP_076204380.1\|4532076_4532823_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	9.67833e-54

>NZ_LR698998.1|WP_111504830.1|4524758_4525661_-|winged-helix-turn-helix-transcriptional-regulator
MEYKVEVEFGSIYELLNSLHTYLCKKSYKKIDLGVAWANEIESTLSEELLSRLKETELNNEWKMLNLLIYCCPFKDDVDRVLNWIEGLSVGELYETLSKYVKVFPSHMEDYRNRVVFLLSEWNRQYFSQCNPVILSKLQQHADLKNTELNELDTAEFVNKTTNGFYFMPTDGLKKLVLIPQYHFQPANIIYCYGELTICHYAAWISMENEEISPFMYRAIRSLSEKSRLKILQALSGGRKTFTEIVKHAGISKGIVHDHIFNLRCAGLLHAYIEGENVTGYSLRLEGIHRMNEQLFEYLK
>NZ_LR698998.1|WP_036685737.1|4522774_4524523_-|ABC-transporter-substrate-binding-protein
MRKNAIVITSLLLTGSLLLSACANNSNNESSSANNAAAGSNSTNVEATTAPEIVPAGALSEPFTATDLSKLPAVAQKRTDTIIVGLTDPSGAFTPYFQQSGYDGNVSSLLYASLVTVDDKGVPTPELAESWDVSDDQLTYTFHLRKDLKFSDGSPLTADDVAFTWTIQYDKSYDGSSQLPSLNVKGGKAYKEGTSPTVEGIKVIDPQTISATLEQPNATALVQLGSNVLSKAYYGKDYKIGNLEYIKKLHEKPLGDGPYKLEKFIPGQEVRFVANENYFKGKPKTEHFIYKTTEGDVWQFVETGEVDYASFSATDENIEKLKALGFVNIIPYTPSTYGYLQVNLKHEQLKDKLVRQAIVYGLDRQSIYVDAAQGAGSIANIPASPISWSYTEEGINPYKYDPEKAKQLLDEAGWTVGAGGIREKDGKPLSIHYLGSKSKNTDIFIAVAKENFEALGIEFQPEVFADFNSLVSKVEGGDYDLVSFSTSMLTDPSDGFMQFFDGEITDYDNPKFLELYNKALATTDIEARKAVYKELYQLFNDELPIIFTSYKKTVYAYNGRIENLSVSPFIGLAGSLPTWSLK
>NZ_LR698998.1|WP_076130810.1|4521756_4522710_-|ABC-transporter-permease
MSAYLSKRLLYMVIILFAASLLIFCLYASTPGDFITGNIKLTAERKAELREIYGLNKPVLERYGIWMKNALHGDFGYSLAQQKPVLQLFNDYIWNSFLLAAVSTFLTWVIAVIIGVISAYKQYSWFDTLVMIAIFAAMSLPSFFIGLFLIKILAVDLKWLPPGGIITTGSNATGLAYFKEIVTHMTLPVVVMTLLGLGSLTRYFRSNMIDVLKQDYIRTARAKGLKERKVLFTHALRNALLPAITLVGFELPALFGGSLIIEKIFNWPGIGQLYMQSFGLRDYPLLMGFTMFIAILTVIGTLLSDVLYRIADPRVRL
>NZ_LR698998.1|WP_036685740.1|4520816_4521740_-|ABC-transporter-permease
MAVQSNVAGIAKPQTTKGKSSLFRQSMRRLLKNKLAVSGFVVVIFMFALCFIGPLFSPYTDNKINMAMMNKAPNMKHWLGTDALGRDILTRVMQAGRISLTVGLASMVLSVFIGALLGAIAGYYRGIADQIIMRIADLLLTVPSLPLLFIFGALLSEWKIPTDYRMYIVMLMLSIVSWPGMARMVRGQMLSLREREFMQAAVVLGLRDRRKLFNHLLPNIVPLLIVMATLNIGGAILSESVLSFFGLGVMPPTPTWGNMIDAANNMIDFQDRPWLWIPPGLSIFATVIAINIFGDGLRDVLDPKQKR
>NZ_LR698998.1|WP_076204403.1|4519821_4520805_-|ABC-transporter-ATP-binding-protein
MSDLMNIDGLSTYFFTEEGKVKAVDDVSFRVREGETVCIVGESGCGKSVTAMSIMGLVEEPGGKVAQGKIDFQGEDLLKMDKNTLRTIRGNEIAMIFQEPMSSLNPVIKIGEQIMEPLIVHLKMNKKQARIRAIELIKQVGISRPEQIADSYPHELSGGMLQRIMIAIAIACSPKLLIADEPTTALDVTIQAQILDMLREIKDSSGMSILLITHDLGVVAEMADYVIVMYSGKIVEEGEVVELFNNPKHPYTKGLLKSKPVINQRQDELYSIPGQVPNPLELVPSCYFHDRCEHCVPVCVSQQPRLKEVASRQKVACWLYEEAVVHA
>NZ_LR698998.1|WP_076134636.1|4518863_4519829_-|ABC-transporter-ATP-binding-protein
MPEALLEVNHLKKYFPVTKGLLNRTVGHVKAVDDISITLQPGETFGLVGESGSGKSTVGRTILRLTDKTAGEIKFKGTDIHSLSPAELRNIRPQMQLIFQDPYSSLNPRVRIGDAIGEALLDHGLCSKSEVRDLVLEALAACGLSSYHIDRFPHEFSGGQRQRIGIARALVLNPELIIADEPVSALDVSIQAQIINLFSKLQQSRGLTYLFISHDLSVVEHLCSRIGVMYLGSMMETASRDELFKNPLHPYTKALLSAVPIPIPKLKRERIVLKGDIPSPVNPPSGCKFHTRCPFAQEVCRSEIPVFRDVGSNHFVACHLV
>NZ_LR698998.1|WP_051491406.1|4518043_4518652_-|50S-ribosomal-protein-L25
MNTTVRLTERSGSTSSQRRKGFVPVVVYGAGSDSQSFTADAKTISGILASNPRAVLTLELPDSGKKNVVIQEIQRQPISKQLLHIDFQQIDMKAKLDTKVAFHFTGEPVGVKSGGVQQIELHELDIRTLPDKIAASFEVDISGLDIGDQLLVSDLPKHEGWEVLTPEDTLIVRISPPAAQEPTEEDTAEPAAAETAGEDKAE
>NZ_LR698998.1|WP_111504828.1|4515871_4517719_-|fibronectin-type-III-domain-containing-protein
MKMRKLFSILMTSLLVLGVALPFGGKANADAASDASNRALIWLKAQQDATAGYAFEGLVDSFEDFWGPNNPKQIVYTYDQAVAAIAFIVKGERTRAEQVLNKMRDIQDPSGFWLNSYWYNNGFGEEIRKHVGPVVWMAMAAMAYEKQYNDSRYRPMALKALDWSLQYKKANGSIAGGWSGWSNSDEPWSSTEHNIDIYRVLQYYASVDSSKAATYNSAASGVKTFLDNYVWDDTVKRFKGGWKNDTNLIDPKIPLDVNPWGVLALGVSETHNYGASLTYVENASGTPGTLANPRYKQTLTYNDAGNTLTGYDFDWTDEVLPAYDDNGNQIGNTGADVWFEGSAFMSLAYYLQGNASKADAINTEIIKKQGTSGASLGGIPYSLKGSSNSYWVMAQQNCVSSTGWLIMSLHRFNPFTGQYLTGGGNTGDTTAPTSPANLTVTSKTDTGVSLSWSASTDNVGVTGYIVYRGTQQVSTVGGTTATVSGLTPNTAYTFTVKATDAAGNLSSASNTATVTTNPTGGSGGGDHVTADFTAGVTRLSATEASIYITPVTSALYVDVHYKINGGSQLNYRMTNNSRTWKQTVSGLSAGSSIEYWFTYEKSGPQYDSAHYTFVQ
>NZ_LR698998.1|WP_111504826.1|4514953_4515598_-|YhbD-family-protein
MEEDLISKKQLLDLTGISYGQLYRWKRKQLIPEEWFIRKSTFTGQETFFPKDMILSRIDNIMNMKDGLSLDEMADKLSDKASFDRVSISAAELIERNIVSSMTLGKFGERLGIKNGYSFDQLTYLLAVDRLLSAGEMSMEEAELLFRTLMDKASNLESGSWELFFIRKMGVSSFILAQAPAELWFDEGVKLVSKILSADVIEQLKGKLAFKLVE
>NZ_LR698998.1|WP_111504824.1|4514254_4514941_-|hypothetical-protein
MDKRELPNLIINGVSGWAGGTYNSVRIDGVGKVTGPIVTRIFKGNGHMNLKNDLSAEEAECNGTMKVLGHLRFNSLKVDGMISVGESIRGESCTLHGMLNIKGDCELEDFAGEGSFSVGGLLSAGHVDFKLQGQGKAHEIGVESLVIRQTNSGVWSKMLSGIIPKLRSELRARTIEGDFIDLEFTTADVIRGNIVIVGPGCTVERIEYRDQITVHPEAKVGKVEKIGD
>NZ_LR698998.1|WP_036685732.1|4526986_4527280_+|N-acetyltransferase
MQIQNENGRFFVANDGKDLAEITYSLDKETGELVIDHTRVSEELRGQGTGQELVRAVVDKARNENLKIVPVCSYAAHQFEKHPEYKDVLSGNTGGRA
>NZ_LR698998.1|WP_076134639.1|4527361_4528207_+|GNAT-family-N-acetyltransferase
MTTADTFKNIEELQQRCEQYEGISLKLNWDMLRQPSSTGDTEWLVTYEDELLVGFLGLYGFGSDMEVCGMVRPGYRRRGIFTSLWNRAQTIIKRNNVSTLLLNAPAASSSGTAFLQTLPLQFNHAEYQMKWDGNSMVSSDVSSATGTVVLRPAREEEAHILVELDCGGFDMKTEDATEQYELHKQEGMQENIMIEMDGRPVGKMRVWTEDNESWIYGFTVDKRLRGLGIGRSALLQTIERERQNYNGVNLEVALDNPNALKLYESCGFVIQNKQDYYRYIG
>NZ_LR698998.1|WP_076204396.1|4528303_4529071_-|hypothetical-protein
MGGPVGSWFNKPRDVHTPPYKRLHDYRMEHIMLGGTENLASGAPATGLPRWRQQVQYAVGHTLNDFYSLLPEVRRETPIQFLLERRWPPRGDAFPSLLQYWDIKTSVADELMRIVSSNHLQEIPVMLYEQWHVPVPALNLELSMITQLAWNSSKSGRSVNIQKFMVNGNEDIITGFMHMANVFCHHAYGEPAETVEVFSLLDGRKYCFDGEAISLMESLDYVRLLSVFLEREVLADGSLSCSDRRNERGEANYLL
>NZ_LR698998.1|WP_076134641.1|4529072_4529525_-|flavodoxin
MAKVLVAYASLTGNTEEMAELIVEGIRQAGGEAVLKSVTECNAIEIKSYEGVLLGAYTWGDGELPDEALDFYEEMDELDLTAMKSAVFGSGDTGYAIYCGAVDVIEEKLKERGAVILQDSLKIEYGPNAAEKEACRQFGRQFIEACMAVT
>NZ_LR698998.1|WP_076104466.1|4529696_4530062_-|VOC-family-protein
MISSFEGTNIYTKDTAASAKFYTEVLGIPMPFEGYGNFDGAKLGFDKKQPGIIIWDAAKWENLTTGFVNLVFGCDNLDETYEQLKAKGLDCQPPVTMEYGGKEMNFRDPDGNHITLLEGAY
>NZ_LR698998.1|WP_111504834.1|4530147_4530978_-|AraC-family-transcriptional-regulator
MFNLSPLYFPLTAKPNHTSEFLPSQALQPFIRCFWGSVDVESIQKPETETIIPDTCMDIIWDLDRESGNTNTFFSGINDAPFEVSSDRKPGGSSTFGVRFHFWAVHFFADDHLRNVLNAHVDVEQYFGTFKKELGHLLEKVNSMDERIAAAEAYLLRRLERRGRTNDRMMNAVYTMVKQKGIVTAEDLVTSSNLSRRQLERLFQEYIGISPKKTADLVRFQNVWREMCHLPEQTKNMQDLIFAYGYSHQSHFINNFKKYAGRTPLEALVYAGRRMS
>NZ_LR698998.1|WP_036685718.1|4531209_4532073_+|class-I-SAM-dependent-methyltransferase
MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLNNETAKWRDVHGHYHRSSAGGGQWEMKKTIPDDWKISYGKLKFHLRPTNFKHTGLFPEQAANWSWMMDKIAAANRPISVLNLFAYTGGATVAAASAGASVVHVDAAKGMVQWAKENVQLSGLGERPVRFITDDVFKFVQREQRRGSKYDAIIMDPPSYGRGPGGEMWKLESSLYPFLESCMEIMSDNPLFMLINSYTTGISPTVLRNMLSMTMGKRYGGKLTSGEIGLPITSSGMNLPCGILGRWEA
>NZ_LR698998.1|WP_076204380.1|4532076_4532823_+|RluA-family-pseudouridine-synthase
MTQHSSGNNEAVSGGSQRFEVLYEDNHLLGIVKPVNIPVQEDATGDPDLLNLLKEDVKERFNKPGNVYMGLVHRLDRPVGGAMIFAKTSKAASRLSESVRTHGFHKVYLTVVHGKPPATRGRLTDTLLKDAKSNTVTVVRKGTPGGKEAILDYTVLDSAEGYSLLKIDLLTGRSHQIRVQLSSIGCPLYGDQKYGASVNRPGQQIALWSALVGFPHPVTKEEVELISLPPQTHPWDLWPRETLQKGLS
>NZ_LR698998.1|WP_111504836.1|4533670_4534102_-|MarR-family-transcriptional-regulator
MHASEFSKIWHKILKDYKLHMDSNLAPTLTDAQLTVLELLQERDAMKPSDLAPHLATSPAAVTMLLDRMEKHELIVRERDASDRRIVWVSITETGMEETARGLKIRSDFFAEALDPISSHNQQLLLYLMGKMVVTTTPEGSAP
>NZ_LR698998.1|WP_111504838.1|4534294_4536736_-|DNA-gyrase-subunit-A
MSSLSEQFLPAFLEEVVGDRFGRYSKYIIQDRAIPDVRDGLKPVQRRILYAMYDSGNTPDKPYRKSAKTVGDVMGNYHPHGDSSIYDGMVRMAQPWKMGHVLVDGHGNWGSMDDDPAAAMRYTEARLSPIAMEMMRDIEKRTVLFKDNFDNTAKEPVVVPSRYPNLLVNGTSGISAGFATEIPPHNLREVIDACIAVMQKPNIELEEIMTFMKGPDFPTGGTIMGGDGIMDAYRTGKGRIYLRSKTEIENMRGGKQQIVITEVPFQIVKSRLVTSMENIRLEKKIDGIAEVRDESGREGLRIVVELKKEADAQGVLAYLLKKTDLQITYNFNMVAIVNKAPQQLGLKAILEAYIAHQREVVTHRTQFDLERAEDRAHVLEGLVKALNILDEVIAAIKASKNRQDAQNNLVWMFGFSERQADSILTLQLYRLTNLEITSLQKELDEMMAKITHLRGILESDKKLVAVIRKELLEIRDKYGIDRRSLIQGEVEELKVSLEALVNAEDVLVALSADGYIKRTSMLSFTRSGGERHTSGVKEGDHIVRLLDVNTRDSLLVFTRKGQYFLLPVHQIPEFKWKEPGTAIVNVIGLSKGDGIVSVIPVNNLDDPQQSLVFVTRRGQVKRTELKEYSTSRSGAVAACKVAEGDEIITVASSTNDKDIVLVTREGMSIRFHENEVNPMGRVASGVRGIQLREGDEVISCFWVSEDEGEILAISDIGYAKRSLLVDYPSQSRGGKGMPTFEFKEGKRIRPNGSRLAGAFYCKEPLELNAVTRENAHHTFSSESAPLGERRSTGKQIVTVEKKDEIINLFPSVH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_11

4876445-4876537

Orphan

Consensus_repeat	Method
GACTAACCTTCTGAATTTCTTAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_11

>merge|NZ_LR698998|11|4876445-4876537|CRISPRCasFinder
GACTAACCTTCTGAATTTCTTAATATACGACTAATAGCGATTATGGGTCCGATCACCGTCTGAGCTTAAGACTAACCTTCTGAATTACTTAAT

>NZ_LR698998|11|11|4876445-4876537|CRISPRCasFinder
GACTAACCTTCTGAATTTCTTAAT	ATACGACTAATAGCGATTATGGGTCCGATCACCGTCTGAGCTTAA
GACTAACCTTCTGAATTACTTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_036682927.1\|4868989_4870456_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_LR698998.1\|WP_076134520.1\|4876960_4877599_-\|beta-phosphoglucomutase	unknown	unknown	gnl\|CDD\|213672
NZ_LR698998.1\|WP_076134519.1\|4873848_4875642_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LR698998.1\|WP_076130683.1\|4883544_4884336_-\|formate/nitrite-transporter-family-protein	unknown	unknown	gnl\|CDD\|376497
NZ_LR698998.1\|WP_036682919.1\|4860646_4862053_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_LR698998.1\|WP_036682923.1\|4863444_4865706_-\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_LR698998.1\|WP_036682945.1\|4882639_4883365_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_LR698998.1\|WP_111504991.1\|4879910_4882217_-\|family-65-glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|237517
NZ_LR698998.1\|WP_111504995.1\|4887396_4888107_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076134518.1\|4872500_4873829_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_LR698998.1\|WP_038572553.1\|4865958_4868580_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_LR698998.1\|WP_076098662.1\|4888257_4888953_-\|iron-sulfur-cluster-repair-di-iron-protein	unknown	unknown	gnl\|CDD\|274701
NZ_LR698998.1\|WP_076098630.1\|4871462_4872383_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_LR698998.1\|WP_076130684.1\|4884388_4884709_-\|nitrite-reductase-small-subunit-NirD	unknown	unknown	gnl\|CDD\|239606
NZ_LR698998.1\|WP_111504993.1\|4884741_4887165_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224171
NZ_LR698998.1\|WP_036682917.1\|4859633_4860518_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_LR698998.1\|WP_111504987.1\|4862490_4863228_-\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_LR698998.1\|WP_111504989.1\|4877631_4879914_-\|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl\|CDD\|224471
NZ_LR698998.1\|WP_076204958.1\|4889599_4890325_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036682930.1\|4870588_4871461_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_036682927.1\|4868989_4870456_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.24983e-42
NZ_LR698998.1\|WP_076134520.1\|4876960_4877599_-\|beta-phosphoglucomutase	gnl\|CDD\|213672	TIGR01990, bPGM, beta-phosphoglucomutase. This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	4.50654e-84
NZ_LR698998.1\|WP_076134519.1\|4873848_4875642_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.68559e-43
NZ_LR698998.1\|WP_076130683.1\|4883544_4884336_-\|formate/nitrite-transporter-family-protein	gnl\|CDD\|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	1.11656e-81
NZ_LR698998.1\|WP_036682919.1\|4860646_4862053_-\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.16936e-47
NZ_LR698998.1\|WP_036682923.1\|4863444_4865706_-\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_LR698998.1\|WP_036682945.1\|4882639_4883365_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.35105e-41
NZ_LR698998.1\|WP_111504991.1\|4879910_4882217_-\|family-65-glycosyl-hydrolase	gnl\|CDD\|237517	PRK13807, PRK13807, maltose phosphorylase; Provisional.	0
NZ_LR698998.1\|WP_076134518.1\|4872500_4873829_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.48673e-51
NZ_LR698998.1\|WP_038572553.1\|4865958_4868580_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_LR698998.1\|WP_076098662.1\|4888257_4888953_-\|iron-sulfur-cluster-repair-di-iron-protein	gnl\|CDD\|274701	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein. Members of this protein family, designated variously as YftE, NorA, DrnN, and NipC, are di-iron proteins involved in the repair of iron-sulfur clusters. Previously assigned names reflect pleiotropic effects of damage from NO or other oxidative stress when this protein is mutated. The suggested name now is RIC, for Repair of Iron Centers. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.52125e-88
NZ_LR698998.1\|WP_076098630.1\|4871462_4872383_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.62633e-69
NZ_LR698998.1\|WP_076130684.1\|4884388_4884709_-\|nitrite-reductase-small-subunit-NirD	gnl\|CDD\|239606	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.	1.79373e-42
NZ_LR698998.1\|WP_111504993.1\|4884741_4887165_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	0
NZ_LR698998.1\|WP_036682917.1\|4859633_4860518_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.36755e-79
NZ_LR698998.1\|WP_111504987.1\|4862490_4863228_-\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	3.78133e-114
NZ_LR698998.1\|WP_111504989.1\|4877631_4879914_-\|glycoside-hydrolase-family-65-protein	gnl\|CDD\|224471	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism].	0
NZ_LR698998.1\|WP_036682930.1\|4870588_4871461_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.25769e-60

>NZ_LR698998.1|WP_076134519.1|4873848_4875642_-|sensor-histidine-kinase
MLSRLIRPILKLNVKQQLILLFLIMISPILFLNIYGNMKAEQILKRHVTNAYVELNKQNFTIINRDIDTVNKITTTVIQNPLIQQINMTGSDTILERVKRYETIEKLLVSYSQGAERGDGIYYSLYIYDPEDYYFFAPNFPQVKKAGVYFFSKAEEPYWFEEVVQKKGRGSLKFTGKLSAQAENLKTLTYMRAVNNISRKAETIGVLVITKMDAKIGESLKSISLPDGDIYLTDLDNRVLASTTNNTGEIITLPETVVAEDLEGTVDVITSDFIYVVNNNHALGQKLVYKIAVKALLQQQNEMKSVIQYITVAYAVFGLIMITYFWRSLMTPLQKLAFFVRKFEPGNRVPETPKRGSNDEVSVLIGSTYDMARRLNGLITYKYQMELKQKESQLQLLYQQINPHLLYNTLESIYWKSSLEGNVESAEMIKELSKLMKISLSRGRELISLEEELEHATAYIKLQQHRYDYIFRVVMEIHPDTKRNLIPKITLQPLIENAIIHGVKNMGEDGEIIISAVCVDDTVEISIEDNGYKSVDYQAIEAVLNDDSPNPASGYGIRNINQRIHLHFGSDYGMSYTPRKEGGTLVTVKLPKSENQD
>NZ_LR698998.1|WP_076134518.1|4872500_4873829_-|response-regulator
MFNILVVDDEPLICKGLSNLLASSGLNIDHIYTANSGFEALDCIRMEEIDLLVTDIQMGAMSGIDLMQHAKLAKPWVQTIVISAHETFQYAQMAVRLGAKDYLIKPLNSEQFLDSVRNVLLKMGKPSPELDIFMSGINESFRLEEPLPEYSKLLNELLIEPEGVLCDAERLQKLDNLKLQGPYFSVLKIKVPLAGMNQEKHYTLRDRRLLCYAALNIAKELMDQEWNSTAFYAEDEEITIIIQWDEKSYEDSSASQINRLDILGRSLHFNIQKYLHLNAVIGISQILKGLSFMAVLNRQASKAILWNNEHNDHYVFYYGDFNWNSYTTDPSVEELHTRSNLIVEKAREYIDENYAQKGLTIHEVAKKNHVSPNYLSYLFKKNTGYNLWEYVIKLRMEESREMILNTDLRRYEIAERVGYESPEHFSKIFKKYYGISPSELKK
>NZ_LR698998.1|WP_076098630.1|4871462_4872383_-|sugar-ABC-transporter-permease
MNQTAVVSENPPALKGTPYKQNRWKKNFWGYMFLVPAVIIFVMFLWVPIFKGLLYSFYHVDFVKGNSFVGFENYARALSDPDVLTALKNTGYYMLLCLIIGFWVPIAFAIMISELRRFGGFVRVAAYLPFVMPGVVLYGLWRWLYDPVGPINAVLSSLGVDQVAFLTDTRWSMISLVFMETWQQFGSGMLIYLAAVLSIPRDWYEAAEIDGAGVWARIKYITLPSLRNLIILMLILQIIGTSQGYQSQMALLDGGPNNTTLTYALLIVKYAFTRLDYGTATALGMLMFIVLGGLGILQFKLNKEDN
>NZ_LR698998.1|WP_036682930.1|4870588_4871461_-|carbohydrate-ABC-transporter-permease
MKSADRGILSEHDLKKTSNKIVYGLMCVVILIMVFSMLYPICMTLFNGLKSNQEVNSFPPHFFPQEWHFSNLKEAMNYIDLLMFLKNTIYIFVGNMVVTLVVLGMSAFSISRMNVPYRKAIYFFFLMTLFIPATSYMIPNFVNLKELGLLNQYAAFWLPAGANTFYFLLLKNFFDGIHPEIFEAARIDGSSEPRSFFSIAVPLSVPIFATLAIFIFSTAWNDWFWPSLVMHSEEKYTLATAIYKYVINVKALNTNIKFAILFIVSLPPILVFLIFQKFIMRGVALSAVKG
>NZ_LR698998.1|WP_036682927.1|4868989_4870456_-|ABC-transporter-substrate-binding-protein
MRKYSSVLLSLLVAGSLLTACGGNNNNGNTTGNKEGEATTAPTNAATDNAGSATAAPTDDITQRKVTIKIHYPTPDLTEVRAQEDDKIKRFQEEYPNVEIVKDDWQYNVSEIGIKMAANEAPTFFNTYATEAKFLVEKGWVADITDLWNKYEFKDQINPVLQNQFIIDGKVFGVTQKGYVTTTMINKKMLDEKGVAVPPMDWTWDDMLNTAKGVADTKKGISGIAPMGKGNEAGWNWTNFLFEAGGEIQKIEGGKVVATFNSEAGIKALDFYKKLRWEANAIPQDWALGWGDAVGAFQQSRTAMVMAGSDGVIEQALNQGGLKPEDVLTYPMPAMEKGGKHTGVLGGDYLVINPNATPDEQEMAFRYITFDYFSDKGLEALDAVLQQRTTDGKYFIPPLLDYYSADSDFGKKTKAVYDKYTNVYQYSPDILGLLDGKPEAQYNTQDYYATMSNVIQELFSKKGTDSKTQLEAAAKTVQEKFFDTIKVE
>NZ_LR698998.1|WP_038572553.1|4865958_4868580_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVKNEVAAQVKQTTAEEYIQTLVDKAKKAHEAFMALDQEQVDTIVHAMALAGLDKHMYLAKLAVEETGRGVYEDKITKNIFSTEYIWHGIKYDKTVGVIEDNAYESFQKIAEPVGIVMGITPVTNPTSTTMFKALISIKTRNPIIFGFHPSAQECSAAAARILHDAAVKAGAPENCIQWIEMPTMDKTNALMNNPDVALILATGGSAMVKAAYSCGKPALGVGPGNVPAFIEKSADIDQAVTDIILSKTFDNGMICASEQAVIIEEPIFDQVKKKMIANGCYFVNKEEAAKLTSGAMNVDKCAVNPAIVGQSAVKIAEMCGIQVPAGTKILVAELEGVGTKYPLSAEKLSPVLACYKVKNADQGIERAAQVVEFGGMGHSSAIHSNNEEVIMKFSNRLQTGRILVNSPSTHGAIGDIYNTNIPSLTLGCGSYGRNSVSQNVTAINLINVKRVNRRTVNMQWFKVPDKIYFEKGATQYLTKMPDITRVAIITDPMMVKLGYVERVEHYLRQRQTPVAIEVFSEVEPDPSTTTVEKGTAMMNRFQPDCIIALGGGSPMDAAKGMWLFYEHPDADFNGLKQKFMDIRKRVYKFPKLGNKAKFVAIPTTSGTGSEVTSFAVITDKTTEQHTKYPLADYELTPDVAIIDPEFVYSLPKTAVADTGMDVLTHAIEAYVSVMASDYTDGLAIKAIQLVFQYLEKSALEGDRVAREKMHNASTLAGMAFANAFLGINHSLAHKWGGQYHTAHGRTNAILMPHVIRYNAKKPTKFASFPKYSHFVADERYAEIARILGLPARTTEEGVTSLINAIRDMNKKLGIEESFQQLGFDPKDFESRVDYLADRAFEDQCTTANPKLPLVSELADVYRNAFYGRFDN
>NZ_LR698998.1|WP_036682923.1|4863444_4865706_-|formate-C-acetyltransferase
MSVIEKDVQEVKSGWRSFTKGKWSRKVDVNNFIASNIKPYEGNEEFLVGPTSNTTELWKIISQLSKEERERGGVWDVSLDTVSTITSHAPGYIDKDKEQIVGVQTDAPFKRSIQPFGGIKMMVDATKAYGFELPQNIVDMFTNIRKTHNQGVFDAYTPDMRAVRKSGVITGLPDAYGRGRIIGDYRRIALYGIDFLIKDKKQQQTELEVDSMTEDIIRLREELSEQIRALGELKEMAAAHGMDISRPATNFKEATQWVYFGYLAAVKEQNGAAMSLGRVSSFLDIYAERDIAEGTLTEEQVQEIVDHFVMKLRIVKFLRTPDYNDLFSGDPTWVTESIGGMAEDGTTRVTKNSFRFLNTLYNLGPAPEPNLTVLWSEKLPEAFKKYCAKVSIETSAIQYENDDVMRPYWGEDYAIACCVSPMRIGKQMQFFGARANLAKALLYAINGGIDEKSGAQVGPEFPAITSEYLDYDEVMKRFKPMMEWLAKTYVNTLNIIHYMHDKYSYERIEMALHDRDILRTMACGIAGLSVAADSLSAIKYAKVKPIRNEQGIAIDFETEGEFPCYGNNDDAVDSIAVELVETFMTMIRKNKTYRDSVPTQSVLTITSNVVYGKKTGTTPDGRKKGEPFAPGANPMHGRDKKGALASLNSVAKLPYSDAQDGISNTFSIVPKALGKDEDSRKSNLVHMMDGYFHNNAQHLNVNVFNREQLMDAMEHPENYPQLTIRVSGYAVNFIKLTREQQMDVINRTFHGSM
>NZ_LR698998.1|WP_111504987.1|4862490_4863228_-|pyruvate-formate-lyase-activating-protein
MIKGRIHSLETFGTVDGPGIRFVLFMQGCLLKCQYCHNPDTWALDEGKEMTLEEVLSEIEPYINYYRSSGGGLTVSGGEPTLQAQFVKQLFTEVKKRWNLHTTLDSNGYNEGDKINDLLDVTDLVMLDLKHIDEEAHIKLTGKSNDRTLKLARWLSDHNRKMWIRHVYVPGIHDREEDLINLGRYIGTLTGVEKFEILPYHQMGIYKWEMLGKAYELDGVPSPTEEEVQRAYRLVEEGRKQTALV
>NZ_LR698998.1|WP_036682919.1|4860646_4862053_-|extracellular-solute-binding-protein
MKKSMTLLLSLIFVSSALLTGCGGNNNESSNKGDGNATATNSAATNAPATEEPVNNEPFEMTIRHTQIGADKQKRLAILEEVVNKVQEDVPGLTFKLDGVDSDVNRKEKLRGEMAAGNPPEIFDLFGSPDSKIYAKEGKLLDLTPILEELGIKDKFSNLDPFTYEGKIYGLPIGGSGEGFFYNKEYYTSKGWKAPTTFAELEQQLADIKADGKVPLAGASKAGWVPLMLANHLWSRYAGPDVTAKFATGEAKWSDPNVVKGFAKYKEWVDKGYFKKGELGFEYAEYTTQFTSGEAILLYDGTWKSSVFKTGQSGEGLIGKVGFFNIPAVEGGAGDQTALMRDVNNGYGFSASAEKDPRQLAAVKSFIKNLFNEEMQLRGLVEDGVLPAMKIDQNVLNENITDDLMSEIVGVLNNSQSSFPAFDSLVQADVTTEISNIQIQKLIGDQTTPEKMGEALQKVQEEANAAVE
>NZ_LR698998.1|WP_036682917.1|4859633_4860518_-|sugar-ABC-transporter-permease
MNKALRNPVVFFLFVLPALILFTMFFIYPIFSSIYYSFTSWNGVSETVKSAGLSNYEKALGDERFWISVKNNGWFILFSVCIQVPLIVFFSLLISNVKKLKGLYKTAVFMPSIMSTAVIGILWGFIYEPNIGLFNKLLSLVGINPIYWLSDERFAMLSILLTNAWQWTGFYIVMVLAAILAIPGELDEAAAIDGATGFQRATRITLPLIVPIISVVIMLSIAGAMKAADIVIVMTKGGPAGSTDVMATYMIKYAITNFKYGYGNAIAVLIFAFTLVVTVLYQLLIARRTERIEY
>NZ_LR698998.1|WP_076134520.1|4876960_4877599_-|beta-phosphoglucomutase
MLENMKGAIFDLDGVIVDTAKYHYLAWASLADELGFKFTEEDNERLKGVSRMRSLDILLEVGGLEFKEAEKLAMAEKKNRLYVEYISRLEESELLPGVKEYLTGLRSRGIGIALGSASKNAEFILNKLNITDLFDAVVDGNKVSLAKPDPEVFLIAAQEIGLQPDECVVFEDAEAGVQAGKAAGMKVVGIGKPEVLKEADLVVKGLYELLTD
>NZ_LR698998.1|WP_111504989.1|4877631_4879914_-|glycoside-hydrolase-family-65-protein
MNWTVKDSCFDKQLVTTNGNKYMLGNGYMGYRGTLEEFSKTELVAVTLAGLYDRAGDKWREPVNAPNGLLTKIFCNAQLLSVLDREPVAHTQELNIRNAIHHRSTEYAVPDGGTLTFTAERFVSQDNLHLLVSKYSIRSTQDCRVAIETGIDVDVWDINGPHLYGQTVQLKDEVLISSSVSGELKIPVVVAERAVFSFGEEQLEDGAAVRRISFDARAGETYEWFKYVAVYTGLDADQPETEAVKSVHAAEALGYEALFKAHRLIWDERWSHSDVIIEGDEAAQFALRYSIYQLLIIAPTVSEKVSIPARGLSGQVYKGAVFWDTEMFMLPFFLHSDPKVARNLMMYRIHTLDGARRKAAEYGFLGAFYAWESQDTGDDACTLFNVNDVFTGRPMRTYFRDKQVHISGDVVHGIWKYVQFTGDESLLTSGGAEVIWECARFFYSYAYYNSVKQRFEILDVTGPDEYHERVNNNAFTNALVKETLEIALHTAALLQEKYPEDYGQLSAQFSSGPFLEEFKTMLDSFYVPQPDPASLVIEQFDRYLTLEDVELTELKSRVLNKNEYLGGGNGLATTTTILKQADVVLMLNLFKHSFSKEVKQANWEFYEPRTEHGSSLSPCIYALVAADIGSPDWGYPYFMRTATVDLTGESKQYVGDLYIGGTHPAANGGAWMAAVLGFAGLDYAGGVVHINPSLPQHWQSVQLPVTLRGDTIQLRISKDEVTVITAADYSGDLVFSVQGGEGKSCSAGEILRLGFDETGL
>NZ_LR698998.1|WP_111504991.1|4879910_4882217_-|family-65-glycosyl-hydrolase
MAKVADKYLKVDPWAIIEEGFDPERNRTSESIFSLGNEYMGVRGYAEEGYSGDTLQGSYFNGLNEQLDIGNHYKGIIRSLRYMVNAVDWLYTRLSVEGEQLDLAKSNVTDYVRRLDLRKGTYRRELVWHLNDGKSLKVVFTRLVSMTMSHLGLQRVDFEPLNFSGSVDICTGLDFGIIHEERGECMWNSLRSGVSGASSAIMASTVNTGNKLFSSFTLQSSQPLQLTAVESDKFIGQNFTLDLTEGEVSYFTKLVMNYSDSDSAHTAEELWSKGLSLAETASQLTDTQIIADQTAYWKGIWETSDIRIEGDPENQQGIRFCIFQLYQTYHGDHPGFNIGAKGLTGEVYRGLAFWDTESYCLPFYMFNNPKAARSLLEFRYKTLPQAMQRAKEVDCEGACYPIATIDGTESCDLWQHSNLQLHVGTAVSYGIWHYVKNTGDKSFLHSKGAEMLIQISRFYATRGQWGQRSGEYGYFGVMGPDEFQLMVNNNCYINLMAQQSFEYTLGTLREMKEQAPAAFAAVVEKTGLHDEELTDWDNKAQHMRIPVDEVTGVYEEHDGFFDMPHIDIHSIPVTEFPLYSNWSYDRLYRYDMIKQPDVLMFMFLYSGQFSKEAKLANYEYYEPRCIHESSLSPSIHSILASEIGKPEEAYSFFEFATRLDLDNYNRNTREGLHTTSIAAAWMNIVYGFGGMRSDGARLSFQPTLPERWDEYSFQVLYEGVLLRIVIDKKSVTITAVNGGSTEIIVYGQSITVDASGKTLPLGEGMLAG
>NZ_LR698998.1|WP_036682945.1|4882639_4883365_+|Crp/Fnr-family-transcriptional-regulator
MLKEHYNVIEAHGNTNCFSEQNFNRLLVTMKERIVPEGSHLFWEGDYSDKLFYIKRGRVKLTKSTDEGKELILYMYQAGDMVGQADPFFSTKHSFTAEVIEESEVGVIEQKDLEILICQHCDFAIDFMKWMGIHHRLTQTKFRDLMMYGKPGALCSTLIRLGNTYGEKSSDGENILINKKITHTDLSNMIGATRESVNRMLSDLRKKDAVEYENGMIVIKDLGMLQEICHCELCPNEICRI
>NZ_LR698998.1|WP_076130683.1|4883544_4884336_-|formate/nitrite-transporter-family-protein
MFTQSVESIVETAVSKRDKMNESLPRYFLAALLAGAYVGIGIILIFSLGAPLAAAKSPFQPLIMGTSFGIALTLVVFAGSELFTGNNMFFTVSTLAGRTSIWDTVKNWILVFIGNVVGAVILALLIRGTGLFSAAPPEHLIFTAAAKKMSLPFSELFFRGILCNWLVCLALWMSSRAKSESAKLILIWWCLFAFIASGYEHSVANMTLLSVAVLLPNHPETITIAGWLHNMIPVTLGNIIGGGVFVGMAYWVISPVRGARNNR
>NZ_LR698998.1|WP_076130684.1|4884388_4884709_-|nitrite-reductase-small-subunit-NirD
MNKTTQTYAIGSVQDFLLQIGRVVIAGNVELAVFRASDGAIYAVENRSPHPKGGPLAEGIVSGHYLYDPLYDWKIDLRTGEVQAPDQGSVVTYPVTLDGEKVTVSV
>NZ_LR698998.1|WP_111504993.1|4884741_4887165_-|NAD(P)/FAD-dependent-oxidoreductase
MAAKREKLVLVGNGMAGIGTLEQILKLGGAYDITVFGSEPHPNYNRIMLSYVLEGSKTINDIILNDWNWYEDNNITLHTGTKVTRIDEHSKQVIADNGMAVSYDKVIIATGSNSFILPVPGCDKEGVVGFRDIADCDAMLAAAKQYNKAAVIGGGLLGLEAAKGLVNLGMDVTVVHLMEDLMERQLDRNASSMLQAELERQGVKFATGKQTVELTGEQRISGLQFSDGTSLAADFVVMAVGIKPNVTVAKESGIAVNRGIVVDDYLQTSMQNVYSIGECAEHRGVCYGLVAPLFEQGMVLAKHLCGSDTNPYEGSVVSTKLKISGVDVFSAGEFMDSPEHTVISSKDEWKRTYKKILLKDNVIVGAVLFGDVTESASLQKLVKQGAVMTDEIYTEVMGTGCCGSGAKKSTSVEAMADEEIVCGCNGVTKKAIVDAVIENGFTTVDEIKACTGATRSCGGCKPVVEQILQFVLGDSFEQSAKQGICSCTTLSRDEIVAEITAKGLSTTKEVMHVLGWKQEEGCSKCRPAINYYLGMINPDTHQDEKESRFVNERMGANIQKDGTYTVIPRMYGGVTTPEDLKKIADVSLKYDVKVVKVTGGQRLDLIGVKKEDLPKVWEELDMPSGYGYAKSLRTVKTCVGSQFCRFGTQDSLGMGALIERKYERLDFPAKFKIAVNGCPRNCAESCTKDIGIVGNDGGWEVFIGGNGGIKPRIADSFCKIKTDEELIEVCSAVMQYYRETGNYLERTSEWVERMGLEQIQMVILNNEDNRKELAARIDFALTQVTDPWKKMLNDSSTRTALFEETRV
>NZ_LR698998.1|WP_111504995.1|4887396_4888107_-|hypothetical-protein
MPTKYMWRLLLGIVIVFIIGGCSTLADVNNEGNNGLAGSDGPALSLIVAGNDLLTNPLDKQLSESYRKGITIFDLLKGSGKATFSEDNTSILAVNNISLGPGMNWELQMDGETIGPEDWGRTVGHESKLVITAMSKEHQEPLQIVMLTVNGGSEQVNLNHSYVMGFTEDLTVRGLLKNSSVVQLTEDNKKVLSIGDYTPLSNEVWKMKVNGKQLLENGMDMKLRVQDELEILLAIR
>NZ_LR698998.1|WP_076098662.1|4888257_4888953_-|iron-sulfur-cluster-repair-di-iron-protein
MQPGFTPDALVKDIVLQFPKAADYFKSKRIDFCCGGAKPLAEAAVERGLDQEMIISDLNKLFEEYPVPQEELAWNTAPSAELIDHIVSKHHHYLREELPLISQNVTKVYRVHGGDSPHLEELYSLFNTLKEDLLQHTAKEEEDEFPKLLAYDANPSEEGLTILREALVDLESEHDTAGDILRQIRKITDDFTPPAHACTTYRLTYARLEELESMTFEHVHLENNILFPRFQ
>NZ_LR698998.1|WP_076204958.1|4889599_4890325_-|hypothetical-protein
MKTTLFSREITYGKKDVAELENASIKVQLIYDKTLFMLHSHLPDSLWDAWIGVPYSIISSLYKGNNDSGTIFQKWIQSPSGWKCIGCERHCLESTEPLQEVNVASNQRQYKFHNGIRQSMVLQALIWSMYENTVLFKPFLGDEPFFDEDDLHTISSYFVPTYLNDLRLLEQSKPCKEYKDQNIQIYQEWIAAPDLVLKWNGGLTEGRWMTGVYMDHSRFAGLGPYLKDAKGKRTYMQAYVQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_12

5284177-5284266

Orphan

Consensus_repeat	Method
AGTTTTGTAAGCATACACTTCCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_12

>merge|NZ_LR698998|12|5284177-5284266|CRISPRCasFinder
AGTTTTGTAAGCATACACTTCCATGAATTACTTCGAACAAAACTCACTTCGAAAGCGGCTGCTTAGTTTTGTAAGCATACACTTCCCATG

>NZ_LR698998|12|12|5284177-5284266|CRISPRCasFinder
AGTTTTGTAAGCATACACTTCCATGA	ATTACTTCGAACAAAACTCACTTCGAAAGCGGCTGCTT
AGTTTTGTAAGCATACACTTCCCATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076137387.1\|5292799_5293918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_172628853.1\|5288762_5289050_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036677511.1\|5279185_5281000_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_LR698998.1\|WP_076137378.1\|5281661_5282999_-\|stage-II-sporulation-protein-P	unknown	unknown	gnl\|CDD\|377838
NZ_LR698998.1\|WP_111505293.1\|5275122_5276427_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_LR698998.1\|WP_111505295.1\|5276522_5277290_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_LR698998.1\|WP_111505297.1\|5283155_5284157_-\|GPR-endopeptidase	unknown	unknown	gnl\|CDD\|235078
NZ_LR698998.1\|WP_036677521.1\|5284462_5284735_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_LR698998.1\|WP_076105906.1\|5273255_5274083_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LR698998.1\|WP_076137382.1\|5286714_5287977_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_LR698998.1\|WP_038572952.1\|5289236_5289878_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|180618
NZ_LR698998.1\|WP_076137375.1\|5277274_5279095_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LR698998.1\|WP_111505299.1\|5284893_5285382_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036677502.1\|5274146_5275013_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_LR698998.1\|WP_036677525.1\|5285418_5286438_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_LR698998.1\|WP_036677530.1\|5287973_5288522_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182012
NZ_LR698998.1\|WP_111505291.1\|5270960_5273237_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_LR698998.1\|WP_076137385.1\|5291710_5292727_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_LR698998.1\|WP_076137384.1\|5290224_5291175_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_LR698998.1\|WP_076185487.1\|5281140_5281626_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_036677511.1\|5279185_5281000_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_LR698998.1\|WP_076137378.1\|5281661_5282999_-\|stage-II-sporulation-protein-P	gnl\|CDD\|377838	pfam07454, SpoIIP, Stage II sporulation protein P (SpoIIP). This family contains the bacterial stage II sporulation protein P (SpoIIP) (approximately 350 residues long). It has been shown that a block in polar cytokinesis in Bacillus subtilis is mediated partly by transcription of spoIID, spoIIM and spoIIP. This inhibition of polar division is involved in the locking in of asymmetry after the formation of a polar septum during sporulation. Engulfment in Bacillus subtilis is mediated by two complementary systems: the first includes the proteins SpoIID, SpoIIM and SpoIIP (DMP) which carry out the engulfment, and the second includes the SpoIIQ-SpoIIIAGH (Q-AH) zipper, that recruits other proteins to the septum in a second-phase of the engulfment. The course of events follows as the incorporation firstly of SpoIIB into the septum during division to serve directly or indirectly as a landmark for localising SpoIIM and then SpoIIP and SpoIID to the septum. SpoIIP and SpoIID interact together to form part of the DMP complex. SpoIIP itself has been identified as an autolysin with peptidoglycan hydrolase activity.	5.62562e-92
NZ_LR698998.1\|WP_111505293.1\|5275122_5276427_-\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.00328e-42
NZ_LR698998.1\|WP_111505295.1\|5276522_5277290_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.65931e-43
NZ_LR698998.1\|WP_111505297.1\|5283155_5284157_-\|GPR-endopeptidase	gnl\|CDD\|235078	PRK02858, PRK02858, germination protease; Provisional.	1.77064e-176
NZ_LR698998.1\|WP_036677521.1\|5284462_5284735_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	3.8903e-23
NZ_LR698998.1\|WP_076105906.1\|5273255_5274083_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.39804e-86
NZ_LR698998.1\|WP_076137382.1\|5286714_5287977_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	5.35779e-08
NZ_LR698998.1\|WP_038572952.1\|5289236_5289878_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	gnl\|CDD\|180618	PRK06552, PRK06552, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional.	1.68797e-108
NZ_LR698998.1\|WP_076137384.1\|5290224_5291175_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.22768e-104
NZ_LR698998.1\|WP_036677502.1\|5274146_5275013_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.80276e-79
NZ_LR698998.1\|WP_036677525.1\|5285418_5286438_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	4.14823e-80
NZ_LR698998.1\|WP_036677530.1\|5287973_5288522_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	5.92602e-47
NZ_LR698998.1\|WP_111505291.1\|5270960_5273237_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	3.01333e-132
NZ_LR698998.1\|WP_076137385.1\|5291710_5292727_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.10636e-102
NZ_LR698998.1\|WP_076137375.1\|5277274_5279095_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.28841e-37

>NZ_LR698998.1|WP_111505297.1|5283155_5284157_-|GPR-endopeptidase
MEPDLQLYSVRTDLALEAKEMAQGPQRTPIPGVNEEVEESDGIKVTRLGVANAAGSQAIGRAIGNYVTLEVPALRGGDTGLQQKVAEVFAREFEDFLIRIGIGKDASVLIVGLGNWNVTPDSLGPLVVENSLITRQFYELVPDQLSPGYRKVSAIAPGVLGLTGIESSEVVQGIVDRTKPELIIAIDALASRSLERINTTIQIADIGIHPGSGIGNKRRGLTQEILGVPCIAIGVPTVCYASTIVNNVLEMMKNHFGQGANHTKEIMGMLDDISEQERLSLVKEVLEPLGHDLIVTPKEIDEFIEGIANIVASGLNAALHDAVDPENVGAYTH
>NZ_LR698998.1|WP_076137378.1|5281661_5282999_-|stage-II-sporulation-protein-P
MNKKWFQLWNIGRLRGKMLDVLSLGRTMLLLAGGSLVFFMLLGAGGLAGQKLNSSPIPSMKGLAASLSSGFFMELLGMEVPHLPQGKEPSAFSGEKVTSFVFQLLTSVNPGDPKSLVSREVPGMAADDPFLLRKGSGGSTGAPVDYHPGTDELAEGSGDAETSVPDEGDKHGDTTTQQPEATVAPSPDPSAEEGTDKSDPQSGTDSTKDTSIKRILIYHSHPREAYNPLLGAANENPSSGVSTKNVMLVGSYITKRLEQLGIGTVHAKEDFPTKIADYNWNFSYKYSRILVKSALSANEEMDSFIDIHRDSQRHSKTTAVIDGKSYAQVYFIIGHANKDWKKNEEFANKIHQQLEKNYPGISRGIWGKAAGKGNNGEYNQTLSPNSVLIEVGGIDNSAEELKRTADILADAIADVYWSSHDAEKVNAPEKVANPTTTPKKSNGAS
>NZ_LR698998.1|WP_076185487.1|5281140_5281626_-|hypothetical-protein
MSRFGKKLVMVGIWAGIGILLGMQFGGSGGSTVSKILPGWNASPTTPTSQVTGMQPQPQLQKNGVTQGGQTYVYVPMVIDPVTGAYTAVSPLPQNSNTTPAADPPQQVVDDYSTKSPEQILIPEEQKPTVDVLADKTAGLLQQASQKGIRWVVSLFASAEN
>NZ_LR698998.1|WP_036677511.1|5279185_5281000_-|elongation-factor-4
MTDVQKRQQQIRNFSIIAHIDHGKSTLADRILEYTGALTTREMQEQVLDQMDLERERGITIKLQAVRLTYRADDGVEYYLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYLALDNNLEILPVLNKIDLPNADPDRVKQEIEDVIGLDTSEAVMASAKAGIGIKEILEQVVKQVPAPSGNSEEPLKALIFDSHYDPYKGVIVYVRVMDGKIRAGSKIKMMATEKTFEVIEVGAFMPRMTIVDELNIGDVGFIVAGIKHVGDTRVGDTVTDAKNPTAEPLPGYRKINPMVYCGLYPIETSDYNDLREALEKLQLNDASLSFEPESSSALGFGFRCGFLGLLHMEIIQERIEREFNLPLITTAPSVIYRIMLTNGEMIQIDNPSHYPEIGTIDYIEEPYVKAAIIVPNDFVGTVMELCQNKRGEFVNMEYLDTNRVTITYEIPLSEIVYDFFDQLKSGTKGYASYDYEICGYRRSNLVKMDILLNNEQVDALSFIVHRDRAYNRGRIICEKLRGIIPRQMFEVPIQASVGTKVVARETVKAMRKNVLAKCYGGDISRKRKLLEKQKEGKKRMKQVGSVEVPQEAFMAVLKIDE
>NZ_LR698998.1|WP_076137375.1|5277274_5279095_-|sensor-histidine-kinase
MRRVLVKRLYLKLTPSTFKNRILLAFLLLVLTPIAILVLYNFKETERMLQDNAETKNIEQLIGIKNGFVDLMSLVMKTGSLLEQDTTILSIMKNPEQSDEITRKKLVENKFGAIENTFFMSGATVYYTLIDLHGNAYTSFMPKETLSYDEIQSEDWVQALKREGTNRYIWNPNDKNNVVRESTTSKKMLSLYEVMRDNDLNIYAYARLSIDYEEWFTRSTLGSKQEGALFLLDALGGVMLNPLKDEAFSSDIAQSIVKSANQRQTGRAASIVNPKEESLYTYSYIEELNGYVVKKVQLAQLFLEVDKQKRRFFGGFGIILLLFVLLTYFISSTITVPLKKLQKKMEMTAKTNLKMKLPEQGRGEILALTQSFNIMIHDLNELLQRLQLEEKQKQFVRFQVLLSQMNPHFLLNTLNTIKSIALDKDDDEIYEICVALGKILETTLNTEVDLILLKDEIVLIESYMEIQRQRFGHGIEIQYDINEELQFALIPKFCLQPLIENSLIHGFGQSVKQGRIDISAKVTEQQLYLQVRDNGMGIERAQLNKATRKRKGIGVQNIRESLELLFKNQRTGMDIVSSDTGTEVTIHFPFLISKPYDGGKLTCGER
>NZ_LR698998.1|WP_111505295.1|5276522_5277290_-|response-regulator
MWRTLIVDDEQPAVKSIRKLFLKAGIPFEIIGEAENGEVGLQMIRELQPDVVVTDINMPVIDGVKLLQIAREEGFECRFVMLTALSEFEYARQALVFGASDYILKLSLDLQGLKQTMGKVQTELERMVKMKKADKWFPEKQQTGPTDHVEMNKIIAYIEEHYAEDISLKSMSELIRMDASYISDLFKKKTGKTLTNYIQERRIQAGKMLLAETKLTISEIGQQVGFENDNYFIKIFKKWCGVTPNEFRKEPKNVL
>NZ_LR698998.1|WP_111505293.1|5275122_5276427_-|extracellular-solute-binding-protein
MKKKWYPAVLSVLLAGTMLAGCGSGGSNEAQGSANEETAKEKIKLTMWGAVPAEAGPQAVIDNWNKDHPDIQVEYIRNVNDDAGNLKLDTALMTNQNIDLFMNYDLAHLQKRMDAGVALDLSTKTDYDIDSQIGEDAAMWKINDKYYGIPTKKNMAFVWLNKDMLDAAGLPIPAVDWTWSDLEEYAKKLTKPGVYGLLQADSSFSTTMDGTLAGMGVKQADGTSNFGNDLWKQHLEILHNMMFVDKSTPEYGEQLTSKMPVDTMFLQGKAAMLAAGEFIFRNANNLKDYPHDFKTAFAAIPKVNKDQKDYKYSGGVGDMLALNAKSKNLDAAWEFAKWYADGGMLPMASGGRIPASKSVDSKEAMSLLLNGVEDKYDTDSMNNIVFGKFPSFQLNVPQQAIDARKEEYEKYFLNKQDIDTTMKNMQTRSQELMK
>NZ_LR698998.1|WP_036677502.1|5274146_5275013_-|sugar-ABC-transporter-permease
MDRQGWIGMTFILPNMIGILLFFVIPAIFSFVLMFTNYQFSNPNWQFTGLDNLKRLFHDDNFYASIKYTVIFLISVPVSMVLAFIVALFLNRSVYLKGVLRGMFFLPYISSGVAVAFVWMLLFQPSQGPINELLRWIGITSPPGWFADTETAMYAIDIVQIWLMLGYNMIIYLAALQEISTEQLEAARIDGASTFKTTWKIVWPLVSPTTFLLMITGLIMTMKSFSIIQAITAGGPSGSTTVLSLFVYKTAFSYYDMGYASVISWFLFAVILVITVIQWIGQKRWVHY
>NZ_LR698998.1|WP_076105906.1|5273255_5274083_-|carbohydrate-ABC-transporter-permease
MNEKAGNMKVKLPVTIIMFVLGLFMIVPFLWMLSTSFQTPAEVFNEWLPSSLNWSNHIRVWTGSYDFVPYYLNSLKISIIGTAGAVFLSALAAYGFSRTSFKGRDGLFVIYLSMMMIPPQVLFVPKFIMFNWVGIYNTHLALILPAMFSIFGVFMLRQFFMGIPKEITESAFLDGAGHYKIFFRLILPLAKPAIATFAILDFSWQWNDYENALVFLQSPKLYTIPLGLQNFILENNVDYNGMMAASSAAIIPMIVIFFIGQKYIIQGISSSAVKG
>NZ_LR698998.1|WP_111505291.1|5270960_5273237_-|FAD-dependent-oxidoreductase
MRTETVKSDVTVVGGGLAGMNAAIAAARLGLKVALVQNRPVLGGNSSSEVRVWVCGATGHGVNRYARETGIMGELFIENQYRNPEGNPYLWDLTLLEAVKAESNISLFLNTDVREVEAEGEAEERTIQSVTGWMMGSERLITFESGAFIDCTGDGLVGFLAGADFRLGREARHEFNEEWAPEVPDNITLGSTLLFYTQDTGKPVRYVAPSFAKDITTTSIPIRRVIRSGDSGCHYWWIEWGGELDTVDENERIRDELSSVIYGIWDYIKNSGHFDAENMTLEWVGSIPGKREYRRFVGDTILTQNDILAQREFADRIGFGGWSIDLHPPQGMYAQESGSKHLHADGIYHIPFGSLYSKNVRNLFFAGRNISASHVAFGTTRVMATCAIMGEAAGTGAALSVIKGVTPREIREQYMHELQQVMLKQDASIIGLRNEDPLDLARKSEIHASSTMNGILLDRPAEAYELSHDVGILFPVEGSIRGLRLLVSASIQTQLTVEIWTTGRAENYVPAECKQVDVITVQAGEQQWIEVPIQEEKCSPIGECNIFAIIRANEHLQLHISETPITGVITFERGAKSVVDSSLEDHQPDQPVIEWSMKQLVRRHFCFAVETSAYAASKVIDGYVRPFAGPHSWVSEPMTAGRSEWVEARLPDAAPVSEIHFTFNDDVNEDLINLHHHETPFLVIPELVKNYDVELLIDGAWQVMLRVKDNHRRKNVHRLEKPVLTDAVRIVIHETNGGVHAELVEMRIYQEATALPTL
>NZ_LR698998.1|WP_036677521.1|5284462_5284735_+|30S-ribosomal-protein-S20
MPNIKSAVKRVNTNEKRRALNASQKSALRTAVKTADVALTGTEVETAQAAFLAASKKLDKAVSKGLVHKNAAARKKSRLAKKLNALTAQA
>NZ_LR698998.1|WP_111505299.1|5284893_5285382_-|hypothetical-protein
MKRIFHYSALLLLVLLITSCGKTDTNSPSGSASESSVNTNTSADAPSYFGEWSVHSIVGSTPVSAAEDEKLIGMRVTYSIEKASFDKDEIMSPEYKEENITKDDFFNDYRNELSDLGIETESVKTVSINNWTNPGSSFIVKDDQTMIFLWDGNYYEMKKENK
>NZ_LR698998.1|WP_036677525.1|5285418_5286438_-|DNA-polymerase-III-subunit-delta
MDAKTAIKEIKQGKISPLYVLYGSEKFRMNEFTALLEEQLIAKEDRDFAVIPFDLSETPVQAVVEEAETVPFMVERKLLLVRDASLFTAGKENAKLEHRIDLLSDYLQHPVDFSVIVFMVNNDKLDERKKIVKTVKSVGTVLAFNPLGAEELLRWVEKGIRERGCVMAPGTAEILITNAGTGLQGLSAEMDKLCLFAGKGGTVDAGAVESLVHRGTEQNVFTLVEDIANLRLDKALDTLYELLKQREEPIKIAALVARQFRIILQVKDLSAHSYSQGQIASQIGLHPYAVKLAGEQAHKFSSERLRQILSALADLDYKMKTGAIDKVLGLELFMLRLGV
>NZ_LR698998.1|WP_076137382.1|5286714_5287977_-|zf-HC2-domain-containing-protein
MKCAEVMEWMHRYLDKDLSQDEIIEMFRHIDNCPSCAEVFERLTLLSNELEQLPDVKPPFSLVDSILPQLAELDRSSREQSAVRSEEPVVVPFSRESSRGKPSKGTSIATRTGIGAIAAAVLLGIAIFNMPDKMPGAEVEQRMQDSAKTASDDTKDTAMESQASITANSDGASPAAGGENEGAAQFKTDAPEMNEDNAALDRATGPVDPASMPSAPADAADAGAGAGGRSITEPPQSADPKPTEKIAPPRQDVATKSHNSDSSNASSNQLKVDNKEQTADMNSDSAADSAPLMEDSLKIPYDYGREVMSLSSSEDPNVQTWTSPDGQYAIEFVGLQLVIYKKSPEGSAEERLAVNSYPLEGNWISGEWSADSSKFTYVTEKDGVNVTKVYTVQEAATASSSPAASPGATPTNTPTSSSTN
>NZ_LR698998.1|WP_036677530.1|5287973_5288522_-|sigma-70-family-RNA-polymerase-sigma-factor
MVEQGLIRAAQAGDRDALITLLREIEGHVYKTAFYILHNEQDALDASQEALIRVYTKIGSYEEKAQFKTWVQRIVTNICIDKFRRTKPTVSIDEHEMVFQDKHNVEREVLSSYLAEDIREAIDQLPEHHRTVIVLRYLQDFSYNEIADCLDLPLNTVKSYLFRARQQLQNRLQEYQKGGVSG
>NZ_LR698998.1|WP_172628853.1|5288762_5289050_-|hypothetical-protein
MIHGLNVRIYYPAGSEYMPAYNDKKLYQAADEDDAEYVEIESAFHGCKVTEGQIYRLERNYNNPQLFENGEAYVVDDETRENYAVFMLCKIALYK
>NZ_LR698998.1|WP_038572952.1|5289236_5289878_-|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase
MKKMKVLQNVASVGVVAVIRADSAEEAFKMSVACIEGGLNNIEVTFTTPDADVAIKRLVAEYGSRAVIGAGTVLDPLTARIAILAGSEFVVSPSFEVETAKMCNLYGIPYMPGCMTLNEMKEALKYGVDVLKLFPGSAFGPDYVKAVKGPMPHVNIMPTGGVDLNNMEKWIANGCMAVGIGGNLTAPAKNGRYDQITDLAAQYVAKFKEIKGI
>NZ_LR698998.1|WP_076137384.1|5290224_5291175_+|sugar-kinase
MSKQLDAVTFGEPMAMFYANEAGPLHEVFSFSKALAGAESNVATGLSRLNHPTGYVTKLGEDNFGAFIAQAMKNENINTDNITFTKEHSTGMLIKSKVVTGDPKVEYFRKNSAASTLSLEDFDEAYFNFAGHLHVTSISAALSKSCHEFSIHAMEFMKSKGKTISLDPNLRPSLWPDTETMVSTINDLATRCDWFLPGLGEGKILTGLSTPEEIADYYLERGVSLVVIKLGPEGAYYKSSAGEGYVDGFKVERVVDTVGAGDGFAVGVISAMLEKLPIAEAVKRGNAIGALAVMSPGDMDGLPTREELAKFMQQEV
>NZ_LR698998.1|WP_076137385.1|5291710_5292727_-|LacI-family-DNA-binding-transcriptional-regulator
MKKLTIDDVAQKAGVSKSTVSQFLNKRFKYMSEATKNRIEAVIEELNYQPNGLARSLKQNRTHMVGIIVANIDYTLSIQCIRAIENELQHHGIQVIICNADENAEKESKYVETLIARQVDGLIIFPTGNNPSAYSKLIEADFPLVFMDRLVDGITTQSLLLDNEMAAKIGVGQLIQQGHERIALVSLPIGEHAITPRKERISGYKKAMEEAGITLRGEYICSVSKEELATGLEHLLALPEPPTALLATNDITLAEILKYANRNAISIPEQLSVIGIDDAEFAQIYNPVITTISQPAYEMGMQAAKIILSCIEDKGASVPITYRFPPTLQQGQSVKSYK
>NZ_LR698998.1|WP_076137387.1|5292799_5293918_-|hypothetical-protein
MKRNEDDSNPVMIGQTDWYAQAGKRPFIEDGFTPELMMRIEQAAANKSSGYKRYWMNKNVVLTSLVTILLIGSLTFPMGIWKNTGPVHSSSVQSQGAGILPSSSPATNDKALEPPTSPVEFEINGKKYYMPLPMNRDKSKAYAVETTAGILWSPPPPMVDYKKPKYTHPTEPFTLYLSSKDQTELSASSATRIYTLPLYAGGASTYQYLSGFFGAGDYALLFTYTKTIGSGIMENGRFFILNVKKAATGESVVPKELTSFDWELLEYKSIIAVDKEHDQIVFSYLEYPVDKTYRDKTVLYDMETLSIQTPASTIGFRDIDGQSLTMEYEMNGELCKADILTKGGPGWIDEDWAFLSEERQNELYQEFYSQTP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_13

5296972-5297073

Orphan

Consensus_repeat	Method
GGTGCTAGAAAGGACAACAGTTAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LR698998_13

>merge|NZ_LR698998|13|5296972-5297073|CRISPRCasFinder
GGTGCTAGAAAGGACAACAGTTACTGCATTAGAGCAGTAGGTACTAGACAGCACAACAGTTACATACTTAGAGCAACTGGTGCTAGAAAGGACAATAGTTAC

>NZ_LR698998|13|13|5296972-5297073|CRISPRCasFinder
GGTGCTAGAAAGGACAACAGTTAC	TGCATTAGAGCAGTA
GGTACTAGACAGCACAACAGTTAC	ATACTTAGAGCAACT
GGTGCTAGAAAGGACAATAGTTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_111505301.1\|5297555_5300231_-\|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl\|CDD\|273036
NZ_LR698998.1\|WP_036677560.1\|5307182_5307704_-\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|226398
NZ_LR698998.1\|WP_081389105.1\|5294588_5296562_-\|glycosyl-hydrolase-115-family-protein	unknown	unknown	gnl\|CDD\|379757
NZ_LR698998.1\|WP_076137387.1\|5292799_5293918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_038572952.1\|5289236_5289878_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|180618
NZ_LR698998.1\|WP_036677553.1\|5305711_5306779_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_LR698998.1\|WP_036677557.1\|5306958_5307168_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505303.1\|5300982_5301636_-\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_LR698998.1\|WP_076137394.1\|5307796_5308948_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_LR698998.1\|WP_172628853.1\|5288762_5289050_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076137385.1\|5291710_5292727_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_LR698998.1\|WP_076137384.1\|5290224_5291175_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_LR698998.1\|WP_111505305.1\|5309076_5309532_-\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|377367
NZ_LR698998.1\|WP_036677525.1\|5285418_5286438_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_LR698998.1\|WP_076137388.1\|5300350_5300869_-\|dCMP-deaminase-family-protein	unknown	unknown	gnl\|CDD\|238613
NZ_LR698998.1\|WP_036677530.1\|5287973_5288522_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182012
NZ_LR698998.1\|WP_076105892.1\|5293914_5294454_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_LR698998.1\|WP_076129683.1\|5302736_5305187_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_LR698998.1\|WP_076206438.1\|5301823_5302675_+\|late-competence-protein-ComER	unknown	unknown	gnl\|CDD\|181080
NZ_LR698998.1\|WP_076137382.1\|5286714_5287977_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_111505301.1\|5297555_5300231_-\|ComEC/Rec2-family-competence-protein	gnl\|CDD\|273036	TIGR00361, Recombination_protein_2, DNA internalization-related competence protein ComEC/Rec2. Apparant orthologs are found in 5 species so far (Haemophilus influenzae, Escherichia coli, Bacillus subtilis, Neisseria gonorrhoeae, Streptococcus pneumoniae), of which all but E. coli are model systems for the study of competence for natural transformation. This protein is a predicted multiple membrane-spanning protein likely to be involved in DNA internalization. In a large number of bacterial species not known to exhibit competence, this protein is replaced by a half-length N-terminal homolog of unknown function, modelled by the related model ComEC_N-term. The role for this protein in species that are not naturally transformable is unknown. [Cellular processes, DNA transformation].	8.79785e-69
NZ_LR698998.1\|WP_036677560.1\|5307182_5307704_-\|PRC-barrel-domain-containing-protein	gnl\|CDD\|226398	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only].	4.26307e-21
NZ_LR698998.1\|WP_081389105.1\|5294588_5296562_-\|glycosyl-hydrolase-115-family-protein	gnl\|CDD\|379757	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.	8.49292e-66
NZ_LR698998.1\|WP_111505303.1\|5300982_5301636_-\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	8.4352e-20
NZ_LR698998.1\|WP_038572952.1\|5289236_5289878_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	gnl\|CDD\|180618	PRK06552, PRK06552, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional.	1.68797e-108
NZ_LR698998.1\|WP_036677553.1\|5305711_5306779_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.23498e-57
NZ_LR698998.1\|WP_076137394.1\|5307796_5308948_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NZ_LR698998.1\|WP_076137385.1\|5291710_5292727_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.10636e-102
NZ_LR698998.1\|WP_076137384.1\|5290224_5291175_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.22768e-104
NZ_LR698998.1\|WP_111505305.1\|5309076_5309532_-\|DUF523-domain-containing-protein	gnl\|CDD\|377367	pfam04463, DUF523, Protein of unknown function (DUF523). Family of uncharacterized bacterial proteins.	2.87245e-64
NZ_LR698998.1\|WP_036677525.1\|5285418_5286438_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	4.14823e-80
NZ_LR698998.1\|WP_076137388.1\|5300350_5300869_-\|dCMP-deaminase-family-protein	gnl\|CDD\|238613	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the enzyme is allosterically regulated by the ratio of dCTP to dTTP not only in eukaryotic cells but also in T-even phage-infected Escherichia coli, with dCTP acting as an activator and dTTP as an inhibitor.	4.31939e-43
NZ_LR698998.1\|WP_036677530.1\|5287973_5288522_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	5.92602e-47
NZ_LR698998.1\|WP_076105892.1\|5293914_5294454_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	7.62188e-36
NZ_LR698998.1\|WP_076129683.1\|5302736_5305187_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_LR698998.1\|WP_076206438.1\|5301823_5302675_+\|late-competence-protein-ComER	gnl\|CDD\|181080	PRK07680, PRK07680, late competence protein ComER; Validated.	9.65158e-129
NZ_LR698998.1\|WP_076137382.1\|5286714_5287977_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	5.35779e-08

