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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LR735429 Staphylococcus epidermidis strain none isolate Se_BPH0704 chromosome 1 4 crisprs cas1,cas2,csa3,WYL,DEDDh,cas3,DinG 0 16 6 0
NZ_LR735430 Staphylococcus epidermidis strain none isolate Se_BPH0704 plasmid 2 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_LR735429
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR735429_1 69068-70157 TypeII NA
16 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR735429_2 987389-987531 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR735429_3 1671175-1671260 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR735429_4 2267543-2267631 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LR735429_1 1.1|69104|29|NZ_LR735429|CRISPRCasFinder,CRT 69104-69132 29 NZ_CP031197 Staphylococcus saprophyticus strain 1A plasmid unnamed1 25560-25588 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 NZ_CP031197 Staphylococcus saprophyticus strain 1A plasmid unnamed1 12914-12943 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417899 Uncultured Caudovirales phage clone 7S_8, partial genome 39618-39647 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417901 Uncultured Caudovirales phage clone 9S_1, partial genome 7059-7088 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 KY653117 Staphylococcus phage IME1323_01, complete genome 16472-16501 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417983 Uncultured Caudovirales phage clone 10S_3, partial genome 1489-1518 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417900 Uncultured Caudovirales phage clone 8AX_1, partial genome 2326-2355 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417895 Uncultured Caudovirales phage clone 10AX_1, partial genome 42157-42186 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417909 Uncultured Caudovirales phage clone 10F_7, partial genome 33180-33209 0 1.0
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 JN192400 Staphylococcus phage vB_SepiS-phiIPLA5, complete genome 6750-6779 0 1.0
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 KY653120 Staphylococcus phage IME1348_01, complete genome 14430-14459 1 0.967
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 NC_008723 Staphylococcus phage PH15, complete genome 42938-42967 1 0.967
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 NC_019914 Staphylococcus phage StB27, complete genome 13499-13528 1 0.967
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 NC_028821 Staphylococcus phage StB20-like, complete genome 25291-25320 1 0.967
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KY653120 Staphylococcus phage IME1348_01, complete genome 22405-22434 1 0.967
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KU598975 Staphylococcus phage CNPx, complete genome 6804-6833 1 0.967
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 JN192401 Staphylococcus phage vB_SepiS-phiIPLA7, complete genome 6349-6378 1 0.967
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_008723 Staphylococcus phage PH15, complete genome 7452-7481 1 0.967
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 DQ831957 Staphylococcus phage CNPH82, complete genome 6804-6833 1 0.967
NZ_LR735429_1 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69432-69461 30 MF417888 Uncultured Caudovirales phage clone 9S_3, partial genome 21315-21344 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 KY653120 Staphylococcus phage IME1348_01, complete genome 35316-35345 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 JN192400 Staphylococcus phage vB_SepiS-phiIPLA5, complete genome 19662-19691 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 KU598975 Staphylococcus phage CNPx, complete genome 19716-19745 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 JN192401 Staphylococcus phage vB_SepiS-phiIPLA7, complete genome 19260-19289 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 NC_008723 Staphylococcus phage PH15, complete genome 20363-20392 1 0.967
NZ_LR735429_1 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69498-69527 30 DQ831957 Staphylococcus phage CNPH82, complete genome 19716-19745 1 0.967
NZ_LR735429_1 1.12|69828|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69828-69857 30 NZ_CP031197 Staphylococcus saprophyticus strain 1A plasmid unnamed1 18421-18450 1 0.967
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 AY954962 Bacteriophage 71, complete genome 42271-42300 2 0.933
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 JN192400 Staphylococcus phage vB_SepiS-phiIPLA5, complete genome 42425-42454 2 0.933
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 NC_007059 Staphylococcus phage 71, complete genome 42271-42300 2 0.933
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 JN700521 Staphylococcus phage StB20, complete genome 13293-13322 2 0.933
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MF417972 Uncultured Caudovirales phage clone 10S_4, partial genome 7451-7480 3 0.9
NZ_LR735429_1 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69235-69264 30 MF417976 Uncultured Caudovirales phage clone 3S_5, partial genome 6068-6097 5 0.833
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 AP013490 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C30B-MedDCM-OCT-S46-C80 27027-27056 5 0.833
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 AP013770 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S41-C83, *** SEQUENCING IN PROGRESS *** 30970-30999 5 0.833
NZ_LR735429_1 1.14|69960|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69960-69989 30 NC_014025 Bacillus megaterium QM B1551 plasmid pBM500, complete sequence 17500-17529 5 0.833
NZ_LR735429_1 1.2|69169|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69169-69198 30 NZ_CP023526 Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence 13972-14001 6 0.8
NZ_LR735429_1 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69301-69329 29 NZ_CP050088 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence 181529-181557 6 0.793
NZ_LR735429_1 1.8|69564|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69564-69593 30 MW117966 Synechococcus phage S-H9-1, complete genome 159975-160004 6 0.8
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 AP013655 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S28-C120, *** SEQUENCING IN PROGRESS *** 8142-8171 6 0.8
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 AP013558 Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C24-MedDCM-OCT-S38-C43, *** SEQUENCING IN PROGRESS ***, 8 ordered pieces 17025-17054 6 0.8
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_LR215001 Mycoplasma conjunctivae strain NCTC10147 plasmid 5 6755-6784 6 0.8
NZ_LR735429_1 1.13|69894|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69894-69923 30 NC_002094 Marinococcus halophilus plasmid pPL1, complete sequence 2794-2823 6 0.8
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 AJ560763 Bacteriophage Aaphi23 complete genome 36844-36873 6 0.8
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NC_004827 Bacteriophage Aaphi23, complete genome 36844-36873 6 0.8
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 GQ866233 Aggregatibacter phage S1249, complete sequence 6182-6211 6 0.8
NZ_LR735429_1 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69301-69329 29 NZ_CP053580 Salmonella enterica strain 94-0093 plasmid unnamed, complete sequence 79523-79551 7 0.759
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 AP013634 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S42-C185, *** SEQUENCING IN PROGRESS *** 6869-6898 7 0.767
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 AP013620 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S24-C131, *** SEQUENCING IN PROGRESS *** 11651-11680 7 0.767
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 AP014419 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C120, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces 14291-14320 7 0.767
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 MK448919 Streptococcus phage Javan370, complete genome 32480-32509 7 0.767
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 MK448921 Streptococcus phage Javan374, complete genome 33300-33329 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_KY303941 Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence 12513-12542 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 292018-292047 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MK448952 Streptococcus phage Javan472, complete genome 38308-38337 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP034782 Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence 142173-142202 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP046318 Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence 6166-6195 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP046318 Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence 14044-14073 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP046318 Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence 21921-21950 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NC_025153 Arcobacter butzleri strain AC1119 plasmid AB-1119-LD, complete sequence 19846-19875 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN694470 Marine virus AFVG_250M476, complete genome 26259-26288 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN693658 Marine virus AFVG_250M475, complete genome 26543-26572 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN694582 Marine virus AFVG_250M1184, complete genome 7868-7897 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN693967 Marine virus AFVG_250M992, complete genome 22823-22852 7 0.767
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN694567 Marine virus AFVG_250M1183, complete genome 36960-36989 7 0.767
NZ_LR735429_1 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69762-69791 30 MK376957 Gordonia phage Duffington, complete genome 60960-60989 7 0.767
NZ_LR735429_1 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69762-69791 30 MN204501 Gordonia phage Chikenjars, complete genome 61160-61189 7 0.767
NZ_LR735429_1 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69762-69791 30 MT498052 Gordonia phage Jodelie19, complete genome 61948-61977 7 0.767
NZ_LR735429_1 1.15|70026|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 70026-70055 30 NZ_CP016458 Blastomonas sp. RAC04 plasmid pBSY18_2, complete sequence 148629-148658 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP016558 Vibrio coralliilyticus strain 58 plasmid pVs58, complete sequence 32031-32060 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP046164 Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence 241543-241572 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP046067 Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence 386803-386832 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP031474 Vibrio coralliilyticus strain RE22 plasmid p337, complete sequence 136274-136303 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP009266 Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence 329736-329765 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP009620 Vibrio coralliilyticus strain RE98 plasmid p319, complete sequence 10320-10349 7 0.767
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP045357 Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence 338615-338644 7 0.767
NZ_LR735429_1 1.1|69104|29|NZ_LR735429|CRISPRCasFinder,CRT 69104-69132 29 HG424323 Streptococcus phage 20617 complete prophage genome 47332-47360 8 0.724
NZ_LR735429_1 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69301-69329 29 MH572288 Microviridae sp. isolate SD_SC_57, complete genome 3831-3859 8 0.724
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MN172529 Listeria phage LP-039, complete genome 76714-76743 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MT438761 Listeria virus P61, complete genome 88473-88502 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MT668624 Listeria phage LP-Mix_6.2, complete genome 78060-78089 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MT178766 Listeria virus P100plus, complete genome 43686-43715 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_025440 Listeria phage WIL-1, complete genome 89123-89152 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_047872 Listeria phage LMTA-94, complete genome 54672-54701 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 DQ003638 Listeria phage A511, complete genome 77251-77280 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MT178767 Listeria virus P200, complete genome 43686-43715 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 DQ004855 Listeria bacteriophage P100, complete genome 43685-43714 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ591604 Listeria phage LMTA-148, complete genome 85927-85956 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ591605 Listeria phage LMTA-57, complete genome 65422-65451 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ094033 Listeria phage LP-048, complete genome 79171-79200 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ668715 Listeria phage LMTA-34, partial genome 41534-41563 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MN128594 Listeria phage LP-066, complete genome 78210-78239 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_042048 Listeria phage LMTA-34, complete genome 92269-92298 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 MK792752 UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome 61651-61680 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_041862 Listeria phage LP-064, complete genome 86671-86700 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ094030 Listeria phage LP-083-2, complete genome 83376-83405 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 JX126918 Listeria phage LP-125, complete genome 86673-86702 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 NC_024360 Listeria phage LMSP-25, complete genome 92269-92298 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 JQ797329 Listeria phage vB_LmoM_AG20, complete genome 76560-76589 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ535721 Listeria phage List-36, complete genome 51787-51816 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KJ094031 Listeria phage LP-124, complete genome 45491-45520 8 0.733
NZ_LR735429_1 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69366-69395 30 KT319604 UNVERIFIED: Listeria phage WIL-3 genomic sequence 2068-2097 8 0.733
NZ_LR735429_1 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69432-69461 30 NZ_CP031836 Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence 166661-166690 8 0.733
NZ_LR735429_1 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69432-69461 30 NZ_CP020458 Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence 179993-180022 8 0.733
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 NZ_CP049914 Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence 374388-374417 8 0.733
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 NZ_CP013709 Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence 33462-33491 8 0.733
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 NZ_CP013844 Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence 68947-68976 8 0.733
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 MF417893 Uncultured Caudovirales phage clone 9AX_2, partial genome 4659-4688 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NC_014937 Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence 67403-67432 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP004875 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence 41602-41631 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NC_017202 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence 100658-100687 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP011357 Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence 55926-55955 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP015155 Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence 70553-70582 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP004868 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence 53636-53665 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP010110 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence 19759-19788 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP048879 Oceanospirillales bacterium S2-4-1H plasmid pA, complete sequence 71096-71125 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NC_020393 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence 75766-75795 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP021063 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence 36212-36241 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NC_020239 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence 50398-50427 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP028726 Enterococcus faecalis strain CVM N60443F plasmid pN60443F-1, complete sequence 21143-21172 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP010580 Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence 6496-6525 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP013058 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence 33414-33443 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 NZ_CP007614 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence 40363-40392 8 0.733
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 CP020756 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence 102029-102058 8 0.733
NZ_LR735429_1 1.14|69960|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69960-69989 30 NZ_CP045959 Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence 134822-134851 8 0.733
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 155846-155875 8 0.733
NZ_LR735429_1 1.16|70092|30|NZ_LR735429|CRT,PILER-CR 70092-70121 30 CP030657 Staphylococcus aureus strain ER04448.3 plasmid unnamed2, complete sequence 14407-14436 8 0.733
NZ_LR735429_1 1.8|69564|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69564-69593 30 CP008937 Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence 50888-50917 9 0.7
NZ_LR735429_1 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69630-69659 30 NZ_CP026119 Halobacillus litoralis strain ERB 031 plasmid pLDW-31, complete sequence 96261-96290 9 0.7
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN692988 Marine virus AFVG_117M76, complete genome 3123-3152 9 0.7
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MT774396 CrAssphage cr53_1, complete genome 61861-61890 9 0.7
NZ_LR735429_1 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69696-69725 30 MN692960 Marine virus AFVG_117M7, complete genome 36164-36193 9 0.7
NZ_LR735429_1 1.12|69828|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR 69828-69857 30 NC_015057 Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence 113013-113042 9 0.7

1. spacer 1.1|69104|29|NZ_LR735429|CRISPRCasFinder,CRT matches to NZ_CP031197 (Staphylococcus saprophyticus strain 1A plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

caaaagtttttccaaatgatgggcacaac	CRISPR spacer
caaaagtttttccaaatgatgggcacaac	Protospacer
*****************************

2. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031197 (Staphylococcus saprophyticus strain 1A plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

3. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417899 (Uncultured Caudovirales phage clone 7S_8, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

4. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417901 (Uncultured Caudovirales phage clone 9S_1, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

5. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KY653117 (Staphylococcus phage IME1323_01, complete genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

6. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417983 (Uncultured Caudovirales phage clone 10S_3, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

7. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417900 (Uncultured Caudovirales phage clone 8AX_1, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

8. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417895 (Uncultured Caudovirales phage clone 10AX_1, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

9. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417909 (Uncultured Caudovirales phage clone 10F_7, partial genome) position: , mismatch: 0, identity: 1.0 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgctatgt	Protospacer
******************************

10. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN192400 (Staphylococcus phage vB_SepiS-phiIPLA5, complete genome) position: , mismatch: 0, identity: 1.0 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattag	Protospacer
******************************

11. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KY653120 (Staphylococcus phage IME1348_01, complete genome) position: , mismatch: 1, identity: 0.967 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaaaatttggtttactatcgctatgt	Protospacer
*******.**********************

12. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_008723 (Staphylococcus phage PH15, complete genome) position: , mismatch: 1, identity: 0.967 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaaaatttggtttactatcgctatgt	Protospacer
*******.**********************

13. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_019914 (Staphylococcus phage StB27, complete genome) position: , mismatch: 1, identity: 0.967 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgcaatgt	Protospacer
************************* ****

14. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_028821 (Staphylococcus phage StB20-like, complete genome) position: , mismatch: 1, identity: 0.967 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatttggtttactatcgcgatgt	Protospacer
************************* ****

15. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KY653120 (Staphylococcus phage IME1348_01, complete genome) position: , mismatch: 1, identity: 0.967 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattaa	Protospacer
*****************************.

16. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KU598975 (Staphylococcus phage CNPx, complete genome) position: , mismatch: 1, identity: 0.967 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattaa	Protospacer
*****************************.

17. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN192401 (Staphylococcus phage vB_SepiS-phiIPLA7, complete genome) position: , mismatch: 1, identity: 0.967 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattaa	Protospacer
*****************************.

18. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_008723 (Staphylococcus phage PH15, complete genome) position: , mismatch: 1, identity: 0.967 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattaa	Protospacer
*****************************.

19. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to DQ831957 (Staphylococcus phage CNPH82, complete genome) position: , mismatch: 1, identity: 0.967 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggactggttatcatgtttaatccattaa	Protospacer
*****************************.

20. spacer 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417888 (Uncultured Caudovirales phage clone 9S_3, partial genome) position: , mismatch: 1, identity: 0.967 

aaggcgaaacagatcatgacaaactaggca	CRISPR spacer
aaggcgaaacagatcatgacaaactaggta	Protospacer
****************************.*

21. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KY653120 (Staphylococcus phage IME1348_01, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

22. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN192400 (Staphylococcus phage vB_SepiS-phiIPLA5, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

23. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KU598975 (Staphylococcus phage CNPx, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

24. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN192401 (Staphylococcus phage vB_SepiS-phiIPLA7, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

25. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_008723 (Staphylococcus phage PH15, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

26. spacer 1.7|69498|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to DQ831957 (Staphylococcus phage CNPH82, complete genome) position: , mismatch: 1, identity: 0.967 

catcttaccttgctattatgacggtaaaca	CRISPR spacer
tatcttaccttgctattatgacggtaaaca	Protospacer
.*****************************

27. spacer 1.12|69828|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031197 (Staphylococcus saprophyticus strain 1A plasmid unnamed1) position: , mismatch: 1, identity: 0.967 

gataagacgtttactcataacagaaacagc	CRISPR spacer
gataagacgtttactcataacggaaacagc	Protospacer
*********************.********

28. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AY954962 (Bacteriophage 71, complete genome) position: , mismatch: 2, identity: 0.933 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tcttaaaaatttggtttactatcgctatgt	Protospacer
* *****.**********************

29. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN192400 (Staphylococcus phage vB_SepiS-phiIPLA5, complete genome) position: , mismatch: 2, identity: 0.933 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatatggttcactatcgctatgt	Protospacer
********** *****.*************

30. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_007059 (Staphylococcus phage 71, complete genome) position: , mismatch: 2, identity: 0.933 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tcttaaaaatttggtttactatcgctatgt	Protospacer
* *****.**********************

31. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JN700521 (Staphylococcus phage StB20, complete genome) position: , mismatch: 2, identity: 0.933 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
tattaaagatatggttcactatcgctatgt	Protospacer
********** *****.*************

32. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417972 (Uncultured Caudovirales phage clone 10S_4, partial genome) position: , mismatch: 3, identity: 0.9 

ttggactggttatcatgtttaatccattag	CRISPR spacer
ttggagtggttatcatgtttaatccatacg	Protospacer
***** *********************  *

33. spacer 1.3|69235|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417976 (Uncultured Caudovirales phage clone 3S_5, partial genome) position: , mismatch: 5, identity: 0.833 

tattaaagatttggtttactatcgctatgt	CRISPR spacer
taatgagaatatggtttactatcgctatgt	Protospacer
** *.*..** *******************

34. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013490 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C30B-MedDCM-OCT-S46-C80) position: , mismatch: 5, identity: 0.833 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
cagaggaaatagaacaagctaaaaaagata	Protospacer
**.  **************** ****.***

35. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013770 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S41-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.833 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
cagaggaaatagaacaagctaaaaaagata	Protospacer
**.  **************** ****.***

36. spacer 1.14|69960|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_014025 (Bacillus megaterium QM B1551 plasmid pBM500, complete sequence) position: , mismatch: 5, identity: 0.833 

tgtttattcagttttgtgatttatataata	CRISPR spacer
cttttgttcagttttttgatttatataaga	Protospacer
. ***.********* ************ *

37. spacer 1.2|69169|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8 

-attgattcagtttgtagcacttttcactac	CRISPR spacer
gattggcct-gtttgtcgcacttttcactac	Protospacer
 ****.... ****** **************

38. spacer 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 6, identity: 0.793 

acttatcgctgcatgaacagcacccataa	CRISPR spacer
gcgtctcgctgcaggaacaggacccatat	Protospacer
.* * ******** ****** *******

39. spacer 1.8|69564|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MW117966 (Synechococcus phage S-H9-1, complete genome) position: , mismatch: 6, identity: 0.8 

tatcttttatgttggaaccaaattcaactg	CRISPR spacer
tactttttatgttggaaacaaatacaagtt	Protospacer
**..************* ***** *** *

40. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013655 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S28-C120, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
taataaaagctaaaaatgaggatgaagcat	Protospacer
* .******************* *** ..*

41. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013558 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C24-MedDCM-OCT-S38-C43, *** SEQUENCING IN PROGRESS ***, 8 ordered pieces) position: , mismatch: 6, identity: 0.8 

ttgtaaaagctaaaaatgaggaaga-actgt	CRISPR spacer
taataaaagctaaaaatgaggatgacgcta-	Protospacer
* .******************* ** .**.

42. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215001 (Mycoplasma conjunctivae strain NCTC10147 plasmid 5) position: , mismatch: 6, identity: 0.8 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
taattaaaatagaaaaagctaaaaaaaata	Protospacer
.**...******** ****** ********

43. spacer 1.13|69894|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_002094 (Marinococcus halophilus plasmid pPL1, complete sequence) position: , mismatch: 6, identity: 0.8 

tcttgcctctttgaacagaccagaatacac	CRISPR spacer
attggattctttaaacagaccagaatacac	Protospacer
 .* * .*****.*****************

44. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to AJ560763 (Bacteriophage Aaphi23 complete genome) position: , mismatch: 6, identity: 0.8 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
tttgattgaagttataaaataactttaagg	Protospacer
.*.*******************.** *  *

45. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NC_004827 (Bacteriophage Aaphi23, complete genome) position: , mismatch: 6, identity: 0.8 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
tttgattgaagttataaaataactttaagg	Protospacer
.*.*******************.** *  *

46. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to GQ866233 (Aggregatibacter phage S1249, complete sequence) position: , mismatch: 6, identity: 0.8 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
tttgattgaagttataaaataactttaagg	Protospacer
.*.*******************.** *  *

47. spacer 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053580 (Salmonella enterica strain 94-0093 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759 

acttatcgctgcatgaacagcacccataa	CRISPR spacer
ttttatccctgcatgaacaccacccccta	Protospacer
 .***** *********** ***** . *

48. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013634 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S42-C185, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
atgtaaaagcaaaaaatgaagaagaagcaa	Protospacer
 ********* ********.****** ..

49. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP013620 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S24-C131, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
atgtaaaagcaaaaaatgaagaagaagcaa	Protospacer
 ********* ********.****** ..

50. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to AP014419 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C120, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 7, identity: 0.767 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
taataaaagctaaaaatgaggatgatgctt	Protospacer
* .******************* **  . *

51. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MK448919 (Streptococcus phage Javan370, complete genome) position: , mismatch: 7, identity: 0.767 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
tagcaaaagctaaatatgaggaagatgtag	Protospacer
* *.********** **********  *.

52. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MK448921 (Streptococcus phage Javan374, complete genome) position: , mismatch: 7, identity: 0.767 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
tagcaaaagctaaatatgaggaagatgtag	Protospacer
* *.********** **********  *.

53. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY303941 (Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
tgaacgaaaaagaactagctataaaaaaat	Protospacer
..* ***** ***** ************

54. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ttattaaaatagaaaaagctataagaaata	Protospacer
. *...******** *********.*****

55. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
gtgctaaaatagaacaagctgtaagaaata	Protospacer
  .*..**************.***.*****

56. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034782 (Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
taaccgaaatagaacaggctattcaggaca	Protospacer
.***************.*****  *..*.*

57. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046318 (Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaa--atagaacaagctataaaaaata	CRISPR spacer
--atcgtgctttagaacaagctataaaagata	Protospacer
  *.** .   *****************.***

58. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046318 (Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaa--atagaacaagctataaaaaata	CRISPR spacer
--atcgtgctttagaacaagctataaaagata	Protospacer
  *.** .   *****************.***

59. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046318 (Campylobacter coli strain FDAARGOS_735 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaa--atagaacaagctataaaaaata	CRISPR spacer
--atcgtgctttagaacaagctataaaagata	Protospacer
  *.** .   *****************.***

60. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_025153 (Arcobacter butzleri strain AC1119 plasmid AB-1119-LD, complete sequence) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
aagaggaaatggaacaagctataaaataga	Protospacer
 *.  *****.*************** * *

61. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN694470 (Marine virus AFVG_250M476, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
gaaatacaatagaacaagatataaagaata	Protospacer
 ** .. *********** ******.****

62. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN693658 (Marine virus AFVG_250M475, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
gaaatacaatagaacaagatataaagaata	Protospacer
 ** .. *********** ******.****

63. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN694582 (Marine virus AFVG_250M1184, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ataaagcaatagaccaaggtataaaaaata	Protospacer
  *  * ****** **** ***********

64. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN693967 (Marine virus AFVG_250M992, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
aatgggcaatagaacaagctcaaaaaaata	Protospacer
 *   * *************  ********

65. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN694567 (Marine virus AFVG_250M1183, complete genome) position: , mismatch: 7, identity: 0.767 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ataaagcaatagaccaaggtataaaaaata	Protospacer
  *  * ****** **** ***********

66. spacer 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MK376957 (Gordonia phage Duffington, complete genome) position: , mismatch: 7, identity: 0.767 

gaaaaattcattcactcaatgggaaatcaa--	CRISPR spacer
attcaatccattcactcaatgggaa--caatg	Protospacer
.   ***.*****************  ***

67. spacer 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN204501 (Gordonia phage Chikenjars, complete genome) position: , mismatch: 7, identity: 0.767 

gaaaaattcattcactcaatgggaaatcaa--	CRISPR spacer
attcaatccattcactcaatgggaa--caatg	Protospacer
.   ***.*****************  ***

68. spacer 1.11|69762|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT498052 (Gordonia phage Jodelie19, complete genome) position: , mismatch: 7, identity: 0.767 

gaaaaattcattcactcaatgggaaatcaa--	CRISPR spacer
attcaatccattcactcaatgggaa--caatg	Protospacer
.   ***.*****************  ***

69. spacer 1.15|70026|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016458 (Blastomonas sp. RAC04 plasmid pBSY18_2, complete sequence) position: , mismatch: 7, identity: 0.767 

aaatcgctcatgcgcatcactacacagagg	CRISPR spacer
aaatcgctcatccgcatcactgccatgggt	Protospacer
*********** *********.*   *.*

70. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP016558 (Vibrio coralliilyticus strain 58 plasmid pVs58, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

71. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP046164 (Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

72. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP046067 (Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

73. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP031474 (Vibrio coralliilyticus strain RE22 plasmid p337, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

74. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP009266 (Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

75. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP009620 (Vibrio coralliilyticus strain RE98 plasmid p319, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

76. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP045357 (Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence) position: , mismatch: 7, identity: 0.767 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
attgattgaaataataaaataatttatttc	Protospacer
 *.*******.* ************* .*

77. spacer 1.1|69104|29|NZ_LR735429|CRISPRCasFinder,CRT matches to HG424323 (Streptococcus phage 20617 complete prophage genome) position: , mismatch: 8, identity: 0.724 

caaaagtttttccaaatgatgggcacaac	CRISPR spacer
atgaagtttttctaaatgatgggctaatg	Protospacer
  .*********.***********  *

78. spacer 1.4|69301|29|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MH572288 (Microviridae sp. isolate SD_SC_57, complete genome) position: , mismatch: 8, identity: 0.724 

acttatcgctgcatgaacagcacccataa	CRISPR spacer
aaaagcagctgcatgaacagcaccaatac	Protospacer
*   .. ***************** ***

79. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

80. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

81. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

82. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

83. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

84. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

85. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

86. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

87. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to DQ004855 (Listeria bacteriophage P100, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

88. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

89. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

90. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

91. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ668715 (Listeria phage LMTA-34, partial genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

92. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

93. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

94. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

95. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

96. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

97. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

98. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

99. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

100. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

101. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

102. spacer 1.5|69366|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to KT319604 (UNVERIFIED: Listeria phage WIL-3 genomic sequence) position: , mismatch: 8, identity: 0.733 

ttggactggttatcatgtttaatccattag	CRISPR spacer
gtggactagttatcatgtttaataaaaata	Protospacer
 ******.***************  *   .

103. spacer 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733 

aaggcgaaacagatcatgacaaactaggca	CRISPR spacer
aaggcgaaacagatcattacagcatgatta	Protospacer
***************** ***.  *.. .*

104. spacer 1.6|69432|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 8, identity: 0.733 

aaggcgaaacagatcatgacaaactaggca	CRISPR spacer
aaggcgaaacagatcattacagcatgatta	Protospacer
***************** ***.  *.. .*

105. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
aagaaaaagctaaaaataaagaagaacgtc	Protospacer
  * *************.*.*******  .

106. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.733 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
cagtaaaaactaaaaatgaggtagaggtag	Protospacer
. ******.************ ***. *.

107. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.733 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
cagtaaaaactaaaaatgaggtagaggtag	Protospacer
. ******.************ ***. *.

108. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MF417893 (Uncultured Caudovirales phage clone 9AX_2, partial genome) position: , mismatch: 8, identity: 0.733 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
atgcaaaagctaaaattgaggaagcgaaga	Protospacer
 **.*********** ******** .  *

109. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_014937 (Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

110. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

111. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

112. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

113. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

114. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004868 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

115. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

116. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048879 (Oceanospirillales bacterium S2-4-1H plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
atttctcaatagaaaaagctatagaaaata	Protospacer
   .*  ******* ********.******

117. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

118. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

119. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_020239 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

120. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028726 (Enterococcus faecalis strain CVM N60443F plasmid pN60443F-1, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
atatatcaaaagaacaagcaataaaaaata	Protospacer
  *.   ** ********* **********

121. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010580 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB76, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

122. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

123. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007614 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

124. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 8, identity: 0.733 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ctaaaacaatagaagaagctataaaaaaat	Protospacer
* *  . ******* *************

125. spacer 1.14|69960|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 8, identity: 0.733 

tgtttattcagttttgtgatttatataata	CRISPR spacer
ctcttattctgttttgttatttatatttca	Protospacer
. .****** ******* ********  .*

126. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
aaaaatagaagatataaaataatttaacat	Protospacer
   .** **** ****************

127. spacer 1.16|70092|30|NZ_LR735429|CRT,PILER-CR matches to CP030657 (Staphylococcus aureus strain ER04448.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733 

ctcgattgaagttataaaataatttaactg	CRISPR spacer
caaagttgaatttataatataatttaacaa	Protospacer
*  ..***** ****** ********** .

128. spacer 1.8|69564|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to CP008937 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence) position: , mismatch: 9, identity: 0.7 

tatcttttatgttggaaccaaattcaactg	CRISPR spacer
taacttttgtgttggaaccaaatgtcttct	Protospacer
** *****.************** .  ..

129. spacer 1.9|69630|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026119 (Halobacillus litoralis strain ERB 031 plasmid pLDW-31, complete sequence) position: , mismatch: 9, identity: 0.7 

ttgtaaaagctaaaaatgaggaagaactgt	CRISPR spacer
tacatgcagctaaaaatgaggaagagctac	Protospacer
*    . ******************.**..

130. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN692988 (Marine virus AFVG_117M76, complete genome) position: , mismatch: 9, identity: 0.7 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ggtattcaatagaacaagcaataaaagata	Protospacer
 .  .  ************ ******.***

131. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MT774396 (CrAssphage cr53_1, complete genome) position: , mismatch: 9, identity: 0.7 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ataaagaaatagaacaggctataaaactgg	Protospacer
  *  ***********.*********   .

132. spacer 1.10|69696|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to MN692960 (Marine virus AFVG_117M7, complete genome) position: , mismatch: 9, identity: 0.7 

caaccgaaatagaacaagctataaaaaata	CRISPR spacer
ggtattcaatagaacaagcaataaaagata	Protospacer
 .  .  ************ ******.***

133. spacer 1.12|69828|30|NZ_LR735429|CRISPRCasFinder,CRT,PILER-CR matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 9, identity: 0.7 

gataagacgtttactcataacagaaacagc	CRISPR spacer
ctcaagacgtttactcataacgtaaatcag	Protospacer
  .******************. ***. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1060398 : 1103391 33 Staphylococcus_phage(92.86%) tRNA NA
DBSCAN-SWA_2 1215563 : 1224715 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_3 1814491 : 1822961 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 2048876 : 2055124 6 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_5 2087288 : 2097724 10 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_6 2237684 : 2251384 22 Staphylococcus_phage(64.29%) integrase,terminase attL 2232427:2232443|attR 2249662:2249678

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage