CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR735438	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2	0 crisprs	NA	0	0	1	1
NZ_LR735439	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 3	0 crisprs	NA	0	0	0	0
NZ_LR735437	Staphylococcus epidermidis strain none isolate Se_BPH0723 chromosome 1	8 crisprs	cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6,csa3,WYL,DEDDh,cas3,DinG	5	17	6	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12026 : 29465

Staphylococcus_phage(61.54%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831389.1\|12026_12968_-	cation transporter	A0A1V0SED0	Indivirus	6.6e-20	27.0
WP_155976059.1\|13330_13723_-	hypothetical protein	NA	NA	NA	NA
WP_001106022.1\|13738_14413_+\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.2e-129	100.0
WP_002497446.1\|15512_15572_+	23S rRNA methylase leader peptide ErmCL	NA	NA	NA	NA
WP_001003263.1\|15616_16351_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C)	E4ZFQ0	Streptococcus_phage	2.1e-61	50.4
WP_002505100.1\|16797_16968_+	replication/maintenance protein RepL	NA	NA	NA	NA
WP_001106022.1\|16992_17667_+\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.2e-129	100.0
WP_000175735.1\|18130_18616_-	trimethoprim-resistant dihydrofolate reductase DfrC	A0A0N9S8H6	Staphylococcus_phage	1.1e-90	100.0
WP_000282655.1\|18657_19614_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.1e-190	100.0
WP_001106019.1\|19727_20402_+\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	8.1e-129	100.0
WP_001063224.1\|20510_20699_-	hypothetical protein	NA	NA	NA	NA
WP_088591893.1\|20870_21854_+	transfer complex protein TraA	NA	NA	NA	NA
WP_002505216.1\|21860_22199_+	membrane protein	NA	NA	NA	NA
WP_001105984.1\|22228_22903_+\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	3.8e-126	98.2
WP_000393259.1\|23394_23787_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
WP_001028144.1\|23787_25227_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
WP_001105984.1\|25750_26425_+\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	3.8e-126	98.2
WP_000360133.1\|26534_27995_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	1.4e-72	36.1
WP_002505083.1\|28058_29465_-	NADP-dependent phosphogluconate dehydrogenase	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	1.4e-42	29.3

Anti-CRISPR protein detection

Acr_ID: NZ_LR735438.1|WP_002505100.1|16797_16968_+|replication/maintenance-protein-RepL

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_LR735438.1|WP_002505100.1|16797_16968_+|replication/maintenance-protein-RepL

16797_16968_+

56 aa aa

12026-29465

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_LR735437_1	Orphan	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	16301-16266	0

1. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR735438 position: 16301-16266, mismatch: 0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

2. NZ_LR735437

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR735437_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_1

92786-93688

Orphan

Consensus_repeat	Method
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	CRISPRCasFinder
GATCGATAACTATCCCGAAGAACAGGGGATGAGAACNN	CRT

12 spacers

The CRISPR arrays of NZ_LR735437_1

>merge|NZ_LR735437|1|92786-93688|CRISPRCasFinder,CRT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAACAGCTAATATTGTTTAAATCGTCAATTCCTGCATGTTGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTTGTACCGTGTATATAACTTGCAAGATCTGAAGATAGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTTTAACAAGTTAAAAATGTATGCAAAAGTTAAAAAGAGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTAGTGAGGGGATTTTTTAGGTGTACTTAAATTTGTCATGATCGATAACTATCCCGAAGAACAGGGGATGAGAACCTAACTTTTTCGCTAAATATTTTCTCACAACCAAAATGATCGATAACTATCCCGAAGAACAGGGGATGAGAACCATATCTCTTTGATCATTCATTTGTTTATCACTTGCGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTTCTAGTTACGTTGTCAATAGTTTTTTTTAAATTTCGATCGATAACTATCCCGAAGAACAGGGGATGAGAACATTAGGTGTTAAATCAATAATTTCTGAATCATCAGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTCCAGTTTCTTGTATTTCTTTGCTAAATAAACCACCGATCGATAACTATCCCGAAGAACAGGGGATGAGAACGATAAATATCTATAATTAACAATTTTCTTATTGAAGATCGATAACTATCCCGAAGAACAGGGGATGAGAACTCCAACTTACTATTTCCTTCTTGAAAAGTAAACTTCAATTCGATAACTACCCCGGAGAACAGGGGATGAGAACCTCATCTTGGTGATCCCAATTGGCTTGGTTAAAAAGAAATCGATAACCCTCGTAGAATAGAGAACAAGTATTA

>NZ_LR735437|1|1|92786-93615|CRISPRCasFinder
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	AGCTAATATTGTTTAAATCGTCAATTCCTGCATGTT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTGTACCGTGTATATAACTTGCAAGATCTGAAGATA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTTAACAAGTTAAAAATGTATGCAAAAGTTAAAAAGA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TAGTGAGGGGATTTTTTAGGTGTACTTAAATTTGTCAT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	CTAACTTTTTCGCTAAATATTTTCTCACAACCAAAAT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	CATATCTCTTTGATCATTCATTTGTTTATCACTTGC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTCTAGTTACGTTGTCAATAGTTTTTTTTAAATTTC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	ATTAGGTGTTAAATCAATAATTTCTGAATCATCA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TCCAGTTTCTTGTATTTCTTTGCTAAATAAACCACC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	GATAAATATCTATAATTAACAATTTTCTTATTGAA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TCCAACTTACTATTTCCTTCTTGAAAAGTAAACTTCA
ATTCGATAACTACCCCGGAGAACAGGGGATGAGAAC

>NZ_LR735437|1|1|92786-93688|CRT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	AGCTAATATTGTTTAAATCGTCAATTCCTGCATGTT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTGTACCGTGTATATAACTTGCAAGATCTGAAGATA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTTAACAAGTTAAAAATGTATGCAAAAGTTAAAAAGA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TAGTGAGGGGATTTTTTAGGTGTACTTAAATTTGTCAT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	CTAACTTTTTCGCTAAATATTTTCTCACAACCAAAAT
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	CATATCTCTTTGATCATTCATTTGTTTATCACTTGC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TTCTAGTTACGTTGTCAATAGTTTTTTTTAAATTTC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	ATTAGGTGTTAAATCAATAATTTCTGAATCATCA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TCCAGTTTCTTGTATTTCTTTGCTAAATAAACCACC
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	GATAAATATCTATAATTAACAATTTTCTTATTGAA
GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC	TCCAACTTACTATTTCCTTCTTGAAAAGTAAACTTCA
ATTCGATAACTACCCCGGAGAACAGGGGATGAGAAC	CTCATCTTGGTGATCCCAATTGGCTTGGTTAAAAAGA
AATCGATAACCCTCGTAGAATAGAGAACAAGTATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_000036757.1\|105949_106879_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_LR735437.1\|WP_002469425.1\|91276_92173_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225212
NZ_LR735437.1\|WP_002469407.1\|82858_84178_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	unknown	unknown	gnl\|CDD\|274351
NZ_LR735437.1\|WP_001830710.1\|95505_96219_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LR735437.1\|WP_001830698.1\|96223_98878_-\|sensor-histidine-kinase-KdpD	unknown	unknown	gnl\|CDD\|225115
NZ_LR735437.1\|WP_002469297.1\|75584_76214_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002469391.1\|87388_88645_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341202
NZ_LR735437.1\|WP_002467980.1\|77466_77700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001830703.1\|94044_94200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001551920.1\|81357_82866_+\|accessory-Sec-system-glycosyltransferase-GtfA	unknown	unknown	gnl\|CDD\|131964
NZ_LR735437.1\|WP_001830720.1\|99044_99125_+\|potassium-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_LR735437.1\|WP_155976019.1\|77945_81269_+\|MSCRAMM-family-cell-wall-anchored-protein-SesJ	unknown	unknown	gnl\|CDD\|380146
NZ_LR735437.1\|WP_155976020.1\|90560_91280_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001830719.1\|103751_104093_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002505145.1\|99145_100828_+\|potassium-transporting-ATPase-subunit-A	unknown	unknown	gnl\|CDD\|224971
NZ_LR735437.1\|WP_001830712.1\|102882_103443_+\|K(+)-transporting-ATPase-subunit-C	unknown	unknown	gnl\|CDD\|184446
NZ_LR735437.1\|WP_002469414.1\|84285_87405_-\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_LR735437.1\|WP_002469396.1\|88634_90131_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_LR735437.1\|WP_032601514.1\|100846_102868_+\|K(+)-transporting-ATPase-subunit-B	unknown	unknown	gnl\|CDD\|234905
NZ_LR735437.1\|WP_099797811.1\|94985_95051_-\|epsilon-family-phenol-soluble-modulin	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_002469425.1\|91276_92173_-\|hypothetical-protein	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.29755e-09
NZ_LR735437.1\|WP_002469407.1\|82858_84178_+\|accessory-Sec-system-glycosylation-chaperone-GtfB	gnl\|CDD\|274351	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. [Protein fate, Protein modification and repair].	6.26222e-160
NZ_LR735437.1\|WP_001830710.1\|95505_96219_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.0817e-63
NZ_LR735437.1\|WP_001830698.1\|96223_98878_-\|sensor-histidine-kinase-KdpD	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0
NZ_LR735437.1\|WP_001551920.1\|81357_82866_+\|accessory-Sec-system-glycosyltransferase-GtfA	gnl\|CDD\|131964	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. [Protein fate, Protein modification and repair].	0
NZ_LR735437.1\|WP_002469391.1\|87388_88645_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341202	cd17521, RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) TRD2-CR2, Escherichia coli E24377A S subunit (S.EcoE24377ORF286P) TRD1-CR1 and Pseudoalteromonas species P1-13-1a S. subunit (S.Psp1bORF2093P) TRD2-CR2. Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) recognizes 5'... TCTANNNNNNRTTC ... 3', and the recognition sequences of Escherichia coli E24377A S subunit (S.EcoE24377ORF286P) and Pseudoalteromonas species P1-13-1a S subunit (S.Psp1bORF2093P) are undetermined. The restriction-modification (RM) system S subunit generally consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, Staphylococcus aureus NCTC 13435 S subunit (S.Sau13435ORF2165P) TRD1 recognizes TCTA/TAGA, and -TRD2 recognizes GAAY/RTTC. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. In addition, this family includes RMtype1_S_TRD-CR_like domains of various putative Helicobacter type II restriction enzymes and methyltransferases, such as Hci611ORFHP and HfeORF12890P.	1.60059e-70
NZ_LR735437.1\|WP_155976019.1\|77945_81269_+\|MSCRAMM-family-cell-wall-anchored-protein-SesJ	gnl\|CDD\|380146	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	2.9424e-111
NZ_LR735437.1\|WP_000036757.1\|105949_106879_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_LR735437.1\|WP_002505145.1\|99145_100828_+\|potassium-transporting-ATPase-subunit-A	gnl\|CDD\|224971	COG2060, KdpA, K+-transporting ATPase, A chain [Inorganic ion transport and metabolism].	0
NZ_LR735437.1\|WP_001830712.1\|102882_103443_+\|K(+)-transporting-ATPase-subunit-C	gnl\|CDD\|184446	PRK14000, PRK14000, K(+)-transporting ATPase subunit C.	9.41341e-96
NZ_LR735437.1\|WP_002469414.1\|84285_87405_-\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_LR735437.1\|WP_002469396.1\|88634_90131_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.65429e-143
NZ_LR735437.1\|WP_032601514.1\|100846_102868_+\|K(+)-transporting-ATPase-subunit-B	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0

>NZ_LR735437.1|WP_002469425.1|91276_92173_-|hypothetical-protein
MSIIKSYSVGNGDMFYIKHGTDNFSIIDCCLYNDKKDIIIKEILEIASTKEIVRFISTHPDEDHIHGLELLNKNLNITNFYCVKNNAKKNDFSQSFEEYKKLRDSNKSFYIHKDSQRKWMNISDESRGSSGINILWPDTDNEYFKNELQKAAEKISFNDISPIIQYKLDKGVTALWMGDLTTDFMEKIENEVNWEKVDILFAPHHSRKSGRVPSNILNKLNPKLIVVGEANSKDLYYYSNYTTITQRKAGDIVFDCQTGTINIHVSNLNYEAKNLEKDSKIPTIYDNLKYIGSVTTYN
>NZ_LR735437.1|WP_155976020.1|90560_91280_+|hypothetical-protein
MKEFLMIFFNKYELKAIIAPGMISIMSFFTTLIIYFPDSLNLGSSLIVIILLIFYIYLFSIIARENGKMVEKKLFSQSSNIYPTTQILRYSDDTLNIKTKERYHSFLQENIPCIELPSYEDARDKKENYFDDEYDSAIDWLLKNTREDYMTAQHNMEYGFYRNLLGIKYIGIIIVLISIVFSIVVFILSQENVTIQLVLSSIINVFFLYFWIFKVTKTQTRKSAKRYAQSLLANCDFKS
>NZ_LR735437.1|WP_002469396.1|88634_90131_-|SAM-dependent-DNA-methyltransferase
MATIGFEEKLWQAADKLRGSMDAAEYKNVALGLIFLKYVSDSFEEKYEELKQDPYADEEDQDEYLAENIFWVPKEARWHYINDNAKKPEIGQLIDKAMIAIENENESLKGVLPKEYARPALDKEKLGDIIDLFTFKVGDTESRKQDVLGRVYEYFIAKFASAEGKNAGEFYTPSSIVKLLVEMIEPYKGRIYDPCCGSGGMFVQSERFVEKHQGRLDDIAIYGQESNPTTWKLAKMNLAIRGIDNNLGERNADTFHNDLHKGLKADYILANPPFNASDWGQERLLDDYRWQFGVPPKGNANYAWIEHMISKLAPNGTAGFVLANGSMSTSGKDELEIRKNLIEQDLVECIVTLPGQLFYSTQIPVCLWFISNNKERKNEILFIDAREIGHMVSRTLKEFSDEDIQKVAQTYHSWKGTNDKSYEDIAGFCKIANLEEVKNNEYILTPGRYVGLADVEEDEEPFEQKMERITSELSEQFAKSKELEDQIRKSLEGLGYGV
>NZ_LR735437.1|WP_002469391.1|87388_88645_-|restriction-endonuclease-subunit-S
MEFNKYKLKDLTVNGKGEYGIGAPAVKYSPNLYKYLRITDIDDNGFINTNQMKSINDKNEEKYLLKANDIVFARTGNSTGKSYFYNSDDGPLVYAGFLIKFSLDPTKLNPKYLRYYTLTNEYKGWINQFSIGSTRKNINAKIFGDMVISLPPRYYQDFVVDILDSLERKVKINKQMVANLEELSQTLFKHWFVDFEFPDEDGNPYKSSGGEMIDSELGEIPSDWKVGVLSDMTEIIMGQSPKSDTYNNNKVGLPLLNGASDFKNRNIKPTKYTSAPKKIGHNLDYVFGVRATIGLVTELDGEYAIGRGAGLSKNNEENREFIYEILNQAFTYFERIGSGSVYINISSKDLKQYKLIIPSKQVLMKYHYQLEPIFSELHNRKEQITSLTNLRDTLLPKLMSGELEIPDDIEVNIDEFSI
>NZ_LR735437.1|WP_002469414.1|84285_87405_-|type-I-restriction-endonuclease-subunit-R
MNFQFNEDDLEQVALEWLQSLGYDYKKGSEISVTGLAPERKSDKDVVLHERLEKALRKINSDIHPRFIEKAIHELTLEKSPNLLENNLTFHENLINGIEVEDYDNEGQSIVEIVKIVDFEHPQNNDFLAVNQLTIVNGDYTKRPDIVLFINGLPIVVIELKNSTYETVGVEDGYHQLETYKMCIPQLFTFNEVLVTSDGINTKAGSLTANYDRFMTWRSKDGQTESSPGLASLDVLIHGMLNPETLLDLIRYFVLFQDDGKEHISKILAAYHQYYAVNKAVDRALLASSGQGDGKGGVIWHTQGSGKSLTMVFFSGKLIQMLNNPTLVVVTDRNDLDNQLYSTFVKSKGRSGKGLLRQTPKQAETRKELKSLLSVESGGIVFTTMQKFEPEQNETTMAALTERKNVIVMADEAHRTQYGFNAKYDDKGEGIKYGYAKYLRDALPNATFVGFTGTPVASTDKNTQMVFGNYIDVYDMTQAVADGSTVKIYYESRVIPLNLPQNLDLDEAYNDITEDQEEDVKQRLKSKWSRIEALAGAKPRVEALAKDIIQHFETRQQAMKGKGMIVTMSRRIAVDLYDEIVRLKPEWHSDDDDKGVIKVVMTGSSSDPTSFQRHIGPKKRRNLLEKRMKDVNDELQLVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTESDQAQTAIDTDKAVELMLLKYDVIQDMLYNLDYSKFNSDKKSERYYTISNTMDYVIGLGEDERQRFIKTVTELGKAFALCATESTAQELNDEIAFFKAVKAGLVKLLQPPKEGKTRKTPAEVEADINQLVSQSVVTEDVIDVYQTLGLEQPDLSILSDDFLKEVEGLKQKNVAVELLNRLLKGQVKSLMKTNATVSKRFSEMLGNSINKYNSRSIETSKVIEELIQLAKDIKQEQQRGNELGLNSDEIAFYDALASHETAKEAMGDKELRAIAHELTKTVKENMGVDWSKRDSAKAKMRVAVRRLLKKYGYPPDLQKMAVEQVVEQAELMASNK
>NZ_LR735437.1|WP_002469407.1|82858_84178_+|accessory-Sec-system-glycosylation-chaperone-GtfB
MINLYDNLNSQTLQLYKTFINANIKSTTVVVNDNGFLPSDVLSPYKFFSGNSIENERPLYFNDVPVPKYWEIEGSNQSAVIKDKDKIRGKILYQKGYRNRVVASVEWFNKKEHVQFIDYYNQHGFRYAQLVMDDNQNQIMKRYFDQNNNEFLVENLVTKDLILRWNNKDIFFDNRISFLSFFFEKANLSIKDIVLNSFATSFLFLYRQRDFNMKCRIFWQEKIKDDLPENMKIALKNIDNLKILIPDKKEYYRVMDSVETSYRHKIENSGYVYEFLKVNKYNNEALIITNSDNIPYVEYIARENQNVTFHIASKTEMSSRLLQLDGIQNINLYPKSTEETILNLCCKCDIYLDINKGKEIFESMYLAFAHEMIIIAFEETIHNRQFVHSSNIYKLDNYYDLSNAINQISNDKTLFSDRLNMQLRSANSVSIESFLNKMK
>NZ_LR735437.1|WP_001551920.1|81357_82866_+|accessory-Sec-system-glycosyltransferase-GtfA
MTIYNLNFGIGWASSGVEYAQLYRRNILHDLNEDFKFIFLDFINKENIQTLTSNLGIENDEVIWIYQYFTDIKIKPTSYTIENIIEKLESNDVKVKSIKPKVKRIYFNNKSCYVNCYLKYKNEDIVDRAEFVSSGKLIRKEFYTYTKVFTEYYAPYNKKAKVYLRKFFNENGSVAYEEIVKDDDNMYIFPNKILYSKKEFIGYFISQLNLKDKDILLVDRSKNIGQVILENKKEGHVGVVIHAEHYNHSNTNDQYVLWNNNYEYVFNNAQHIDFFIVATEDQKAVLQLQFEKYKNLKPKIYTIPVGNIKYLKFEQQRKPFSVITASRLANEKHVDWLIKAVIKAHKINDDIRFDIYGEGSERQKLQQIIDNYQANNYIHLKGHMDLTYIYKSYELYLSGSTSEGFGLTLMEAVGSGLGIIGLDVYYGNTTFIKNNVNGYRVPIDITNLDEDTLITELTSKLLLFFTQDNEKTRAESYKIANNYLIGNIKEKWKNLIDEVLND
>NZ_LR735437.1|WP_155976019.1|77945_81269_+|MSCRAMM-family-cell-wall-anchored-protein-SesJ
MKKKLDFIPNKLNKFSIRRFTVGTASILVGSTLLFGIGNEAHAAEKNQELNTTANVADSDVGEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEETPSNEATNEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEKSTDNSTSNPEVDSEVLDNSKQGTDNDNSSNHSEDNIVTYAEPTALTNTRSVDSPSRVSSDNSQAQKQGKNVNDSIKVNSVDTDKEYVEPNNGQGFSTNVSFEVDGKVNKGDYFTVDMPEYADFNGIADYKAANNKIYPTINDGEQVVANGVYDTETKKLVYTFTDYVNKKDNIKGQFEIPQFIDRKNAKTSGDYDLNYNIADKTVSKPMKIVYNNYDEGHVVANTSSLITKADLFNVGSHDYTQYIYVNPKSEDSYNTRLTIQGYQEDLNNSSTLLNPKDSNIEILDAKSSDNITPSFYVNDSDFENVTNQYKIDQIGDKKAQIDFGHIDHPYIVKVTSKIDPNSSKDLRTRVIMENENAEGTKDFYVHDNTVERLGANGVATGNEKLYNLGDYVWEDTNKNGIQDEDEHGIEGVEVSLTRPNGTVETTTTNSEGKYEFNDLQNGDYVINFKTPEGYTATKAYEGNNAEVDSNGLSTVGTIKDVDNWTLDSGFYKTPSKYSLGDYVWYDSNKDGYQDNDEKGIKGVKVTLKDSEGNTLKTTETDENGKYRFDDLDSGDYTVHFDKPEGLTQTSVNSGNDDAKDADGEDVHVTITDHDDFTIDNGYFEDSESDSSSESESDSESHSDSESHSDSESTSESDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESHSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESDSESHSDSESDSDSESTSESGSESHSNSELPDTGEEDNHQGLIGGVLAAFGGLTLLGRRRKKEEK
>NZ_LR735437.1|WP_002467980.1|77466_77700_-|hypothetical-protein
MEHINKDKNDEKSKELDKRLGINGYYKTDLDLEIEKELLESPNESSSSVAKRIRIISMIPLIILLILAFIRIIRTFI
>NZ_LR735437.1|WP_002469297.1|75584_76214_+|hypothetical-protein
MNLRGHENRLKFLAKYDVTPISHLKLLEGQKKDGEGGILTDSYYCFSYSLKGNSKKVLGTFNCGYHIAEDLLKLSNQDKLPLFNPFKVINEGNQLQGVTNKGNLNINRQRKQYNEVALQLSNAINLIIICYEGNIKEPLSTIKYETDKYYYSEPYDSKIKAVNTIIGNLFDKKLVEKISEINVNQKIRKFDFSLLTNKIKKYNIQNNFE
>NZ_LR735437.1|WP_001830703.1|94044_94200_+|hypothetical-protein
MTASNAPDIGISIMKEQDYHLENVTFKKIEDKVNHSVSFYVNKGSVAKLNL
>NZ_LR735437.1|WP_099797811.1|94985_95051_-|epsilon-family-phenol-soluble-modulin
MFIINLVKKAIGFFKNLFGNK
>NZ_LR735437.1|WP_001830710.1|95505_96219_-|response-regulator-transcription-factor
MTTTLLVIEDDDAISHLIDVALTMNYYKVIKAKVGKEANFRIRTEHPDIILLDLGLPDIDGLKLIQQIREYVDTPIIVISARTEEETIVKALDYGANDYMTKPFNIDELKARIRVALRVTKKLDTVQDNFENGPLKIDFNAKMVYINNQSIHLTPYEFQLLDILSQHVGKVLTYQILLKALFGYVNKCEMASLRVHMASLRKKLNYSDKHEDGSLCSKDKKLIITHPRIGYQMQHIG
>NZ_LR735437.1|WP_001830698.1|96223_98878_-|sensor-histidine-kinase-KdpD
MESSHKYRGKLTIYLGYSPGVGKTYEMLSNAINLYKEGVDIKIGYIEPHQRPETNALAKHLPEIVTSSRKFGSHLFHFIDVNQIIEAHPDIVLIDELAHTNISKTRHIKRYMDIEEILSHGIDVWTTLNIQHIESLSGQIALMTGIQVKERVPDQFIMSADAYEVVDISPKMLIQRLKAGKVYKKERLDTAFSNFFTYENLTELRELTLRTVADIMSQKEQQYKKKHIDVTPHIAVAVSGSIYNERVIREARRAAYREHAKFTAIYIDTFETRSESRKQDHYIHKNLTLAKSLGAEIKVLYAQDIAKTLINWCDKSLVTKLVLGQSEQPRWKEYFKKSLIEQINHTPHHFKLEIVPIHHIYSNKQNRERSNRKKDKQPYQLALSVDIVKMLIIQIVCVLIGMWIYNMDKNESSAIILLLFFIGIIVLSICTQSYLIGFFASILNVFVFNYFFTVPRFTLEMYRFEYPITFVTSIFASIFTSGILKNLKYQHSLTERQLYRTDVMLQFNQSIKESYSIMKLLTIAGEQIHQLLKQDVTIFQIKSKKVKQSASFGSSTGMHSHETEDAETLSWVIENESRAGRLTDTFPGSKFLCVPIGTRPVKGIVLIQFTDEDYIDTYDSFILDSMLNDLTLAVENVALLRQTRQSMVIAEREATRSNFLHSISHDIRTPLTSIIGNLDMVKHHGDGLDCKERAHLLSASYEEAQYLYTLVTNILSLTKLESSDIQIKRTPYLVDELLEEFEAGLVRRHQQQKVNIEDDDTLALVQIDSKLILQVLFNLVDNALKHAESRSKIILRVNEQRSQILFEMIDDGRGIPDEERDLIFNPYYSGDYFKDNKKYSLGLGLYLVQLILKQHGSQLKYRPNHPQGSIFYFYLDITQIEMEG
>NZ_LR735437.1|WP_001830720.1|99044_99125_+|potassium-transporting-ATPase-subunit-F
MITLLSLVVIGLILFLFYALLWSEKF
>NZ_LR735437.1|WP_002505145.1|99145_100828_+|potassium-transporting-ATPase-subunit-A
MSIILFLITFIAVSYVMSRYLYTVALLVPSKMDVVFSPIERGLYKLIGTQLEHMSGKTYLKHFLCFNGLTGALAFLLLLAQQWLWLNPNHNLNQSIALAFNTMASFVTNTNLQHYTGETGLTYFTQMGVITCLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDVVRFIIRVLLPLSFIISIFLISQGTPQTLNGNLVVETLSGVKQTIAYGPMASLEAIKHLGTNGGGFLGGNSSTPFENPTYWSNFVEALCMMLIPGSLVLLFGRMLKTKNHIHSHALMIFIAMFTIFIVFLLICLHFESIGNPVLHHLGIDGGNMEGKETRFGIGQSALFTTITTAFTTGSVNSMHDSLTPLGGIVPMVLMMLNAVFGGEGVGLMNMLIYVMLTVFICSLMIGKTPTYLGMKIESQEMKWIALTFLVHPLLILIFSALAFIVPGAKDALTNPQFHGVSQVLYEFSSSSANNGSGFEGLKDNTVFWNVSTAIVMLLARYIPIVLQLMIVSSLVNKKTYQHTQHIQDVPISNVFFSMILIIFIILLSGLTFLPDLMLGPIGEHLLLNP
>NZ_LR735437.1|WP_032601514.1|100846_102868_+|K(+)-transporting-ATPase-subunit-B
MMETSKIFESSLVKQALKESIVKLNPTYMIKNPIMFVVEIGMLLSFVLTFIPNLFIQEHVSRIYVLSIFIILLLTLIFANFSEALAEGRGKAQANALRQTQTEMTARLIKEDGSYETIDASDLKKGDIVRVETGEQIPNDGQVIKGIATVDESAITGESAPVIKESGGDFNNVIGGTTVASDWLEIEIMSEPGQSFLNKMIHLVEGATRKKTPNEIALFTLLMTLTIIFLVVIMAMYPLAQFLHFNLSIVMLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVESCGDVNVLILDKTGTITYGNRMADAFIPVATTSYERLVRASYESSIEDDTPEGSSIVKLARAQGINLPQRTGEYYPFTAETRMSGAKFDDYEVYKGAPNSMIKRVKEAGGVIPEDLDECVTEVSRKGGTPLVVIEDNNILGVIYLKDVIKEGLVERFQELRVMGIETVMCTGDNALTAATIAKEAGVDRFIAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTTSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMSAMPAMNQLNIMHLHSPESAVLSALIFNALIIVLLIPIAMAGVQFKGASTQTILMKNMLIYGIGGMIVPFVGIKLIDLAIQFFI
>NZ_LR735437.1|WP_001830712.1|102882_103443_+|K(+)-transporting-ATPase-subunit-C
MATIRKSVGLLIIVFVLCGFIFPLTVTAIGQVIFPHQANGSLIKQDGKVIGSELIGQQWTATKYFHGRISAVNYNMNGQQLKANKGPASGGSNLANSNPLLKQRVEDIISKEDKRPTVNAVTASGSGLDPDISISNAHAQVKRIAEARNIKASTVEQIIQQYKQSSPMTEDYVNVLKMNLALDKVK
>NZ_LR735437.1|WP_001830719.1|103751_104093_-|hypothetical-protein
MKNILKLIFLFLISLIPIEFIGLMTDYQTGLLLGYLPFIIVTIILGYLTRSFILYFLVFVSRILGTFIFVICANLCLNFYEVDFYFKPFDVLGFVVFLSILSQLMILITIGLV
>NZ_LR735437.1|WP_000036757.1|105949_106879_-|carbamate-kinase
MSKIVVALGGNALGQSPKEQLDLLKSTSKSLVSLIDKGYEIVISHGNGPQVGSINLGLNYAAEHKQGPPFPFPECGAMSQAYIGYQMQESLQNELHSMGIDKQVVTLVTQVQVASDDSAFNNPTKPIGLFYTKEQADKFTKEKGYTFVEDSGRGYRRVVPSPQPISIVELDSIETLITHGTLVIAAGGGGIPVIKENEVYTGVDAVIDKDKTSALLAAHLQSDQLIILTAVDHVYINYGKENQRGLDEVSVDEMKKHISDGQFAKGSMLPKVEAALQFLEKNTKGSVLITSLAGLGDALDGKIGTLIKN

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Crispr_ID: NZ_LR735437_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_2

121626-122302

TypeIII

Consensus_repeat	Method
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	PILER-CR
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	CRISPRCasFinder
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	CRT

9 spacers

cas1,cas2,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csm6,cas6

The CRISPR arrays of NZ_LR735437_2

>merge|NZ_LR735437|2|121626-122302|PILER-CR,CRISPRCasFinder,CRT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAACACCATATTGTCGCTTAGTATTCATAGCAAATTTTGGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACAATATAAGCGTAAAAAGTATTGTCTTTATATTGACTGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACTTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGCGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACGGTGCCAACCTGTGCCCCCTAAATCATTTCTGTAGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACCATTTCAATCATATCCTTTTTAATAATTTTTTTATGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACTGTTCGTCTATGCCGTCATAATGTAAATCACTTACTAGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACTTCAATAGCCCAATTAATAACATCTTTCTTCAGTGATCGATAACCACCCCGAAGAAAAGGGGACGAGAACTTAACTTCATTTTCACGACCTACTAATGGACCTTGGATCGATAACCACCCCGAAGAAAAGGGGACGAGAATACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAGGATCGATAACTACCCCGAAGAAAAGGGGGCAGAGTG

>NZ_LR735437|2|1|121626-122231|PILER-CR
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	ACCATATTGTCGCTTAGTATTCATAGCAAATTTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGC
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	GGTGCCAACCTGTGCCCCCTAAATCATTTCTGTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	CATTTCAATCATATCCTTTTTAATAATTTTTTTAT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCAATAGCCCAATTAATAACATCTTTCTTCAGT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTAACTTCATTTTCACGACCTACTAATGGACCTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAT

>NZ_LR735437|2|2|121626-122302|CRISPRCasFinder
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	ACCATATTGTCGCTTAGTATTCATAGCAAATTTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGC
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	GGTGCCAACCTGTGCCCCCTAAATCATTTCTGTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	CATTTCAATCATATCCTTTTTAATAATTTTTTTAT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCAATAGCCCAATTAATAACATCTTTCTTCAGT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTAACTTCATTTTCACGACCTACTAATGGACCTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAT	ACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAG
GATCGATAACTACCCCGAAGAAAAGGGGGCAGAGTG

>NZ_LR735437|2|2|121626-122302|CRT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	ACCATATTGTCGCTTAGTATTCATAGCAAATTTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGC
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	GGTGCCAACCTGTGCCCCCTAAATCATTTCTGTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	CATTTCAATCATATCCTTTTTAATAATTTTTTTAT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTCAATAGCCCAATTAATAACATCTTTCTTCAGT
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	TTAACTTCATTTTCACGACCTACTAATGGACCTTG
GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAT	ACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAG
GATCGATAACTACCCCGAAGAAAAGGGGGCAGAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_000249804.1\|110172_111408_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_LR735437.1\|WP_000711814.1\|111676_112123_-\|ArgR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224355
NZ_LR735437.1\|WP_000272781.1\|107934_108624_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_LR735437.1\|WP_002469408.1\|131850_132708_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_LR735437.1\|WP_002469402.1\|117139_117907_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_LR735437.1\|WP_000344142.1\|108665_110087_-\|arginine-ornithine-antiporter	unknown	unknown	gnl\|CDD\|163522
NZ_LR735437.1\|WP_002469397.1\|130156_130891_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_LR735437.1\|WP_002469417.1\|114627_116181_+\|nickel-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173854
NZ_LR735437.1\|WP_002469413.1\|122377_123283_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_LR735437.1\|WP_002470063.1\|127869_128892_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_LR735437.1\|WP_002467620.1\|116183_117140_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_LR735437.1\|WP_002469398.1\|117873_118641_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_LR735437.1\|WP_002469412.1\|126958_127867_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_LR735437.1\|WP_002469399.1\|123282_123588_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_LR735437.1\|WP_002469401.1\|126303_126948_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_LR735437.1\|WP_002469393.1\|123600_125874_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_LR735437.1\|WP_002470067.1\|125876_126302_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|273844
NZ_LR735437.1\|WP_002469410.1\|118633_119269_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224049
NZ_LR735437.1\|WP_002469411.1\|128891_130160_+\|type-III-A-CRISPR-associated-protein-Csm6	csm6	cd09699_csm6_CAS-III-A	gnl\|CDD\|131720
NZ_LR735437.1\|WP_002467668.1\|113938_114631_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_000249804.1\|110172_111408_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_LR735437.1\|WP_000711814.1\|111676_112123_-\|ArgR-family-transcriptional-regulator	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.21299e-35
NZ_LR735437.1\|WP_000272781.1\|107934_108624_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.25689e-21
NZ_LR735437.1\|WP_002469408.1\|131850_132708_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	4.72494e-46
NZ_LR735437.1\|WP_002469402.1\|117139_117907_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.20161e-56
NZ_LR735437.1\|WP_000344142.1\|108665_110087_-\|arginine-ornithine-antiporter	gnl\|CDD\|163522	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_LR735437.1\|WP_002469397.1\|130156_130891_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.05435e-16
NZ_LR735437.1\|WP_002469417.1\|114627_116181_+\|nickel-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173854	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel transport system, which functions in the import of nickel and in the control of chemotactic response away from nickel. The ATP-binding cassette (ABC) type nickel transport system is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, the initial nickel receptor. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.18554e-168
NZ_LR735437.1\|WP_002469413.1\|122377_123283_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.17186e-120
NZ_LR735437.1\|WP_002470063.1\|127869_128892_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	3.88064e-17
NZ_LR735437.1\|WP_002467620.1\|116183_117140_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.3251e-61
NZ_LR735437.1\|WP_002469398.1\|117873_118641_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.15728e-57
NZ_LR735437.1\|WP_002469412.1\|126958_127867_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.87464e-38
NZ_LR735437.1\|WP_002469399.1\|123282_123588_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	9.63007e-26
NZ_LR735437.1\|WP_002469401.1\|126303_126948_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.35084e-106
NZ_LR735437.1\|WP_002469393.1\|123600_125874_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_LR735437.1\|WP_002470067.1\|125876_126302_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|273844	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2. These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This model represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2.	3.92956e-21
NZ_LR735437.1\|WP_002469410.1\|118633_119269_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.15384e-45
NZ_LR735437.1\|WP_002469411.1\|128891_130160_+\|type-III-A-CRISPR-associated-protein-Csm6	gnl\|CDD\|131720	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.	1.49164e-175
NZ_LR735437.1\|WP_002467668.1\|113938_114631_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.18221e-12

>NZ_LR735437.1|WP_002469410.1|118633_119269_+|ATP-binding-cassette-domain-containing-protein
MLKIERLTKYIDTQLIFKEISCTLNDQHLLISGESGCGKSTLAKIIAGLDTDYQGELYLNGRLRESYTSKEWMKHIQYVPQYQRDTLNQRKTVLATLLEPLKNYKLNKQRYTSSIEAVLDQCNLPHDILNQKVSTLSGGQFQRVWIAKALILEPEILILDEATTNLDVINEEAILQMLISLKMTQLIIISHDTYILSQFEGIQLQLNKLNN
>NZ_LR735437.1|WP_002469398.1|117873_118641_+|ABC-transporter-ATP-binding-protein
MSNHQQKNNAVNTVVNVNKLSILDQEKVLLKDVDLTVTKGSFHCIIGESGSGKSLLTRTILGMKRPQLCYQGDIDIDLTKTDAVFQDVQSNMFQNITLVKHFQYIYEANRTHLTKQCIKEDVLQMMQLLGLRQGEHLLERYPFELSGGMAQRVAFIMSLIRRPDYLFLDEPTSALDQGNVKRFMHYLLKAQERYQMTIVFITHDINLVKDFATHISIMQQGQLIESGEAASILTKPIHSYTKKLITIAHRRQLYA
>NZ_LR735437.1|WP_002469402.1|117139_117907_+|ABC-transporter-permease
MKKYQTYIAIGSLLSLMVVLITYGLMQDTQHLNPLESLNGQHWLGTDQLGRDFLVRLIVGSLVTLSLTGIVILLSVCMGLIFGLIAGIERRWLDQIIMFVADMLLAIPSFIIALVILSLVSNSMIGLILALTIGWIGRYLRYFRNLTRDIQKRPFVQYARLSGNSTFKTTLTHVIPHLLSNIFALVTADFGKMMLSISGLAFLGLGIKPPTPELGTILFDGKSYFNGAPWLFFFPGVLLGGFALLCQIINKKITQ
>NZ_LR735437.1|WP_002467620.1|116183_117140_+|ABC-transporter-permease
MLKRTIKFILYLIVSSFIIFILVEKTSGNPAILYLQRHGYTSITQDNIEAAQHKLGLGQHVLLRYIDWVGHALTGNLGYSFSTNETVTAMIMEAIMPTLVLIIVSSCIMLPFGYIVGYFVGTRPHTRYANGIRGFAQVMTSMPEYWLAILFIYYLGVRWQLLPFVGSDSWQHFVLPIFTIVIIEGCHILLMTAHLIAQTLDQDAYQLAQLRHFSLKARIIVQIKEIFAPLMTISINSIIHLIGKAVILEVIFSMSGIGKLLINAINQRDYPLIQGIVIFIIVFIMLMNYLGDVIILKNEPRLRRRHTQQSGNEKRGAM
>NZ_LR735437.1|WP_002469417.1|114627_116181_+|nickel-ABC-transporter-substrate-binding-protein
MKKRVLMTVAASATLLLAGCGNGQKEDKDVTVSLPTEAKADKLDAQGYDATMPVYSAVYDALVKYDKDKGIKAGLADKWSVDESGKVYEFHLKKNVKFSDGSALDAKDVKFSIDRAKAMNKNTTVETLKKLDKVVVKNEHVVQIRLKSPSNQVLNELTQVRPLRIMSPHSVEDGKVNGKFEKAIGTGAFVVDKTGKEKTTMKPNKYFDNGHPVNYHLAFQTIEDGDSRNSAVQSGSVDISGGALGMLSDEQIKQDKKNKNLTIEDRPSTVSHFMAFNPKNDVLNQRTIREAISKSIDAKDIAGKSVNGLFQKNVQFVTKNNQQPHDYDMKAAERLLKSERYHKNDDGIFEKNGKPLSFNLVIQTAEFPNWKDKAEKVQRQLKQAGIKLNVKTLDSQSYYDTLWTKKDYDLIFYRTYSDALMPYNFMSSVFKNNDGQPGVLADDETLTKQLDNFPSTVSKEGQKRSFDDIFKHFNQQYYGVPIAYPNETFVVSDKVKQFKFSGLTDAPIDYKALKVNE
>NZ_LR735437.1|WP_002467668.1|113938_114631_+|class-I-SAM-dependent-methyltransferase
MTKTYDVWWQKGQESDDDMARDHQEAWERTIEMLDTSDIEGKTILDVGCNQGGFLRRLYDTTPFKEGVGIDLARLSLEKAETLKGQRPLTYYLTDKPQETKHMFDTAVSTSVLYLIEDIPQHVKDLKEVLKPGGVYYASFADLTNNPSRQFMDDTINQYGATPSQNHSLKHIVDSFVDAGFEVAVMKEPVPDVIDLTHYSDFYLSPNDYLQTLYEESFLIKASVKDGTEK
>NZ_LR735437.1|WP_000711814.1|111676_112123_-|ArgR-family-transcriptional-regulator
MKKEKRLNLILTVIQQNQFNKKQQIVDYMARHFGVYYSLTTISRDLQELEIYKIPVENKKYIYKKINQTNQLSAKKQLEIFSDEIIEFITLNNYVLIKTSPGFAQSISYYIDQLQMKEILGIIGGNDTLMILTSSNEIAEFVCYQLFP
>NZ_LR735437.1|WP_000249804.1|110172_111408_-|arginine-deiminase
MVQGPIQVNSEIGKLKTVLLKRPGKELENLVPDHLSGLLFDDIPYLKVAQEEHDKFAQTLRDEGIEVVYLEKLAAESITEPEVRENFINDILTESKKTILGHETEIKEFFSKLSDQELVNKIMAGVRKEEIQLETTHLVEYMDDRYPFYLDPMPNLYFTRDPQASIGRGMTINRMYWRARRRESIFMTYILKHHPRFKDKDVPVWLDRNSPFNIEGGDELVLSKDVLAIGISERTSAQAIEKLARNIFKDANTSFKKIVAIEIPNTRTFMHLDTVLTMIDYDKFTVHAAIFKEENNMNIFTIEQNDGKDDIKITRSSKLRETLAEVLEVEKVDFIPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNQLLRDKGIKVIEITGSELVRGRGGPRCMSQPLFREDI
>NZ_LR735437.1|WP_000344142.1|108665_110087_-|arginine-ornithine-antiporter
MDENKLGKTSLIGLVIGSMIGGGAFNIISDMGGQAGGLAIIIGWIITAIGMISLAFVFQNLTNERPDLDGGIYSYAQTGFGDFIGFSSAWGYWFAAFLGNVAYATLLMSAVGNFFPIFKGGNTLPSIIIASILLWGVHFLILRGVETAAFINSIVTVAKLIPIFLVIICMIVVFNFSTFKSGFYGMTSGSVGVFSWGDTMAQVKSTMLVTVWVFTGIEGAVVFSGRAKSKKDVGTATVIGLISVLVIYFLMTVLAQGVIQQNQISKLANPSMAQVLEHIVGHWGSVLVNIGLIISVLGAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNKAPVNALIITNILVQLFLISMLFTDSAYQFAFSLASSAILIPYTLSAFYQVKYTIQNKSKANLKQWIIGIIASIYTIWLVYAAGLDYLLLTMLLYIPGLLVYSYVQRDNNKHLTKLDYTLFIFIIVLAIIGIVRLITGNISVF
>NZ_LR735437.1|WP_000272781.1|107934_108624_-|Crp/Fnr-family-transcriptional-regulator
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKFVYFLVNGCILHESSNITGDNYLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPKDLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSAKERIERILQILCLSIGDDNGEFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK
>NZ_LR735437.1|WP_002469413.1|122377_123283_+|type-II-CRISPR-associated-endonuclease-Cas1
MKDVIYVENHYFVTAKENSIKFRNVIDKSEKFYLFEEIEAIIFDHYKSYFSHKLVIKCIENDIAIIFCDKKHSPVTQLISSYGMVNRLKRIQSQFQLSGRTKDRIWKKIVVNKIFNQTRCLENNLHNENVKLMLGFAKEVSSGDKSNKEAHAARIYFKDLFGKQFKRGRYNDVINSGLNYGYSILRSFINKELAIHGFEMSLGIKHQSKENPFNLADDIIEVFRPFVDNIVYEIVFKKNIDTFDINEKKLLLNVLYERCIIDKKVVRLLDSVKIVIQSLIRCYEENTPTYLLLPKMIEVGN
>NZ_LR735437.1|WP_002469399.1|123282_123588_+|CRISPR-associated-endonuclease-Cas2
MYLLVSFDLPRDTKLERRIASKYRLRLIELGFSMKQFSLYERYVSNVQKKDKILEILKQEIPDTGSITLYILPDEVNSNQITILGKEVKLAVNKEPKLIFI
>NZ_LR735437.1|WP_002469393.1|123600_125874_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNKKNILMYGSLLHDIGKIIYRSGDHTFSRGTHSKLGHQFLSQFSEFKDNEVLDNVAYHHYKELSKANLDNDNTAYITYIADNIASGIDRRDIIEEGDEEYEKQLFNFDKYTPLYSVFNIVNSEKLKQTNGKFKFSNESNIEYPKTENIQYSSGNYTTLMKDMSHDLEHKLSIKEGTFPSLLQWTESLWQYVPSSTNKNQLIDISLYDHSRITCAIASCIFDYLNENNIHNYKDELFSKYENTKSFYQKEAFLLLSMDMSGIQDFIYNISGSKALKSLRSRSFYLELMLEVIVDQLLERLELTRANLLYTGGGHAYLLVSNTDKLKKKITQFNNELKKWFMSEFTTDLSLSMAFEKCSGDDLMNTSGNYRTIWRNVSSKLSDIKAHKYSAEDILKLNHFHSYGDRECKECLRSDIDINDDGLCSICEGIINISNDLRDKSFFVLSETGKLKMPFNKFISVIDYEEAEMLVQNNNQVRIYSKNKPYIGIGISTNLWMCDYDYASQNQDMREKGIGSYVDREEGVKRLGVVRADIDNLGATFISGIPEKYNSISRTATLSRQLSLFFKYELNHLLENYQITAIYSGGDDLFLIGAWDDIIEASIYINDKFKEFTLDKLTLSAGVGMFSGKYPVSKMAFETGRLEEAAKTGEKNQISLWLQEKVYNWDEFKKNILEEKLLVLQQGFSQTDEHGKAFIYKMLALLRNNEAINIARLAYLLARSKMNEDFTSKIFNWAQNDKDKNQLITALEYYIYQIREAD
>NZ_LR735437.1|WP_002470067.1|125876_126302_+|type-III-A-CRISPR-associated-protein-Csm2
MILAKTKSGKTIDLTFAHEVVKSNVKNVKDRKGKEKQILFNGLTTSKLRNLMEQVNRLYTIAFNSNEDQLNEEFIDELEYLKIKFYYEAGREKSVDEFLKKTLMFPIIDRVIKKESKKFFLDYCKYFEALVAYAKYYQKED
>NZ_LR735437.1|WP_002469401.1|126303_126948_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYSKIKISGTIEVVTGLHIGGGGESSMIGAIDSPVVRDLQTKLPIIPGSSIKGKMRSLLAKHFGLKMKQESHNQDDERVLRLFGSSEKGNIQRARLQISDAFFSEKTKEHFAQNDIAYTETKFENTINRLTAVANPRQIERVTRGSEFDYVFIYNVDEESQVEDDFENIEKAIHLLENDYLGGGGTRGNGRIQFKDTNIETVVGEYDSTNLKIK
>NZ_LR735437.1|WP_002469412.1|126958_127867_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MATKVFKLSFKTPVHFGKKRLSDGEMTITADTLFSALFIETLQLGKDTDWLLNDLIISDTFPYENELYYLPKPLIKIDSKEEDNHKAFKKLKYVPVHHYNQYLNGELSAEDATDLNDIFNIGYFSLQTKVSLIAQETDSSADSEPYSVGTFTFEPEAGLYFIAKGSEETLDHLNNIMTALQYSGLGGKRNAGYGQFEYEIINNQQLSKLLNQNGKHSILLSTAMAKKEEIESALKEARYILTKRSGFIQSTNYSEMLVKKSDFYSFSSGSVFKNIFDGDIFNVGHNGKHPVYRYAKPLWLEV
>NZ_LR735437.1|WP_002470063.1|127869_128892_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MTIKNYEVVVKTLGPVHIGSGQVMKKQDYIYDFYNSKVYMINGNKLVKFLKRKNLLHTYQNFLRYPPKNPRENGLKDYLDAQNVKQSEWEAFVSYSEKVNQGKKYGNVRPKPLNDLHLMVRDGQNKVYLPGSSIKGAIKTTLVSKYNNEKNKDIYSKIKVSDSKPIDESNLAIYQKIDINKSEKPMPLYRECVDVNTEIKFKLTIEDEIYSINEIEQSIRDFYKNYYDKWLVGFKETKGGRRFALEGGIPDVLNQNILFLGAGTGFVSKTTHYQLKNRKQAKQDSFEILTKKFRGTYGKMKEIPSNVPVALKGTTNQSRHTSYQQGMCKVSFQELNNEVL
>NZ_LR735437.1|WP_002469411.1|128891_130160_+|type-III-A-CRISPR-associated-protein-Csm6
MKVLFSPIGNSDPWRNDRDGAMLHIVRHYNLDKVVLYFTRTIWEGNENRKGHKIYEWEKIIQTVSPNTEVEIIIENVDNAQDYDVFKEKFHKYLKIIEDSYEDCEIILNVTSGTPQMESTLCLEYIVYPENKKCIQVSTPTKDSNAGIEYSNPKDKVEEFEIVNEVEKKSEKRCKEINILSFREAMIRSQILGLIDNYDYEGALNLVSNQKSFRNGKLLRKKLLSLTKQIKTHEVFPEINEKYRDDALKKSLFHYLLLYMRYNRHDVAETLIRVKSIAEFILKTYIEIHWPTLIIEKDDKPYLNDEDNLSFVDKYKLLLGKRNQNFDVSRILGLPAFIDILTILEPNSKLLKEVNAVNDINGLRNSIAHNLDTLNLDKNKNYKKIMLSVEAIKNMLHISFPEIEEEDYNYFKEKNKEFKELL
>NZ_LR735437.1|WP_002469397.1|130156_130891_+|CRISPR-associated-endoribonuclease-Cas6
MINKITVELDLPDNIRFQYLGSILHGVLMDYLPNDIADQLHHEFAYSPLKQRIYYKSKKVIWEIVCMSDNLFKEIVKLFSSKNSLLLKYYQTNIDIQSFQIEKINVQNIMNQLLQTEDLNRYVRLNIQTPMSFKYQSSYMIFPDVKRFFRSIMIQFDAFFEEYKMYDKETLDFLMKNVNIVDYKLKSTRFNLEKVKIPSFTGEMVFKIKGPLPFLQLTHFLLKFGEFSGSGMKTSLGMGKYSII
>NZ_LR735437.1|WP_002469408.1|131850_132708_+|GIY-YIG-nuclease-family-protein
MIELNKFIKVPDLNKTKIKFNMNAGNVEIRAWDLLFKEDETEWEQINAWKTKHPNNNLNHADYLLAFAQYYPYGPEYFIFGGLYKIKKIEPEVFDEVGYELTLMDDYKEYRKRLIVKLKKPIGRDLYNRLYKNIQDTLEPEVYEIAPNTKLGHFPGYQNVTLSHPQMQQIISRNEPSWKQALMNVKGVYVITDLSNGKLYIGSASGNTDGIWQRWSDYANIENLTGGNKLLNEIKLDKGKDYIVNNFQYSILEIFDTKTKADIIINRENYWKNVFCTRKYGMNYN

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Crispr_ID: NZ_LR735437_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_3

131023-131347

TypeIII

Consensus_repeat	Method
ATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACA	CRISPRCasFinder

4 spacers

cas6,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas2,cas1

The CRISPR arrays of NZ_LR735437_3

>merge|NZ_LR735437|3|131023-131347|CRISPRCasFinder
ATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACAAGCAACTAGCTCATCGTTTTCCGTAGCAAATTCAAATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACAGATTAAAACTATCCAAACCCACACCGGCACATCTAAATTCGATAACCACCCCGCATAAAAGGGGACGAGAACTCATTTCTATCCATTCAATATAAGTTTCACGTTGAAATTCGATAACACCCCGCATAAAAGGGGACGAGAACTCAATAAGCCACGAATTAATGTATACGATATCTCTAATTCGATAACCACTCCGCAAAAAAGGGGACGAGTATT

>NZ_LR735437|3|3|131023-131347|CRISPRCasFinder
ATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACA	AGCAACTAGCTCATCGTTTTCCGTAGCAAATTCAA
ATTCGCTAACCACCCCGCCGAAAAGGGGACGAGAACA	GATTAAAACTATCCAAACCCACACCGGCACATCTAA
ATTCGATAACCACCCCGCATAAAAGGGGACGAGAACT	CATTTCTATCCATTCAATATAAGTTTCACGTTGA
AATTCGATAACACCCCGCATAAAAGGGGACGAGAACT	CAATAAGCCACGAATTAATGTATACGATATCTCTA
ATTCGATAACCACTCCGCAAAAAAGGGGACGAGTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_002469399.1\|123282_