>NZ_LR698998.1|WP_081389105.1|5294588_5296562_-|glycosyl-hydrolase-115-family-protein
MIARDHEQVFGKAPVQGAAATVIIRYATEDDGCPEWAEGFCLRFTGGEEDRILHIIGRDELGIIYGMLHYSRHVLGVDPFWFWAELPPAKKDVINLPISDYNSIQPKVRYRGWFVNDEVCLIGWKEDYPPTAEVWEPVFEALLRCGGNMVIPGTDLPRDGIHHQLAVDMGLWITHHHAEPLGAQMFLRAFPGKQASYKEYPELFEQLWREAIERQKDEKTLWVLSFRGQGDKPFWENDPSFDTPEKRGDLISFVVRKQYDMICEYVDQPVCCMAMYGEIAELYKQGKIEVPEGVIKIWADNGYGKMVSRRHGHLNLRVPALPEAGDQGKNGVYYHVTFHDLQASNHLTQFPTDPSFIVEELQGAFATGASEYLLVNSGNILPHLYTLDLTAKLWMDGIADADEQLQTFVNRFYTAQQGRIVQLYKSYFKNTIVYGPNADDRAGDEFYHHPARQIIGHWLQNKMESDERLRWAAGDVPFVEQVRWFRDRAERVVLVWYLLRKQCQEVMELLPEKERNRLHVQLLVQIELHWSGCRGLSSLCQAYMCYQEERFPEAFIEASHAVWDYKEGQQALLRAEIGQWKHFYRADWLTNIANTIDHVETARKFLRIQGDSPDMFLWYKEYLMPETEKHIYLENTHRNPLPDDELARRLEEKFNSL
>NZ_LR698998.1|WP_076105892.1|5293914_5294454_-|RNA-polymerase-sigma-factor
MLSEDIPYTAAYAPAMSLREMMEAYGSDVWNYAFFLTRSREQANDISQEVFLKAYKNVGKYRGQSSMKTWLLTITRNTAFSWSKNSFWRRFIALGDQPTTVNAPSAEKEALGNQYANRIWEIIMTLPEKNREVLVLDIQHGLSIAEMSDLLNVAQGTVKSRLARAREKVKEAIQKEERE
>NZ_LR698998.1|WP_076137387.1|5292799_5293918_-|hypothetical-protein
MKRNEDDSNPVMIGQTDWYAQAGKRPFIEDGFTPELMMRIEQAAANKSSGYKRYWMNKNVVLTSLVTILLIGSLTFPMGIWKNTGPVHSSSVQSQGAGILPSSSPATNDKALEPPTSPVEFEINGKKYYMPLPMNRDKSKAYAVETTAGILWSPPPPMVDYKKPKYTHPTEPFTLYLSSKDQTELSASSATRIYTLPLYAGGASTYQYLSGFFGAGDYALLFTYTKTIGSGIMENGRFFILNVKKAATGESVVPKELTSFDWELLEYKSIIAVDKEHDQIVFSYLEYPVDKTYRDKTVLYDMETLSIQTPASTIGFRDIDGQSLTMEYEMNGELCKADILTKGGPGWIDEDWAFLSEERQNELYQEFYSQTP
>NZ_LR698998.1|WP_076137385.1|5291710_5292727_-|LacI-family-DNA-binding-transcriptional-regulator
MKKLTIDDVAQKAGVSKSTVSQFLNKRFKYMSEATKNRIEAVIEELNYQPNGLARSLKQNRTHMVGIIVANIDYTLSIQCIRAIENELQHHGIQVIICNADENAEKESKYVETLIARQVDGLIIFPTGNNPSAYSKLIEADFPLVFMDRLVDGITTQSLLLDNEMAAKIGVGQLIQQGHERIALVSLPIGEHAITPRKERISGYKKAMEEAGITLRGEYICSVSKEELATGLEHLLALPEPPTALLATNDITLAEILKYANRNAISIPEQLSVIGIDDAEFAQIYNPVITTISQPAYEMGMQAAKIILSCIEDKGASVPITYRFPPTLQQGQSVKSYK
>NZ_LR698998.1|WP_076137384.1|5290224_5291175_+|sugar-kinase
MSKQLDAVTFGEPMAMFYANEAGPLHEVFSFSKALAGAESNVATGLSRLNHPTGYVTKLGEDNFGAFIAQAMKNENINTDNITFTKEHSTGMLIKSKVVTGDPKVEYFRKNSAASTLSLEDFDEAYFNFAGHLHVTSISAALSKSCHEFSIHAMEFMKSKGKTISLDPNLRPSLWPDTETMVSTINDLATRCDWFLPGLGEGKILTGLSTPEEIADYYLERGVSLVVIKLGPEGAYYKSSAGEGYVDGFKVERVVDTVGAGDGFAVGVISAMLEKLPIAEAVKRGNAIGALAVMSPGDMDGLPTREELAKFMQQEV
>NZ_LR698998.1|WP_038572952.1|5289236_5289878_-|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase
MKKMKVLQNVASVGVVAVIRADSAEEAFKMSVACIEGGLNNIEVTFTTPDADVAIKRLVAEYGSRAVIGAGTVLDPLTARIAILAGSEFVVSPSFEVETAKMCNLYGIPYMPGCMTLNEMKEALKYGVDVLKLFPGSAFGPDYVKAVKGPMPHVNIMPTGGVDLNNMEKWIANGCMAVGIGGNLTAPAKNGRYDQITDLAAQYVAKFKEIKGI
>NZ_LR698998.1|WP_172628853.1|5288762_5289050_-|hypothetical-protein
MIHGLNVRIYYPAGSEYMPAYNDKKLYQAADEDDAEYVEIESAFHGCKVTEGQIYRLERNYNNPQLFENGEAYVVDDETRENYAVFMLCKIALYK
>NZ_LR698998.1|WP_036677530.1|5287973_5288522_-|sigma-70-family-RNA-polymerase-sigma-factor
MVEQGLIRAAQAGDRDALITLLREIEGHVYKTAFYILHNEQDALDASQEALIRVYTKIGSYEEKAQFKTWVQRIVTNICIDKFRRTKPTVSIDEHEMVFQDKHNVEREVLSSYLAEDIREAIDQLPEHHRTVIVLRYLQDFSYNEIADCLDLPLNTVKSYLFRARQQLQNRLQEYQKGGVSG
>NZ_LR698998.1|WP_076137382.1|5286714_5287977_-|zf-HC2-domain-containing-protein
MKCAEVMEWMHRYLDKDLSQDEIIEMFRHIDNCPSCAEVFERLTLLSNELEQLPDVKPPFSLVDSILPQLAELDRSSREQSAVRSEEPVVVPFSRESSRGKPSKGTSIATRTGIGAIAAAVLLGIAIFNMPDKMPGAEVEQRMQDSAKTASDDTKDTAMESQASITANSDGASPAAGGENEGAAQFKTDAPEMNEDNAALDRATGPVDPASMPSAPADAADAGAGAGGRSITEPPQSADPKPTEKIAPPRQDVATKSHNSDSSNASSNQLKVDNKEQTADMNSDSAADSAPLMEDSLKIPYDYGREVMSLSSSEDPNVQTWTSPDGQYAIEFVGLQLVIYKKSPEGSAEERLAVNSYPLEGNWISGEWSADSSKFTYVTEKDGVNVTKVYTVQEAATASSSPAASPGATPTNTPTSSSTN
>NZ_LR698998.1|WP_036677525.1|5285418_5286438_-|DNA-polymerase-III-subunit-delta
MDAKTAIKEIKQGKISPLYVLYGSEKFRMNEFTALLEEQLIAKEDRDFAVIPFDLSETPVQAVVEEAETVPFMVERKLLLVRDASLFTAGKENAKLEHRIDLLSDYLQHPVDFSVIVFMVNNDKLDERKKIVKTVKSVGTVLAFNPLGAEELLRWVEKGIRERGCVMAPGTAEILITNAGTGLQGLSAEMDKLCLFAGKGGTVDAGAVESLVHRGTEQNVFTLVEDIANLRLDKALDTLYELLKQREEPIKIAALVARQFRIILQVKDLSAHSYSQGQIASQIGLHPYAVKLAGEQAHKFSSERLRQILSALADLDYKMKTGAIDKVLGLELFMLRLGV
>NZ_LR698998.1|WP_111505301.1|5297555_5300231_-|ComEC/Rec2-family-competence-protein
MKERPLLSFTVCWIAGSAAACLGSGFRLWLAWAGLLILLVSMRVWVNIGWKQLAVFYLAIILSAGYWEWSEGRNVSHLPEVLGRLMSELNETAVEAKGTIVSVVERDGDRVDFTMKLSELSLITEEDAASPDPRDEQDKRVHGELIMVQIKLLAEQEIAIAAEWRRGDQVSLNGVLEEPATARNYGGFDYRAYLHTQKIHWLLKGQGAENVQATAPDSWNPLMILRWNDEARAVLGAETDRLFQARHSGYMKGLVIGMQDDLDPDTFKQFSQLGLTHILAISGMHVAVYVGVLLFIFRRLRMTKETTLTVTLVLVPVYVLLTGAGPSIVRAGLMSMIALLAARVGMLKDGLNILAAAALVMLIWNPYMLLSVSFQLSFLVTLGLMVYVPLMDPLLSALPRWLKSAVSVTLVAQLVSFPLTIYYFNQFSLLSLVANLVFVPFITFIVLPLGTLALLLGRLWGDAAIFLAHITELLNNVTFYAVEWINGFAGGVLIWRSPSLLWIGVYYVLLYGLLYAAKLRVEARATPQYMEDETRPLAEISLPVNKHGGFGGAGSAQYFLDESKIVRWSGAIVLLSAVGLGLMLYKGYQSESQAGKGTISYLDIGQGDSILITTPKGAHILVDGGGTLNFGQKEEWRIRRSPFEVGAKVLVPLLKKRGIHRLDAIILTHGDQDHAGGLQAVMEAIPVSTLLFNGTLADRESYMEMMRTALENNVQLYAVHQGMRLSPDDKTELSFLWPEEQDREGAASGSSMLNSIPLLEDQNHDSVVFRLEMNGRNFLFTGDMDLEAEQEIVQQALQKGINAGPSIDVLKVAHHGSKTSTGESWLQFWHPAAAVISAGVNNLYGHPKAEVLERLEANQAAIFRTDQQGEIQMRVRADGIIVRHKLAEGAD
>NZ_LR698998.1|WP_076137388.1|5300350_5300869_-|dCMP-deaminase-family-protein
MTTAYRKDWDTYFMDIACMVSTRSRCSRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAGCMLSEQYEMEIVDGVETMVKKQRCIRTIHAEQNLLLFTDRIDREGSTVYVTDEPCWTCANMLANSGIVEIVYYRPYRKDMEKVEAMMAAKGIVFRQLENYEPPSETMIKVAE
>NZ_LR698998.1|WP_111505303.1|5300982_5301636_-|ComEA-family-DNA-binding-protein
MNKGSIVLGVAAAVIGSGLLWAAGSKGDSGIAGWETLNVGMEQAVGIAESGDAPAAGGSEGGHQTKGNKLHLEKDAGQGEAAGNAKDGEKVKVAAQAEQADQTSAAEKASTAAAGERAEGADQMPMAEGQTPAGDKVVAAKEVTELSASAASQEGKINVNTAGVKELMDLPGIGEKKAQAIMDYRNREGTFRSLSDLGKVKGIGPKMLEKLKALVIF
>NZ_LR698998.1|WP_076206438.1|5301823_5302675_+|late-competence-protein-ComER
MKVGFIGTGSMGSLLIDAFLSSGALNPCDVLASNRSLNKLLELEDRHPGINLCGSNSETATGSDIVFLCVKPLEFKTLTDEIGPYLRSDQIVVSITSPVQLQHLESALPSKIAKIIPSITHCVKSGTSLCIFGSRLNKEDRLVLLQLLSFIGVPLEIQEAHTRIASDFSSCGPAFLSYFIERWIEAAVEVTGIEETLISRLAGEMLLGTGKLLTEGEFTPQELQERVAVRGGITAEALNHLRISLEGVFERLIMTTHDKYDEDVTKLDALFGHDGITQSPVDR
>NZ_LR698998.1|WP_076129683.1|5302736_5305187_-|leucine--tRNA-ligase
MSDNQTNSIPATGYRAQAIEPKWQKFWDENKSFKTGEDPEKPNFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGFNVLHPMGWDAFGLPAEQYAMDTGQHPRDFTDKNIDNFRRQIKSLGFSYDWDREISTTDPDYYKWTQWIFIQLYNKGLAYVAEVPVNWCEALGTVLANEEVIDGKSERGGHPVVRKPMRQWILRITEYAERLLEDLEELDWSESIKDMQRNWIGKSTGAEVNFNIEGHEANLTVFTTRPDTLFGASYCVLAPEHELVDVITTEAQRAAVAEYREKASRKSDLERTDLAKEKSGVFTGAYAINPVNGAKAPIWIADYVLAGYGTGAIMAVPGHDTRDWEFAKQFGLNIVEVVQGGNVEEEAYSGDGPHVNSDFLNGLKNEEAIAKMIAWLEEKGVGKGKVTYRLRDWLFSRQRYWGEPIPILHLEDGTMKTVPVDQLPLVLPDVEAIKPSGTGESPLANVTEWVETIDPETGMKARRETNTMPQWAGSCWYYLRYIDPKNDQELCSPEKQKAWLPVDLYIGGAEHAVLHLLYARFWHKVLYDLGVVETKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAFGADTLRVYEMFMGPLEATKPWNEKGVEGVHRFLSRVWRLFVSEDGKLSTKITADGGTDEFKRTWHKTIKKVTDDFEHLRFNTSISQLMIFINDAYKQETLSQEAAEHFVQMLSPLAPHIAEELWQLLGHEGSISYVAWPTYDEAWTVDAEVEIVIQVNGKIVQRALIPQDMGQEEMQAHALSLPNVSAAVEGKTVRKIIAVPGKLVNIVVG
>NZ_LR698998.1|WP_036677553.1|5305711_5306779_-|AI-2E-family-transporter
MEQWSQSKWFRWMIGVLLSLIILYFVWLLRPMLQGIFVFLKAILAPFLAAMIISYVLNPVVSMLAGRKMPRSVAVLLIYAVFLTAITVIAINLIPMFIEQLEELNEHLPEITLQAQGLMSHMNTRLIPPGVEMGMNNWFFQLENRLAEGISHFLDNIGTTINLLFNAFIVPFLVFYILKDFDVFERTVVSCLPRARRKSIVTLLKDIDAALGNYIRGQFLVCIIIGVLAYIGYAIVGMPYALLFASVVAVFNIVPYMGPFLGAAPAIVMASTVSFRLVLLVAVVNTLCQIVESNIISPQVVGRTLHLHPLLIIFALLVGGELAGMIGLILAVPFFAAAKVVIQHFMAFLIKRKPV
>NZ_LR698998.1|WP_036677557.1|5306958_5307168_-|hypothetical-protein
MKCPNCNSKDIGKIGSHQFYCWGCFIELTVNGEKMSVYQVEEDGTLSSLDDLFSGDDMTQDFPQIHASS
>NZ_LR698998.1|WP_036677560.1|5307182_5307704_-|PRC-barrel-domain-containing-protein
MKLQDLIGLAVYEVEEGNAIGKIVDILLDSNWNITGIELESKSFFGGHVKFVAWEDIVAYGEDAVMIRSKESIDKIDADHIPCTFLLGKNKLKDLKVLTTTGTILGRISDVYFDQKLGNTIGALEISDGLVTDLIEGRKWLPCSDEMSIGENALMVPAMSEERLQKAINIVNG
>NZ_LR698998.1|WP_076137394.1|5307796_5308948_-|cysteine-desulfurase
MKTIYLDHAASTPVHPEVAKVMLNIMTEQYGNASSVHQFGRSAKKILNGARDTIAAFLGCSPEEWVFTGGGTESDNLALYGAVAAVAQKGNHIITSAIEHHAVLHTCEELEKEGFKVTYLPVDSTGRVSVADVEAAVQEDTVLISIMYANNEVGTVQPIQEIGQLARERGILFHVDAVQALGALPITLRELPVDYMSFTAHKINGPGGIGGLYVRSGAPLHPRLHGGLQERGRRAGTENLAGTAGFAKAVEIAVTGLSERRQKVQLLRNRLLEELDALIGRESYSINGNTEHFLPSILNLSFPGARTDVMLMNLDMDGIAAASGSACTSGSLEISHVLRAMELPENILGSAIRFSMGLGNTTEEIEYVARKVETILNRLRIRD
>NZ_LR698998.1|WP_111505305.1|5309076_5309532_-|DUF523-domain-containing-protein
MILVSSCLAGMKVRYNGTDCLDEKIQKLLNENQAIAVCPELLGGFSTPREPAEIVGGDGEDVLAGTAKVVDRSGIDVTELYLKGAYITLQKAQEVSATMVVLKENSPSCGSTMIYNGEFKGKKIAGNGVTAALLRKNGIEVTSEENWLSLS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_14

5348593-5348691

Orphan

Consensus_repeat	Method
TGATTTCAGATCGGCAAAACTTGCTTCGTAAGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_14

>merge|NZ_LR698998|14|5348593-5348691|CRISPRCasFinder
TGATTTCAGATCGGCAAAACTTGCTTCGTAAGCATACGCTTTGTTTTGTAAGCATAAGCTGCTTTGATTTCAGATCGACAAAACTTGCTTCGTAAGCAT

>NZ_LR698998|14|14|5348593-5348691|CRISPRCasFinder
TGATTTCAGATCGGCAAAACTTGCTTCGTAAGCAT	ACGCTTTGTTTTGTAAGCATAAGCTGCTT
TGATTTCAGATCGACAAAACTTGCTTCGTAAGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_038572987.1\|5346468_5347782_+\|uracil-permease	unknown	unknown	gnl\|CDD\|236744
NZ_LR698998.1\|WP_052097271.1\|5352294_5353197_-\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237275
NZ_LR698998.1\|WP_162636812.1\|5343220_5343376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076105448.1\|5342560_5343070_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_LR698998.1\|WP_036677653.1\|5353186_5354437_-\|protein-translocase-subunit-SecD	unknown	unknown	gnl\|CDD\|237276
NZ_LR698998.1\|WP_036677641.1\|5343509_5343953_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_LR698998.1\|WP_076137430.1\|5355106_5356705_+\|stage-V-sporulation-protein-B	unknown	unknown	gnl\|CDD\|240529
NZ_LR698998.1\|WP_076137426.1\|5348761_5351164_-\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_LR698998.1\|WP_038572999.1\|5359122_5359443_-\|preprotein-translocase-subunit-YajC	unknown	unknown	gnl\|CDD\|235518
NZ_LR698998.1\|WP_076137423.1\|5338271_5340056_-\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_LR698998.1\|WP_076130399.1\|5356709_5357474_-\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_LR698998.1\|WP_172628854.1\|5341557_5341695_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036677662.1\|5358202_5359027_+\|inositol-phosphorylceramide-synthase	unknown	unknown	gnl\|CDD\|239481
NZ_LR698998.1\|WP_036677635.1\|5340111_5341365_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|273080
NZ_LR698998.1\|WP_111505315.1\|5351193_5352144_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_LR698998.1\|WP_080742571.1\|5354658_5354937_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379375
NZ_LR698998.1\|WP_038572995.1\|5357700_5358093_+\|TIGR04086-family-membrane-protein	unknown	unknown	gnl\|CDD\|274969
NZ_LR698998.1\|WP_036677647.1\|5348033_5348552_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_LR698998.1\|WP_036677637.1\|5342062_5342512_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_036677643.1\|5343974_5346155_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_038572987.1\|5346468_5347782_+\|uracil-permease	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	0
NZ_LR698998.1\|WP_076105448.1\|5342560_5343070_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	6.98234e-81
NZ_LR698998.1\|WP_036677641.1\|5343509_5343953_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	8.96721e-98
NZ_LR698998.1\|WP_076137430.1\|5355106_5356705_+\|stage-V-sporulation-protein-B	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.99162e-124
NZ_LR698998.1\|WP_076137426.1\|5348761_5351164_-\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LR698998.1\|WP_038572999.1\|5359122_5359443_-\|preprotein-translocase-subunit-YajC	gnl\|CDD\|235518	PRK05585, yajC, preprotein translocase subunit YajC; Validated.	8.44107e-34
NZ_LR698998.1\|WP_076137423.1\|5338271_5340056_-\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_LR698998.1\|WP_076130399.1\|5356709_5357474_-\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	7.59236e-64
NZ_LR698998.1\|WP_052097271.1\|5352294_5353197_-\|protein-translocase-subunit-SecF	gnl\|CDD\|237275	PRK13022, secF, protein translocase subunit SecF.	2.93545e-104
NZ_LR698998.1\|WP_036677662.1\|5358202_5359027_+\|inositol-phosphorylceramide-synthase	gnl\|CDD\|239481	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.	2.33906e-17
NZ_LR698998.1\|WP_036677635.1\|5340111_5341365_-\|histidine--tRNA-ligase	gnl\|CDD\|273080	TIGR00442, hisS, histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. [Protein synthesis, tRNA aminoacylation].	0
NZ_LR698998.1\|WP_111505315.1\|5351193_5352144_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.63448e-42
NZ_LR698998.1\|WP_080742571.1\|5354658_5354937_-\|hypothetical-protein	gnl\|CDD\|379375	pfam13797, Post_transc_reg, Post-transcriptional regulator. This family includes post-transcriptional regulators.	6.33495e-18
NZ_LR698998.1\|WP_038572995.1\|5357700_5358093_+\|TIGR04086-family-membrane-protein	gnl\|CDD\|274969	TIGR04086, hypothetical_protein, putative membrane protein, TIGR04086 family. Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. The function is unknown.	3.79247e-20
NZ_LR698998.1\|WP_036677653.1\|5353186_5354437_-\|protein-translocase-subunit-SecD	gnl\|CDD\|237276	PRK13024, PRK13024, bifunctional preprotein translocase subunit SecD/SecF; Reviewed.	1.8125e-133
NZ_LR698998.1\|WP_036677647.1\|5348033_5348552_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	8.39455e-94
NZ_LR698998.1\|WP_036677643.1\|5343974_5346155_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0

>NZ_LR698998.1|WP_036677647.1|5348033_5348552_-|adenine-phosphoribosyltransferase
MDFKDSIRVIPDFPKEGISFKDITTLLKDGEAYRQAIDALKALVAHLEIDVIAGPEARGFVVGAPLAYAMGVGFVPIRKSGKLPYETIEVGYDLEYGKDTLAVHTDAIKPGQKVLIADDLLATGGTIATSVNLVEQLGGKVVGAAFLIELVELAGRNKLSGVEVLSLVNYED
>NZ_LR698998.1|WP_038572987.1|5346468_5347782_+|uracil-permease
MQREIQVNEKLPWGPGFLLSLQHLFAMFGSTVLVPNLFGVDPGMILLMNGIGTLLYIWICRGKIPAYLGSSFAFIAPVLSVLSRYPNDHMKGYSLALGAFIVTGIIFVLVALIIRYAGTKWIDVVFPPAVMGAIVATIGLELVPVAARMAGLIAPEGVAVADWTPDGKTIALSMVTLGVTVIGAVLFRGFPKIIHILIGIVTGYGLAYILKMVDTAAISNAKFLAHPSIVTPSFDWNVIFTIIPVSLVVIVEHIGHLLVTSNIVGRDLAKDPGLDRSLMGNGISTIISGFIGSTPNTTYGENIGVMALTKVYSVYVIGGAAVIAILLSFSGTFSSVIANIPTPVMGGVSLLLFGVIAASGLRIFVEQKVDFSKATNMIMATLVLVVGISGTTLTMGNVKLSGMALATIVGIVLALFFKLIEVLGLSNDGGESDKTAH
>NZ_LR698998.1|WP_036677643.1|5343974_5346155_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MGIERLIDKAGAYIKDKDLLRIREAYEFADQAHHGQIRKSGEPYILHPLAVADIVVNMQMDVISIVAALLHDVVEDTTVSLEQIRAKFGDTCAMLVDGLTKLERIRFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIFCPVADRLGISAIKWEMEDIALRYLNPQQYYRIANLVHKKRAEREQFIDSVIGRIRAKLDEMGIEGDLSGRPKHIYSVYNKMSTKNKQFNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTVVGPGGEPTEVQIRTWEMHRTAEYGIAAHWAYKEGSSNNANPENRMPFFREILELQHEAKDAEEFVKSLKMDFFSDLVFVFTPKGEVIELPAGSVPLDFAFRIHTEVGNRTIGSKVNGRIVPLDHKLKTGDIVEILTSKHSYGPSRDWLKIAQSSHARSKIKQWFKKEKREENVEKGREAIERELKRLNVEVSEWISDEKLLEAAKKFAFNDVEDMLSAVGFGGITASQIASRLTEKLRKEQEEAANHLELTSEMKEIKSSGERRNQPTNGVSVKGIENLLVRFARCCNPVPGDDIVGYVTRGRGVSVHRQDCPNIPGEGDGEEAARVIEVEWEGTMEANYSVDIEITGHDRNGLLNEVLQAVSESKTNISAVTGRSDKNKMAMIHMTILIRNTEHLQSVVDKVKRVKDVYTVNRIMQ
>NZ_LR698998.1|WP_036677641.1|5343509_5343953_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRVVVQRCKDAKVTVDETVTGAIGNGLMLLVGVTHEDTEKDAKYLADKIAGLRIFEDDAGKMNYSVTDTNGAILSVSQFTLYGDCRKGRRPNFMGAAAPAEAERLYDYFNQELRAGGLQVETGIFGAMMDVSLTNWGPVTLILDSRS
>NZ_LR698998.1|WP_162636812.1|5343220_5343376_-|hypothetical-protein
MRQSQKAWVWRSIPALPTGSPMEACALAKKLDGETEPLVIKGRSRNLLPRT
>NZ_LR698998.1|WP_076105448.1|5342560_5343070_-|type-1-glutamine-amidotransferase
MSNVAFLLANDFEDSEMKVPYDEIIKAGHQADIIGLKKGETLLGKKKEVSYAADKAIADVQASDYDAIVIPGGSSPENLRQNADILKFVKEANEAGKPIASICHGPQILISADLLKGRTITSYPPLKDDVVNAGAEFKDEEVVVDRNYITSRTPKDEPAFVREILKVLK
>NZ_LR698998.1|WP_036677637.1|5342062_5342512_-|hypothetical-protein
MSRKIQAYFRTENEAEGAKTALISYKVDGLEVWPLTDPIGNDRNILFPIIPLDSASVVAGTTGTLGTASTPAAGAMLVPGIAASDTRADPETHYSVNEDQVSANVAEGDLEDGDLSELRYVMELSIAEENYNEVVEILRGKGAYVEQFE
>NZ_LR698998.1|WP_172628854.1|5341557_5341695_-|hypothetical-protein
MDDDPASLGCKDSVDERMNDLPENVRRKWAVLIAAISSRLRVGGR
>NZ_LR698998.1|WP_036677635.1|5340111_5341365_-|histidine--tRNA-ligase
MAKERFEKPTGTQDVLPGAVEKWQYIEGKARDLCRRFNYREIRTPMFEHTGLFERGVGETTDIVEGEMYTFKDKGDRDLALRPEGTAGVVRAYVQNKLYGEPDVSKLYYIGPMFRYERPQAGRYRQFHQFGIEAFGAVDPAIDAEVISMGYQFYKDLGLKDVRVELNSVGNAPSRAAYREKLLGFLRPMKDNLCSDCQRRIERNPLRVLDCKVDQDKFTDAPSILDSLDDECITHFEKVKMHLDIMGVEFTINPRLVRGLDYYTHTAFEYKAAGIGSIDTVGGGGRYNGLVEEIGGPDQPGIGFGIGLERILLILEDQKVELETAKPLDVYFVALGEEADIEISKQLYFLRSQGFSAERDYLGRKMKAQMKSADRMSARYTAILGEDELKNGVIALKSMSTGEQQTVKLEELAQALV
>NZ_LR698998.1|WP_076137423.1|5338271_5340056_-|aspartate--tRNA-ligase
MQRSHNCGQLTPEHIGQTVTLNGWVQTRRDLGGVLFIDLRDRSGIVQVVFNPDYSGEALQIADKVRSEYVLAVKGNVVKRDEETINRNLPTGEIEVQITDIEVLNAAKTPPFFIEDGVEVDESLRLKYRYLDLRRPEMQKTLLLRSKASKIFRDFLDSEGFIDVETPILTKSSPEGARDYLVPSRVHEGEFFALPQSPQIYKQLLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIETSFLSQDELLGMMENLMQRLFKETVGADIQLPFQRLTYAEAMGKYGSDKPDLRFGLELVEMNDIVATSGVKVFASVIEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQVKDGEFKGPIVKFFTEEEIAAVKERTGAEEGDLLLFSADTKKVVADVLGALRVKIGRQLGLIDDNVFKFAWVTDFPLLGYDEDQKRYVAEHHPFTRPREEDLHLFDTDPGAIRAQAYDIVLNGYEVGGGSMRIYKREVQEKMFQALGFSDEVAYEKFGYLMDAFEYGTPPHGGIAFGLDRLIMLLAGRTNLRETIAFPKTASATDLLMDAPSPVDGSQLEQLHIKLALKPKKEKEKE
>NZ_LR698998.1|WP_076137426.1|5348761_5351164_-|single-stranded-DNA-specific-exonuclease-RecJ
MLYSKTRWQSPAANPDTVRDMARSLSISPLLSSLLVNRGMNTPHEALSFMDGSEEEQHDPFLLKGMAEAVPRIRKALKEEEHILIYGDYDADGVSSTALMIHLLRYLGASFDIYIPHRSNEGYGLHNHALDWALQQGVSLIITVDTGISAYHQVAYANELGIDVIVTDHHEPPELLPEAYTLINPKLPDCPYPFKGLAGVGVAYKLAQAILGEETPTEWAEIAAIGTVADLMPLLGENREIVRNGLESMRHSSFPGIRALLAVSGVNMSTVSAVNIAFGMAPRINASGRLDHAGRAVSLLTTEHAAEAEQLAGELDLLNKERQLVVERIVVEATAKLEQMTQGGEIPDIIVLADHGWNVGVVGIVASKLLERYYRPVIILDIHPETGMCKGSARSIPGLDIYAALSSCSDLMDHFGGHPAAAGMSLHRDGLEAFAAALNEYASGVLTPEHFVPVASADAEVSISDLSLQTALELERLAPFGMSNPLPKFIIRGATVKETRTMGQDGKHLKIVLQQGKSSIEALAFGKGALSRLLPAGTTINVLAELSINEWNGSRKSQLMLQDLSVQDAQLFDLRGAADAVRQAAHIRELLLPYSGAGPYRAAAVFQNGRSTPASELIGMSLWVYDKEAGISAAVKDEPLQEAGHVSLLCLLDMPETPEQLDALLQTFPNADNIALLHSIKDGRERLITPTRDHFKILYKLLASITSVATPENEVLLRLSRQSSLSIRMLNNMLDVFEELDFIKRSQGSVAFITQPVAKSLTASSHFVRLGQMAEMEQYFMEGSLSELQDWMLSRRLGVS
>NZ_LR698998.1|WP_111505315.1|5351193_5352144_-|cation-transporter
MNKERSPQSETVAWTGIISDVTLAVAKGSFGYISGSKALMGDALYSGADAAAKLAVILPWRSEQGRKSKQRIEERRGTKEPLLAILFSVFILMGGLQIAFSAIRDLTDGKSSTHGQLAFVTVLVSIVFKEAVFQYQYRYFKKIGDGSHAAYVNSHRFSLYTSITVLVGISLSMGGTYWHPLSYMDPIAALLTGVLILRKGYSLIASSINTKNAQELPSEEAANFIETVQRVHGVIRVEHLKALEQGNYVNLQVKISVNPRITVMEAQDISECARKLLQHRFVHVGEVHMDVVPYDPGYPYKSNYELPDNDIPTLLQ
>NZ_LR698998.1|WP_052097271.1|5352294_5353197_-|protein-translocase-subunit-SecF
MRFKKELDFVHLSKYFYIFSIALTVAGLIFLATFGLNYSVDFKAGSNVDISLSKNLNLDQVKTATSAIDVDHEPTISFGDQRVNIRYDEVLDEAQDEALKAEILKLDDKASFEINTVDTEMAKELARNAIYAVLISCLGIIIYVSIRFEWRFAVASIVALLHDAFIVVALFSIFRLEVDLTFIVAVLTIIGYSINDTIVIFDRIRENLRFGKQKTYEDLKHLVNKSVAQTLMRSLYTAFTVFIAAFFLLLFGGESIKMFSLAMVIGLLFGAYSSIFIASPLWLVLKKREKVKVKSSPNKG
>NZ_LR698998.1|WP_036677653.1|5353186_5354437_-|protein-translocase-subunit-SecD
MKRLMGFFITVLVLTGVMAFTTPGLLDKVRLGLDLKGGFEILYHAEPMEAGAALSRASLLKTAESLEKRANALGTSEPEVTTEGTDRIRLKIAGVTDEAEVRKKMKEPAVLTFRSAAEGDAEGTYSKIELVGSDFVEGAAEVGRDNLNQPIISIKIKDKDKFAEITKRLLGKNLAIYLDENKLSDPTVQAVLTDGSASISGNYTIKEARELADTINLGALPLKLTEKYSQSVGATLGKQSLDQTIRAGLLASVIILIFMIGMYRLPGLLASFALLLHTWALIAVFVFADFTLTLPGIAAFILGIGMAVDANIITNERIREEMRSGKSILSSVKAGNKSSFRTVMDSNVTTIIVAAVMFAFGTGAVKGFALVLIVEIVLSIATNLYFSHWLLSQLVKAGKLNKPKSFGVKESEIRAL
>NZ_LR698998.1|WP_080742571.1|5354658_5354937_-|hypothetical-protein
MSDLWRCQHVESEQWNHDQHSEEIEAMCRSKAEEFRLLGYEYVTSKDIWDCISRNYDKEGLPPLHKLVNDIYSLKANSYMNYLTIAAYRGLN
>NZ_LR698998.1|WP_076137430.1|5355106_5356705_+|stage-V-sporulation-protein-B
MKKQSFIQGTLILLAAGIINRMLGFIPRIALPRIIGAEGVGLYQLAYPFFLVLVTVITGGIPLAIAKMVAEAEGENRPEKSRLILRTGLALSVGLAIFFTLVALVSASWVSNVILTDHRVYYTFIAMIPMIGIVAVSAIYRGYFQGKQNMIPSALSSIFESLVRIFFMLWFSWLLLPKGIAMAAAGAMLGVTVGEIGGMLAILWQYYVITKKDKKQTNPTPEHPALEPEVISSDTQGVKANSPILRRLLGISIPVTASRLVGSFSYLLESIITVRSLALAGIAAAAATAQYGSLQGMVIPLLLLPGALTSSLAVSLVPSISEAAARKDLPTIHKRMHQALRLALVTGAPFAVLMYILAVPLCNLLYGNADTAPMLKLMAPFALFIYVQAPLQAALQAMDRPGRALINTLIGAVVKIILIVILASQPEYGIYGAIIAIIVNSILVTLLHGYSVVSLISLSLRVTETIKTLCAMVVMGAGVHYVYTSIPIADVQWIQFIFASAIGMVLYFGISLLAGLISIRDLDRLPFIKRRL
>NZ_LR698998.1|WP_076130399.1|5356709_5357474_-|DUF421-domain-containing-protein
MFQHISTHIFLTVLMYFFIFLCMRIMGKREIGKLSVFDLTISIMIAEIAVFVLEDINRPIYEGVVPMATLVLIQVIVAQLSLKSRKLRLLMDGKPSILISGGKLHRGEMRRQRYNIDDLLQQLRGQNIASPADVEFAILEPSGQLTVFEKEKGSSSSNPSGNSSAAAEHKKSDDNKGNKNRKIELPKNKIRYEGLPIPLIMDGKVQDQNLEMIGKTRFWLRTQIRQKGVSDFKNVFLCSIDHKGRIYVDRLDNR
>NZ_LR698998.1|WP_038572995.1|5357700_5358093_+|TIGR04086-family-membrane-protein
MYLIRRMFSWRIANPVLSGLCRSFLWMLMGAFVLSLLLWGSSLKEQDLSMYTYIVHGIAAAFGGLTAGRRATSKGWYQGSLTGAFYGVIVLLIGFLALDSAPSGVDLLWVLAAAAIGALGGMFGVNLQKS
>NZ_LR698998.1|WP_036677662.1|5358202_5359027_+|inositol-phosphorylceramide-synthase
MNHIVLYTVALVVILVWIGAKRNPLMALVEIGKEMLRSYKFLLLIAGMFGVLAINKYELQIEQKMHLTSDYTPFIFGLEGHFVQAVQDIFYSPWLTPIIVFFYIFMLQSVLAASLGVYLLDKNRVMLYATCYAIIINYALAIPFYLYFPVNEVWSYLPAGVKFTMLDVFPKFEQEYRPLSGLNNCFPSLHTSISVTMALLAFRSGNRRWMVITSISAVVIVFGIFYLGIHWLTDMIGGTLLAVLASTVGVQLAKLTLRGREESLTVPSRVTNVR
>NZ_LR698998.1|WP_038572999.1|5359122_5359443_-|preprotein-translocase-subunit-YajC
MIQSFQYAAGAGGGGSILGLVGPFVLMFVVFYFLLIRPQQKKTKTRNAMLKALKKGDKIVTIGGLHGTIMEISDDIVVLRVNDVTKLTFDRGSISHAVATDVEEKV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_15

5749234-5749308

Orphan

Consensus_repeat	Method
TCGGATTTAATTGCACTTTGTGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_15

>merge|NZ_LR698998|15|5749234-5749308|CRISPRCasFinder
TCGGATTTAATTGCACTTTGTGCAATAGAAATCCTTATAAGATGGGTAACATTCGATTTAATTGCACTTTGTGCA

>NZ_LR698998|15|15|5749234-5749308|CRISPRCasFinder
TCGGATTTAATTGCACTTTGTGCA	ATAGAAATCCTTATAAGATGGGTAACA
TTCGATTTAATTGCACTTTGTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_081388916.1\|5745271_5746243_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_LR698998.1\|WP_081394314.1\|5743037_5743748_-\|YutD-family-protein	unknown	unknown	gnl\|CDD\|368821
NZ_LR698998.1\|WP_076134174.1\|5739741_5740926_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_LR698998.1\|WP_076134175.1\|5737454_5738717_+\|sporulation-integral-membrane-protein-YlbJ	unknown	unknown	gnl\|CDD\|274333
NZ_LR698998.1\|WP_111505503.1\|5756952_5758998_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
NZ_LR698998.1\|WP_111505507.1\|5760431_5762381_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
NZ_LR698998.1\|WP_111506405.1\|5755933_5756839_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505495.1\|5749507_5752510_-\|fibronectin-type-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|200459
NZ_LR698998.1\|WP_036685317.1\|5738791_5739595_+\|NAD-kinase	unknown	unknown	gnl\|CDD\|235317
NZ_LR698998.1\|WP_111505509.1\|5762406_5763144_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_LR698998.1\|WP_162636837.1\|5758994_5760416_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
NZ_LR698998.1\|WP_076128009.1\|5748104_5749133_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_LR698998.1\|WP_076134173.1\|5741007_5742447_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_LR698998.1\|WP_111505499.1\|5753576_5754158_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505497.1\|5752754_5753423_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_LR698998.1\|WP_076134163.1\|5754175_5754712_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076134176.1\|5736658_5737042_-\|globin	unknown	unknown	gnl\|CDD\|381281
NZ_LR698998.1\|WP_111505501.1\|5754966_5755434_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505493.1\|5746281_5747982_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200477
NZ_LR698998.1\|WP_076134172.1\|5743983_5744889_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_081388916.1\|5745271_5746243_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	8.49736e-23
NZ_LR698998.1\|WP_081394314.1\|5743037_5743748_-\|YutD-family-protein	gnl\|CDD\|368821	pfam06265, DUF1027, Protein of unknown function (DUF1027). This family consists of several hypothetical bacterial proteins of unknown function.	1.71059e-48
NZ_LR698998.1\|WP_076134174.1\|5739741_5740926_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	1.41363e-26
NZ_LR698998.1\|WP_076134175.1\|5737454_5738717_+\|sporulation-integral-membrane-protein-YlbJ	gnl\|CDD\|274333	TIGR02871, conserved_hypothetical_protein, sporulation integral membrane protein YlbJ. Members of this protein family are found exclusively in Firmicutes (low-GC Gram-positive bacterial) and are known from studies in Bacillus subtilis to be part of the sigma-E regulon. Mutation leads to a sporulation defect, confirming that members of this protein family, YlbJ, are sporulation proteins. This protein appears to be universal among endospore-forming bacteria, but is encoded by a pair ORFs distant from eash other in Symbiobacterium thermophilum IAM14863. [Cellular processes, Sporulation and germination].	6.45389e-92
NZ_LR698998.1\|WP_111505503.1\|5756952_5758998_+\|glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.44101e-41
NZ_LR698998.1\|WP_111505495.1\|5749507_5752510_-\|fibronectin-type-III-domain-containing-protein	gnl\|CDD\|200459	cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins. Enzymes such as amylases, cyclomaltodextrinase (CDase), and cyclodextrin glycosyltransferase (CGTase) degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs), consisting of six, seven, or eight glucose residues, respectively. CGTases are characterized depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The maltogenic alpha-amylase from Bacillus is a five-domain structure, unlike most alpha-amylases, but similar to that of cyclodextrin glycosyltransferase. In addition to the A, B, and C domains, they have a domain D and a starch-binding domain E. Maltogenic amylase is an endo-acting amylase that has activity on cyclodextrins, terminally modified linear maltodextrins, and amylose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	4.27632e-158
NZ_LR698998.1\|WP_036685317.1\|5738791_5739595_+\|NAD-kinase	gnl\|CDD\|235317	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	2.71283e-132
NZ_LR698998.1\|WP_162636837.1\|5758994_5760416_+\|glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.42976e-53
NZ_LR698998.1\|WP_076128009.1\|5748104_5749133_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.2554e-101
NZ_LR698998.1\|WP_076134173.1\|5741007_5742447_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	2.68393e-92
NZ_LR698998.1\|WP_111505507.1\|5760431_5762381_+\|glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	3.16508e-46
NZ_LR698998.1\|WP_111505497.1\|5752754_5753423_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	4.02786e-35
NZ_LR698998.1\|WP_111505509.1\|5762406_5763144_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.25905e-18
NZ_LR698998.1\|WP_076134176.1\|5736658_5737042_-\|globin	gnl\|CDD\|381281	cd14772, TrHb2_Bs-trHb-like_O, Truncated hemoglobins, group 2 (O); Bacillus subtilis TrHb like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). TrHb2's belonging to this group include monomeric Bacillus subtilis trHb (Bs-trHb), which exhibits an extremely high oxygen affinity, and a dimeric TrHb2 from the thermophilic aerobic spore forming bacterium Geobacillus stearothermophilus(Gs-trHb).	7.02136e-61
NZ_LR698998.1\|WP_111505493.1\|5746281_5747982_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.20538e-177
NZ_LR698998.1\|WP_076134172.1\|5743983_5744889_-\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0

>NZ_LR698998.1|WP_076128009.1|5748104_5749133_+|LacI-family-DNA-binding-transcriptional-regulator
MKVTISDIAKAANVAKSTVSKVLNDSPKISQETKHKVREIMKQMNYTPSSIATGLARQSSCNIGLLVDMSKESEFLNQFFYNIIGGIESVIAPLKYELTISNVQHSSPEGHFLNRLVFSKRVDGIIANNSVLTEELCEELNRLEFPYISIGEIMTPGSWVDFDNEAGGSMLTSHLIKQGYSKIAFIGGQQQEKIYTHRLSGYLQALQQADLADQQQWIINCKADEHESYHAALELLQSEDRPDSVVCMNSYVAFGVLQAAKSLDIHVPSQLGIAAFDEYPLSRYTTPPLTSLNIDTFQLGVSSGELLMQRIRNNNIPSRHLLLEPELIPRESTMRSQFPAGT
>NZ_LR698998.1|WP_111505493.1|5746281_5747982_-|glycoside-hydrolase-family-13-protein
MPHTWFLYHTSEDPFAYPVGTGILKLRLFTQAGQQLSCTVIYSDRYDSPGHEVPLQMERIGSAGVYEIHEAVIETPTKKCRYLFHVANPVGEYVWYGERGASENRERAGSFQYAYLHHSEALKLPSWSMDAVTYQIYPSSYNEGTLQGISDKMPYLQQLGVNVVYMTPVFESPSEHKYNTSDYYKVDPVFGDTDGLKALVSQAHRHGIKVILDAVFNHSGDRFFAFKDVLAKGEESPYKDWFFIHSFPVTQTPVPNYETFAKAEAHMPKLNMDNPDTADYMIEVAKYWVRETAIDGWRLDVANEVNPRFWSRFRQELKSEYPEILLIGEIMHASGPWLRGDQFDGGMNYVLRDAVLEFFAEQSTGPVRFMEQLLHQEALYNDQANSAMFQLLGSHDTLRFLTACKEAGRGWDRVSTAAERMMLAVFFQMTYIGIPMIYYGDEVGMEGATDPHCRKAMVWQEQAQNAVMHKWYQQLISLRKSHEVLRKGTFRPWFTDEVRNVLGYIRGVEHEKIGLIINNSPNPYQLELSPFRADKNELTDLLSGAILKNNNKLTVSIEPFGCLMLY
>NZ_LR698998.1|WP_081388916.1|5745271_5746243_+|M23-family-metallopeptidase
MSSGDPASASKEAQWSGRRQIYEQMSAATGIPWFRFAAIDQYERTLAKKGASGQPVSTRLTAIKIPAPVWAGPLNPDQGDTSPNSISFFDGFGSDGSGDGIADPENDADVLYSMARHLLKYGQSASDFSIGVWEYYHNGRASQRITQFAKLYEHFGRLDLSGNAFPLPLSNLYSYRSTWGTGRSWGGARIHEGTDLFAPQGVPVRSTCFGLVETKGWNRYGGWRIGIRDIENRYHYYAHLSGYNKTISRGDIVTPGEIIGWVGSSGYGNPGTQGKFPPHLHFGIYRDRGITEWAFDPYPLLKQWENQEYRDLKNKRSKKSAVN
>NZ_LR698998.1|WP_076134172.1|5743983_5744889_-|lipoyl-synthase
MSNKTAKQPKPDWIKIKLTTGDNYQEIKSMMRSKTLHTVCEEARCPNIYECWANRTATFMILGDICTRACRFCAVNTGMPTELDLQEPERVAEAAEKMNLRHCVVTSVARDDLADGGAQIFAETVAAIRKRLPLCSVEVLIPDFLGDRNSLEIVMNSNPDILNHNIETVERMSDRVRAKAKYARSLELLRRAKEMKPNIPTKSSIMLGVGEEWNEILQAMDDLRAVNCDILTLGQYLQPTPKHLNVEKYYPPEEFALLKEEGMKRGFSHVESGPLVRSSYHAHEQVKSAAQAREERAVSSS
>NZ_LR698998.1|WP_081394314.1|5743037_5743748_-|YutD-family-protein
MIVIGGKGYELMLDHKDGWNPEAFRGRYSEVLERYDYIIGDWGYSQLRLKGFYRDNHPKVNRDTAISGMVDYINEYCNFGCAYFVLHKLKEVPQEGMFKDILIKEIPEPSDEEALEQESEASDEAAADKEFSVKETSSKQGSNHSLAFKEMTSSKDNMAKDRPVREHQSRNHRGKDSQGKKSKKDFQGRPPQGQSQKPQNTPKPQSAQNNQNNQNNQSAQNNQNNQNNQNIENSQP
>NZ_LR698998.1|WP_076134173.1|5741007_5742447_+|S41-family-peptidase
MKSNKVISALLGSCLALSLTFAPVVSAADAAQASTDNRDLINEVMNILENYNLSGVDKDTLIRGAIDGMVNTLDDPYSQYFNTEEAAQFEHDVDLEYVGIGVRLQYTATELYIEDITPGSPAEQAGLKRGDTIVKINGIPVEETEGDELSGAAGTKVTLQVLRNGVTKSFRVTRNEISSTSVTGTIVGQKIAYITLSGFTQNSDEEFAAMLKKMRAAGMKSMVLDLRDNLGGYMDSAYNITSNFMDKGIMMYTSDQTGALTPVTITSGSKIGVPVVILTNEYTASASEALTGALRDNKLATVVGTRSFGKARIQSLLPMSNGDMLKLTTQKYLTPNKEDFNHIGLAPDIEVKGKTAQLITALQIAGMKSIEISGDHHILNVNGVAFAGNVGLIKQGDKTYASSLVLGALIEGDITWDAKNKKVIVTNGAGKATGFTLSSKEALSQNGETFIELNAFKKKFPALVWSYNATQKQLKLSVK
>NZ_LR698998.1|WP_076134174.1|5739741_5740926_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MKKLLSLLSISLLALILAVPAFAASKPIDVYINGSKVSFTAGTPYLANNSVLVPFRVIFEKLGLQVLWDAKTGTVTGKSSNLAISLKIGSNRATVNGTVKKLTTAPVSSAGTTYIPLRFIAEATGGTAVWNSTSRSVQITTPVSKDKDEAAITALIRLSNKYFNEEKAISFYSLMDSESSNAESVADLNASFEIFDIKNTIESLEIIDISGNDATVYTLESSRRTGGAYTPDTEDEYMYTLVRKNGSWKISSVESQSSVILLTREQALKTAANIPQNDADAIKGNITKYYQAMNEQNSAAVLSTMTSYGEEYDTSLKEDLEDFFTSYDVTYTPSVSNIYYFSAKEAAIYVESKEKDASEEETFEQGTIFILSKSDSGVWTTDNTYSVYYKLVKS
>NZ_LR698998.1|WP_036685317.1|5738791_5739595_+|NAD-kinase
MRYYVLDRGDELSIKLAEQFHKLAAERDLQLDAESPEIVISIGGDGTMLHAFHTFIDQIPNLAFVGVHTGHLGFYADWQAEELPTLIDYMCGTGDSEPQKPRIVKYPLIELEIHKKSGSSSHIALNEFTLKGVDGTIMIQIDINDVTFEMFRGDGLCISTPSGSTAYNKSLGGAMVHPSIEALQIAEIASINNRVFRTMGSPLLLPKHHHCDIFSCKDQRLLLTVDHNNIPVDDLISVRCQVSDKKVSFARYRPFPFWNRVREAFLV
>NZ_LR698998.1|WP_076134175.1|5737454_5738717_+|sporulation-integral-membrane-protein-YlbJ
MTFKKIGGPLLGFILAGCMLLMLLHPEASLAAALRGLAIWWDVLFPSLFPFFVISEIMLGLGIVHLFGALLDPLMRPLFGIPGSGGFVAAMGYVSGYPVGAKLTAKLREQKLISRIEGERLVAFTTSSDPIFLLGAVSVGFFRDASLGLILALAHYGSGLMVGLLMSFHGRKEQKTPTQDPEKSSSDAPSAPAKQGFGRIHAALLAMSEARRKDGRSFGELLKGAIQSSLQLIIVVGGLVVFFNVLMELLARAGILPSLFSLAGSLVSLVGGPPELAQALISGLFEVTIGARSAGEAASSIPLQFKVAAAAFILSWGGLSVHAQVASILNGTGLRYLPFLTARLIHAVLAAGLVVLLWKPVMGSGLSSAWVSLPASTAFTPSASGVTASLALLSLILAAALLVSLLIPAFMAMLRLMRRS
>NZ_LR698998.1|WP_076134176.1|5736658_5737042_-|globin
MNPNESIYDNLGGAEALHRLVEVFYAKVQLHPQLGPLFPEDITPVLEKQYQFLTQFFGGGPLYSELHGHPMMRARHMHIPITPERAEEWLQCMKEALVETGVEEPLRSFVLSRLAGPAHHFVNMPQE
>NZ_LR698998.1|WP_111505495.1|5749507_5752510_-|fibronectin-type-III-domain-containing-protein
MKRKLWYVPVLITSILLSTVINLFVLAPQADAASIGTINENDTIYQIMVDRFNDGDSSNNATGAAIRYGENSEEDFRYMKGGDWQGVIDKLSYIKNMGYTAIWISPVAEPQMTNRENNGSGKNTAYHGYNVKDPNAANPYFGTKEKLKELVDSAHAVGIKVVIDVVPNHIGDYMLGTQAYYDIPSLQPAAPFNNPAWYHHNGDINWSLADGRYDQWAQDYLENHDLGGLDDIDFDVPAAKKAVFDSIKGWFDYTGADGARVDAAKLMKPTDIGELQNYLGVNTFGENFDGNAEFVSRWVGNNKEWGMLDFPMFFSVLNSFAYGQSFDSNIKSTLAQDSYYNGNANHMVTFIDNHDRNRFLTEAGGSVDKLQNALSFIFTVRGTPVVFQGTEQNKGNGNGQIMTGGIADTWNRWSMVKRDANGNVIENYFNENASTYKHVAKLNEIRKNNPALRTGTQREMWSAQNLYAFSRRIDTGTNLGQEVISVFSNKSSGSQTVTIPLRAESSLAVGTVLYNQLNTSDTVTVQSGGATGKQITVTVGANAAKIYAKQQLPTDTVAPTVPTNVTATVQNASSALVSWTASTDNVGVTGYEIYRNGVKVGTSATTSYTDNGLSASTTYDYTVKAMDAAGNLSLLSAIASVTTPAGNSVTIYYKQGYTSPYIHYRPAGGTWTTSPGVAIPVSDVAGYNKITINIGSASQLEACFNNGSGTWDSNGGSNYLFSAGTWTYTPTGNIQSGGPVTPTPTVTPTPTPTPTVTPTPTVTPTPTPTVTPTPTVTPTPTPTPTVTPTPTVTPTPTATPVGSTATIYYKNAAYSSSYIHYKLDGSTVWTTSPGEQLQASAFTGYKAVTIQLDTAAGLTAAFNNGSGTWDNNGGNNYHFAAGTWSIVNGNITAGEPQADSVTFRVTVPASTPVSGPVYLSGSFNSWNAADPNYQLTKGSDGIYSITLSLPAGTAIQYKVTRGAWTNVEVNSNGSDLSNRTLTPSGGAQTVNLTVQRWKDL
>NZ_LR698998.1|WP_111505497.1|5752754_5753423_-|alpha/beta-fold-hydrolase
MESCLFIHGFTGGEHEISPLSQFMEQHNYRSRTFTLKGHGGSRNDLLHSDRHDWQQSAEDELTELLKTNDGVHLIGFSTGALIASHLSVRYKPWIKSLTLLSTPVFPLNPVEIIKTLASFSMLKTYISKFSSTPPKATREFQRLVRESFSIYPHIETPTLIVQGKRDHLVKTRSADYLRHHMIKATQKQVLMVDNSGHMVCHCAEKDRIMNEVLQFIQTAGR
>NZ_LR698998.1|WP_111505499.1|5753576_5754158_-|hypothetical-protein
MPNQYVFNDNDQPLYVDMVNTFQSPDISAPPEISASQAAVLYSTNTSASSLVVLSLISAITSIRISNATGSGKTVYISRISGSIGGSSLLSAMSGSFTIVKGGTLTSPATLTPTNNNLGSAATSAMTVQSSTAAISGGTTLYNYQLAPGAFSQNFTGSIIVPPGTAICANVTSSSSAVGLTITSALGLLWWEQ
>NZ_LR698998.1|WP_076134163.1|5754175_5754712_-|hypothetical-protein
MPNDSVFNQSSQPLFTEQVNTYVAPGIDSAPEGGAAKAGLLFGIPFTSTVTTAAPLVVQISNPAGSGRTLYVSRVAASSATAAVTLSLLRNATVTGTTVTPINFNFGSALTSVMTARTSTTAPTGSPATLVSLLLAAGPVIVDFTGQIVVPPGNSITTSITIASGTSAATASISWWEY
>NZ_LR698998.1|WP_111505501.1|5754966_5755434_+|hypothetical-protein
MNEIHNGLELKKRSKIKHSKKQGNRSRNPQPFPPPNGRRNRRKVTISPLFSEHQFIGFPVSSSISPLPWQKSGTKTMISYAVMNQGDHPVSVRLEISPNSLDSFIDSEEIVAAKEMKVLVPSRFLKWTRISASTQQSTGLGKIDVYVQAQSIGMN
>NZ_LR698998.1|WP_111506405.1|5755933_5756839_+|hypothetical-protein
MLGATITAGTITSVLGATITAGTLSSAGTVTNILNGTITSVLGATITAGTLSSAGTISNILEGTITNVLGATITAGTLSSAGTVTNLLNGTITSVLGATITAGTLSSAGTVTNLLNGTITSVLGATITAGTLSSAGTVTNLLNGTITSVLGATITAGTLSSAGTVTNLLNGTITSVLGATITAGTLSSVTSISQRSFIEQTTTGIATANAYTPLPAVTTSILGTYSFFINNTGANPVNTRVEISADGTNYFVDTTGDNPLAAGSIDVIVPARFLKYTRLSYQSTNAGAASTINVSFNAQGT
>NZ_LR698998.1|WP_111505503.1|5756952_5758998_+|glycosyltransferase
MNNITLGVHLIVNNEADLLPHCLTSVAGVDEIVVIDTGSTDESIAISQAHGARVFQREWTENFAAARNEGLDQADTDWILVLDADERLQTPLPELRSLLQNTQAQAFTVHIDNWLGVRPEDKVKHSAVRLFRNGQGYRYSGRIHEGIDAAILKSHNISAIEHSDIEIEHFGYLPEIMARKNKIKRNEQLLRLALAEQPEDPFHSYNLAVTCCQDGRLQEAETLLRQTLHHVPLEASYRPTMIRDLCKIYLTQGKTNIIDLLLLPELERYEDYPDLHFLLGQSLESQGLLERAFQAYQRAASISGDQVSQKYVSEQGMNTFRPLYRLGLISERLEHQEDAARFYHRALQHHSLYRPALQGIASAFQRLAVPDEEIASLLIQLVPPTNAAHRAAIIDSLFEINANETITNLSRDTFPLELETANWMISSLLITGKLEDAYTTIRQTTSLASQDNHDLEYLKKWATLWAICSWSLFGEFHNDLLTYVPDELRFGLKYIQKCHQQQKVDPVEAEVDSLTLHSSFISDLIEQSVKLHQPALSDALVKLFPTFRSELAAALYKEGNRNEAGEHFIRLVSDQAADAKVLFYIGEMVFDKGHYTEASEWFQQALEQMPEHEAARVGLALCYLQQAKHSMEEALNSLDAANVHGPLQTDIGTIHKSIFLLNRTPWHTQWSFRQREGRTAK
>NZ_LR698998.1|WP_162636837.1|5758994_5760416_+|glycosyltransferase
MNMPSQQPLISLCMIVKNEADSLSQCLKSVRGVADEIIVVDTGSTDSTLQIALSFGAKVVHHPWNGDFAAARNAGLQQAHGQWILILDGDEELDAKSKGELLLCAEHLEYEAFFLRIHNHKGLTAASQTITVNPIIRLFRNRPQYRFSGIIHEQIAETIVKATPKAAMHLSTVVIHHYGYADGVVAKKDKIKRNVELLKEQLKLNPNDPFHHFNMAVEYMRLSEYQPALEHIKRSLNEAPPDTSYVHLLHKYQIRCLAELKDFNAALEACDLGITLHPDYPDLAHIKGVLLFQMGALAEAKTALLQALVIGEAPSGYHTEAGFGSYLTFYLLGQLCEEIGDETEACACYTKAAQLHPEPTPIITRLIRALKCAERENEISGWLHAHLPEYTAAKSGLLLDLLRIEGCDEAAKQLMKTTGQPSSNDSLFNPAYHPGCSELLLADRLLASLSSSPPYSPAAKRVRLALPLPRVSD
>NZ_LR698998.1|WP_111505507.1|5760431_5762381_+|glycosyltransferase
MTTPDITLCMIIKNEANHLEKCLSSVCGLVSEIIIADTGSEDNSKEIAQRFGAKIIDIPWENDFAKARNISLEYATSAWVLVLDADEAVDHWSENLLQPLLGAEYIHGYWLPIIHYVGDVPEADFVTDHVCRLFKNDKRIIFRGSIHEEIASSIWELPAGEIAYADLRIFHYGYLEDELMRKNKYNRNLALINKGLRLQPNHLFLRYALGAEYYQQGQYKEAAEILLPLLTDAPDSSGYVSDIYLKTAYALQLCGRKQEAEEVFRTGSGLFPDFTDLLESYALLLLEQGKLSSAKHFLEQALQSGNTAHKYPSSSGSGTYRTELLTGRVCEKLYQYPDAWRHYEAAIQHKPDYSEAWKELVPLSLLSGEKAQLRALSHSHLHTLSPDTLSYLLPAALNARDPEWQAELSAASQLPSSVQAALLAILEINNQPEHLQILAPLEQLLHDPSHLSNRSFVLGYLWAFSCRIGDTESAMRWLVCLLPYRPGILSIHHILAGNYSLKADLSDLNYAAQLLLHTGAWNSLLALYRHSQGSSFQWSSLPQPLLYGLLEAPTSIKKQWCSIYVSKPPHYHTPADCTEWQLYAAIAYSCGEMPILPVEDEAALRRVGGATAAVSLAYYKLQLAAEVYPQGIPSAHIPHALLLRSASRT
>NZ_LR698998.1|WP_111505509.1|5762406_5763144_-|glycosyltransferase-family-2-protein
MSSHRGPLRKTSGNRLTAIMQVRNEAGRYLEQVLEELSELVDDIVIVDDGSTDNTAQLCLSFAKVKKLVTLQSSLFNREWELRQTLWELAVSTNPDWLLSVDADEFYEESAKREMRRLIDQDVYDWVSFRLFDFWGGTTHYREDEHWNIHTKHTRTLVRYLPNFHYFFPKMDHHVPRLPLSYSVLPGFLTELRVKHYGWAISPEELRRKYSRYLELDPEGRWGSLEQYESILDEQPHLVEWQEEH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_16

5794371-5794513

Orphan

Consensus_repeat	Method
GGTGATCCGGGCGCGGTCGGCGTTGCCGGAGCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_16

>merge|NZ_LR698998|16|5794371-5794513|CRISPRCasFinder
GGGGACCCGGGCGCGGTCGGCGTTGCCGGAGCTACGGGTGCCACGGGTGATCCGGGCGCGGTCGGCGTTGCCGGAGCTACGGGTACTACGGGGGCGACTGGAGCGACCGGTGATCCTGGCGCGGTCGGCGTTGCCGGAGCTAC

>NZ_LR698998|16|16|5794371-5794513|CRISPRCasFinder
GGGGACCCGGGCGCGGTCGGCGTTGCCGGAGCTAC	GGGTGCCACGGGTGATCCGGGCGCGGTCGGCGTTGCCGGAGCTACGGGTACTACGGGGGCGACTGGAGCGACC
GGTGATCCTGGCGCGGTCGGCGTTGCCGGAGCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076206956.1\|5804320_5805364_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|214750
NZ_LR698998.1\|WP_111505521.1\|5788035_5790270_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_LR698998.1\|WP_111506407.1\|5806964_5807867_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LR698998.1\|WP_111505517.1\|5784072_5785683_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_LR698998.1\|WP_076206983.1\|5783116_5783998_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_LR698998.1\|WP_162636840.1\|5781235_5781403_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076134143.1\|5797808_5798870_-\|selenide,-water-dikinase-SelD	unknown	unknown	gnl\|CDD\|273100
NZ_LR698998.1\|WP_094903677.1\|5786656_5787532_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_LR698998.1\|WP_169744809.1\|5801106_5801280_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076134142.1\|5801364_5802165_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_LR698998.1\|WP_076134150.1\|5781556_5782957_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240539
NZ_LR698998.1\|WP_111505531.1\|5805384_5806917_-\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|350129
NZ_LR698998.1\|WP_172628860.1\|5779561_5780230_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505519.1\|5785751_5786645_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LR698998.1\|WP_076206964.1\|5796709_5797750_-\|tRNA-2-selenouridine(34)-synthase-MnmH	unknown	unknown	gnl\|CDD\|236982
NZ_LR698998.1\|WP_036685385.1\|5792091_5793084_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_LR698998.1\|WP_111505527.1\|5795561_5796674_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_LR698998.1\|WP_076130474.1\|5799509_5800319_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LR698998.1\|WP_111505529.1\|5802183_5804238_-\|alpha-glucuronidase	unknown	unknown	gnl\|CDD\|226187
NZ_LR698998.1\|WP_111505523.1\|5790356_5791799_-\|sucrose-phosphorylase	unknown	unknown	gnl\|CDD\|163564

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076206956.1\|5804320_5805364_-\|endo-1,4-beta-xylanase	gnl\|CDD\|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	5.27462e-131
NZ_LR698998.1\|WP_111505521.1\|5788035_5790270_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.01962e-22
NZ_LR698998.1\|WP_111506407.1\|5806964_5807867_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.02942e-60
NZ_LR698998.1\|WP_111505517.1\|5784072_5785683_-\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	8.57755e-45
NZ_LR698998.1\|WP_076134143.1\|5797808_5798870_-\|selenide,-water-dikinase-SelD	gnl\|CDD\|273100	TIGR00476, selenide_water_dikinase, selenium donor protein. In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide,water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence scoring well but not aligning to the beginning of the model is likely to have a selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence. The SelD protein also provides selenophosphate for the enzyme tRNA 2-selenouridine synthase, which catalyzes a tRNA base modification. It also contributes to selenium incorporation by selenium-dependent molybdenum hydroxylases (SDMH), in genomes with the marker TIGR03309. All genomes with SelD should make selenocysteine, selenouridine, SDMH, or some combination.	1.3763e-167
NZ_LR698998.1\|WP_094903677.1\|5786656_5787532_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.05884e-89
NZ_LR698998.1\|WP_076134142.1\|5801364_5802165_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	6.6096e-26
NZ_LR698998.1\|WP_076134150.1\|5781556_5782957_-\|MATE-family-efflux-transporter	gnl\|CDD\|240539	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	6.65827e-146
NZ_LR698998.1\|WP_111505531.1\|5805384_5806917_-\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|350129	cd18617, GH43_XynB-like, Glycosyl hydrolase family 43, such as Bacteroides ovatus alpha-L-arabinofuranosidase (BoGH43, XynB). This glycosyl hydrolase family 43 (GH43) subgroup includes enzymes that have been characterized to have alpha-L-arabinofuranosidase (EC 3.2.1.55) and beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activities. Beta-1,4-xylosidases are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Also included in this subfamily are Bacteroides ovatus alpha-L-arabinofuranosidases, BoGH43A and BoGH43B, both having a two-domain architecture, consisting of an N-terminal 5-bladed beta-propeller domain harboring the catalytic active site, and a C-terminal beta-sandwich domain. However, despite significant functional overlap between these two enzymes, BoGH43A and BoGH43B share just 41% sequence identity. The latter appears to be significantly less active on the same substrates, suggesting that these paralogs may play subtly different roles during the degradation of xyloglucans from different sources, or may function most optimally at different stages in the catabolism of xyloglucan oligosaccharides (XyGOs), for example before or after hydrolysis of certain side-chain moieties. It also includes Phanerochaete chrysosporium BKM-F-1767 Xyl, a bifunctional xylosidase/arabinofuranosidase. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	4.22749e-160
NZ_LR698998.1\|WP_076206983.1\|5783116_5783998_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.10817e-21
NZ_LR698998.1\|WP_111505519.1\|5785751_5786645_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.64982e-60
NZ_LR698998.1\|WP_076206964.1\|5796709_5797750_-\|tRNA-2-selenouridine(34)-synthase-MnmH	gnl\|CDD\|236982	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional.	2.06612e-107
NZ_LR698998.1\|WP_036685385.1\|5792091_5793084_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.89539e-106
NZ_LR698998.1\|WP_111505527.1\|5795561_5796674_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NZ_LR698998.1\|WP_076130474.1\|5799509_5800319_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.19168e-26
NZ_LR698998.1\|WP_111505529.1\|5802183_5804238_-\|alpha-glucuronidase	gnl\|CDD\|226187	COG3661, AguA, Alpha-glucuronidase [Carbohydrate transport and metabolism].	0
NZ_LR698998.1\|WP_111505523.1\|5790356_5791799_-\|sucrose-phosphorylase	gnl\|CDD\|163564	TIGR03852, sucrose_gtfA, sucrose phosphorylase. In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism.	0

>NZ_LR698998.1|WP_036685385.1|5792091_5793084_+|LacI-family-DNA-binding-transcriptional-regulator
MASIKDVAKEAGVAVATVSRVMNNRGYISKETRKKVEQAMDALDYHPNQIARALQKNQSFFIGIIVPDSNHPFFSDLIKYVEMSANEKNYKLLICNSLDDPEKEANYISMLRQNQVDGIIMCSHTMNIESYKKVPFPIVSFDRFISSNIPCVGSDNYRGGELATEHLIQLGCKRLLHISGPLDLDILANRRRDAFVITSMKHGVTYDIIEGAHNKLTFDYFWSFVTENISPAQLREYDGVFCSNDIVAYALYIYAEQQGIRVPEQLKIIGYDYHSFTRMLQSPKLTTIMQPSDRIGVMLTNTLLQMIESADGELINNTTVDVTLIKGETT
>NZ_LR698998.1|WP_111505523.1|5790356_5791799_-|sucrose-phosphorylase
MQIKNEAMLITYADSMGNNLKELNEVLDTHLQGVVGGVHLLPFYPSSGDRGFAPMDYTKVDSAFGDWAEIEQMSEKFYMMYDFMINHISQQSPYFQDFLEKKDASQYKDLFIRYKDFWPNGEPTEVDVDLIYKRKPRAPYVEVTFKDGTKEKVWCTFDEQQIDLDVTTETTKKFVKDNLTFLADKGASIIRLDAFAYANKKMGTNCFFVEPDIWEMLNLSKKVVEPYGVTVLPEIHEHYSIQLKIADKDYYVYDFALPMLVLHALYSGKVNRLAHWLEICPRKQFTTLDTHDGIGVVDVKDLMTDGEAEMTRESLYSQGANVKKKYSSAAYNNLDIYQINCTYYSALGNDDQAYLLARAIQCFAPGIPQIYYVGLFAGENDIELLESTKEGRNINRHYYSKDEIAAEVQRPVVQKLFALLKFRNSCPAFNGEIKIEQGNENELNITWKNENTVAKLEANLLTKEYTILAGENEANITKVF
>NZ_LR698998.1|WP_111505521.1|5788035_5790270_+|AraC-family-transcriptional-regulator
MKNNDLRRKRLLYGKLLTTITLCISLTLLISTFVYYTYYIGVEKTQTFRSDLRDLTQTGKKVVNMAEVAQTLSFQLYRTSTISHLLFYNKPSIYEVTAAMSDLGNYLNSMPYIESIYVYNPNNDTVYISAAQGQNGVFTTRELVDTEIIQMLNHYQDYKAFTPIPRTYSIDQPEKKTISVYTYLCYDAINWDRSINSAVIVNISAAWINKELANGNTPGSGSTYILDDQGRFLSGNKLTLEKLSGDENSWLEHQVKARSAGYFTAPFRGNKSLVSYTSPDSLGWQYVRITPYEVITEQTNHIRNTTLLISLIILLFGLVISRVLSKRLYLPIDSIVSRMNTLEADKRNSMFTIRQNSLRNLVLGIKSPHNSRQNDVQQLGISFNLNEGYRLVLLRIDEYEALRKERGSYLLPYKFAIMNIASEICGQTYQVETVDMNDDSVVMLLSSMTSTEHLDTELIEVLLRQIRVACCDYLKIGLSLVYSPISDNPDVLNRLYSQAREASKHRLFYGHGSLINAERISELHNNLYSYPADSEKKLVDALTSGRTDEARSHFSEMVREMEQYPYHVLELTVSRVTLTIKRIVDNIKKLSPASTEGIMVMPSLEHYETIEEFEAAFYQLFDHIQEFQADKRSSKQSDLIRQINQTIQQSYMDPCLSLNQIADELNMSPIYVSRLYKQQTLTTIVDVIMEVRMKEVCRLLVESDLSVSDIAEVTGFTSSSYLHRMFKRNFSLTPIEFRRTKNSS
>NZ_LR698998.1|WP_094903677.1|5786656_5787532_-|sugar-ABC-transporter-permease
MFLMLLPTLIFFLVNSYFPMVGIYYAFTQFDFNSSMFNSKFVGLQNFEFLWRSGTLVKLTMNTIGYNIAFIVLGNVLAIVCAILLSELNGKWFKKISQSVMFLPYFVSFVILSVIVYNLFNYDSGFLNTMLTQFGLDPVDVYSKPWAWIFLIIIFYLWKNLGYSMVIYLAAITGISDEYYEAAKIDGANIFQRIWYITVPMLKSTFVVLLLFALGSIMKGQFDLFYQLIGNNGLLYNTTDILDTYVYRSLKVTFDVGMATAAGVYQSLFGFVLIMTVNYIIRKINDDYALF
>NZ_LR698998.1|WP_111505519.1|5785751_5786645_-|carbohydrate-ABC-transporter-permease
MKIQKDKYTRTLHWIAYVVIIGLSLACLLPFLLIISASLTSNESIIRDGYHLIPAQFSLEGYKTVFIFPDEVLRAYAVTVSTTAIGTVMGLFFMTMAGYVLARKDFKYRNSFSFYIYFTTLFGGGLVPWYIMITKYLGLLDSYAVLVLPGLMTPFLIILMKNFIKSAVPEELFDSGKIDGAGDFRIYWQIVLKLSMPGIATVGLFLALYYWNDWFTSSLFINDTHKYQLQFYLYNVINSAQFIAQMGAGTGVSLATEVPAESTKMAMAIVVTGPILFLYPFVQRYFVKGLTIGAVKG
>NZ_LR698998.1|WP_111505517.1|5784072_5785683_-|extracellular-solute-binding-protein
MQMNKQRGKRMSILLTSVLGLTLLAGCGGNSNSANGDNAAVKESNSGGNTAQSTNAGTEEKTGLDTSKKVELQFYMLGDAPKDLSSIEAEINKMAEEDLNATVKFNYTTWTDWDQKYKLLLSSGQSIDLIFTADWTQYQAYAKKGAFLAIDDLLPKAAPELQKFVPQEMWDAVKIDGKIYTVPATYKEYVTNGFVWREDLRKKYNLPQPTDLASYEAYMEGIKKNEPQMSPASFNSDVRGNIHDGYSTLTSQVGSPLPYGIGIKYDDPSKAYLYWGSEEHKEELLTMRRWQENGLISKNVLNLKDTIQAPIIAGKAASIFGDNPTRFNDTLMKVKAAHPDWDLGYYPYGNTIGYATPVHPIHNGFAIPKSSKNPERALAFYEKMVMDKRYNQLTQYGVEGKNYKIDANGYYELIGDASTNGFTREGMNGWAWRNPEFMLFDKSYDGVKEIFAELDKIQKPDIFTGFAEDYTSYQAEKAALEQVEKQYLYPLQAGLVEDVDAGLATFMEKAKQAGLEKIQTEYIKQWDAYVQEKGLK
>NZ_LR698998.1|WP_076206983.1|5783116_5783998_+|AraC-family-transcriptional-regulator
MNILNFTVPPLLYYIVSGFHTFSPGHYHMSRHNTRVFDLLVVKQGCLYMSEGGLPFQVKAGQALLLRPDSHHFSTDSCKESTSYYWLHFQTVGDWNMTEDTAAALEKDNVKIENSLQSDEFDIRPFSLRLPQYTTLLQPSKMEELLSQLNQLVPNSHLSDTPFQQQLLFQEVIQQLSASLSHERPSPSKICAEQAASYLRSHFREHITAQQLGESLSFHPVYIARCMKKEYGCAPMEYLLHYRIQQSKLLLMQTSYTIARIAEEVGFNQAPYFSSSFIRIEGTTPREFRQRFS
>NZ_LR698998.1|WP_076134150.1|5781556_5782957_-|MATE-family-efflux-transporter
MVKKERQGFGLWVLAWPIFIEVFLQTLLGTVDTLMVSRISDDAVAVVGISNQLFGALTTLFTTFAGGAGILIAQRMGSKRFGEARTIAIMGVSVSLVLGIVVSIVLFFYAGPIGGVLNIAPELLSLSNVYISYVGGGLFMVGMIASLGTAIRNTGNTKGPMYTGIIINVIHIILNYIFIFGVFGLPQLGLAGIAISSIVSRLVGVIILYSLFRRSFEIKVRLRDFRIFNGKLFKQILKIAWPLGINSSCWVFSQLIVYSFLAALGAEALAARTYLNTLESFCFTLGYAFALAGQIQIAHLFGAGKLKEAYRSAYRTLFIGLSIVSANMMLLFLFGKQLLGYFTSDPKIIAIGVSLLALNLLLQPSKMLNMALGNALNAIGDTRYTMYTSIVSMSLIGVGCSYWLGIGVGWGLMGIYCCMIADELVRGLLVLARWRGRKVLRQADIGLCEENASLHGAGKRSASLTT
>NZ_LR698998.1|WP_162636840.1|5781235_5781403_-|hypothetical-protein
MGWLRAAVGWLRVAVGWLRAAVGWLRAAVGWLGAVVGCSRAGRCAFGLSCSYLPV
>NZ_LR698998.1|WP_172628860.1|5779561_5780230_-|hypothetical-protein
MLVLLSGCSKGTAHVTVNKNGSVDFAVNMKVNSRAEALISGKMEDALINKLKDQGIELEKSQDGKSTVYEFMKSYASFEDMKALSGDLDIVDLKLDTKDYWFYTKYDVEAKPKLNSYIDTIMDNMGSLSLSKPIIRAFLQNMAFDFKLTLPVDLYGDNNANVEDGRTLTWNVTLADTEPIQMQVYVPNVWNIVIVLIILVVVIVTAIILFVRKRKQRNRKRF
>NZ_LR698998.1|WP_111505527.1|5795561_5796674_-|cysteine-desulfurase
MIYLDYNATTPVDKEVAEVMIPYLYGHFGNPSSSHSLGREAKLGIEQARIQVADFLNCAPGEVLFTSGGSESNNTVIKGVAQTYRHEGNHIILSAIEHPAVIKPCQYLEQMGYNLTYVPVDSYGLVQVDDVKKQLTDQTILVSIMHSNNETGTIQPIKEIAEVCHERGILMHTDASQSAGKVDLDIADLGVDFLTLAGHKLYAPKGIGALYIRDGIHIEPLIHGAGHEQGRRAGTENTPYIIGLGKACELAAESDSRERVKQVTDYFYGRLQESFGEKIHLNGHKHKRLPNTLNVSFLGAVGHEIIASLEDVAASTGSACHSGETLISPVLKAMHVSENIGRGAVRFSVGRYTTIAEIDEVIDKLKVYLL
>NZ_LR698998.1|WP_076206964.1|5796709_5797750_-|tRNA-2-selenouridine(34)-synthase-MnmH
MFQDITLEELRVLKNKKQITIIDVRSPSEYKDATLPDSLNIPFFDDQERAEVGTLYKQTSVQAAKERGLEIAAAKLPSFVKEFAAIQGDKAVFCWRGGMRSRTTATVLSLMDIHAYRLIGGYKAYRKWVLDELESYEFKAKSYVIHGNTGTGKTNLLHRLKVHGYPVLDLEGMAGHRGSIFGEIGLRANNQKTFDSLLLEELIKIGDSPYVLFEAESKKIGKIVMPPFMTEQKEIGTQIWIEMPLQARVQQILEDYRPEEYKEQCISAFRSIKSRIHIPVAAEIERCLQADLFGEAVALLLEYYYDPRYDYTSTQYEGIERVTFKVNNLDEAETAVRSFLKHQDEV
>NZ_LR698998.1|WP_076134143.1|5797808_5798870_-|selenide,-water-dikinase-SelD
MSQAETIKLTSLSSKGGCGCKIGPADLMQVIRSLPPTVPNPDLLVGLDTSDDAGVYRLSDELALVQTVDFFTPIVDDPYSFGQIAAANALSDIYAMGGKPLTVLNIVAFPISVLDKSVLGDILRGAADKVQEAGATLVGGHSIDDKEPKFGLAVTGLVHPDKVRTNAGAKVGDKLILTKPIGVGILTTSIKKDQLSPEETTRLTTVMSTLNKKAAEIMEPYDVHACTDVTGFGLLGHASEMAKGSNRGLIIRQGDVPMLPRVRELAEQGFVPGGTKNNFAHLEGSILYPEEMDQLSRYILCDAVTSGGLLISVTPEQSEDLLKTLVDAGVEAALIGEVTEEHPGQITVIAAAK
>NZ_LR698998.1|WP_076130474.1|5799509_5800319_-|alpha/beta-hydrolase
MPIAKLNGTSLYYEINGTGTPVVFIHGHGLTHSMFKPQLEYFSDKYKVILCDLRGNGKSGKLLEAPHEIIETQCLDLIMLLNDLGIREAVFVGIAYGGLVVQHIAKQYPERVKAIVVADSFCRTHGSTIVGKIQTMAAYCSLLMYYLPSELVLPSIRMMYRERWSLAYNEIRRGLLDKRPRELYRQRLATSHVDYTRCLKAFKRPALCIVGDFNEFGVNCMKEMVSQLPQAQLAIIPNALDPSNLCQPEQFNAILQRFLEKQQGSQQIS
>NZ_LR698998.1|WP_169744809.1|5801106_5801280_-|hypothetical-protein
MEIPLEADEVLSRIKKLQSDGSSISKKQVKQSDPELMRSALFFFPSWEHALKNADLL
>NZ_LR698998.1|WP_076134142.1|5801364_5802165_-|Nif3-like-dinuclear-metal-center-hexameric-protein
MIVNLTIRAILEDLMGTVEQVEGTVDILNPGEPETEVTGIITAFSATQNIVEQAIALGANLLITHEGVFYSHHAASEWLEGDPVYHAKKSLIGHSPIAIFRYHDYWHRQEPDGIMIGLLRELDWSDYVEEQQAAATILTIPAMTVMEAAQYIKSKLGISYVRAAGDLSLSCKRVGILVGYRGGGTMAIPLFNDHNLDLIIAGEGPEWETPEYVRDAGHQGRSKALIMLGHAESEAPGMKYLAEILADKYPMLPTRFIAEQPIYQMV
>NZ_LR698998.1|WP_111505529.1|5802183_5804238_-|alpha-glucuronidase
MTNTAYEAWLNYGQLKSGSLYNQYINWCGELVVTEDNETIQAAAAEFIQGMTSMLGKAPLLTAQPEGPCIVIGTFQGGNPLIGRVFAGERTDSLGAEGFLIRTNATEQCVAIGASTPVGILYGVFHLLRLIGTESEIDALNLSMSPVNGLRMINHWDNFDGSIERGYAGRSFFYESNQFLNDTKRLRDYARLMSSVGINAISINNVNVHELESLFITEQYLPDIALIAGIFRVYGIKLFLSANFASPIQIGALETADPLDPAVRQWWKDKADEVYRAIPDFGGFVVKADSENRPGPFTYGRDHADGANMLGEALEPFGGIVIWRCFVYNCKQDWRDRKTDRARAAYDHFKPLDGRFNDNVVLQIKNGPMDFQVREPVSPLFGALEHTNHLMEFQIAQEYTGQQRHLCYLVPQWKEVLDFNTYAKGQTTLVKHIVDGSVWGNKYNGVAAVTNVGDDMNWTGHGLAQANLYGYGRLIWNPELTAKEIAEEWIRLTFGTDKGLVAAIRGMLMDSWRIYESYTAPLGVGWMVNPDHHYGPNVDGYEYAKWGTYHYADHKGIGVDRSVKSGTGYSGQYMGLNASNYENLASCPEELLLFFHHVPYTHVLQSGQTIIQHIYDTHFEGAEQAAQLLATWESLEGSMDSGLYIQVKHRLEEQAEHAQEWRDRINTYFYRKSGIEDFKGRKIY
>NZ_LR698998.1|WP_076206956.1|5804320_5805364_-|endo-1,4-beta-xylanase
MRLSGGNLLRQASDYTEPALKTIFAEDFKIGAAVNPLTIQSQEHLLAYHFNSITAENEMKFESLHPLEDIYNFKLADQLVAFARKHHMAMRGHTLVWHNQTTDWLFEDKKGGPVSKETLLARLKSHIQTVVGRYKEDIYAWDVVNEVIADEGEELLRQSKWLDIVGPEFIGKAFEFAHEADPKALLFYNDYNESNPLKRDKIYKMVKSLLEQGVPIHGVGLQAHWNLYDPSLDDIRAAIDKYASLGLQLQLTELDVSMFRFDDKRIDLKVAPAELLELQAERYEAMFALLKEYRDVISSVTFWGAADDYTWLDGFPVRGRKNWPFLFDEQHNPKPAYHQLLNAVTKS
>NZ_LR698998.1|WP_111505531.1|5805384_5806917_-|glycoside-hydrolase-family-43-protein
MTPSSITYTNPILPGFYPDPSITRAGDDYYLVCTSFEYFPGVPIFHSQDLIHWTQIGHVLNRVSQLDTRKSKSSGGIFAPTIRYHEGTFYMITTEVHGKGNFYVMATDPAGPWSDPISIPYGGIDPSLMFDEDGKVYVTTQQGADYDSHAIQYEIDIATGAALTEPVVIWTGDGGPWTEGPHLYKINGMYYIMTASGGTAKEHREIIGRSSSPYGPFERLPYPILTHSGTDNPIQYLGHADLIEDRNGDWWAVFLGVRLVDAKFTVLGRETFLAPVSWTEDGWPMIDNNDDTVGLEMKVSRVPGQSPKPETSGRYNFDDQVLPLGLAFLRNPAEGSWSLNERQGWLSLRGQSSGLSEVGQVAFVGRRQQHTSAEWSTLLEMPSSIADVEAGLCARLDENAHYEIGLVQKNGQKVITAHVTMDGVTHTAAEVSTTAERIYLKVKAELTEYSLFYSLDGQEWNMLSTAAAYPLSPQAVKGNGFTGVLIGLYATGHGKVAEVPAYFDWFDYQS
>NZ_LR698998.1|WP_111506407.1|5806964_5807867_-|carbohydrate-ABC-transporter-permease
MRNLRFEPVMFGTFNTIFMVCLVIVTLYPFLNTIAVSFNAGNDTIRGGIYLWPREWTIQNYKAVFASGTIIPAFWISVARTVISTILNLFLTTMLAYTLSRKEYVFRKQITFIFVLTMYFNAGLIPNYFLIKDLHLINTFWVYVIPTMISAFNMIVIRTYIGGLHESLMESARIDGAGEFKIFMKVVFPLCKPVLATIALFVAVGAWNSWFDAFIYTSSRQHLSTLQYELMKLISSSMNANSNASVANGAGVTAESAGSMVTPKSIRAAVTIVASVPILLVYPFMQKYFVVGMNVGSVKE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_17

5799232-5799419

Orphan

Consensus_repeat	Method
TCATTTTAGGGAGGATTTCCCTAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_LR698998_17

>merge|NZ_LR698998|17|5799232-5799419|CRISPRCasFinder
GGTTTTTAGGGAATTTCTCCCTAAAAATTCATGCAAATACCCATTTATGGCTAAAAACATCCTATTATTAGGGAAGTTTTCCCTAATTCACGTTCTAGGAGCCAGAATCTCCTTCATTTTAGGGAGGATTTCCCTAATCTACGTTCTAGGAGCCATGCTCTCGATCATTTTAGGGAGAATTTCCCTAA

>NZ_LR698998|17|17|5799232-5799419|CRISPRCasFinder
GGTTTTTAGGGAATTTCTCCCTAA	AAATTCATGCAAATACCCATTTATGGCTAAAAACATCC
TATTATTAGGGAAGTTTTCCCTAA	TTCACGTTCTAGGAGCCAGAATCTCCT
TCATTTTAGGGAGGATTTCCCTAA	TCTACGTTCTAGGAGCCATGCTCTCGA
TCATTTTAGGGAGAATTTCCCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076206956.1\|5804320_5805364_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|214750
NZ_LR698998.1\|WP_111505521.1\|5788035_5790270_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_LR698998.1\|WP_111505525.1\|5793248_5795108_+\|collagen-like-repeat-preface-domain-containing-protein	unknown	unknown	gnl\|CDD\|274746
NZ_LR698998.1\|WP_111505517.1\|5784072_5785683_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_LR698998.1\|WP_111506407.1\|5806964_5807867_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LR698998.1\|WP_111505533.1\|5810801_5812337_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_LR698998.1\|WP_076098803.1\|5807926_5808895_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_LR698998.1\|WP_076134143.1\|5797808_5798870_-\|selenide,-water-dikinase-SelD	unknown	unknown	gnl\|CDD\|273100
NZ_LR698998.1\|WP_111505519.1\|5785751_5786645_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LR698998.1\|WP_169744809.1\|5801106_5801280_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076134142.1\|5801364_5802165_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_LR698998.1\|WP_111505531.1\|5805384_5806917_-\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|350129
NZ_LR698998.1\|WP_076098804.1\|5808979_5810686_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270300
NZ_LR698998.1\|WP_094903677.1\|5786656_5787532_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_LR698998.1\|WP_076206964.1\|5796709_5797750_-\|tRNA-2-selenouridine(34)-synthase-MnmH	unknown	unknown	gnl\|CDD\|236982
NZ_LR698998.1\|WP_036685385.1\|5792091_5793084_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_LR698998.1\|WP_111505527.1\|5795561_5796674_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_LR698998.1\|WP_076130474.1\|5799509_5800319_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LR698998.1\|WP_111505529.1\|5802183_5804238_-\|alpha-glucuronidase	unknown	unknown	gnl\|CDD\|226187
NZ_LR698998.1\|WP_111505523.1\|5790356_5791799_-\|sucrose-phosphorylase	unknown	unknown	gnl\|CDD\|163564

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076206956.1\|5804320_5805364_-\|endo-1,4-beta-xylanase	gnl\|CDD\|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	5.27462e-131
NZ_LR698998.1\|WP_111505521.1\|5788035_5790270_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.01962e-22
NZ_LR698998.1\|WP_111505525.1\|5793248_5795108_+\|collagen-like-repeat-preface-domain-containing-protein	gnl\|CDD\|274746	TIGR03721, exospore_TM, BclB C-terminal domain. This domain occurs as the C-terminal region in a number of proteins that have extensive collagen-like triple helix repeat regions. Member domains are predicted by TmHMM to have four or five transmembrane helices. Members are found mostly in the Firmicutes, but also in Acanthamoeba polyphaga mimivirus. Members include spore surface glycoprotein BclB from Bacillus anthracis, a protein of the exosporium. The exosporium is an additional outermost spore layer, lacking in B. subtilis and most other spore formers, consisting of a basal layer and, above it, a nap of fine filaments.	1.48169e-38
NZ_LR698998.1\|WP_111505517.1\|5784072_5785683_-\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	8.57755e-45
NZ_LR698998.1\|WP_111506407.1\|5806964_5807867_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.02942e-60
NZ_LR698998.1\|WP_111505533.1\|5810801_5812337_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.72618e-48
NZ_LR698998.1\|WP_076098803.1\|5807926_5808895_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.70291e-123
NZ_LR698998.1\|WP_076134143.1\|5797808_5798870_-\|selenide,-water-dikinase-SelD	gnl\|CDD\|273100	TIGR00476, selenide_water_dikinase, selenium donor protein. In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide,water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence scoring well but not aligning to the beginning of the model is likely to have a selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence. The SelD protein also provides selenophosphate for the enzyme tRNA 2-selenouridine synthase, which catalyzes a tRNA base modification. It also contributes to selenium incorporation by selenium-dependent molybdenum hydroxylases (SDMH), in genomes with the marker TIGR03309. All genomes with SelD should make selenocysteine, selenouridine, SDMH, or some combination.	1.3763e-167
NZ_LR698998.1\|WP_111505519.1\|5785751_5786645_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.64982e-60
NZ_LR698998.1\|WP_076098804.1\|5808979_5810686_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.84663e-163
NZ_LR698998.1\|WP_076134142.1\|5801364_5802165_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	6.6096e-26
NZ_LR698998.1\|WP_111505531.1\|5805384_5806917_-\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|350129	cd18617, GH43_XynB-like, Glycosyl hydrolase family 43, such as Bacteroides ovatus alpha-L-arabinofuranosidase (BoGH43, XynB). This glycosyl hydrolase family 43 (GH43) subgroup includes enzymes that have been characterized to have alpha-L-arabinofuranosidase (EC 3.2.1.55) and beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activities. Beta-1,4-xylosidases are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Also included in this subfamily are Bacteroides ovatus alpha-L-arabinofuranosidases, BoGH43A and BoGH43B, both having a two-domain architecture, consisting of an N-terminal 5-bladed beta-propeller domain harboring the catalytic active site, and a C-terminal beta-sandwich domain. However, despite significant functional overlap between these two enzymes, BoGH43A and BoGH43B share just 41% sequence identity. The latter appears to be significantly less active on the same substrates, suggesting that these paralogs may play subtly different roles during the degradation of xyloglucans from different sources, or may function most optimally at different stages in the catabolism of xyloglucan oligosaccharides (XyGOs), for example before or after hydrolysis of certain side-chain moieties. It also includes Phanerochaete chrysosporium BKM-F-1767 Xyl, a bifunctional xylosidase/arabinofuranosidase. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	4.22749e-160
NZ_LR698998.1\|WP_094903677.1\|5786656_5787532_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.05884e-89
NZ_LR698998.1\|WP_076206964.1\|5796709_5797750_-\|tRNA-2-selenouridine(34)-synthase-MnmH	gnl\|CDD\|236982	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional.	2.06612e-107
NZ_LR698998.1\|WP_036685385.1\|5792091_5793084_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.89539e-106
NZ_LR698998.1\|WP_111505527.1\|5795561_5796674_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NZ_LR698998.1\|WP_076130474.1\|5799509_5800319_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.19168e-26
NZ_LR698998.1\|WP_111505529.1\|5802183_5804238_-\|alpha-glucuronidase	gnl\|CDD\|226187	COG3661, AguA, Alpha-glucuronidase [Carbohydrate transport and metabolism].	0
NZ_LR698998.1\|WP_111505523.1\|5790356_5791799_-\|sucrose-phosphorylase	gnl\|CDD\|163564	TIGR03852, sucrose_gtfA, sucrose phosphorylase. In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism.	0

>NZ_LR698998.1|WP_076134143.1|5797808_5798870_-|selenide,-water-dikinase-SelD
MSQAETIKLTSLSSKGGCGCKIGPADLMQVIRSLPPTVPNPDLLVGLDTSDDAGVYRLSDELALVQTVDFFTPIVDDPYSFGQIAAANALSDIYAMGGKPLTVLNIVAFPISVLDKSVLGDILRGAADKVQEAGATLVGGHSIDDKEPKFGLAVTGLVHPDKVRTNAGAKVGDKLILTKPIGVGILTTSIKKDQLSPEETTRLTTVMSTLNKKAAEIMEPYDVHACTDVTGFGLLGHASEMAKGSNRGLIIRQGDVPMLPRVRELAEQGFVPGGTKNNFAHLEGSILYPEEMDQLSRYILCDAVTSGGLLISVTPEQSEDLLKTLVDAGVEAALIGEVTEEHPGQITVIAAAK
>NZ_LR698998.1|WP_076206964.1|5796709_5797750_-|tRNA-2-selenouridine(34)-synthase-MnmH
MFQDITLEELRVLKNKKQITIIDVRSPSEYKDATLPDSLNIPFFDDQERAEVGTLYKQTSVQAAKERGLEIAAAKLPSFVKEFAAIQGDKAVFCWRGGMRSRTTATVLSLMDIHAYRLIGGYKAYRKWVLDELESYEFKAKSYVIHGNTGTGKTNLLHRLKVHGYPVLDLEGMAGHRGSIFGEIGLRANNQKTFDSLLLEELIKIGDSPYVLFEAESKKIGKIVMPPFMTEQKEIGTQIWIEMPLQARVQQILEDYRPEEYKEQCISAFRSIKSRIHIPVAAEIERCLQADLFGEAVALLLEYYYDPRYDYTSTQYEGIERVTFKVNNLDEAETAVRSFLKHQDEV
>NZ_LR698998.1|WP_111505527.1|5795561_5796674_-|cysteine-desulfurase
MIYLDYNATTPVDKEVAEVMIPYLYGHFGNPSSSHSLGREAKLGIEQARIQVADFLNCAPGEVLFTSGGSESNNTVIKGVAQTYRHEGNHIILSAIEHPAVIKPCQYLEQMGYNLTYVPVDSYGLVQVDDVKKQLTDQTILVSIMHSNNETGTIQPIKEIAEVCHERGILMHTDASQSAGKVDLDIADLGVDFLTLAGHKLYAPKGIGALYIRDGIHIEPLIHGAGHEQGRRAGTENTPYIIGLGKACELAAESDSRERVKQVTDYFYGRLQESFGEKIHLNGHKHKRLPNTLNVSFLGAVGHEIIASLEDVAASTGSACHSGETLISPVLKAMHVSENIGRGAVRFSVGRYTTIAEIDEVIDKLKVYLL
>NZ_LR698998.1|WP_111505525.1|5793248_5795108_+|collagen-like-repeat-preface-domain-containing-protein
MNRRSSRRRYRNMPDYRPFKSDAILNKHGRISSPIRKRECNALLKIVTDLSAVVPPVLTTPTTLHIANLQRVLRELLEFLHTSKLCSPFRTELLSVVEITIVSTEVNPFSVVSVGTNLQLLLAELLSFILATKIDSNCKDQLIIQIRHIQASITQAIGLPIKGVTGPQGPQGPQGPQGPQGSQGVPGATGTTGAGLQGIVAFNPALSPTYPAGQVVTFNGSTYIATVAGPTGTPGSSPDYLLIAGGSTGPQGPQGPQGTPGLQGPQGPQGVGLQGIVIFNPAQSPTYPAGQVVTFNGSTYIATVSGPTGIPGSSPDYLLIAGGAMGPQGPQGPQGIQGPTGAQGPAGPGVGATGATGSTGAAGLAGPAGATGATGDPGAVGVAGATGATGDPGAVGVAGATGTTGATGATGDPGAVGVAGATGVTGATGDPGAIGATGITGVTGATGNGAIIPLASGGPIIMTTVLGGLVGTTSLVGFGSSATGISLVGGNIDLTGTLLGPLINFAFSTPRAGVITSIAAYFSNTIALSLLGTTINVTAQLYQSATPNNTFTPIPGATVPLPPITGTINLGTFVSGITNGINFAVTPQTRLLMVFSATATGLTLVNTVTGYASAGFTIV
>NZ_LR698998.1|WP_036685385.1|5792091_5793084_+|LacI-family-DNA-binding-transcriptional-regulator
MASIKDVAKEAGVAVATVSRVMNNRGYISKETRKKVEQAMDALDYHPNQIARALQKNQSFFIGIIVPDSNHPFFSDLIKYVEMSANEKNYKLLICNSLDDPEKEANYISMLRQNQVDGIIMCSHTMNIESYKKVPFPIVSFDRFISSNIPCVGSDNYRGGELATEHLIQLGCKRLLHISGPLDLDILANRRRDAFVITSMKHGVTYDIIEGAHNKLTFDYFWSFVTENISPAQLREYDGVFCSNDIVAYALYIYAEQQGIRVPEQLKIIGYDYHSFTRMLQSPKLTTIMQPSDRIGVMLTNTLLQMIESADGELINNTTVDVTLIKGETT
>NZ_LR698998.1|WP_111505523.1|5790356_5791799_-|sucrose-phosphorylase
MQIKNEAMLITYADSMGNNLKELNEVLDTHLQGVVGGVHLLPFYPSSGDRGFAPMDYTKVDSAFGDWAEIEQMSEKFYMMYDFMINHISQQSPYFQDFLEKKDASQYKDLFIRYKDFWPNGEPTEVDVDLIYKRKPRAPYVEVTFKDGTKEKVWCTFDEQQIDLDVTTETTKKFVKDNLTFLADKGASIIRLDAFAYANKKMGTNCFFVEPDIWEMLNLSKKVVEPYGVTVLPEIHEHYSIQLKIADKDYYVYDFALPMLVLHALYSGKVNRLAHWLEICPRKQFTTLDTHDGIGVVDVKDLMTDGEAEMTRESLYSQGANVKKKYSSAAYNNLDIYQINCTYYSALGNDDQAYLLARAIQCFAPGIPQIYYVGLFAGENDIELLESTKEGRNINRHYYSKDEIAAEVQRPVVQKLFALLKFRNSCPAFNGEIKIEQGNENELNITWKNENTVAKLEANLLTKEYTILAGENEANITKVF
>NZ_LR698998.1|WP_111505521.1|5788035_5790270_+|AraC-family-transcriptional-regulator
MKNNDLRRKRLLYGKLLTTITLCISLTLLISTFVYYTYYIGVEKTQTFRSDLRDLTQTGKKVVNMAEVAQTLSFQLYRTSTISHLLFYNKPSIYEVTAAMSDLGNYLNSMPYIESIYVYNPNNDTVYISAAQGQNGVFTTRELVDTEIIQMLNHYQDYKAFTPIPRTYSIDQPEKKTISVYTYLCYDAINWDRSINSAVIVNISAAWINKELANGNTPGSGSTYILDDQGRFLSGNKLTLEKLSGDENSWLEHQVKARSAGYFTAPFRGNKSLVSYTSPDSLGWQYVRITPYEVITEQTNHIRNTTLLISLIILLFGLVISRVLSKRLYLPIDSIVSRMNTLEADKRNSMFTIRQNSLRNLVLGIKSPHNSRQNDVQQLGISFNLNEGYRLVLLRIDEYEALRKERGSYLLPYKFAIMNIASEICGQTYQVETVDMNDDSVVMLLSSMTSTEHLDTELIEVLLRQIRVACCDYLKIGLSLVYSPISDNPDVLNRLYSQAREASKHRLFYGHGSLINAERISELHNNLYSYPADSEKKLVDALTSGRTDEARSHFSEMVREMEQYPYHVLELTVSRVTLTIKRIVDNIKKLSPASTEGIMVMPSLEHYETIEEFEAAFYQLFDHIQEFQADKRSSKQSDLIRQINQTIQQSYMDPCLSLNQIADELNMSPIYVSRLYKQQTLTTIVDVIMEVRMKEVCRLLVESDLSVSDIAEVTGFTSSSYLHRMFKRNFSLTPIEFRRTKNSS
>NZ_LR698998.1|WP_094903677.1|5786656_5787532_-|sugar-ABC-transporter-permease
MFLMLLPTLIFFLVNSYFPMVGIYYAFTQFDFNSSMFNSKFVGLQNFEFLWRSGTLVKLTMNTIGYNIAFIVLGNVLAIVCAILLSELNGKWFKKISQSVMFLPYFVSFVILSVIVYNLFNYDSGFLNTMLTQFGLDPVDVYSKPWAWIFLIIIFYLWKNLGYSMVIYLAAITGISDEYYEAAKIDGANIFQRIWYITVPMLKSTFVVLLLFALGSIMKGQFDLFYQLIGNNGLLYNTTDILDTYVYRSLKVTFDVGMATAAGVYQSLFGFVLIMTVNYIIRKINDDYALF
>NZ_LR698998.1|WP_111505519.1|5785751_5786645_-|carbohydrate-ABC-transporter-permease
MKIQKDKYTRTLHWIAYVVIIGLSLACLLPFLLIISASLTSNESIIRDGYHLIPAQFSLEGYKTVFIFPDEVLRAYAVTVSTTAIGTVMGLFFMTMAGYVLARKDFKYRNSFSFYIYFTTLFGGGLVPWYIMITKYLGLLDSYAVLVLPGLMTPFLIILMKNFIKSAVPEELFDSGKIDGAGDFRIYWQIVLKLSMPGIATVGLFLALYYWNDWFTSSLFINDTHKYQLQFYLYNVINSAQFIAQMGAGTGVSLATEVPAESTKMAMAIVVTGPILFLYPFVQRYFVKGLTIGAVKG
>NZ_LR698998.1|WP_111505517.1|5784072_5785683_-|extracellular-solute-binding-protein
MQMNKQRGKRMSILLTSVLGLTLLAGCGGNSNSANGDNAAVKESNSGGNTAQSTNAGTEEKTGLDTSKKVELQFYMLGDAPKDLSSIEAEINKMAEEDLNATVKFNYTTWTDWDQKYKLLLSSGQSIDLIFTADWTQYQAYAKKGAFLAIDDLLPKAAPELQKFVPQEMWDAVKIDGKIYTVPATYKEYVTNGFVWREDLRKKYNLPQPTDLASYEAYMEGIKKNEPQMSPASFNSDVRGNIHDGYSTLTSQVGSPLPYGIGIKYDDPSKAYLYWGSEEHKEELLTMRRWQENGLISKNVLNLKDTIQAPIIAGKAASIFGDNPTRFNDTLMKVKAAHPDWDLGYYPYGNTIGYATPVHPIHNGFAIPKSSKNPERALAFYEKMVMDKRYNQLTQYGVEGKNYKIDANGYYELIGDASTNGFTREGMNGWAWRNPEFMLFDKSYDGVKEIFAELDKIQKPDIFTGFAEDYTSYQAEKAALEQVEKQYLYPLQAGLVEDVDAGLATFMEKAKQAGLEKIQTEYIKQWDAYVQEKGLK
>NZ_LR698998.1|WP_076130474.1|5799509_5800319_-|alpha/beta-hydrolase
MPIAKLNGTSLYYEINGTGTPVVFIHGHGLTHSMFKPQLEYFSDKYKVILCDLRGNGKSGKLLEAPHEIIETQCLDLIMLLNDLGIREAVFVGIAYGGLVVQHIAKQYPERVKAIVVADSFCRTHGSTIVGKIQTMAAYCSLLMYYLPSELVLPSIRMMYRERWSLAYNEIRRGLLDKRPRELYRQRLATSHVDYTRCLKAFKRPALCIVGDFNEFGVNCMKEMVSQLPQAQLAIIPNALDPSNLCQPEQFNAILQRFLEKQQGSQQIS
>NZ_LR698998.1|WP_169744809.1|5801106_5801280_-|hypothetical-protein
MEIPLEADEVLSRIKKLQSDGSSISKKQVKQSDPELMRSALFFFPSWEHALKNADLL
>NZ_LR698998.1|WP_076134142.1|5801364_5802165_-|Nif3-like-dinuclear-metal-center-hexameric-protein
MIVNLTIRAILEDLMGTVEQVEGTVDILNPGEPETEVTGIITAFSATQNIVEQAIALGANLLITHEGVFYSHHAASEWLEGDPVYHAKKSLIGHSPIAIFRYHDYWHRQEPDGIMIGLLRELDWSDYVEEQQAAATILTIPAMTVMEAAQYIKSKLGISYVRAAGDLSLSCKRVGILVGYRGGGTMAIPLFNDHNLDLIIAGEGPEWETPEYVRDAGHQGRSKALIMLGHAESEAPGMKYLAEILADKYPMLPTRFIAEQPIYQMV
>NZ_LR698998.1|WP_111505529.1|5802183_5804238_-|alpha-glucuronidase
MTNTAYEAWLNYGQLKSGSLYNQYINWCGELVVTEDNETIQAAAAEFIQGMTSMLGKAPLLTAQPEGPCIVIGTFQGGNPLIGRVFAGERTDSLGAEGFLIRTNATEQCVAIGASTPVGILYGVFHLLRLIGTESEIDALNLSMSPVNGLRMINHWDNFDGSIERGYAGRSFFYESNQFLNDTKRLRDYARLMSSVGINAISINNVNVHELESLFITEQYLPDIALIAGIFRVYGIKLFLSANFASPIQIGALETADPLDPAVRQWWKDKADEVYRAIPDFGGFVVKADSENRPGPFTYGRDHADGANMLGEALEPFGGIVIWRCFVYNCKQDWRDRKTDRARAAYDHFKPLDGRFNDNVVLQIKNGPMDFQVREPVSPLFGALEHTNHLMEFQIAQEYTGQQRHLCYLVPQWKEVLDFNTYAKGQTTLVKHIVDGSVWGNKYNGVAAVTNVGDDMNWTGHGLAQANLYGYGRLIWNPELTAKEIAEEWIRLTFGTDKGLVAAIRGMLMDSWRIYESYTAPLGVGWMVNPDHHYGPNVDGYEYAKWGTYHYADHKGIGVDRSVKSGTGYSGQYMGLNASNYENLASCPEELLLFFHHVPYTHVLQSGQTIIQHIYDTHFEGAEQAAQLLATWESLEGSMDSGLYIQVKHRLEEQAEHAQEWRDRINTYFYRKSGIEDFKGRKIY
>NZ_LR698998.1|WP_076206956.1|5804320_5805364_-|endo-1,4-beta-xylanase
MRLSGGNLLRQASDYTEPALKTIFAEDFKIGAAVNPLTIQSQEHLLAYHFNSITAENEMKFESLHPLEDIYNFKLADQLVAFARKHHMAMRGHTLVWHNQTTDWLFEDKKGGPVSKETLLARLKSHIQTVVGRYKEDIYAWDVVNEVIADEGEELLRQSKWLDIVGPEFIGKAFEFAHEADPKALLFYNDYNESNPLKRDKIYKMVKSLLEQGVPIHGVGLQAHWNLYDPSLDDIRAAIDKYASLGLQLQLTELDVSMFRFDDKRIDLKVAPAELLELQAERYEAMFALLKEYRDVISSVTFWGAADDYTWLDGFPVRGRKNWPFLFDEQHNPKPAYHQLLNAVTKS
>NZ_LR698998.1|WP_111505531.1|5805384_5806917_-|glycoside-hydrolase-family-43-protein
MTPSSITYTNPILPGFYPDPSITRAGDDYYLVCTSFEYFPGVPIFHSQDLIHWTQIGHVLNRVSQLDTRKSKSSGGIFAPTIRYHEGTFYMITTEVHGKGNFYVMATDPAGPWSDPISIPYGGIDPSLMFDEDGKVYVTTQQGADYDSHAIQYEIDIATGAALTEPVVIWTGDGGPWTEGPHLYKINGMYYIMTASGGTAKEHREIIGRSSSPYGPFERLPYPILTHSGTDNPIQYLGHADLIEDRNGDWWAVFLGVRLVDAKFTVLGRETFLAPVSWTEDGWPMIDNNDDTVGLEMKVSRVPGQSPKPETSGRYNFDDQVLPLGLAFLRNPAEGSWSLNERQGWLSLRGQSSGLSEVGQVAFVGRRQQHTSAEWSTLLEMPSSIADVEAGLCARLDENAHYEIGLVQKNGQKVITAHVTMDGVTHTAAEVSTTAERIYLKVKAELTEYSLFYSLDGQEWNMLSTAAAYPLSPQAVKGNGFTGVLIGLYATGHGKVAEVPAYFDWFDYQS
>NZ_LR698998.1|WP_111506407.1|5806964_5807867_-|carbohydrate-ABC-transporter-permease
MRNLRFEPVMFGTFNTIFMVCLVIVTLYPFLNTIAVSFNAGNDTIRGGIYLWPREWTIQNYKAVFASGTIIPAFWISVARTVISTILNLFLTTMLAYTLSRKEYVFRKQITFIFVLTMYFNAGLIPNYFLIKDLHLINTFWVYVIPTMISAFNMIVIRTYIGGLHESLMESARIDGAGEFKIFMKVVFPLCKPVLATIALFVAVGAWNSWFDAFIYTSSRQHLSTLQYELMKLISSSMNANSNASVANGAGVTAESAGSMVTPKSIRAAVTIVASVPILLVYPFMQKYFVVGMNVGSVKE
>NZ_LR698998.1|WP_076098803.1|5807926_5808895_-|sugar-ABC-transporter-permease
MDEILTGKKVNRHPKRKKKQPITMTLIKNQKQLIWMSVPLLLYIILFAYVPVWGWTMAFQDYKPAKAFGEQTWVGLKHFKFLFTDDTFLRVLRNTLAMGLINFFLGFITAITLALLLNEIKNVFWKRTVQTISYLPHFLSWIIVTGIVGVSLSVNDGIINIVLMKLHLIDSPILWLSEGKYFWGIVGASTVWKEVGWSTIIYLAAIASIDPALYEAAEIDGANRYKKMFNVTLPGIRPTIVILMIMSIGHVLDVGFEVPYLLGNGLTVDWSDTIDIFVLKYGIGQGNYSLATAGGIFKTVVSVTLLLLANWTSKRLGEERLL
>NZ_LR698998.1|WP_076098804.1|5808979_5810686_-|sugar-ABC-transporter-substrate-binding-protein
MGGKLISKWKLSLIAVLSLSFTLAGCGGNNSNNTTAKGEDKPAETATSTAAGTDSDKIEPFEISIFLGEAGQQPTPDNKIYKMIKEKTGASFNFEFLAGDLKQKLGVMIAGSDYPDLMSSNTQLTAAGAFIPLEDLIEEHAPNLKAHYAAYWNMMKDPNDGHIYTLPNYGAYNGDVNSTYYSGPAFWIQKAVLKDAGYPVVKTLDEYFDLIVKYKEKNPTIDGQPTVGFEIHNKDWRNWGLFNAPQHLIGHPNDGGVVVNDNVAEVFADKDYAKQYYKKLNDMNALGIIDKEAFTMDYDQYLAKLSSGAVLGMFDQHWNFGKAEDSLKTQEKDMRTYVGLPLVYDTNTKDYYLDRPALNLNNGFGITVNAKDPVRILKLMDTLIQEDWQRTLTWGIEGEDYIVENGRFMRTQEQRDNAVDATWKLSNKAEAWYATAPKMQGYFADGNSTDAAAQPEEYKAGLEAFDKEVLDAYGFNSYVDFFSKPGPNPVAYPAWSIDLVENSPAKIADTKMGEVKTKFLPKAILASPSDFDKVWAEFVKELNKADIKAYEDRINEQLKWRFDTWSVK
>NZ_LR698998.1|WP_111505533.1|5810801_5812337_-|response-regulator
MKYKVLLIDDEPSALEAMQLWINWQELGFEVCGTSSNGKEGLELMKQLEPDLVITDVNMPLMNGLEMVAAWQQAEIKEIKFAILSGYSEFEYAKTAIHYGINHYLMKPVFPEEAAEELLEIYQELEQEAQKRSLNQIASAEEAVSLLKGMLHEKAEQSNQEILNRLSEGKSHWNICLIQTEPVLYTEIREQASALLTDKDSMFLMDLESHCFGIVYGYNSLSTEGAVIDQIATSLLNEHPKQALCIAAGAGVSSLLQIGDSYRTAKEALMYYFYYPENAAVLTYQEIKDSPFSYHYDQIQLMDDLIRPINTLDSADFSQAVNSAARSFREQRIAPEVVKKIVIHMMYKIIEFTSEASEVHESSLSNQIRIPAMLDSMITLTDLMRNLLFCGEVSIDILLKEQNLRSQGIVQEINNYIEEHFRECLTIKRLSEVFFLHPVYLGQLLIKKNGINFNEQLHNLRIKEAVHLLQQNKLKNSEIAEKVGYGNYSQFLKQFEKKLHMSPNEFKNTNT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_18

5982310-5982400

Orphan

Consensus_repeat	Method
ACGGCGTTTAAATGCAAAGCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_18

>merge|NZ_LR698998|18|5982310-5982400|CRISPRCasFinder
ACGGCGTTTAAATGCAAAGCATGAGTGAAGATTAGTTTAAGCGCTGAGGTTGAGCACAGGTAGGAGCACGGCGTTTAAATACAAAGCATGA

>NZ_LR698998|18|18|5982310-5982400|CRISPRCasFinder
ACGGCGTTTAAATGCAAAGCATGA	GTGAAGATTAGTTTAAGCGCTGAGGTTGAGCACAGGTAGGAGC
ACGGCGTTTAAATACAAAGCATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076137019.1\|5990918_5991401_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273242
NZ_LR698998.1\|WP_076137017.1\|5988932_5989706_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_094903440.1\|5987993_5988815_-\|prohibitin-family-protein	unknown	unknown	gnl\|CDD\|259799
NZ_LR698998.1\|WP_076137011.1\|5982613_5983684_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236446
NZ_LR698998.1\|WP_036680251.1\|5976443_5976644_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505613.1\|5989898_5990897_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_LR698998.1\|WP_076137001.1\|5969762_5971550_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LR698998.1\|WP_076137005.1\|5975090_5976251_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_LR698998.1\|WP_111505605.1\|5968215_5969766_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|227095
NZ_LR698998.1\|WP_076206674.1\|5980498_5981638_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|341474
NZ_LR698998.1\|WP_111505611.1\|5978209_5980174_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319849
NZ_LR698998.1\|WP_076206678.1\|5973505_5974822_-\|xylose-isomerase	unknown	unknown	gnl\|CDD\|235487
NZ_LR698998.1\|WP_111505607.1\|5971758_5973255_-\|xylulokinase	unknown	unknown	gnl\|CDD\|198374
NZ_LR698998.1\|WP_111505609.1\|5977084_5978026_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_LR698998.1\|WP_076137007.1\|5976782_5977016_-\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_LR698998.1\|WP_076099934.1\|5986473_5986815_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111505615.1\|5991619_5993065_-\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_LR698998.1\|WP_036680262.1\|5985498_5986176_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_LR698998.1\|WP_094903439.1\|5986912_5987818_+\|3-oxoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|238426
NZ_LR698998.1\|WP_036680260.1\|5983894_5985187_-\|homocysteine-synthase	unknown	unknown	gnl\|CDD\|236201

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076137019.1\|5990918_5991401_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|273242	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein. This model represents a superfamily of probable transcriptional regulators. One member, RRF2 of Desulfovibrio vulgaris is an apparent regulatory protein experimentally (MEDLINE:97293189). The N-terminal region appears related to the DNA-binding biotin repressor region of the BirA bifunctional according to results after three rounds of PSI-BLAST with a fairly high stringency. [Unknown function, General].	1.16194e-28
NZ_LR698998.1\|WP_111505615.1\|5991619_5993065_-\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.496e-136
NZ_LR698998.1\|WP_076137011.1\|5982613_5983684_-\|hypothetical-protein	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0.00332408
NZ_LR698998.1\|WP_111505613.1\|5989898_5990897_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	8.0067e-117
NZ_LR698998.1\|WP_076137001.1\|5969762_5971550_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.55822e-57
NZ_LR698998.1\|WP_076137005.1\|5975090_5976251_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.8697e-66
NZ_LR698998.1\|WP_111505605.1\|5968215_5969766_-\|response-regulator-transcription-factor	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.5014e-82
NZ_LR698998.1\|WP_076206674.1\|5980498_5981638_-\|3-dehydroquinate-synthase	gnl\|CDD\|341474	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol condensation. The binding of substrates and ligands induces domain conformational changes. In some fungi and protozoa, this domain is fused with the other four domains in shikimate pathway and forms a penta-domain AROM protein, which catalyzes steps 2-6 in the shikimate pathway.	1.68072e-147
NZ_LR698998.1\|WP_111505611.1\|5978209_5980174_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_LR698998.1\|WP_076206678.1\|5973505_5974822_-\|xylose-isomerase	gnl\|CDD\|235487	PRK05474, PRK05474, xylose isomerase; Provisional.	0
NZ_LR698998.1\|WP_111505607.1\|5971758_5973255_-\|xylulokinase	gnl\|CDD\|198374	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. D-xylulose has been used as a source of carbon and energy by a variety of microorganisms. Some uncharacterized sequences are also included in this subgroup. The prototypical member of this CD is Escherichia coli xylulokinase (EcXK), which exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ is required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_LR698998.1\|WP_111505609.1\|5977084_5978026_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.47405e-156
NZ_LR698998.1\|WP_076137007.1\|5976782_5977016_-\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	6.22289e-22
NZ_LR698998.1\|WP_094903440.1\|5987993_5988815_-\|prohibitin-family-protein	gnl\|CDD\|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	5.97262e-69
NZ_LR698998.1\|WP_036680262.1\|5985498_5986176_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	2.05142e-119
NZ_LR698998.1\|WP_094903439.1\|5986912_5987818_+\|3-oxoacyl-ACP-synthase	gnl\|CDD\|238426	cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.	3.22118e-65
NZ_LR698998.1\|WP_036680260.1\|5983894_5985187_-\|homocysteine-synthase	gnl\|CDD\|236201	PRK08248, PRK08248, homocysteine synthase.	0

>NZ_LR698998.1|WP_076206674.1|5980498_5981638_-|3-dehydroquinate-synthase
MSTNFRVGLQKVVDHSYDIEIGEGLFGTLIEDLKRGIVENVSKFAIITDSKVEALYGQALLEQLLQNDFQAELFSFPAGEKSKTRETKAQLEDRLLSRSYGRDCCILAIGGGAVTDMAGFLAGTFGRGVPSLNYATTLLAAADASIGGKTGVNTPVATNLIGVFHQPKKVYIDLATWRTLPVRELRSGLAETIKHACIADAEFFEFLEQNMERVVSSEGNLVLDREVCEQIAFHNCEIKYSVVEKDELESNLRQILNLGHTAGRALEALSGYELLHGEAIAIGLAVQVQLAEQLGYVSADQTQRVIALLKKAGLPTEIPATITNRMLIDKMYTDKKVRKGRIRFVFQAGIGAMKSFEGGAYSTPVEEQVLSELLNKIRS
>NZ_LR698998.1|WP_111505611.1|5978209_5980174_-|cadmium-translocating-P-type-ATPase
MQATSKHLPQQTSISGSMKKPGAPKRRFDLRAMLSNSEMQAALGSGVLMLFAWVMGSWSEVFSIVLYVISYTIGGWNKAKEGVETLVKERDLDVNLLMIAAALGAATIGYWNEGAMLIFIFALSGALESYTMERSKKDISSLMALKPATAMRIEKGSMNEVAIDQLVIGDLLLVRPGDLIPADGKVYRGESAVDQASITGESVPVEKCAGSEVFAGTVNGEGPLYIEVTKSAENTLFSKIIKMVEEAETDVPNSQRFIKRLEAIYARVVVASTVALIFLPPFLLDWSWSATFYKAMVFLVVASPCALVSSIMPAMLSAISKSARKGILFKGGVHLENMARTSVVAFDKTGTLTEGTPQVTDFIAGEGYNREELLAISASIEHMSRHPLAEAIVRKAEEEYLELRGVQESKTITGWGIEGQVDGHLWKIGKSNLLDELTSSAMDSELAFWRTKRQQLAEEGKTVSIILDGEHIAGMIALQDTVRPQAEAAVRKLQELGIKVAMLTGDREATAKVIAASTGVDLVFADLLPEDKVKHIKALREEHGNVVMVGDGVNDAPALATATVGMGMGMKGSGAALEIADVVLMNDNIEEIASTISLARRSQRIVKQNMIFAATVISVLMISNFVQGIALPFGVIGHEGSTILVILNGLRLLR
>NZ_LR698998.1|WP_111505609.1|5977084_5978026_-|thioredoxin-disulfide-reductase
MYKSIIVGTGPAGLTAAIYLARANLNPLVIEGPQPGGQLTTTTEVENFPGFPDGIMGPDLMDNMRKQAERFGAEFRTGCVNSVELGERPFKLNVEGLGVLTTDTLIISTGATAKYLGIPGEQDNVGRGVSTCATCDGFFFRNKEIVVVGGGDSALEEAGFLTRFASKVTLVHRREELRASKIMQDRVRDNVKVAWSLNRTPLEVTSGDKGVSGLKVLNNETGQEEIIEASGVFVAIGHHPNTAFLGGQITTNTEGYIMTNPGTSETNIPGVFACGDVQDTRYRQAITAAGSGCMAAMDAEKYIESLEHSAVIL
>NZ_LR698998.1|WP_076137007.1|5976782_5977016_-|glutaredoxin-family-protein
MENVIVYTSTNCPHCRQVKSFLSEKGVAYEERNIEQNDDYAQQVWDMGMRAVPVTVIGEHKIVGMNITQFDKALATV
>NZ_LR698998.1|WP_036680251.1|5976443_5976644_+|hypothetical-protein
MTYVDTSDISAQMFITVLLFLLIIAPLISLGVLRFFQAKKKSGFILIGSGVAVYVLFQIITSFTQA
>NZ_LR698998.1|WP_076137005.1|5975090_5976251_+|ROK-family-transcriptional-regulator
MKVTGDQALVKKINKSIVLHTIRRNSPLSRAKVSEMTGLNKATVSNLVAELCAQELVTEVGPGQSSGGRKPLMLHFNSMAGSVIGIELRVKQLTAVLCDLSGGILFESDFSLDNHALPYVLERMKKTISDLIDKAPESPYGIVGIGVGVPGMVDENGVVLFAPNLGWEMVDLRGILEAEFAVPVTIDNEANAGAQGELNFGAAKDVRHLLYISAGSGIGSGIIIGGELYKGARGYAGETGHMTIEAQGKPCSCGSRGCWELYASEKTYDHSEFSLPAHTTQELVRYAAAGQEDALRHFSSMGEYLGIGVTNLINSFNPELIVIGGALSEAEAWLGKPLRRVVAERTLPYHKQQLEITFSKLGSRGTMIGAGFSAVMHFLGDIRVTV
>NZ_LR698998.1|WP_076206678.1|5973505_5974822_-|xylose-isomerase
MAYFETVNKISYEGSRSTNPYAFKFYNPKEVVAGKTMEEHLKFAMAYWHTLTAGGSDPFGAETAIRSWDKLSGLDKAKARAEAAFEFMDKMDLPYFCFHDVDIAPEGASLREFYSNIDTIVDILEQGMKTSGKKLLWNTANMFTNPRYMHGAGSTPNADVFAHAAAQVKKGLEVGKRLGASNYVFWGGREGYEELLNTDMGLEQDNIARLFSMAVDYAKEIGFDGQFLIEPKPKEPTKHQYDFDAATTISFLQKYNLDKHFKLNLEANHATLAGHTFEHELRVARINGMLGSLDANQGDTLLGWDTDEFPVNIYDATLTLYEVLKNDGLGKGGINFDAKVRRPSFEPEDLFLAHIAGMDTYAKGLKVAAKLIEDRVFEDFVDKRYSSFTEGVGADIVSGKATLASLAEYALNNENPRPNQSGRQEYLRATLNQYILAE
>NZ_LR698998.1|WP_111505607.1|5971758_5973255_-|xylulokinase
MKYVIGVDLGTSAVKTVLVDPQGKVAFEHSESYPLSRPQPNWSEQNPEDWVKGTLVSLRRLIEVSGIDPSQVDGLSFSGQMHGLVLVDKEGQVLRPAILWNDTRTTVQCRKIEKTLGAKLIDIARNKALEGFTLPKILWVQENEPEVLSQAHQFLLPKDYVRYRLTGDYAMDYSDAAGTLLLDVGSKEWSAEIAEAFELPLSLCPRLVESFEQTGTLLPDIAEASGLLSSTKVFAGGADNACGALGAGVLGEGRTMCSIGTSGVVLSYESNKDLNLEGKVHFFNHGEKDAYYIMGVTLAAGHSLTWFKETFAADKSFDELLSGVSSIPAGSGGLLFTPYIVGERTPHPDANIRGSFIGMDSGHTLTHFTRAVLEGITFSLRESIEIVRESGKEITEIIAIGGGAKNEAWLQMQADIFNASIVKLESEQGPAMGAAMLAAYGSGWFTSLAECAEAFIRPADVYKPDPKQTAIYDGLFNLYQEVYGQTRELNNKLAAYRQ
>NZ_LR698998.1|WP_076137001.1|5969762_5971550_-|sensor-histidine-kinase
MFQWFVKVLNDIKIRNKLLLAFLLTTLLPVLLVGGYLTIEMRTMAFENALEQASINVDRVKKRTEEVIGVSQDIAYRLSNDARLKKLAIRQYVSTYDVVEAYRDYTDMREYLRLYKDISNIRLYTDNATLLNNWELINPSSAIKESQWYQRAQRYDSLVGWEYIEDERDQRNYLSLVRKIELEGSSKIGVLVINVNSHQLTSILSQESFDTMIVDDQDNIIAANRSDRTGKKLADVSFDTKLLGQGSGSYEAEVDGEASKIVIEELKPQASRNALRIISVFSIDSIVKEPNRVIKLSITVIAVSVLLAFLIIYSFSSLFSRRLLQLSRHINRVSTGDFDTSLKIDGKDEIALLARQFNSMVRSINDLMYEVQESNDQNSLLEQKQNDIRFKMLASQINPHFLFNALESIRMEAHMKGQVEIARVVRLLGKMMRSNLEVGRSKILLSQELEVVRCYLDIQQFRYEDRLKYQFIVDPAVESLYIPPLIVQPLVENAVIHGLDNTMDGAMVTVNIKREQNHAVFTITDNGAGITPDKLEQIRYTLEIRDEQEEARIGLRNVHDRLKLSYGVEYGLNIESRMNEGTSITFRIPMEDINL
>NZ_LR698998.1|WP_111505605.1|5968215_5969766_-|response-regulator-transcription-factor
MIKVLIVDDEPKLREGLRALIPWEELGYTVVATAANGLQAQEKYHIFYPELIVVDIRMPGMDGLELIGELREEGSTSHVLILSGHADFEYAKRAISYRIDGYLLKPVDEEELINYLEELRVTIAQEDRFSRWNEEEPARNRESLLRALLQPSTAEEGENDPAKQAAALGLKSGRVEVILLELLAPAGGSEEGERAVKAAVEQYFGSSEERMFFTMPPYIGFLLQEPLPGKQEQERLMEELSSLICREGYDFSAATGGPVAEPEEAAQSFQVARELLRRAFFYRKGILISADLSGMLFPGVEEAYAEEGQDAESRLMLAVETGSRAAIEPLVDTICAELLAAGSEEQQIKDTFVRILSTVLARLEPVYPEIRSNAAKHSPPIGELYHSHYLADLQEQAVNFMAEIADQMSSGSKGNEIKKITELINRRYNENLKLETLSELFNYNSAYLGKMFKNTTGEYFNTYVDKVRIEKAKQFLAQGMKVYEVAEKVGYMNPDYFNAKFRKYVGLSPSSFRKNI
>NZ_LR698998.1|WP_076137011.1|5982613_5983684_-|hypothetical-protein
MKGERQQDGLRSSEERPFKFMYKAGDRTVGMEMSQAGSVASAAAEFIAGVEQRDVIEPLKRSYFKRPGEPSTFLVLREGREERLAGREGTRTVQAGPCLIRSEEWLLEPELFCLYENWLSSEDELQTARILQRISYRLRAAVAELLESPDGEWAAVTLLHPESLAVAQPAKLAALQDAQLEALFAAVAESQRQGGDCRLDLLVAYTASAAEFAAKREFIEDVADQTLGHAYAAACRIGALIAPDVEPAAAAEIARIADFLVLDGAAGEHAPEETAAEGFALAAGEIFAAVTSVKPAAVVLAAGTPAASALADLYQIGLSGIFCSAGQRTEALLRAACLIWIARQRETLDTAAGGRQ
>NZ_LR698998.1|WP_036680260.1|5983894_5985187_-|homocysteine-synthase
MSEDRKLSFETLAVHAGQEIDPTTFSRAVPLYQTTSYGFRDADHAADLFALKEFGNIYTRLMNPTTDVFEQRVAALEGGAGALATASGAAAISFSILNIAGAGDEIVSAASLYGGTYNLFSTTLPKLGIKVHFVDSDNPENFRAAITDKTKALYAETIGNPQGNVLDIAAVAAIAHEHGIPLIVDNTFPSPYLLRPIEHGADIVVHSATKFIGGHGTSIGGIIVDGGKFDWKASGKFPGLTEPDPSYHGVVYTEAVGPIAYIIKARVQLLRDLGAAISPFNSWMLLQGLETLHLRMERHSQNALKVAQYLEAHSDVEWVSYSGLPTHPSHELAQKYLPKGQGAILTFGIKGGSAAGRKLIENVKLFSHLANVGDSKSLIIHPASTTHAQLSDEEQITAGVTPELLRLSIGTESIDDIIYDLEQAIAASQQ
>NZ_LR698998.1|WP_036680262.1|5985498_5986176_-|deoxyribose-phosphate-aldolase
MSEITLSGIIDHTLLKADARKEDIIKLAEEAKTYKFASVCVNPAWVATAHEVLKDTPEVKVCTVIGFPLGSSTTESKAFETTDAIAKGAGEVDMVINIGALKDGNDELVKRDIAAVVDAARGKALTKVIIEACLLTEEEKVRACKLSVEAGADYVKTSTGFSTGGATKEDIALMRATVGPNIGVKASGGVRSAEDAHVMVQAGASRIGTSGGVAIAKGETSQSNY
>NZ_LR698998.1|WP_076099934.1|5986473_5986815_+|hypothetical-protein
MGNFNFATNAADQKLNVQVEGTMSPEDAGRFINEYNQIISAFDPKQYEIILDCKTLNVSSKDTLPMLEQCYILYKQSGFKKVTFIIAKSPVLKMQLSRVARATKLENYEIIEA
>NZ_LR698998.1|WP_094903439.1|5986912_5987818_+|3-oxoacyl-ACP-synthase
MGKDIKRFLEVMGRDRRYIVKEQGENALTMGLKAAQKVLSEANLQGEDMDMIMFASQTPEYTYPTNALLLHRMLQGKHRTITQDSNANCAGMVSAVEQTSRYMQANPSIRYALVVGSDYSSVNCNTDDEITYPNFGDAAAAVILERSNEHAGFIDSLYYTDSEGSENIMFPACGLSNIYQEGMTPEQIRIRWTPFDGTVCVDAAIADMKELLSRNGLTTDDISAFCLSQFSLKNIELIQIGLGLTAEKFIYVGDEFGYTATSSPFIAFQRGVEDGRIKRGDYVFFWSVGAGWQIPTMLYQY
>NZ_LR698998.1|WP_094903440.1|5987993_5988815_-|prohibitin-family-protein
MNPKLKQLRPGKIVSGIAAVLIVLLIGANSFVSVEYGHVGLYKTFGKLNDNTLSPGIHFKIPFIQTVIQVNTQVTKAETDTSASSKDLQPVSTHVAVNYSVNKASAFNLMNNIGGNFDSVIINPAIQEIVKEVTAKYPAEDLITRRDVVSSEISEHLTARLAKYDLIVNDINIVNFKFSEAFNQSIEAKQVAQQQALKAENDLRRIEIEAKQKIAQAQAEAESLRLKKQEVTPELVQLKQIEVQEKALEKWNGVLPSVTGGATPFVDVQSLTK
>NZ_LR698998.1|WP_076137017.1|5988932_5989706_-|hypothetical-protein
MFPLHKSVTLTALFLMNLLAGCQHQVDPSSLQSANDYHTSRPKPTDTAANLIKLEWKLVDTIPVVSQLIAPPTGATLITEKKLEDFGGVKVSVYTMPSDEDYVYARTSTSKGQYSLGAIGTYNYRQPEDIKVEVVRLFSEKVLKITGGLGANNSLSNYYLIDESGNPSGLLQIDTGHSRELDVDQDGSFEGVAAHGNPMSAYIYRWNVDHAEITFVNDALKADSVVLTDEGIYEASNIGDKQSKKFRLTVEGLIPER
>NZ_LR698998.1|WP_111505613.1|5989898_5990897_-|LLM-class-flavin-dependent-oxidoreductase
MRLSILDQAPVTSGNTAEGALNKAEELAILADELGYSRMWMAEHHGGNTFASSAPEVTAARLAAKTNRIRIGTGGVMMMHYSPLKLAEVFKTLSAFSPGRIDFGVGRAPGGDTSAMYALSEGRELMLHNMYDKLGITMQLLSDQIPEDELYAKNLAAPTKVALPEVWLLGSSGNSARKAAQMGVGYSFAQFFNGAMSNEILDHYRNNYQPSIFMDKPEISVSYMVTTAETKEEAEYEALPQDIFRLMMSKGRITQVLTPEEAQNISLSEIDRMSIKEGRKIHLVGAVKDIAVRLQEEQAQYGFQEVMICSIPHSQEKRLEVYRLLARELLGS
>NZ_LR698998.1|WP_076137019.1|5990918_5991401_-|Rrf2-family-transcriptional-regulator
MHMKTGVEQSVYALVLLNMLPDKAVLSGEAISQQLGASATYFQKLLRKLVTADIITSVPGIKGGFKLKKSPEDIRVYDVYLAVEGQQSLYSSNGILVDMLDLEKEDSCCLLSNLMEEAESSWKAVLKRETIASLSEEMRGERFKDKIAALEEWVSNKMVI
>NZ_LR698998.1|WP_111505615.1|5991619_5993065_-|SulP-family-inorganic-anion-transporter
MLKQLTLNNGWFSNTRTDILSGMTVAVALIPEAIAFSILAGVSPMVGLYASFCIAIVTALAGGRPGMISAATGAMALLVGSLVLEHGIEYLFAATVLAGVFQILMGMLKLGRFITFLSQPVMTGFVNALAILIFMAQLTHFKGQGWVMYGLVALTLLIIYTVPRFTKAIPSALVAIVIVSILSIALHLDVRTVGDMGNITATLPLFHLPQIPFTLDTLLIILPYSLSLAVVGLLESLMTATLIDDITGTGSDKNREAKGQGLANVVTGFFGGMAGCAMIGQSMVNMKSGGRTRLSTFVSGIFLLFLIIVLGDVVKQIPMGALVGVMIMVCISTFEWGSLKTLTRVPLSDALVMIVTVVTVVVTDNLSIGVLFGVLLSALTFAWKIASIRLTVQEATSSKTYAVSGQLFFGTTSHFIHEFAYDSDPDHIIIDFSHSHVWDQSAVHAIAKTMSKYAEHGKKVTITGLNDQSSQLVQRVGLSLQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_19

6116206-6116292

Orphan

Consensus_repeat	Method
AAGTTTTGTGAGCGTTGCTACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR698998_19

>merge|NZ_LR698998|19|6116206-6116292|CRISPRCasFinder
AAGTTTTGTGAGCGTTGCTACACTTGTATTACTTCGTACAAAACTCGCTTCGGAAGCATACGCTTAGTTTTGTGAGCGTTGCTACAC

>NZ_LR698998|19|19|6116206-6116292|CRISPRCasFinder
AAGTTTTGTGAGCGTTGCTACAC	TTGTATTACTTCGTACAAAACTCGCTTCGGAAGCATACGCT
TAGTTTTGTGAGCGTTGCTACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076138447.1\|6113794_6114406_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|224219
NZ_LR698998.1\|WP_076138443.1\|6121126_6121819_-\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_LR698998.1\|WP_025706574.1\|6122047_6122440_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_LR698998.1\|WP_076129758.1\|6105528_6105960_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|379262
NZ_LR698998.1\|WP_052097348.1\|6115368_6116190_-\|polyphosphate-kinase	unknown	unknown	gnl\|CDD\|274737
NZ_LR698998.1\|WP_111505699.1\|6102298_6103621_-\|phage-tail-sheath-subtilisin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377435
NZ_LR698998.1\|WP_076138386.1\|6104742_6105240_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|273725
NZ_LR698998.1\|WP_111505705.1\|6123127_6123910_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_LR698998.1\|WP_111505701.1\|6103620_6103800_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_038573445.1\|6119100_6119841_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
NZ_LR698998.1\|WP_019908254.1\|6124227_6124593_-\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_LR698998.1\|WP_076138445.1\|6117900_6119010_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_LR698998.1\|WP_076307211.1\|6103796_6104210_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_076138385.1\|6105988_6106402_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NZ_LR698998.1\|WP_036680629.1\|6114514_6115318_+\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	unknown	unknown	gnl\|CDD\|200573
NZ_LR698998.1\|WP_036680589.1\|6122460_6122898_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_LR698998.1\|WP_076138446.1\|6117154_6117841_+\|spore-gernimation-protein	unknown	unknown	gnl\|CDD\|380050
NZ_LR698998.1\|WP_036680631.1\|6113310_6113541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_111506431.1\|6116432_6117023_-\|KinB-signaling-pathway-activation-protein	unknown	unknown	gnl\|CDD\|372908
NZ_LR698998.1\|WP_111505703.1\|6119919_6121089_-\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235227

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076138447.1\|6113794_6114406_-\|stage-II-sporulation-protein-M	gnl\|CDD\|224219	COG1300, SpoIIM, Uncharacterized membrane protein [Function unknown].	7.22111e-22
NZ_LR698998.1\|WP_025706574.1\|6122047_6122440_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.0693e-87
NZ_LR698998.1\|WP_076129758.1\|6105528_6105960_+\|transcriptional-regulator	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	3.45163e-17
NZ_LR698998.1\|WP_052097348.1\|6115368_6116190_-\|polyphosphate-kinase	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	3.83371e-135
NZ_LR698998.1\|WP_111505699.1\|6102298_6103621_-\|phage-tail-sheath-subtilisin-like-domain-containing-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	3.13367e-31
NZ_LR698998.1\|WP_076138386.1\|6104742_6105240_-\|transcriptional-regulator	gnl\|CDD\|273725	TIGR01637, Putative_autolysin_regulatory_protein_ArpU, phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions].	2.50627e-14
NZ_LR698998.1\|WP_111505705.1\|6123127_6123910_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	7.15045e-112
NZ_LR698998.1\|WP_111506431.1\|6116432_6117023_-\|KinB-signaling-pathway-activation-protein	gnl\|CDD\|372908	pfam14089, KbaA, KinB-signalling pathway activation in sporulation. This family of small proteins is found in the membrane and is necessary for kinase KinB signalling during sporulation. There is a conserved GFF sequence motif. The initiation of sporulation in Bacillus subtilis is dependent on the phosphorylation of the Spo0A transcription factor mediated by the phospho-relay and by two major kinases, KinA and KinB.	2.88379e-51
NZ_LR698998.1\|WP_019908254.1\|6124227_6124593_-\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	4.00554e-65
NZ_LR698998.1\|WP_076138445.1\|6117900_6119010_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	9.90221e-123
NZ_LR698998.1\|WP_076138385.1\|6105988_6106402_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	7.8708e-16
NZ_LR698998.1\|WP_036680629.1\|6114514_6115318_+\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	gnl\|CDD\|200573	cd10949, CE4_BsPdaB_like, Putative catalytic NodB homology domain of Bacillus subtilis putative polysaccharide deacetylase PdaB, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by the putative polysaccharide deacetylase PdaB encoded by the pdaB gene on sporulation of Bacillus subtilis. Although its biochemical properties remain to be determined, the PdaB (YbaN) protein is essential for maintaining spores after the late stage of sporulation and is highly conserved in spore-forming bacteria. The glycans of the spore cortex may be candidate PdaB substrates. Based on sequence similarity, the family members are classified as carbohydrate esterase 4 (CE4) superfamily members. However, the classical His-His-Asp zinc-binding motif of CE4 esterases is missing in this family.	2.98454e-100
NZ_LR698998.1\|WP_036680589.1\|6122460_6122898_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.61241e-94
NZ_LR698998.1\|WP_076138446.1\|6117154_6117841_+\|spore-gernimation-protein	gnl\|CDD\|380050	pfam17898, GerD, Spore germination GerD central core domain. This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination.	6.69469e-41
NZ_LR698998.1\|WP_076138443.1\|6121126_6121819_-\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.37564e-111
NZ_LR698998.1\|WP_038573445.1\|6119100_6119841_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	1.86348e-101
NZ_LR698998.1\|WP_111505703.1\|6119919_6121089_-\|sulfate-adenylyltransferase	gnl\|CDD\|235227	PRK04149, sat, sulfate adenylyltransferase; Reviewed.	0

>NZ_LR698998.1|WP_052097348.1|6115368_6116190_-|polyphosphate-kinase
MDIKRYMIKDTNEIQLNKLDPDDTGNFKSKKEAEAKTEQLKERLAELQDILFAQKKHSLLVILQGMDSSGKDGTVKHIFSGINPQGFIVTSFKKPSLEEEAHDFLWRVHQKTPPKGYISAFNRSHYEDVLVPRVHGGLKKDDLKRRFRYIRQFEEMLVEEGTTIIKLFLHISKEKQLKKIKERLEDPKKHWKFDASDLQEREFWDDYQEAYVDVFKESSIDKAPWYWIPANHQWYRNYLALSIVVKTLESLDLSYPKLNTPTPDISELISPRH
>NZ_LR698998.1|WP_036680629.1|6114514_6115318_+|polysaccharide-deacetylase-family-sporulation-protein-PdaB
MNSFYVFSGKKIKRFIYIFAAVLLAAGVVYVERGNITVFSEAGPSAIYSVPTEKKLIALTFDISWGEKRPEPILKVLEDKKVDKATFFLSSPWSKTHPDIVTSIKNAGFEIGSHGHKHVNYSTLSNEEIRTQITTAHTVLTELTGKEPNLIRMPNGDFDKRVLQVANDLGYKVIQWDTDSLDWKNIGVDNIVKRVTTKAHPGDIVLLHASDSCKQTHEALPQIIDELRRQGYEFVTVSELISQSNAEGKEVRDSASLNSALEDAAGL
>NZ_LR698998.1|WP_076138447.1|6113794_6114406_-|stage-II-sporulation-protein-M
MLSFFTFVKDIKSIRKALLLSCLLFVIGAVVGWVATSSLEKLLVQQLEGLSEISGNLRDTANPQWNFFVFIFLNNAIKGVVIIFLGALFGILPAIFLFINGAVIGYLIHLSALQGQDLFDLIVKGLLPHGIIEIPAIIIACAFGLHFGGKVISSLFRSTDRKEERSADWSAFMRQTLTASIWTVILLFVAAIIESTITFSLLS
>NZ_LR698998.1|WP_036680631.1|6113310_6113541_-|hypothetical-protein
MLGMLFNEKECKELDYVLRKELDEMLLDLSDQRLDQNIRHAIANRYKTVFRMYARFAPQKELSKYAWGGRSSQYKH
>NZ_LR698998.1|WP_076138385.1|6105988_6106402_+|ImmA/IrrE-family-metallo-endopeptidase
MDELINSLIKKYKTNCPFELAAALGIQVRFMNLGTGTKGLYYRKLRRRFIVIHNELPVEWQRFVCAHELGHDRLHKGINRFFLEESSYFSPGKLERQANVFAVKLLSSGRSPEQEESWRNYYLRIGIPPEVRFFLEE
>NZ_LR698998.1|WP_076129758.1|6105528_6105960_+|transcriptional-regulator
MKQEFGDYMKHLRETKGLTINQLAVAAGISGSQISRIENGLRGVPKPTTLRKIAEATGVPYEELMDQAGYLQDQTLSSDEAVPDWATSKDKRDFRKMLEDDGELMFDGIPLDKEDKQRIKDVLTGLFWEAKQMNKRKKSKDTK
>NZ_LR698998.1|WP_076138386.1|6104742_6105240_-|transcriptional-regulator
MNISILPELDRRRTQVAIESMLEKYRIFKTVTFEAKEASTTYSYTERFHGPTNTVTDQTAAIASYNVDIPAARRAYCSAIDSVVERLDTREQQLVRERYMRRDEMYDYTIYNHVFDPPVSKDTYVKIRSKAFYKMALALTDLGLLSLQTLVITAPRVKKEKMSIT
>NZ_LR698998.1|WP_076307211.1|6103796_6104210_-|hypothetical-protein
MSVQQLREHITSTLERYFPDVPVYVEGEKPQTAYFHPGLISATLDRQREGRYLAVYRFGIRYEQGNLLEAERMADKLSEAMAGMEQEGGAFRVVRQAWEAGTEGHGPLFTVDYMLYLQNDKPDSIKMGQMIGGERLK
>NZ_LR698998.1|WP_111505701.1|6103620_6103800_-|hypothetical-protein
MSTKGSNGNGFSKEQIVNSSLFTLREKDILNVILQDGKNYTLEEAKQSMGLFKNKEVMN
>NZ_LR698998.1|WP_111505699.1|6102298_6103621_-|phage-tail-sheath-subtilisin-like-domain-containing-protein
MAGGTWTTQNKVRPGVYVNVASNQGAIGKMGERGITALALALSWGEPGVIMKITPQDDVNKLLGVDLEHPTLLPVREALKRAGTLLLYRLNEGVKAAVTNNGLQVTAKYGGVRGNALSIVIEKNIENAALFDVKTLLNGTELNKQTVGTAEELVANDYVQFQKNGAEGLKLIAGMPLTGGANGTVTNGAHSDFLSALEVQEFQTVGLVSQDSALKALYSSFVRRLRDTEGKKIQAVLSDYAAAGHEGVISVNNGVVLSDGTTIDNVNAVAWVAGATAAAAVNESLTYQGYDDSVDADVRLSHSETTAALLKGELIFTYSGGRAVVEQDINTFTAFSPDKGKAFSKNRVLRVLDGIANDMKRIFENYYIGKVANNEDGRALFWSQCATYMNDLQDMGAIEGFNAQTDVVVVAGADSDSIVLDVAVKPVDSVEKVYMKVKVV
>NZ_LR698998.1|WP_111506431.1|6116432_6117023_-|KinB-signaling-pathway-activation-protein
MSIKKWFYLFWTTLLIGAGGAVITGLALQFVNGRIDFKSVADFFLYPLILFGYGMLVSVYAQLGFFAYLILNYMGNGVFPPKIWKYIQLVLSVLALLELIFLRTVVNGERSVLSDLILGIFILLAAIIVSYFKVKSTNISAWIPTLFFMTAISIVEIIGVLRIGVDSATVFIVVPLIACNAFQILMLHRILKPAAG
>NZ_LR698998.1|WP_076138446.1|6117154_6117841_+|spore-gernimation-protein
MKWRFIGSVGLALSFVMALTACGSEQSSSSSGQGSYKEMKTMVIDILKSEDGKKAVEESLSNSSSGGTSGMSMKMMPLQTTEDIKTAVKDTLTAPEYQKEIEKIMTDPKFAGDFAKAIQSQSKELHLQLIKDPTYQKSVEEIMKSPEMMTMFLNLTKTPDYRKQSMKTIQESMQTPLFRMEVLNLLKKVVQDELEPKEQKKGGDSGGKQEGSGSGGESGSGSGDDSST
>NZ_LR698998.1|WP_076138445.1|6117900_6119010_-|Mrp/NBP35-family-ATP-binding-protein
MLTREHIQEILQSITDPETGKSLVELQLIRDIMIKEDRISLSIVCLDPEEQSRMDLEQRVRELLEAGGVTNVHIRLRDATDYERALLRGESAGEEPLADEPGKLKGHAAGLDDHELINENSGVNFIAIASGKGGVGKSTVTVNLAVALARKGKKVGLIDADIYGFSIPDMMGIEEGPVVEEGIIIPVERFGVKVMSMGFFIRENSPVIWRGPMLGKMLRQFFGDVGWGELDYMLLDLPPGTGDVALDVHQMLPHSKEIIVTTPHATAAFVAARAGSMALQTEHEIIGVIENMAYYECKDCGKKDYIFGRGGGARLAETLHTELLAQVPLGAPDNHISEPDFSPSVYKEDTATALLFADIADKLIAKYEH
>NZ_LR698998.1|WP_038573445.1|6119100_6119841_-|N-acetylmuramoyl-L-alanine-amidase-CwlD
MSGRKHSKVSVWISWSSIKKCMLGATLLAIMIGIIAYDMPTAKTLNYWSLPLSGKVIAIDAGHGGADGGAVSREGLIEKDINLAVSLYLRDYLQQAGAIVVMTREGDYDLAQEGTKGYSKRKTEDLKQRVRSIEEKGADLFISVHMNSVPSNRWSGAQTFYYPNHKDNKAIAEFVQSELKTTLENTDRVAKTVNTVYLLKALKIPAILVEVGFLSHPQESVLLGDDVYQRKVATSIYRGILRYASE
>NZ_LR698998.1|WP_111505703.1|6119919_6121089_-|sulfate-adenylyltransferase
MTSIRPHGGTLVNRVVEGTEREELLQLAREYKAIAVNTWTLSDLDLIAVGAFSPLTGFLNEQDYHSVVKNMRLADGTVWSIPITLAVEEDVASGLAIGDKVSLIGEEDGEIYGLLDIESIYTVDQNLEAQNVFKTTDPEHPGVSKLLARPATYVGGPITVLNRPQPEKFGEFYFDPSATRKIFADKGWRTVVGFQTRNPVHRAHEYIQKCAMEVVDALFLNPLVGETKSDDVPANVRMKSYLALLENYYPEDRTFLGVFPAAMRYAGPREAIFHAMVRKNYGCTHFIVGRDHAGVGDYYGTYEAQEIFANFTAEELDITPLFFEHSFFCKKCGNMASSKTCPHPGDDHMTLSGTKVRALLREGQCPPPEFTRPEVAQILIEGMTQEVTA
>NZ_LR698998.1|WP_076138443.1|6121126_6121819_-|phosphoadenylyl-sulfate-reductase
MNLLEKEDLIKVKAEELETASPEEIIRWAVETFPNITFACSFGAEDVVLVDMLHKVSPSTDVFYLDTDYHFKETYETRDLMADKYGLEFVRVSPQITPQEQALQHGEALWTVDPNQCCGIRKVEPLTRILSQYEAWITGIRRDQAPTRANAKKVEYDYKFGLVKFNPIADWTTEDVWNYIRENDVIYNPLHDRNYPSIGCEQCTRQVMPGEDPRAGRWAGSEKTECGLHK
>NZ_LR698998.1|WP_025706574.1|6122047_6122440_-|30S-ribosomal-protein-S9
MAQVQYYGTGRRKHSVARVRLVPGEGRIVINKREMDEYFGVETLKMIVKQPLNLTETLGNYDVIVLAHGGGISGQAGAIRHGISRALLKVDPEYRGALKKAGFLTRDPRMKERKKYGLKAARRAPQFSKR
>NZ_LR698998.1|WP_036680589.1|6122460_6122898_-|50S-ribosomal-protein-L13
MRTTYMAKPNEVERNWHIIDAEGKTLGRLASEAAALIRGKHKPQFTPHVDTGDFVIVINAEKIHLTGKKLQNKKYYRHSMHPGGLKVTNAETLLNTKPERVIEFAVHGMIPKTRQGDHMKLRLKVYAGAEHPHAAQKPEVYELRG
>NZ_LR698998.1|WP_111505705.1|6123127_6123910_-|tRNA-pseudouridine(38-40)-synthase-TruA
MRNLLMKVNYDGTNYDGFQTQPQGNTIQDRLEQAILHLTGERLKITASGRTDAGVHAYGQPFNFTTSSRIPTERWCLALNARLPQDIVVTEAREVPLTFHSRRGAKRKTYRYMINGNRFPDPFQRRWQLHHPVKLDIPAMQQGLTQIIGTHDFTSFASRRSTKTSHVRTIFEAHMEVDRRMCRPSSSDQGVIHTYITGSGFLQHMVRIIMGTLIHVGEGKIPADKVAEILAACDRSHAGPTAVAMGLALWSVEYDEIESE
>NZ_LR698998.1|WP_019908254.1|6124227_6124593_-|50S-ribosomal-protein-L17
MAYQKLGRDSSARKALFRDMVTDLFLYERIQTTEAKAKEVRSIAEKLITKAKKGDLHARRQVAAFVRRETVDGEQDAIQKLFSDIAPRYTERPGGYTRILKLGPRRGDAAPMVYLELVDRA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_20

6252432-6252579

Orphan

Consensus_repeat	Method
CTTGGGCGCGGGCTCGGACTCCAGCGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LR698998_20

>merge|NZ_LR698998|20|6252432-6252579|CRISPRCasFinder
CTTGGGCGCGGGCTCGGACTCCAGCGACACTACTCCTTGTGTGCGGGTTCGGACTCCATTGACGTTACTCCTTGGGCTCGGGCTCGGACTCCAGCGACGCTATTTACATTTTTATCGGCGTTTGAGCAGAGTTTCGGACCCCAGCGAC

>NZ_LR698998|20|20|6252432-6252579|CRISPRCasFinder
CTTGGGCGCGGGCTCGGACTCCAGCGAC	ACTACTCCTTGTGTGCGGGTTCGGACTCCATTGACGTTACTC
CTTGGGCTCGGGCTCGGACTCCAGCGAC	GCTATTTACATTTTTATCGGCG
TTTGAGCAGAGTTTCGGACCCCAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_076123826.1\|6255796_6257095_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_LR698998.1\|WP_111505771.1\|6257123_6258038_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_LR698998.1\|WP_081389096.1\|6248204_6249377_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_LR698998.1\|WP_076137299.1\|6247051_6248212_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_LR698998.1\|WP_036678569.1\|6249394_6250330_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LR698998.1\|WP_076137287.1\|6260637_6261045_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341373
NZ_LR698998.1\|WP_162636861.1\|6240415_6240511_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_038573529.1\|6246605_6246929_-\|L-rhamnose-mutarotase	unknown	unknown	gnl\|CDD\|225793
NZ_LR698998.1\|WP_036678556.1\|6258027_6258714_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_LR698998.1\|WP_076137364.1\|6245227_6246382_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_LR698998.1\|WP_076205709.1\|6259056_6260484_+\|VanW-family-protein	unknown	unknown	gnl\|CDD\|377286
NZ_LR698998.1\|WP_111505773.1\|6261881_6262487_-\|type-4a-pilus-biogenesis-protein-PilO	unknown	unknown	gnl\|CDD\|225708
NZ_LR698998.1\|WP_111505769.1\|6254205_6255672_-\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_LR698998.1\|WP_051491029.1\|6261082_6261685_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374812
NZ_LR698998.1\|WP_111505775.1\|6262470_6264072_-\|pilus-assembly-protein-PilM	unknown	unknown	gnl\|CDD\|227306
NZ_LR698998.1\|WP_076144674.1\|6252780_6254091_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|238487
NZ_LR698998.1\|WP_111505765.1\|6241940_6244949_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_LR698998.1\|WP_147614473.1\|6240512_6241205_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225822
NZ_LR698998.1\|WP_111505767.1\|6251670_6252324_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR698998.1\|WP_076205722.1\|6250494_6251652_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_076123826.1\|6255796_6257095_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.00251e-47
NZ_LR698998.1\|WP_081389096.1\|6248204_6249377_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	8.30372e-28
NZ_LR698998.1\|WP_076137299.1\|6247051_6248212_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	8.52803e-26
NZ_LR698998.1\|WP_036678569.1\|6249394_6250330_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.39591e-102
NZ_LR698998.1\|WP_076137287.1\|6260637_6261045_+\|hypothetical-protein	gnl\|CDD\|341373	cd04598, CBS_pair_GGDEF_EAL, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	8.88888e-22
NZ_LR698998.1\|WP_111505771.1\|6257123_6258038_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	1.84178e-83
NZ_LR698998.1\|WP_038573529.1\|6246605_6246929_-\|L-rhamnose-mutarotase	gnl\|CDD\|225793	COG3254, COG3254, Uncharacterized conserved protein [Function unknown].	2.00245e-34
NZ_LR698998.1\|WP_036678556.1\|6258027_6258714_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	3.34711e-135
NZ_LR698998.1\|WP_076137364.1\|6245227_6246382_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.36591e-72
NZ_LR698998.1\|WP_076205709.1\|6259056_6260484_+\|VanW-family-protein	gnl\|CDD\|377286	pfam04294, VanW, VanW like protein. Family members include vancomycin resistance protein W (VanW). Genes encoding members of this family have been found in vancomycin resistance gene clusters vanB and vanG. The function of VanW is unknown.	1.7402e-62
NZ_LR698998.1\|WP_111505773.1\|6261881_6262487_-\|type-4a-pilus-biogenesis-protein-PilO	gnl\|CDD\|225708	COG3167, PilO, Tfp pilus assembly protein PilO [Cell motility and secretion / Intracellular trafficking and secretion].	0.00018767
NZ_LR698998.1\|WP_111505769.1\|6254205_6255672_-\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	4.03367e-122
NZ_LR698998.1\|WP_051491029.1\|6261082_6261685_-\|hypothetical-protein	gnl\|CDD\|374812	pfam16800, Endopep_inhib, IseA DL-endopeptidase inhibitor. This domain functions as a DL-endopeptidase inhibitor.	2.3875e-23
NZ_LR698998.1\|WP_111505775.1\|6262470_6264072_-\|pilus-assembly-protein-PilM	gnl\|CDD\|227306	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion].	6.70736e-18
NZ_LR698998.1\|WP_076144674.1\|6252780_6254091_-\|PDZ-domain-containing-protein	gnl\|CDD\|238487	cd00987, PDZ_serine_protease, PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.	3.38885e-08
NZ_LR698998.1\|WP_111505765.1\|6241940_6244949_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_LR698998.1\|WP_147614473.1\|6240512_6241205_-\|hypothetical-protein	gnl\|CDD\|225822	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].	1.52947e-07
NZ_LR698998.1\|WP_111505767.1\|6251670_6252324_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.22725e-74
NZ_LR698998.1\|WP_076205722.1\|6250494_6251652_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.44403e-40

>NZ_LR698998.1|WP_111505767.1|6251670_6252324_+|response-regulator-transcription-factor
MIKVLIVDDDPFIRQSLQVLLGMDPDIEVVGAACEGNEALELLQKGLKTDVALMDIRMPGCGGVEGTEKIKQAFPQIAILMLTTFDDDEYIIEALRNGASGYLLKNIPPDRIIQGIKTVFEGNMLIHPDIARKLATFLQPTARQELPQVQPLESFGLTKTELAVVASIAEGHSNKEIAGQLFLSEGTVKNYITDILSKLELRDRTQIAIFYLKSMRG
>NZ_LR698998.1|WP_076205722.1|6250494_6251652_+|sensor-histidine-kinase
MPRELNLLRYGLILIPAFITIYVYQYNDYGIFTLHILMLLFLVVMVPKLPRSIHALISIIEILFTAWLCYQYGSMMLFPAISALLYYSRLQPKAVPYVFTGVHLIALNVALQNSPSLVVTYINLSFLLTAYLNKLLLKAGQRREDTLLLYDELRKKHFELDEARNRLLEFSAQVEESAQSKERVRISRQLHDDIGHRLIRIKMMMEAALQTLPTSPESGMQMMELIRDQLSASMDDMRSAVKRINYTPKLEGAYALDRLLEEIGRETGIETSYQVQGIPYPLYPSIQVILYKNAREAITNALRHGKATSIRIKIDYAQAGITMEVSNNGSLPEEEKLRKLLGSGGDGMKGMYERTHLIGGTLELRQEPHFTVVTRLPIYKQDEIV
>NZ_LR698998.1|WP_036678569.1|6249394_6250330_-|ABC-transporter-ATP-binding-protein
MAIAVLTDVVKRYENKLTVDHVNVTIQAGEIFGLLGPNGAGKSTTISMICGLLKIDSGDIVIDGLSVSSYALEVKKKIGLVPQDLALYNTMTAAENVTFFGRLYGLRGKLLKERVAEALAFTGLSDRAKEKPATFSGGMKRRLNIACAIMHHPKLIIMDEPTVGIDPQSRNHILESVKELNRLGSTVIYTSHYMEEVAAICDRVAIMDKGHIIACGTEKELRERVSQEEKIVVKATNITPELINELSLHPRITRVESKEGTVEMYLPSSQDELQDILFIFAKHEGVIGSLNIEEPDLETLFLSLTGRTLRD
>NZ_LR698998.1|WP_081389096.1|6248204_6249377_-|ABC-transporter-permease
MRNIWTIMIYELRRLFISRSIIINMFLLPLLLIFLLGASLSSVIGDKAASKIDPVRVGVVNLSGEGYESSAMIDSFLKTPELKDIIIPVKVGSRETAESGLRAGKYGYAVIVPLGFDKKVQSGETAQLEFVLGKDRTDNMVAGTVFDNFLNNINYKQSVAMTLGPEALTATAPSLGERPSVKVGALSEGSLSYTASQFYAVSMMLMFLLYSGLTVSSSLFNEKENHTLFRITSMPVKGSELFIGKMLGVGVVSVVQCAAIIILTHLLFGVNWGNRPGLLLLFCLLMIIASMTLSIVISMFSKTKASAGSIVNVITVVMTFISGGMAPLPESWVNSVGAFTLNHWVLQAVLKMMLHAEVSEILPNLLVLSIICLVLFSAAVISYRKVGYHG
>NZ_LR698998.1|WP_076137299.1|6247051_6248212_-|ABC-transporter-permease
MDKILTIAWNMVKRTIGSRNGLLSYILLPCLVVAGVVAISGSMGERPATILYSNMDDGAAGKHLLTELENTGDYKLVEKTDEANLRESIIDQNGEAGVLIPQNFTSALLAGEEPQISVYELKATETSIMVKMKISVIADEMRNTAGLIGAARAEATGSDSQFAAVMQRAEQHSVGSIRTDYDLYPKEGLSIVTGFTLMFLMGLVTSSVSLIMDDRRERTMKRMFSAPVRSYEIALGNFLGSFIVGLIQIVVVLALGRYVLQFDFGLPLYLYFLVLAAFMLVSMGLASTVAGLIRNPNNTGMLNSLILTPTCMLGGCFWPLSIMPDYMQKAANFVPQKWAIQAIDIAATGGGWNELWLPFAILGLMAAVLLAIGSAILRPSEAGINA
>NZ_LR698998.1|WP_038573529.1|6246605_6246929_-|L-rhamnose-mutarotase
MSSNKLAWTWRVKEECLEEYVAMHLNPWPEILEEHSKAGISNYSIFQNGNQFFYCYECEDSKAAFDYIAKSDACNRWNAITSKMVEGSFDFNDEVPMQPLREVFYLK
>NZ_LR698998.1|WP_076137364.1|6245227_6246382_-|cation:proton-antiporter
MEFVLYLMLIILFTKVAGDLSVRLGQPAVLGKLIVGIILGPAVLGWVQDGEFIHYISEIGVLLLMFIAGLETDLDQLRKNWKSAFAVAVGGIILPFLGGFALGEMFGFAYHNALFMGVILSATSVSISVQVLKDMNKLNTREGSTILGAAVVDDILVVILLAVLMSFFGTGADVSIGLLIGKKVLFFAVAIVAGWFIVPRVMKWMAPLKVTEAVISAALMICFAFAYFAEIMGMAGIIGAFAAGIAISQTSFKHTVESKLEPIAYSIFVPVFFVSIGLSVSFEGVGSQIGFVLLLTVVAILTKLFGGGLGARLTGFDNHSSAIIGSGMISRGEVALIIAATGLQSGLLQQQYFTSVIIVVIVTTLVTPPLLKFMFRDPVRAEGK
>NZ_LR698998.1|WP_111505765.1|6241940_6244949_-|efflux-RND-transporter-permease-subunit
MKWLTKWSFGNKAAVGLLVVMALVVGGMSYTSLPMEFMPEADNPQVTVTVLGPGQDTHAMETNVTKPIEAGAAFVKGKKEILSTSGDGYAQVNIFYDSKTNMKDAAQEVQKVVDSLKFPEGVMAPFVLQLNTSMIPVSQVTLAFDEGLTKENLKLAEETIIPEMQKAEGVANVALYGKVTPQVSVKLDPKLMAEKGVTTPQVLGLLQGRNVSASLGEQTIGGQTGNVNVVSTIDSMDTLKKLPVSAGVKLQDIAAVELKQDQESVSRSNGKDVLFAIVTKEANANAVSVGDNIQAAVDHINKTIPNAEAAVVFSTSDMVVTSVNSMMREVLLGALFATIVILLFLRNLRATLITAVSIPLSLAVTLYLLNISGISLNIITLGGVAVAVGRLVDDSIVVIENIYRRLQKEPFSREMIISATGEVARAITSSTIATVAVFLPMGLLRGSLQAFLLPFALTVTYSLLTSLVVALTVVPLLSSWLLRRTSMKEHEPSKWFVRFLDWNLRRKWVSLSLGLLLLIGSIAAYVTMPKGALDASDASYVSVQMNYPKDVPVKDILEKGKQLEQDLMKQPQAETVIMQSGNSADAAKWGNVTSETLVDYTVVMKKGADAQAFIDHVREVKDSYTGATLVANQMSMMGSSSTSEYIDIVGDNLADITTVATEVTAKLKTVEGIQKVSSNMEDTKPVFSFKVDPAQSNAQEISMQLSAMLNPIPMGQIELDGDAAGVVLDPMVQPQTEQDLKALTLMTAEGLKPLSQLATYEVRNEPAMLFHKDGKPYVRITAEVDPKKVSEIGANIKKETDSLTLPKGVTLFAGGASVDQSEDFNDLGMTALISIGLVYLIMVLTFKTLRAPLAIMFSLPLAAIGAIVGLIVSGVTPDFTALFGALMLIGIVVTNAIVLIDRIKQNEANMSIHEAILEAAGTRMRPILMTAIATICAMTPLLFGHAEMGSIVSQSLAIVVIGGLTAATLLTLIVVPAIYELFYFRKSAKERKRAEKTNAPAI
>NZ_LR698998.1|WP_147614473.1|6240512_6241205_-|hypothetical-protein
MNILECERAWFTVDDVDKNFNNSLCEFYQPWNNLKTEKSFSIEELVPYEILVEVLHSELAKVTEFLLLPFVFFLTDRAGNIINIVSPFETFQEKVDHYGIRSGTNLSMQVSGVNAVSLAMEVESIAVVRGEEHSMPMFKEWNCVCAPIMVNECICGYIDISFEAERQLGFSILFIKQLSEKIVLKLKEQSPKLIEYRFQEKCDTYGLSPRERGSVSLVAKKRGTANFQRS
>NZ_LR698998.1|WP_162636861.1|6240415_6240511_-|hypothetical-protein
MKEGTVRNIVKSIYSKMNISERWELIEILKL
>NZ_LR698998.1|WP_076144674.1|6252780_6254091_-|PDZ-domain-containing-protein
MNVIQELLGSLGTAFLHLLIQPYYYIAIIFIALYYRRQVALERKLIHVKLHSWGQETWRTVWSGLVMGLVVSIAAVLLGISLSGTAVACIWVVSLVLSLLRVRYLCFAYSIGLLGIIQFVISFFPDALDSGTVGNITTAIREMDIPALLVLAALLHMAEALLARRQGAKLATPLFLKGKRGMVVGGYQLQAFWPLPLFLLLPSGAGTDLPWHSLLGGSLGIVSLPVIIGFSEMTQGMLPGRKAARTAGRLLIYSIVLLGLSLLAAWWSPLTLVAALAAIVLHEGLSWYSALEERSISPIFVHPPRGRKVLAVLPGSPGQELGILPGEILLKVNGVLLTDAAQLHEALRMNPAFCKLEVLNREGESKYLQSPIYDGDHHQLGIILVPETDGMITAEAKPSSIYSIIGMKTGIRSRNLPDGQLKRKKTTEAKQESAEG
>NZ_LR698998.1|WP_111505769.1|6254205_6255672_-|S41-family-peptidase
MLKKSTAAFMIIAALLCGSLVTLGVTGYSHVIGQAAGEGLASALQVTGLQQKESQKLGTALSLIESNYYETVDREKLIDGAVNGMMEALGDPYSNYMGKETAEKFEESIEGSFSGIGAEVSSDNGKVVVVSPIKGSPAEKAGIQAKDVILSVNGESLEGMELNAAVAKIRGPKGSEATLKIQRSGSVEPLEFVLTRDDVKLETVYATMEKDNVGVIEVTQFSLNTAERFKEELEKLEKQGMKGLVIDVRNDPGGVLPIVIEMAEQFVPAGKSIVQIEYKDKKREVSTSKGSSKAYPVVVLMNKGSASASEILAGALQQSAGAKLIGDNSFGKGTVQTSFDKQLGDGSLLKVTIAKWLTPDGTWIHGKGIKPDIAVAQPDYFSVAPINKSVALQNNMNNADVKSAQTMLDGLGYKPGRKDGYFDAGTKDAVKKFQSAAKLQVTGIIDAKTAEALEAALIKVIQDPAHDNQRNKGIAEIQKEIKAAASKK
>NZ_LR698998.1|WP_076123826.1|6255796_6257095_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MKKIAAGLAVMLLAVTIFQPSDGYAKKTSVAEIDKQLKQLQQEVQEAKAQQEKAESQTQEAQHYKNKTNINLQYVLQQVDQVKGKMTEISNKISDTEESLNVTATELDEAEARVASREELLGSRVRLMYTDGAVSYLDVLLSSTSFSDFLGRTDSLKMIVDQDQELLVQHKLDKQTVVEKKQELEGQYAQAKQLYTSLENQRSLLKEKEAEKQELIAFYDKQIQESDDLSEEQNEKLVKLASERSALETQKDKIKAEEAARKAAAAKAEAARRAAAAAKKAAASKASSSSSSSSSTAYAGGDGPFLLPVGSARISSSYGPRTHPITGEKGKVHTGVDFAVPQGTNIHAADSGTVIVAEWYSGYGYCVIIDHGGGVWTLYGHIRKGGIKVSPGDRVNRGDVIAESGSTGNSTGPHLHFEVRIDGKTVNPMPYL
>NZ_LR698998.1|WP_111505771.1|6257123_6258038_-|ABC-transporter-permease
MSFKTFLRHVREGFKSVFRNGWMSIASITSIVVSLFVLGVFILLVLNVNSVADEADSQVQIKVHLALNTDQKMRETLQTEIGNMPEVSKITFISKEQGLKDLRADMGEEAAELLEGFDEDNNPLPDTLQVEVIEPTTVAFVAEKIQALNKTHTEQPIYKVKYGKGSIETLFKITRAVRNIGFIFVAGLALMSMFLISNTIRVTILARRKEIGIMKLVGATNYFIRWPFFIEGALIGLIGSLITSSVLYAGYKGLESSIQGDPMLGLQLIPFSDIWLLLVGLLVGLGVLIGVWGSTVSIRKFLKV
>NZ_LR698998.1|WP_036678556.1|6258027_6258714_-|cell-division-ATP-binding-protein-FtsE
MIEMQDVWKTYPNGTHALQGVSVKIDRNEFVYVVGPSGAGKSTFMKLIYREEVPTKGQISVGGFNIGKLKPRKIPYVRRNIGVVFQDFRLLPRMTAYENVAFAMEVIEAPKKVIKKRVNEVLDLVGLRSKANREPSQLSGGEQQRIAIARAIVNNPSVIIADEPTGNLDPETSWGIMQLLDEINFRGTTIVMATHNRDIVNKMRKRVLAIENGNIVRDQARGEYGYEF
>NZ_LR698998.1|WP_076205709.1|6259056_6260484_+|VanW-family-protein
MKKIHAALIVVIALVLIGSCIYGGLHLYGSKTTLPKGTTLAGWQVGGMTLTEVRSQLDKRLHALESVPLVLKVEGNADLPLTLSKTGLSYEASAFQQGLKELAEGTLWERVKARYNFPQQWRLETHLEIAQFQKILSPTWEKESFGEPVDATRRITGDDRIVYTSEKTSLEVDWTALETSLGAAAPTSFNHLNTLLEKGITMEVPLLILQPDITLKKLKEQGIERKVMQFSTSLGASGPGRSYNVEAAAKAVDGTILPPGAVFDYGKAIEKAKVNYGFREAPVIVNGKLQAGVGGGICQVSSTLYNAALRIGLEIVERRNHSLPVNYLPKGQDATFAEGYINFRFRNTTGKYLIIKAAVQGKSLTIKLFGTFPQNVTYKVHSKTVEVLPPVDKYVNDSSLPRGSSRVIQNGKTGYIVETYITKYVDGKSTEVNKLSRDVYYAQKRLIAINRGGVSKSIIPDVPRKQLVEDGVRSE
>NZ_LR698998.1|WP_076137287.1|6260637_6261045_+|hypothetical-protein
MTTALVNDLTGIVRSAPAIFASRTCREALRVMFQHPESKCIVVCNAMNEPLGMLMSERFFLKATGRSGVDLFYREPAMKLMNKTPLILDISTPLDMVLSLAMNRPDPMKNDCVIITRKGKFVGVAYTSDLIRAQA
>NZ_LR698998.1|WP_051491029.1|6261082_6261685_-|hypothetical-protein
MNKKWMLGSLALSLGLLSAGSGVMAASSSVGSSAIKNVAVIGTGKEGPATINNLTVKSVVPLVVHARAIYFYTSRGGNFFPMETFMYKAQEYRYLSNDIGTKAKLMNYIKKAYTHNAAAYYVQTQFLEHEGRMSQVNADLGNSLMFEKATARMLSKTATTAEFDLTVPYSSGQEGSESVYVKLKKVNGYWRIDTSPDILF
>NZ_LR698998.1|WP_111505773.1|6261881_6262487_-|type-4a-pilus-biogenesis-protein-PilO
MEQINKYRSPIVLGVLILFLILFAFYMLGVQPANKEISAQSSEISQLEKEAEMLQTKINELKGSGTEGDLEQKELLGELPKGDDSEGLIVDLREVSTSSQARLKDLSFVMDEVNPIQQMTGSAEVSFPTVKQIKMTAVVEGTYSGIRQWMDELQALPRIVNVDSFNFQQSYEDRTKNNTESILTANVAFTAYFEATAAASN
>NZ_LR698998.1|WP_111505775.1|6262470_6264072_-|pilus-assembly-protein-PilM
MLGLGSKVAGLSIEAAGIRYISFKNKQSWEVRKKRFLPLLPGMIIENQVADSEALYDRVRQWVKKEGLRGSKVSLSIPPSQIIIRKMSIPSTNDKQVEQLVKLEVETGLHLPFENPVYDYVTLEVDEEQSHLLVFAAPRKSIQDYVEILERAGLRISSVEISATALARAITTGHGESFAETMLINMEPSVMDIYMFRNGNPVFIRTINLLDLHKGRNLAGMDLLTDSETLAETAVAVEEHLSPEQMVEITAEISRMLSFYQYSLHDGSTRINNLVITGTPSIRKQLDLELQQSLAELEITPISLEQMASAAVSDPELNDYRVAAGTALKNSINTDTIDLLPREDRETLLFPYVTMGLVAIWLLGMIGTGIYFSANKGQISNGKEQLQGLQDRSFMLQVELAKLKNSGPGQLDRKAAITVLQDNKVIAVPILDELVEGLPKEALIRDINYTYRTSIDLTVNVSTMEDASNYLRQLRQMSFTADASIQKLTEGAADAISYNMYTAIYKVNLAAAKQQNSETDASQGEVSGDGTDQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LR698998_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR698998_21

6738309-6738398

Orphan

Consensus_repeat	Method
TTGCCGGTGCCGGGGTTGCCGATG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_LR698998_21

>merge|NZ_LR698998|21|6738309-6738398|CRISPRCasFinder
TTGCCGGTGCCGGGGTTGCCGATGTTGGTGTCGGTGTCGGTGCCGATGTTGGTGTCGGTGTTGGTGTCACTGGTGCTGGGGTTGCCGGTG

>NZ_LR698998|21|21|6738309-6738398|CRISPRCasFinder
TTGCCGGTGCCGGGGTTGCCGATG	TTGGTGTCGGTGTCGGTGCCGATGTTGGTGTCGGTGTTGGTG
TCACTGGTGCTGGGGTTGCCGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR698998.1\|WP_036682412.1\|6743390_6745982_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_LR698998.1\|WP_076132891.1\|6739528_6739999_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|273138
NZ_LR698998.1\|WP_111506022.1\|6735257_6736214_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223677
NZ_LR698998.1\|WP_036682401.1\|6734821_6735256_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_LR698998.1\|WP_111506018.1\|6726571_6727969_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275256
NZ_LR698998.1\|WP_111506020.1\|6727965_6729426_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223714
NZ_LR698998.1\|WP_111506026.1\|6740105_6740414_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR698998.1\|WP_052097394.1\|6729444_6730677_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100083
NZ_LR698998.1\|WP_036677839.1\|6751600_6752080_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NZ_LR698998.1\|WP_111506016.1\|6724962_6725898_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|335768
NZ_LR698998.1\|WP_111506028.1\|6745978_6746662_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_LR698998.1\|WP_036682411.1\|6742418_6743339_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_LR698998.1\|WP_051491238.1\|6731357_6733913_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_LR698998.1\|WP_036682398.1\|6730636_6731350_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_LR698998.1\|WP_111506030.1\|6746686_6747625_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_LR698998.1\|WP_076105145.1\|6740740_6741409_-\|cyanophycinase	unknown	unknown	gnl\|CDD\|153223
NZ_LR698998.1\|WP_111506014.1\|6724012_6724858_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LR698998.1\|WP_076099770.1\|6741430_6742324_-\|DUF2785-domain-containing-protein	unknown	unknown	gnl\|CDD\|371322
NZ_LR698998.1\|WP_111506032.1\|6748803_6751047_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_LR698998.1\|WP_076105142.1\|6734039_6734573_-\|polyisoprenoid-binding-protein	unknown	unknown	gnl\|CDD\|225228

Protein	Function_ID	Function_description	E-value
NZ_LR698998.1\|WP_036682412.1\|6743390_6745982_-\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.98329e-16
NZ_LR698998.1\|WP_076132891.1\|6739528_6739999_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|273138	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase. This model is similar to Pyridox_oxidase from Pfam but is designed to find only true pyridoxamine-phosphate oxidase and to ignore the related protein PhzG involved in phenazine biosynthesis. This protein from E. coli was characterized as a homodimer with two FMN per dimer. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine].	0.00349989
NZ_LR698998.1\|WP_111506022.1\|6735257_6736214_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|223677	COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only].	2.13914e-41
NZ_LR698998.1\|WP_036682401.1\|6734821_6735256_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.43689e-12
NZ_LR698998.1\|WP_111506018.1\|6726571_6727969_+\|radical-SAM-protein	gnl\|CDD\|275256	TIGR04463, Radical_SAM_domain_protein, radical SAM/SPASM domain protein maturase. Members of this family are probable protein/peptide-modifying radical SAM/SPASM domain proteins. The majority of members of this family seem to target Cys-rich repetitive regions of large proteins rather than of bacteriocin-sized small precursors. This arrangement suggests the modification target may be multifunctional, with the C-terminal domain behaving like a bacteriocin but other parts of the same precursor serving an immunity function, as occurs for the halocin C8 precursor.	3.03456e-35
NZ_LR698998.1\|WP_111506020.1\|6727965_6729426_+\|radical-SAM-protein	gnl\|CDD\|223714	COG0641, AslB, Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only].	6.51697e-32
NZ_LR698998.1\|WP_076099770.1\|6741430_6742324_-\|DUF2785-domain-containing-protein	gnl\|CDD\|371322	pfam10978, DUF2785, Protein of unknown function (DUF2785). Some members in this family are annotated as hypothetical membrane spanning proteins however this cannot be confirmed. The family has no known function.	1.60483e-58
NZ_LR698998.1\|WP_052097394.1\|6729444_6730677_+\|hypothetical-protein	gnl\|CDD\|100083	cd06162, S2P-M50_PDZ_SREBP, Sterol regulatory element-binding protein (SREBP) Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50A), regulates intramembrane proteolysis (RIP) of SREBP and is part of a signal transduction mechanism involved in sterol and lipid metabolism. In sterol-depleted mammalian cells, a two-step proteolytic process releases the N-terminal domains of SREBPs from membranes of the endoplasmic reticulum (ER). These domains translocate into the nucleus, where they activate genes of cholesterol and fatty acid biosynthesis. The first cleavage occurs at Site-1 within the ER lumen to generate an intermediate that is subsequently released from the membrane by cleavage at Site-2, which lies within the first transmembrane domain. It is the second proteolytic step that is carried out by the SREBP Site-2 protease (S2P) which is present in this CD family. This group appears to be limited to eumetazoan proteins and contains one PDZ domain.	0.00182434
NZ_LR698998.1\|WP_036677839.1\|6751600_6752080_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	3.25441e-82
NZ_LR698998.1\|WP_111506016.1\|6724962_6725898_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	gnl\|CDD\|335768	pfam04397, LytTR, LytTr DNA-binding domain. This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.	1.36114e-25
NZ_LR698998.1\|WP_111506028.1\|6745978_6746662_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.90668e-104
NZ_LR698998.1\|WP_036682411.1\|6742418_6743339_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	3.82167e-57
NZ_LR698998.1\|WP_051491238.1\|6731357_6733913_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	9.99641e-24
NZ_LR698998.1\|WP_036682398.1\|6730636_6731350_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	8.88662e-116
NZ_LR698998.1\|WP_111506030.1\|6746686_6747625_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	1.74906e-16
NZ_LR698998.1\|WP_076105145.1\|6740740_6741409_-\|cyanophycinase	gnl\|CDD\|153223	cd03129, GAT1_Peptidase_E_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus peptidase E is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	0.000652169
NZ_LR698998.1\|WP_111506014.1\|6724012_6724858_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.12929e-86
NZ_LR698998.1\|WP_111506032.1\|6748803_6751047_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.30595e-92
NZ_LR698998.1\|WP_076105142.1\|6734039_6734573_-\|polyisoprenoid-binding-protein	gnl\|CDD\|225228	COG2353, COG2353, Uncharacterized conserved protein [Function unknown].	4.28362e-59

>NZ_LR698998.1|WP_111506022.1|6735257_6736214_-|zinc-binding-alcohol-dehydrogenase-family-protein
MRAAIVKDKGTIPVMGHCASPVGTDGLVIINVTATALSRVSKFRSMGMHYSSEDNFPIVAGIDGVGTLKDGSRVYFALPTAPYGSLAEQTIVNEKLTVRLPDGIDDLTAAAIANPAMSSWAALVFRAGFKSGQTVLINGATGASGSLAVQIAKGLGAKKVIVTGRNESKLQALEADEAIAFDMTADNGQKMFENALMPVIAEGVDVILDYLWGDSALAIMSALAKAKTDRSTRFVSIGTSSGQESIHLPSSLLRSSTIELVGSGDKSVSKADMLSAVRGVFEMATEGKLKITTKEFALEDIEEAWNAPLMPRPVVRVK
>NZ_LR698998.1|WP_036682401.1|6734821_6735256_-|winged-helix-turn-helix-transcriptional-regulator
MENDIFKALIDLVSIINRPDRDKKMIANAGVNLEAATFRVFVGIVHLQPTSVGDLAAMMGKNYSSVSRQIDKLENAGLVHTYPSSADSRIRVSELTKSGEEINAMISLTRERILHEALDDWTLEEKNSLLNNLRRLFESLQRFD
>NZ_LR698998.1|WP_076105142.1|6734039_6734573_-|polyisoprenoid-binding-protein
MSNIKWEVDPDHSSVEFSVTHLMINKIKGVFERFQAILSFDPNELTTMGIQASIDANSITTRQAQRDEHLRGDDFLHAAKYPTIAFQSTNCVFAGERQYELTGNLTLHGVTQSVTFHTVFEGLNKDPRGRERVGFHSTASIDRNEFGLKFNSPLETGGIIVGNEVRIELCIEAIKIL
>NZ_LR698998.1|WP_051491238.1|6731357_6733913_+|FtsX-like-permease-family-protein
MIWLSSAGRSLLRNKLRTIFTILSLIIGSASFFSMFLLSELAPRSIENSAKLLLGGDVLVQSYLKPLQSNIVNDIFQDMGEIDSHSSSYVGQSMVQSKNKTTSVILKGIDTKTYPYYGENQYPGIRSLQANEVLLADNAADRLQVKVGEKIWLPSASDGSLHEYKVKGLVLNVQESYGDADIFGAAYLPLNEAANLLNAPAGSTNEILIHWKAGTPKTSWQAELEKHLPSATLTDTKERTDESLAQAKTLLLLLQLFSLLALGISALTVSNTMKQAMSTRMRDIAVMKAIGVRSRSVAGTFLTEGILIGTIGTITGIVTGLLVSTWLTSYVGKMLAIPLSWEFSWKVTIVTFAVGMLMALISTWIPLKGMLIVSPMQLLLEGNHQIPSYRVRFWKRGLLLLLISLVVAFYLQKTLFLGSTESISSRVVLSFLGILLIIILVSIFVKVCSSAFSFIFRVVGSMRKLISPRWFIPFHNLSSGRKRYGLLALILSVGVASAVSSELFADNLTQSVSQQLETEAKGNLLITSSLVESEAVKEAFQSLDIKKWTEGVQMNGLLSSINGSEATSLFQQKSDGNKFFASNKLSIEGVDPSLASRSYSIIGGRDLIEDDSSHKTALLLEDYQQLGIKTGDTVEVTMGEKKIPFKIVGFFESGFVKTVGMRTTKDILSKYGAPNRVMFSIDGGTLTTGLLSELNGVLPASAMAYSVSSTASESLNSMIRMISVFFSIVTLFAFITAILTIGNQIVISLLRKRREIAIIKAVGVSNGKTLRSILLENFVLSLVSGTAGTGIALLLTTVALKLMFKLPVLVDVKWVIYGIGLCVITTLSVAWIAARPALLTKPTQLLQTNQL
>NZ_LR698998.1|WP_036682398.1|6730636_6731350_+|ABC-transporter-ATP-binding-protein
MIVEQPILAIQNLNKEYESEAGIISVLKGINLKFYKSEIVSIMGPSGSGKSTLLGIMGSLDKPSTGKIALEGKSIESLSEEKLSDYRAQKIGFVFQSFNLISTMTALENVMLPMFCIKGTRHSEIRKKAEEMLKLVGMGDRMKHLPNQLSGGQQQRVAIARALINKPSLVIADEPTGNLDRDSGQKVLDLIFRLKQQMRMTFIIATHDPEVASKSDRVIYIRDGRVETEDPCLSKGR
>NZ_LR698998.1|WP_052097394.1|6729444_6730677_+|hypothetical-protein
MNAIAATKYPQLIPYIIHEMDVWEEGARYLVHFDNGLQMKVTEKILTIFNCMDGKKSLLEISEQLLEKYEVAPRLEELQYLLEHLLTEKGIVVGSEKIAEHSSAIRFRTPLLNASRLEGCSQPFQHLFSLKGICIFGVLMSIALYNYIINLSLSANKADLGSYLFWIITFFMILFSAIFHEFGHTVAAFKYNVKPRDMGIGLFFLAPVLFVDLSDAWKASRKERVVIDLGGIYFQLWIFIIYELSSIITGSNILFTANHFILLSIISNLNPLLRLDGFWVLTDILGIPNLHTRTFTLVKQGLLGYVCRKRLFREKFRLNIINMSSTYKKVFLAYSSLYLIVFSIALMYMLRFIFSFTSLFHSWNWTNFKGLLIVIVILILHFTILLIKKINRKKENSVDCRTTDSGHPKS
>NZ_LR698998.1|WP_111506020.1|6727965_6729426_+|radical-SAM-protein
MIKSTYNSIHPINNGNYILINSLSGAVDVVDGQVKERLDRIEQTNLQRDNQDEVELLTFFKKRGYIFHSLAEEQQILFKVKDAMEKMTAKSKWGMTFNVCTTYACNLRCPYCYQGHQIHDHNHALDSDEITKMFEAITQIIKMEENRGRFIGAQHRMVLYGGEPLLPQTKNTVKEVVERAVNEYGFRMCAITNGTFLHQFLDIFQPYRDQWDFFQISLDGPKAVHDKRRIMAGGQGTFDRIVQNIDMALERGFAVATRTNVNKENLGHLVELANFIEQKGWNKFPHFGWQVTPVTNHFSEPMPDHLPEHELLIALYEMFGDLDSFIDKYNARLGSVINMRTSRIRNTIRSFDWSRMDDMDACTSSGVTSVPHFKECSAREQRFYSFGTEGLIYACPDSVGRAETAVGSFFPKYELNSEAHQQWDRGITDSKECTECSISLFCGGGCAYANLMRNGDITKPYCNYANETIDVYIKHNKHLFEELGTV
>NZ_LR698998.1|WP_111506018.1|6726571_6727969_+|radical-SAM-protein
MIVNKYHLRYEFDEKNLVINTLTGAVDFFSAEMLDLLDSAESWELSNYPPELKEDDIEFLLRRGYIFENNEDTERRLNQASQIMNYDQFMHYIICPTYACNFRCTYCFEDHLLHESTRFITEEQIEHAFSAIDILHKESGMDKGLINLFGGEPLLPPAKNMVEKICEEAEKRNFIIGCNTNGYHLKAYADILERFRDCLSVMVSVDGPEEIHDSRRFLSGGQGTFQRIHQGVNELLNRNIPVMIRINIDQTNIKTVPELIKYYHQCGFFGHPSFSITFAPVTDHTCLGLSSTLMKGYEIAKSLIRHVPNFTELEKQKKIGLSPEMFRFFRTGMLLDPELQDRVGIISPQLVYCEATEGKTYAFGPDNNMYACPDLVGKSEYRIGQFSPVFTKEPVFDQWRNFNVLQIPKCKDCSAAMICGGGCAAQALSTYGDLDLPCCPDAKNMLGQYLHELQEEAAQYEEVKS
>NZ_LR698998.1|WP_111506016.1|6724962_6725898_-|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein
MQFQPIYYNGELFLPKIELNMTPNQSVGIITDLKRKQLLMNQLGDHSQYYLFRAGQNEYMRLTVEELITFLIRVTERNERAASLIDYFALKEERKVKIKDLSSSKRMYVTLLRVFFAHQSTLVLEEPYFYLEEQDCRQLKRILDDLSQEKQILILTSNLEDALISCDAIYRLNESGFHPLDIRDFDEDKQEVQKQDEANITLQKISTKRNDKVILFNPPEIDFIESVEGSILVHVGGENYDCALTLTELEQRLLNFGFFRCHRSYIVNLQKVREIITWTKNSYSLRLNTGQDAVVPLSRSKLSELKALLNI
>NZ_LR698998.1|WP_111506014.1|6724012_6724858_-|ABC-transporter-ATP-binding-protein
MNVIRVERIRKRFGEKDALADVSFSIPKGEIFGFLGPSGSGKTTLIKILTAQLNPTSGQASVFDQPAEMMQQSAQKMRFGILTDNSGLYERLSIEENLELYRKLYDLPKSAVDKVLQFVNLSGERKKKANLLSKGMRQRAMLACAIIHEPELLFLDEPTSALDPVNTAHIYKGLRYLNEKGTTIFLTTHDMSEAELICNRVAILYQGQIQTIGSPKELKRQHRENVICVDLINGETYELPIDEGTADQIADWMKRGLIDRLETKEPSLGDIFIKMTGSELL
>NZ_LR698998.1|WP_076132891.1|6739528_6739999_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MSKYDEAMKLLEEQAGNKDGLISLSTIALEPGANGKSRPAARIVDAYYEDGAFYTVTYATSGKMQQIAQNPEVAVCIIVENFTADGIGENLGWVCDEKNAEMMKKLRTIFAGWYNEANNDEDPNTCLLRIRLTKGLWNDAHKGIRNEIDFINKTAN
>NZ_LR698998.1|WP_111506026.1|6740105_6740414_-|hypothetical-protein
MKFIYIDPFTQEEKLINEETYRFGVQFTIPSKSVWGLGVTGIGWKALDGAPEIDEYAMNLVPAQNVTYELILPDEGSGEGGEGENPGFPGFPGSQFPGLRVL
>NZ_LR698998.1|WP_076105145.1|6740740_6741409_-|cyanophycinase
MSTHYYFSWFNHFFPEKLVHCLHEDIQDRKSLVMISADPSGYTEEPINFDDISEWTWLNQANIIFDEYHFIDYRMQKEDAQRFIQNASVIFLCGGYPVLQKDFLADYELSDVIKNSDAVILGASAGALNMSAQWLSLNDTGHEVETSTIYEGIGFDHFAYESHSKRGYATFVQGYLFPLSEEIDVYAAEQESAIRVKDGKIETMGPLYLISRSKIQKLVETL
>NZ_LR698998.1|WP_076099770.1|6741430_6742324_-|DUF2785-domain-containing-protein
MKASILDDDFNEWGTEDTRTELIRKLQRLEEERYILREGERLQDFTNLMLRHIGDPESELREQIYSTFHIWLKRDNKFSCAEMQHLLAVLMDDRHLFYQIGSEDDHSVLTRAFAVLPIVLIVQRHRNNSFLTPDEFQHLKHSLLRYYQEEKDLRGYLAVEGWAHAAAHGADALEELIRCPESDNAVQREVLGAIKGMLHNGVRIFDEEEDERMASIVETMISEALLPQQEIADWIHSLSLCTEWPDTRAPRIARVNGKNFVRSLYFRTRAHNDGNNLILNGAMLTAEAKLNHFKEAN
>NZ_LR698998.1|WP_036682411.1|6742418_6743339_-|YafY-family-transcriptional-regulator
MRVDRLLSMLLIISGKGTVTGKELAEHFEVSLRTIYRDIEKLGEAGIPVASSSGKGGGYYIMDSYNISGLFLNRDEAHTFVAVMKNLHGLFGRNEAFNDIMLKVEHTYKREPEKHKLTLDMSHFSMEQEIKEYIGIISKAITDNRLLVFDYINRDMEYLERTVEPSWIDFRHGDWYVIGFCRVRGDYRRFKLVRIKQLKQGPPFVKRELPDDRIAEVIEHSYSQRDIQVVLRFTSRIGAQLPEYFQKEKISRGEDGFYLVSDTFPYEEGLLKFILSFGKECELLEPRELRAELQQYMQNMLLSYND
>NZ_LR698998.1|WP_036682412.1|6743390_6745982_-|FtsX-like-permease-family-protein
MNIVNTLTIRHLKQNKRRTLVTIFGVIISVSMMTAVITLIFSFADLMIRQTITDTGEWHIQYQDITKKQLAAIQGDDATKTVAITRDLGYAPLEGGQNSNKPYLFIKEYDVQGFTQFQIEISKGRLPHTDKEVVISESVATNGKVKYEIGDRLTLRVGDRFEQGGDHPLDQTEPLRRKDGTLTETLQHSIIRDYTVVGFIKHPVSETAWAPAYTIISYVDDHIIGGDDRVDASVVLQRVNPFLFAHAEKLAEKNQIDTVQYNDDLLRYYGLSSSGASSSMMFSLSAIIIGIIIIGSVGLIYNAFAISVSERSRHLGMLASVGATKRQKRNSVFFEGIVIGLISIPIGILCGLAGIGIAFSFMNTMIEGALWTSEKLRLIVTPLLLLITCLVSMLTIFVSAYLPAVKASRVSPVDAIRQTTDVKLTAKAVKTSKIIRKLFGIEAEIGLKNLKRNKRRHHVILFSLVISIVLFLTISFFTTGLTQSLALSLEGINYDIEVSSSNGERLDDRLMQSLVSLVGVTEYNVSHELVGNAWVDAASIADELQEKVKQDKSMLQDGKYPYEIKLYAMNDSSLQAYARAVGADYEQLTDLDHPAAIVMDTIHYKDIDTGKYIQTKSIYANIGQHIELMSFIKASGEETKANKVIFAALTDKAPMGMSPVGVGGLNMIVSERVMNRLADGEELANASMYLHLKSTEPVKTQQEIEAMNETNLNVYNVYQFRIREEQQILLMKVFSYGFIVLISAISVANIFNTISTGLALRKREFAMLKSVGATPKGFAKMLNYESVFYGVKSLLYGLPVSFAVMVLIYKAFANKFSYGFTLPWMSILSVIVCVFVIVSSAVVYSGAKVKKENIIDALKQENI
>NZ_LR698998.1|WP_111506028.1|6745978_6746662_-|ABC-transporter-ATP-binding-protein
MEILTIENLSEIYGTGETAVKALDDVSFSVQKGEFVAIIGPSGSGKSTLLHMLGGVDRPTGGKVYVQDTDMYTLDETQLAIFRRRQIGLIYQFFNLIPVLTVEENIALPLLLDQQKVDQKQLADLVNTLNLQHRLNHLPNRLSGGQQQRVSIGRAIIGNPAIMLADEPTGNLDSRNSSEIVVLLKMLNKTYHQTLIVITHDERIALQADRIISIEDGRIAKNEVIRR
>NZ_LR698998.1|WP_111506030.1|6746686_6747625_-|VanZ-family-protein
MQMKQQRKITFFITIGYTLIILYFMFFAFGRADKVDLTSQYTFIFLPDDFFRVPGLSDLLHPTLMDLVGIGNIAAFIPFGILFPLLYRTSFVRFMTGFILSILVVETIQALTFLGSFDTNDVIKNSLGAAIGFGAYKIGFRTKNYWRNITATGIASAVLMLGVWGVLGVVDQVFTKELAPFVAINEWEDSTGNRLTETKQDSLKIGGQDVTPQYNVYGIEGKKKETYTYSLGNKGDLYLSLNYGIPDHKDFQGSIKVTVDGHELLSVSAEDQLHEPDMRILYLTGANELKITIEGNETLWDVGYREMVYTWN
>NZ_LR698998.1|WP_111506032.1|6748803_6751047_-|U32-family-peptidase
MSELLAPAGNMEALKAAISNGCDAIYLGMQKFGARAYSSNFDLETLKEAVTYAHLRNVKIYVAMNTIVFENEVEEMKVQIQELNEIGVDGIIVQDLIAFDYIVKNFVDMEAHCSTQMGIDDLDGTLLFKELGAKRVVLSREVKIEKVKEIKRIAEIPLEIFVHGALCVSYSGNCLMSGLLGNRCANRGRCVGSCRKEYELIDKTTDTSLGKSYILSTKDLNTIDYIHDLKEIDSLKIEGRMKAPTYVANVVSKYRKALDHKITEEDKENLKKTFNRTFTKGYLFHEDRRNITNILKPNNFGYEIGTISGIVKDMYEITLTRPLNQNDTIRISHNNEDVNLTVAKLYDKDGELINKAEDVCYIKIKEKMSKGDLVYKTKDYFYNKELEASLEKEFKRFDLDIRVYAYPGSKLVIEAEGLDFNYFYESEEILGEAINNPTTKDQVIKQFSRLNDTIFELNHVEYEECNAFIPAKLLNAARRDIVLGLYDLKLNSQQKRTKALEAKEKISFAPGKPYLTASVTTKEQYDACVSCGIKEIYYENVVRRNQNDYKEQEGQLLIGGYGGINHYRETNPFVTDYSLNVINATSCYELYKLGAKRVTLSYELNKGQIEDLMNAYVKENDGYPALEMIVYGRAPLMFTKYCPMKKMNQCRICKTKSYELKDEHGTFPIISHDDCTTTLLNGKTLNLLDELQDIQGIEALRLNFTVESKEQVVKVINIASGKLNGSMNNAVFNQETDTRGHFNKEIV
>NZ_LR698998.1|WP_036677839.1|6751600_6752080_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MLIQIIGVGKLKEKYLIDGIAEYAKRLTPYLKFQVIEVADEKAPDSLSEAEVVQVKGREGERILAQIKSEAHVIALAIDGKLWSSEELAAEIDRLGTYGTSHVVFVIGGSHGLSDEVMRRAQQRMSFGRMTLPHQLMRLVLVEQVYRAVKINRGEPYHK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LR698998_4	4.3\|1198140\|19\|NZ_LR698998\|CRISPRCasFinder	1198140-1198158	19	NZ_LR698998.1	1198164-1198182	1	0.947
NZ_LR698998_4	4.3\|1198140\|19\|NZ_LR698998\|CRISPRCasFinder	1198140-1198158	19	NZ_LR698998.1	1198170-1198188	1	0.947
NZ_LR698998_4	4.3\|1198140\|19\|NZ_LR698998\|CRISPRCasFinder	1198140-1198158	19	NZ_LR698998.1	2989272-2989290	2	0.895
NZ_LR698998_6	6.3\|1953828\|22\|NZ_LR698998\|CRISPRCasFinder	1953828-1953849	22	NZ_LR698998.1	1501232-1501253	2	0.909
NZ_LR698998_6	6.3\|1953828\|22\|NZ_LR698998\|CRISPRCasFinder	1953828-1953849	22	NZ_LR698998.1	3115811-3115832	2	0.909

1. spacer 4.3|1198140|19|NZ_LR698998|CRISPRCasFinder matches to position: 1198164-1198182, mismatch: 1, identity: 0.947

ggtgctagtgctggtgctg	CRISPR spacer
ggtgctggtgctggtgctg	Protospacer
******.************

2. spacer 4.3|1198140|19|NZ_LR698998|CRISPRCasFinder matches to position: 1198170-1198188, mismatch: 1, identity: 0.947

ggtgctagtgctggtgctg	CRISPR spacer
ggtgctggtgctggtgctg	Protospacer
******.************

3. spacer 4.3|1198140|19|NZ_LR698998|CRISPRCasFinder matches to position: 2989272-2989290, mismatch: 2, identity: 0.895

ggtgctagtgctggtgctg	CRISPR spacer
ggtgctagtgttggtgttg	Protospacer
**********.*****.**

4. spacer 6.3|1953828|22|NZ_LR698998|CRISPRCasFinder matches to position: 1501232-1501253, mismatch: 2, identity: 0.909

accagcagcaacgccaacagca	CRISPR spacer
accagcagcaacaccaaaagca	Protospacer
************.**** ****

5. spacer 6.3|1953828|22|NZ_LR698998|CRISPRCasFinder matches to position: 3115811-3115832, mismatch: 2, identity: 0.909

accagcagcaacgccaacagca	CRISPR spacer
accaacagcaacaccaacagca	Protospacer
****.*******.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR698998_6	6.3\|1953828\|22\|NZ_LR698998\|CRISPRCasFinder	1953828-1953849	22	NZ_CP025584	Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence	94597-94618	2	0.909
NZ_LR698998_6	6.3\|1953828\|22\|NZ_LR698998\|CRISPRCasFinder	1953828-1953849	22	MG592580	Vibrio phage 1.210.O._10N.222.52.C2, partial genome	28917-28938	2	0.909
NZ_LR698998_15	15.1\|5749258\|27\|NZ_LR698998\|CRISPRCasFinder	5749258-5749284	27	NZ_CP040048	Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence	55199-55225	4	0.852
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	KT281796	Mycobacterium phage Zakhe101, complete genome	59621-59648	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	AY129335	Mycobacterium virus Corndog, complete genome	59148-59175	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MN428058	Mycobacterium phage Krili, complete genome	59971-59998	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	NC_004685	Mycobacterium phage Corndog, complete genome	59148-59175	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	JN698993	Mycobacterium phage Firecracker, complete genome	61255-61282	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MG872838	Mycobacterium phage JangDynasty, complete genome	59662-59689	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	KJ829260	Mycobacterium phage YungJamal, complete genome	59921-59948	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	NC_022057	Mycobacterium phage Catdawg, complete genome	60462-60489	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MT818425	Mycobacterium phage NiebruSaylor, complete genome	59893-59920	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	NC_022325	Mycobacterium phage Dylan, complete genome	59617-59644	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MN428052	Mycobacterium phage Smooch, complete genome	61097-61124	5	0.821
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MH020246	Mycobacterium phage SchoolBus, complete genome	59582-59609	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MT818418	Mycobacterium phage Shida, complete genome	60083-60110	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MH926062	Mycobacterium phage Vorrps, complete genome	60500-60527	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MG099943	Mycobacterium phage Familton, complete genome	59865-59892	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MH590592	Mycobacterium phage Ryadel, complete genome	60473-60500	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	MN585964	Mycobacterium phage Blessica, complete genome	60172-60199	6	0.786
NZ_LR698998_5	5.1\|1208910\|28\|NZ_LR698998\|CRISPRCasFinder	1208910-1208937	28	NZ_CP040764	Paracoccus sp. 2251 plasmid unnamed3, complete sequence	143603-143630	7	0.75
NZ_LR698998_14	14.1\|5348628\|29\|NZ_LR698998\|CRISPRCasFinder	5348628-5348656	29	MG592529	Vibrio phage 1.161.O._10N.261.48.C5, partial genome	16781-16809	7	0.759
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP044030	Klebsiella pneumoniae strain RJY9645 plasmid pY9645-105, complete sequence	76018-76047	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP036373	Klebsiella pneumoniae strain WCHKP020037 plasmid p1_020037, complete sequence	411-440	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP008931	Klebsiella pneumoniae strain PMK1 plasmid pPMK1-B, complete sequence	80062-80091	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052264	Klebsiella pneumoniae strain E16KP0288 plasmid pE16K0288-2, complete sequence	318-347	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP026134	Klebsiella pneumoniae strain F5 plasmid pF5_2, complete sequence	81265-81294	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP022128	Klebsiella pneumoniae strain DHQP1605752_NV plasmid p1605752FIB_2, complete sequence	35821-35850	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP050365	Klebsiella pneumoniae strain 47733 plasmid p47733_IncFIB, complete sequence	63938-63967	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP030268	Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-IncFIB-110K, complete sequence	68850-68879	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP026146	Klebsiella pneumoniae strain F132 plasmid pF132_1, complete sequence	92168-92197	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP026150	Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence	75228-75257	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP045677	Klebsiella pneumoniae strain WSD411 plasmid pWSD411_4, complete sequence	1579-1608	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP026138	Klebsiella pneumoniae strain F77 plasmid pF77_2, complete sequence	51315-51344	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP028544	Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid p2_020143, complete sequence	1558-1587	8	0.733
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP023984	Klebsiella variicola strain X39 plasmid pX39-7, complete sequence	78955-78984	8	0.733
NZ_LR698998_14	14.1\|5348628\|29\|NZ_LR698998\|CRISPRCasFinder	5348628-5348656	29	NC_007021	Staphylococcus phage Twort, complete genome	47187-47215	8	0.724
NZ_LR698998_14	14.1\|5348628\|29\|NZ_LR698998\|CRISPRCasFinder	5348628-5348656	29	MT151386	Staphylococcus virus Twort, complete genome	89716-89744	8	0.724
NZ_LR698998_21	21.1\|6738333\|42\|NZ_LR698998\|CRISPRCasFinder	6738333-6738374	42	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	248082-248123	8	0.81
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP012427	Klebsiella pneumoniae strain KP5 plasmid pSg1-1, complete sequence	60836-60865	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP017387	Klebsiella pneumoniae strain KP36 plasmid 2, complete sequence	224036-224065	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP044034	Klebsiella pneumoniae strain FDAARGOS_631 plasmid unnamed2, complete sequence	3078-3107	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052311	Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-2, complete sequence	76434-76463	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP041929	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374B, complete sequence	7943-7972	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP021962	Klebsiella pneumoniae strain AR_0139 plasmid tig00000008, complete sequence	1786-1815	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP036194	Klebsiella pneumoniae strain BA34918 plasmid pIncFIB, complete sequence	41743-41772	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052281	Klebsiella pneumoniae strain E16KP0224 plasmid pE16KP0224-1, complete sequence	83515-83544	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052423	Klebsiella pneumoniae strain C16KP0164 plasmid pC16KP0164-1, complete sequence	114781-114810	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP021714	Klebsiella pneumoniae strain AR_0129 plasmid tig00000001, complete sequence	83743-83772	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP015755	Klebsiella pneumoniae strain W14 plasmid unnamed2, complete sequence	103209-103238	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP016924	Klebsiella pneumoniae isolate 23 plasmid pIncFIB_DHQP1400954, complete sequence	61765-61794	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP032187	Klebsiella pneumoniae strain AR_0075 plasmid unnamed2, complete sequence	32682-32711	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052352	Klebsiella pneumoniae strain D16KP0146 plasmid pD17KP0032-1, complete sequence	127651-127680	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP016161	Klebsiella pneumoniae strain TH1 isolate TH1 plasmid unnamed2, complete sequence	6551-6580	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP050276	Klebsiella pneumoniae strain 10553 plasmid unnamed1, complete sequence	26718-26747	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP058330	Klebsiella phage vB_Kpn_1825-KPC53 chromosome phage_vB_Kpn_1825-KPC53, complete sequence	54485-54514	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP028550	Klebsiella variicola strain WCHKP19 plasmid p2_020019, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_MF133442	Klebsiella pneumoniae strain 11219 plasmid p11219-CTXM, complete sequence	1699-1728	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052409	Klebsiella pneumoniae strain C17KP0008 plasmid pC17KP0008-2, complete sequence	1609-1638	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP025467	Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence	135722-135751	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052220	Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-3, complete sequence	49338-49367	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052416	Klebsiella pneumoniae strain C16KP0189 plasmid pC16KP0189-2, complete sequence	1588-1617	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP024877	Klebsiella pneumoniae strain NH25 plasmid pNH25.3, complete sequence	60232-60261	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP012570	Klebsiella pneumoniae strain UCLAOXA232KP plasmid pUCLAOXA232-4.X, complete sequence	1699-1728	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP031791	Klebsiella pneumoniae strain KSB1_1I-sc-2280289 plasmid unnamed2, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052552	Klebsiella pneumoniae strain A17KP0038 plasmid pA17KP0038-1, complete sequence	1609-1638	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP031803	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed3, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP040026	Klebsiella pneumoniae strain KPC160132 plasmid pIncFI-L132, complete sequence	20070-20099	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP028997	Klebsiella pneumoniae strain AR_0079 plasmid unnamed4, complete sequence	91278-91307	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP027045	Klebsiella pneumoniae strain 1_GR_13 plasmid IncFIB, complete sequence	27863-27892	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP012565	Klebsiella pneumoniae strain UCLAOXA232KP plasmid pUCLAOXA232-4, complete sequence	1699-1728	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP035909	Klebsiella pneumoniae strain BA4656 plasmid unnamed2, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP024460	Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence	20857-20886	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP026165	Klebsiella pneumoniae strain F81 plasmid pF81_1, complete sequence	35088-35117	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052390	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-2, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP040597	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed3, complete sequence	2515-2544	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NC_016838	Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1, complete sequence	1899-1928	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP034055	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed2, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052393	Klebsiella pneumoniae strain C17KP0040 plasmid pC17KP0040-1, complete sequence	73427-73456	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP044370	Klebsiella pneumoniae strain 2018C01-046 plasmid p2018C01-046-2, complete sequence	38530-38559	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP034047	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed2, complete sequence	1579-1608	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP052470	Klebsiella pneumoniae strain C16KP0053 plasmid pC16KP0053-2, complete sequence	1588-1617	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP044046	Klebsiella pneumoniae strain FDAARGOS_629 plasmid unnamed4, complete sequence	58998-59027	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	CP050287	Klebsiella pneumoniae strain 9630 plasmid unnamed2, complete sequence	113909-113938	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_CP032225	Klebsiella pneumoniae strain AR_0046 plasmid unnamed3, complete sequence	25702-25731	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	NZ_KY354306	Klebsiella pneumoniae strain 301 plasmid pKP301b, complete sequence	51603-51632	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	LR134218	Klebsiella aerogenes strain NCTC10317 genome assembly, plasmid: 2	36672-36701	9	0.7
NZ_LR698998_3	3.1\|1093128\|30\|NZ_LR698998\|CRISPRCasFinder	1093128-1093157	30	MK422451	Klebsiella phage ST13-OXA48phi12.3, complete genome	70224-70253	9	0.7

1. spacer 6.3|1953828|22|NZ_LR698998|CRISPRCasFinder matches to NZ_CP025584 (Paracoccus jeotgali strain CBA4604 plasmid pCBA4604-01, complete sequence) position: , mismatch: 2, identity: 0.909

accagcagcaacgccaacagca	CRISPR spacer
cccagcaacaacgccaacagca	Protospacer
 ******.**************

2. spacer 6.3|1953828|22|NZ_LR698998|CRISPRCasFinder matches to MG592580 (Vibrio phage 1.210.O._10N.222.52.C2, partial genome) position: , mismatch: 2, identity: 0.909

accagcagcaacgccaacagca	CRISPR spacer
gccagcagcaacgccaccagca	Protospacer
.*************** *****

3. spacer 15.1|5749258|27|NZ_LR698998|CRISPRCasFinder matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

atagaaatccttataagatgggtaaca	CRISPR spacer
ataaaaatcctgataagatgggtagcg	Protospacer
***.******* ************.*.

4. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to KT281796 (Mycobacterium phage Zakhe101, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

5. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to AY129335 (Mycobacterium virus Corndog, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

6. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MN428058 (Mycobacterium phage Krili, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

7. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to NC_004685 (Mycobacterium phage Corndog, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

8. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to JN698993 (Mycobacterium phage Firecracker, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

9. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MG872838 (Mycobacterium phage JangDynasty, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

10. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to KJ829260 (Mycobacterium phage YungJamal, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

11. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to NC_022057 (Mycobacterium phage Catdawg, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

12. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MT818425 (Mycobacterium phage NiebruSaylor, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

13. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to NC_022325 (Mycobacterium phage Dylan, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

14. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MN428052 (Mycobacterium phage Smooch, complete genome) position: , mismatch: 5, identity: 0.821

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcgtactcacc	Protospacer
.  ***** ***************** *

15. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MH020246 (Mycobacterium phage SchoolBus, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

16. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MT818418 (Mycobacterium phage Shida, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

17. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MH926062 (Mycobacterium phage Vorrps, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

18. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MG099943 (Mycobacterium phage Familton, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

19. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MH590592 (Mycobacterium phage Ryadel, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

20. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to MN585964 (Mycobacterium phage Blessica, complete genome) position: , mismatch: 6, identity: 0.786

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
cgatccggcagaagatcgcatactcacc	Protospacer
.  ***** **********.****** *

21. spacer 5.1|1208910|28|NZ_LR698998|CRISPRCasFinder matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.75

tcctccggaagaagatcgcgtactcaac	CRISPR spacer
ccagccggaagaagatcgcgtattccga	Protospacer
.*  ******************.** .

22. spacer 14.1|5348628|29|NZ_LR698998|CRISPRCasFinder matches to MG592529 (Vibrio phage 1.161.O._10N.261.48.C5, partial genome) position: , mismatch: 7, identity: 0.759

acgctttgttttgtaagcataagctgctt	CRISPR spacer
ctgctttgatttgtaagtataagctgagg	Protospacer
 .****** ********.********

23. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP044030 (Klebsiella pneumoniae strain RJY9645 plasmid pY9645-105, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

24. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP036373 (Klebsiella pneumoniae strain WCHKP020037 plasmid p1_020037, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

25. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP008931 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-B, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

26. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052264 (Klebsiella pneumoniae strain E16KP0288 plasmid pE16K0288-2, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

27. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP026134 (Klebsiella pneumoniae strain F5 plasmid pF5_2, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

28. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP022128 (Klebsiella pneumoniae strain DHQP1605752_NV plasmid p1605752FIB_2, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

29. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP050365 (Klebsiella pneumoniae strain 47733 plasmid p47733_IncFIB, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

30. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP030268 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-IncFIB-110K, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

31. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP026146 (Klebsiella pneumoniae strain F132 plasmid pF132_1, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

32. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP026150 (Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

33. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP045677 (Klebsiella pneumoniae strain WSD411 plasmid pWSD411_4, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

34. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP026138 (Klebsiella pneumoniae strain F77 plasmid pF77_2, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

35. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP028544 (Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid p2_020143, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

36. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP023984 (Klebsiella variicola strain X39 plasmid pX39-7, complete sequence) position: , mismatch: 8, identity: 0.733

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccag	Protospacer
. ****.********* ********. .*

37. spacer 14.1|5348628|29|NZ_LR698998|CRISPRCasFinder matches to NC_007021 (Staphylococcus phage Twort, complete genome) position: , mismatch: 8, identity: 0.724

acgctttgttttgtaagcataagctgctt	CRISPR spacer
cagctatgttttgtaagcataagtttgaa	Protospacer
  *** *****************.*

38. spacer 14.1|5348628|29|NZ_LR698998|CRISPRCasFinder matches to MT151386 (Staphylococcus virus Twort, complete genome) position: , mismatch: 8, identity: 0.724

acgctttgttttgtaagcataagctgctt	CRISPR spacer
cagctatgttttgtaagcataagtttgaa	Protospacer
  *** *****************.*

39. spacer 21.1|6738333|42|NZ_LR698998|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 8, identity: 0.81

ttggtgtcggtgtcggtgccgatgttggtgtcggtgttggtg	CRISPR spacer
ccggtgtcggtgtcggtgccggtgtcggtgtcggtgcccgta	Protospacer
..*******************.***.**********.. **.

40. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP012427 (Klebsiella pneumoniae strain KP5 plasmid pSg1-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

41. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP017387 (Klebsiella pneumoniae strain KP36 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

42. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP044034 (Klebsiella pneumoniae strain FDAARGOS_631 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

43. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052311 (Klebsiella pneumoniae strain E16KP0102 plasmid pE16KP0102-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

44. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP041929 (Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374B, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

45. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP021962 (Klebsiella pneumoniae strain AR_0139 plasmid tig00000008, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

46. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP036194 (Klebsiella pneumoniae strain BA34918 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttccctg	Protospacer
. ****.********* ********. .

47. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052281 (Klebsiella pneumoniae strain E16KP0224 plasmid pE16KP0224-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

48. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052423 (Klebsiella pneumoniae strain C16KP0164 plasmid pC16KP0164-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

49. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP021714 (Klebsiella pneumoniae strain AR_0129 plasmid tig00000001, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

50. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP015755 (Klebsiella pneumoniae strain W14 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

51. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP016924 (Klebsiella pneumoniae isolate 23 plasmid pIncFIB_DHQP1400954, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

52. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP032187 (Klebsiella pneumoniae strain AR_0075 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

53. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052352 (Klebsiella pneumoniae strain D16KP0146 plasmid pD17KP0032-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

54. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP016161 (Klebsiella pneumoniae strain TH1 isolate TH1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

55. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP050276 (Klebsiella pneumoniae strain 10553 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

56. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP058330 (Klebsiella phage vB_Kpn_1825-KPC53 chromosome phage_vB_Kpn_1825-KPC53, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

57. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP028550 (Klebsiella variicola strain WCHKP19 plasmid p2_020019, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

58. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_MF133442 (Klebsiella pneumoniae strain 11219 plasmid p11219-CTXM, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

59. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052409 (Klebsiella pneumoniae strain C17KP0008 plasmid pC17KP0008-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

60. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP025467 (Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

61. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052220 (Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-3, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttccctg	Protospacer
. ****.********* ********. .

62. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052416 (Klebsiella pneumoniae strain C16KP0189 plasmid pC16KP0189-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

63. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP024877 (Klebsiella pneumoniae strain NH25 plasmid pNH25.3, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

64. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP012570 (Klebsiella pneumoniae strain UCLAOXA232KP plasmid pUCLAOXA232-4.X, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

65. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP031791 (Klebsiella pneumoniae strain KSB1_1I-sc-2280289 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

66. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052552 (Klebsiella pneumoniae strain A17KP0038 plasmid pA17KP0038-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

67. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP031803 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

68. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP040026 (Klebsiella pneumoniae strain KPC160132 plasmid pIncFI-L132, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

69. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP028997 (Klebsiella pneumoniae strain AR_0079 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

70. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP027045 (Klebsiella pneumoniae strain 1_GR_13 plasmid IncFIB, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

71. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP012565 (Klebsiella pneumoniae strain UCLAOXA232KP plasmid pUCLAOXA232-4, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

72. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP035909 (Klebsiella pneumoniae strain BA4656 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttccctg	Protospacer
. ****.********* ********. .

73. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP024460 (Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttccctg	Protospacer
. ****.********* ********. .

74. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP026165 (Klebsiella pneumoniae strain F81 plasmid pF81_1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

75. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052390 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

76. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP040597 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

77. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NC_016838 (Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

78. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP034055 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

79. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052393 (Klebsiella pneumoniae strain C17KP0040 plasmid pC17KP0040-1, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

80. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP044370 (Klebsiella pneumoniae strain 2018C01-046 plasmid p2018C01-046-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

81. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP034047 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

82. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP052470 (Klebsiella pneumoniae strain C16KP0053 plasmid pC16KP0053-2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

83. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP044046 (Klebsiella pneumoniae strain FDAARGOS_629 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

84. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to CP050287 (Klebsiella pneumoniae strain 9630 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

85. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_CP032225 (Klebsiella pneumoniae strain AR_0046 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

86. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to NZ_KY354306 (Klebsiella pneumoniae strain 301 plasmid pKP301b, complete sequence) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

87. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to LR134218 (Klebsiella aerogenes strain NCTC10317 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

88. spacer 3.1|1093128|30|NZ_LR698998|CRISPRCasFinder matches to MK422451 (Klebsiella phage ST13-OXA48phi12.3, complete genome) position: , mismatch: 9, identity: 0.7

aagtttatgctttcgaagtgagttttgtac	CRISPR spacer
gcgtttgtgctttcgatgtgagtttcccgg	Protospacer
. ****.********* ********. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

378372 : 385416

Paramecium_bursaria_Chlorella_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076134800.1\|378372_379401_+	agmatine deiminase family protein	M1I7C5	Paramecium_bursaria_Chlorella_virus	3.9e-66	37.1
WP_076107380.1\|379455_380331_+	N-carbamoylputrescine amidase	M1GUG4	Paramecium_bursaria_Chlorella_virus	1.1e-72	47.4
WP_111502320.1\|380556_381372_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_076124698.1\|381465_382116_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_076134896.1\|382126_382849_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.9e-33	40.5
WP_076134801.1\|383005_383452_+	tellurite resistance TerB family protein	A0A1Y0T181	Sinorhizobium_phage	6.1e-08	30.0
WP_076134802.1\|383575_384172_+	TerD family protein	K4JRX3	Caulobacter_phage	2.4e-23	34.2
WP_076134803.1\|384201_384777_+	TerD family protein	NA	NA	NA	NA
WP_076134804.1\|384834_385416_+	TerD family protein	K4JRX3	Caulobacter_phage	9.1e-28	37.5

DBSCAN-SWA_2

757564 : 768852

Synechococcus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076136915.1\|757564_758860_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.9e-23	27.4
WP_076136913.1\|759178_760069_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.6e-39	33.4
WP_036680912.1\|760193_760439_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	3.7e-07	36.7
WP_036680909.1\|760444_761134_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_038568661.1\|761111_763358_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	2.3e-167	42.4
WP_036680905.1\|763342_764839_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-49	32.6
WP_076136912.1\|765440_766481_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.0e-66	44.2
WP_111502500.1\|766480_767098_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.2e-25	38.1
WP_036680898.1\|767304_768852_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.8e-76	52.0

DBSCAN-SWA_3

2173776 : 2183890

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111503269.1\|2173776_2175573_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.6e-38	31.9
WP_036678951.1\|2175682_2176411_+	response regulator transcription factor	W8CYM9	Bacillus_phage	5.1e-36	33.9
WP_111503271.1\|2176609_2177365_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.1e-16	32.9
WP_111503273.1\|2177438_2178098_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_076133968.1\|2178287_2180957_+	DNA polymerase I	A0A218MKQ4	uncultured_virus	3.4e-61	30.3
WP_076133969.1\|2181009_2181846_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	1.0e-19	30.3
WP_076133970.1\|2181977_2182724_+	manganese efflux pump	NA	NA	NA	NA
WP_076133971.1\|2182733_2183330_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_036678971.1\|2183326_2183890_+	lytic transglycosylase domain-containing protein	K4NWI2	Pseudomonas_phage	5.0e-15	40.9

DBSCAN-SWA_4

3670229 : 3678015

Streptococcus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111504290.1\|3670229_3671366_-	glutathione-dependent formaldehyde dehydrogenase	M1PHA2	Moumouvirus	5.7e-10	28.6
WP_111506297.1\|3671447_3672245_-	VanW family protein	NA	NA	NA	NA
WP_076138736.1\|3672266_3672788_-	cysteine hydrolase	NA	NA	NA	NA
WP_111504292.1\|3672923_3673646_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.7e-63	49.4
WP_111504294.1\|3673638_3674121_-	6-carboxytetrahydropterin synthase	A0A1U9WRB3	Streptococcus_virus	4.1e-26	50.7
WP_076138738.1\|3674120_3674783_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	8.4e-62	53.7
WP_076106775.1\|3674812_3675313_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.9e-51	68.6
WP_036687547.1\|3675752_3676088_+	hypothetical protein	NA	NA	NA	NA
WP_076138739.1\|3676152_3677064_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_036687549.1\|3677214_3678015_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-14	27.5

DBSCAN-SWA_5

4674357 : 4684485

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172628841.1\|4674357_4675557_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	9.7e-08	34.0
WP_076134709.1\|4675807_4676296_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_076134710.1\|4676385_4677093_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_036676149.1\|4677274_4677877_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.1e-15	31.9
WP_036676147.1\|4677845_4678637_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.9e-08	36.8
WP_036676377.1\|4678773_4679241_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.6e-43	58.0
WP_076127453.1\|4679277_4680531_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.8e-116	53.2
WP_076134711.1\|4680593_4681262_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.7e-36	39.8
WP_111504891.1\|4681316_4682417_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.3e-55	36.4
WP_111504893.1\|4682998_4683394_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_076134713.1\|4683774_4684485_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.7e-41	38.7

DBSCAN-SWA_6

5054331 : 5077677

Anoxybacillus_phage(33.33%)

holin,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111505131.1\|5054331_5054790_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_111505133.1\|5054807_5055020_-	hypothetical protein	NA	NA	NA	NA
WP_111505135.1\|5055124_5055511_-	hypothetical protein	NA	NA	NA	NA
WP_076281276.1\|5055943_5056537_-	hypothetical protein	NA	NA	NA	NA
WP_076281275.1\|5056537_5057071_-	hypothetical protein	NA	NA	NA	NA
WP_111506375.1\|5057137_5059324_-\|tail	phage tail protein	A0A2P1JTV8	Anoxybacillus_phage	1.3e-15	24.1
WP_111505137.1\|5059367_5059886_-\|tail	phage tail family protein	NA	NA	NA	NA
WP_162636801.1\|5059971_5060115_-	hypothetical protein	NA	NA	NA	NA
WP_111505139.1\|5060183_5060756_-	hypothetical protein	NA	NA	NA	NA
WP_111505141.1\|5060769_5063541_-	hypothetical protein	R4JDZ8	Bacillus_phage	7.9e-21	35.6
WP_111506377.1\|5063570_5063966_-	hypothetical protein	H6BJ44	Methylophilales_phage	6.6e-22	43.1
WP_111505143.1\|5063984_5064536_-\|tail	phage tail family protein	NA	NA	NA	NA
WP_111505145.1\|5064536_5069885_-	transglycosylase	NA	NA	NA	NA
WP_111505147.1\|5070256_5070577_-	hypothetical protein	NA	NA	NA	NA
WP_076208558.1\|5070625_5071408_-	hypothetical protein	NA	NA	NA	NA
WP_111505149.1\|5071437_5071623_-	hypothetical protein	NA	NA	NA	NA
WP_076208560.1\|5071634_5072066_-	hypothetical protein	NA	NA	NA	NA
WP_111505151.1\|5072062_5072641_-	hypothetical protein	NA	NA	NA	NA
WP_172628848.1\|5072637_5072967_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_172628849.1\|5073053_5073233_+	hypothetical protein	NA	NA	NA	NA
WP_111505155.1\|5073221_5073785_-	hypothetical protein	NA	NA	NA	NA
WP_111505157.1\|5073781_5074078_-	hypothetical protein	NA	NA	NA	NA
WP_111505159.1\|5074136_5075138_-	hypothetical protein	NA	NA	NA	NA
WP_111505161.1\|5075141_5076185_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_111505163.1\|5076339_5077677_-\|portal	phage portal protein	NA	NA	NA	NA

DBSCAN-SWA_7

5089945 : 5103309

Paenibacillus_phage(36.36%)

integrase

attL 5099815:5099828|attR 5109715:5109728

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111505195.1\|5089945_5090803_-	DNA (cytosine-5-)-methyltransferase	F2Y148	Organic_Lake_phycodnavirus	1.5e-18	26.1
WP_111505197.1\|5090929_5091121_+	hypothetical protein	NA	NA	NA	NA
WP_111505199.1\|5091208_5091409_+	hypothetical protein	NA	NA	NA	NA
WP_111505201.1\|5091448_5091652_-	hypothetical protein	NA	NA	NA	NA
WP_111505203.1\|5091648_5092215_-	hypothetical protein	NA	NA	NA	NA
WP_111505205.1\|5092375_5092564_-	hypothetical protein	NA	NA	NA	NA
WP_111505207.1\|5092703_5093048_+	lectin	NA	NA	NA	NA
WP_162636806.1\|5093163_5093757_-	sigma-70 family RNA polymerase sigma factor	U5Q0I1	Bacillus_phage	2.1e-08	24.6
WP_111505211.1\|5093767_5094439_-	HNH endonuclease	D0R7I8	Paenibacillus_phage	1.4e-56	64.8
WP_162636808.1\|5094516_5094672_-	hypothetical protein	NA	NA	NA	NA
WP_076207093.1\|5094872_5095079_+	helix-turn-helix transcriptional regulator	D0R7I7	Paenibacillus_phage	1.3e-10	78.0
WP_111505213.1\|5095084_5095270_-	hypothetical protein	NA	NA	NA	NA
WP_111505215.1\|5095360_5096488_-	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	3.8e-38	48.4
WP_111505217.1\|5096493_5097438_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	4.8e-63	46.0
WP_111505219.1\|5097438_5098509_-	replication protein	S5M5Q5	Brevibacillus_phage	2.2e-43	34.7
WP_111505221.1\|5098509_5098791_-	hypothetical protein	NA	NA	NA	NA
WP_076207105.1\|5098787_5099201_-	ORF6C domain-containing protein	A0A220GJF4	Streptococcus_phage	3.4e-05	24.8
WP_111505223.1\|5099200_5100319_-	ParB N-terminal domain-containing protein	A0A1D6Z271	Staphylococcus_phage	5.8e-39	44.1
5099815:5099828	attL	NA	NA	NA	NA
WP_076207109.1\|5100363_5100672_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_076207111.1\|5100710_5100917_-	helix-turn-helix transcriptional regulator	M9Q2L3	Clostridium_phage	1.1e-09	50.0
WP_076281238.1\|5101114_5101534_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_076207115.1\|5101543_5101954_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_162636810.1\|5102028_5103309_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CZ62	Paenibacillus_phage	5.9e-112	50.2
5109715:5109728	attR	NA	NA	NA	NA

DBSCAN-SWA_8

5340111 : 5351164

Hokovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036677635.1\|5340111_5341365_-\|tRNA	histidine--tRNA ligase	A0A1V0SFH3	Hokovirus	1.0e-15	24.7
WP_172628854.1\|5341557_5341695_-	hypothetical protein	NA	NA	NA	NA
WP_036677637.1\|5342062_5342512_-	hypothetical protein	NA	NA	NA	NA
WP_076105448.1\|5342560_5343070_-	type 1 glutamine amidotransferase	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	5.3e-24	42.5
WP_162636812.1\|5343220_5343376_-	hypothetical protein	NA	NA	NA	NA
WP_036677641.1\|5343509_5343953_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_036677643.1\|5343974_5346155_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	2.2e-10	40.0
WP_038572987.1\|5346468_5347782_+	uracil permease	Q9KX94	Enterobacteria_phage	1.3e-69	38.3
WP_036677647.1\|5348033_5348552_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-27	43.7
WP_076137426.1\|5348761_5351164_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.0e-80	33.3

DBSCAN-SWA_9

6032839 : 6105960

Clostridium_phage(24.0%)

plate,tail,holin,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147614470.1\|6032839_6033649_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_162636849.1\|6035977_6036511_-	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_036681391.1\|6036527_6036851_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_162636851.1\|6036988_6037159_+	hypothetical protein	NA	NA	NA	NA
WP_076137072.1\|6037244_6038243_-	globin-coupled sensor protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-09	32.9
WP_111505647.1\|6038464_6038794_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_076128794.1\|6038899_6039220_-	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_076137106.1\|6039294_6040323_-	cation transporter	NA	NA	NA	NA
WP_111505649.1\|6040556_6047414_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_076138383.1\|6047715_6048432_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_076129804.1\|6048548_6049370_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.5e-09	34.6
WP_076138382.1\|6049627_6051157_-	alkyl hydroperoxide reductase subunit F	G3MA85	Bacillus_virus	8.2e-36	30.1
WP_076138381.1\|6051171_6051735_-	peroxiredoxin	NA	NA	NA	NA
WP_111505651.1\|6052094_6055646_-	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_076138380.1\|6055900_6056887_-	phosphotransferase	NA	NA	NA	NA
WP_076208629.1\|6056972_6058715_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_111505653.1\|6058998_6061050_-	beta-galactosidase	NA	NA	NA	NA
WP_111505655.1\|6061220_6062054_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_111505657.1\|6062120_6062621_-	hypothetical protein	NA	NA	NA	NA
WP_111505659.1\|6062661_6063525_-	hypothetical protein	NA	NA	NA	NA
WP_076138389.1\|6063549_6064071_-	AAA family ATPase	A0A286MQI3	Mycobacterium_phage	5.1e-06	33.6
WP_162636853.1\|6064087_6065062_-	phosphotransferase	NA	NA	NA	NA
WP_036681355.1\|6065311_6065683_-	iron chaperone	NA	NA	NA	NA
WP_076129794.1\|6065741_6066176_-	hypothetical protein	NA	NA	NA	NA
WP_036681352.1\|6066159_6066378_-	helix-turn-helix transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	6.9e-05	38.5
WP_111505663.1\|6066900_6067389_-	DUF2199 domain-containing protein	NA	NA	NA	NA
WP_111505665.1\|6067624_6068827_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_111505667.1\|6069003_6069408_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_162636855.1\|6069831_6070626_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_111505671.1\|6070662_6071532_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_076208469.1\|6072006_6073839_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HMK6	Paramecium_bursaria_Chlorella_virus	1.1e-111	40.4
WP_076129780.1\|6074479_6075820_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_111505673.1\|6075908_6077369_-	hypothetical protein	NA	NA	NA	NA
WP_036681290.1\|6077361_6078192_-	TIGR00159 family protein	NA	NA	NA	NA
WP_036681404.1\|6078406_6079021_-	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_036681288.1\|6079142_6079709_-	RNA polymerase sigma factor SigW	NA	NA	NA	NA
WP_038573414.1\|6080222_6083015_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_111505675.1\|6083249_6084143_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_076099886.1\|6084308_6085277_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.0e-19	29.9
WP_111506429.1\|6085367_6086447_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_111505677.1\|6086452_6088132_+	iron ABC transporter permease	NA	NA	NA	NA
WP_111505679.1\|6088128_6089439_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_076099882.1\|6089543_6089825_-\|holin	holin	A0A0U4JE55	Bacillus_phage	1.3e-16	47.7
WP_111505681.1\|6089837_6090530_-	M15 family metallopeptidase	A0A127AWA8	Bacillus_phage	1.2e-42	55.3
WP_076208477.1\|6090530_6090935_-	hypothetical protein	NA	NA	NA	NA
WP_076274758.1\|6091008_6091140_-	XkdX family protein	NA	NA	NA	NA
WP_111505683.1\|6091603_6093217_-	hypothetical protein	S6B1J7	Thermus_phage	4.2e-30	32.5
WP_111505685.1\|6093228_6093840_-	DUF2313 domain-containing protein	S6BFJ0	Thermus_phage	5.0e-53	54.9
WP_111505687.1\|6093843_6094179_-\|tail	phage tail protein	A0A0A7S181	Clostridium_phage	9.6e-06	65.7
WP_038573428.1\|6094190_6095213_-	DUF2793 domain-containing protein	A0A0S0MV96	Pseudomonas_phage	3.8e-13	36.8
WP_111505689.1\|6095214_6095628_-	phosphoglucomutase	A0A0A7S1G0	Clostridium_phage	5.3e-30	51.2
WP_111505691.1\|6095629_6096688_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	4.4e-97	53.7
WP_076208484.1\|6096680_6097112_-	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	3.8e-23	40.0
WP_076138387.1\|6097108_6097405_-	DUF2577 domain-containing protein	A0A0A7RTJ2	Clostridium_phage	4.5e-15	39.4
WP_111505693.1\|6097410_6098373_-	hypothetical protein	A0A0K2CNH3	Brevibacillus_phage	9.9e-88	48.8
WP_111505695.1\|6098382_6099135_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	8.1e-45	39.0
WP_111505697.1\|6099136_6101083_-	hypothetical protein	A0A0K2CP22	Brevibacillus_phage	1.9e-29	26.0
WP_076129761.1\|6101277_6101700_-\|portal	phage portal protein	A0A0A8WJT4	Clostridium_phage	1.3e-23	42.5
WP_036681245.1\|6101826_6102297_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	4.4e-49	61.6
WP_111505699.1\|6102298_6103621_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	5.9e-107	47.6
WP_111505701.1\|6103620_6103800_-	hypothetical protein	NA	NA	NA	NA
WP_076307211.1\|6103796_6104210_-	hypothetical protein	NA	NA	NA	NA
WP_076138386.1\|6104742_6105240_-	transcriptional regulator	A0A0C5AJ96	Bacteriophage	1.6e-41	64.2
WP_076129758.1\|6105528_6105960_+	transcriptional regulator	S6C481	Thermus_phage	7.2e-22	42.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR698998

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection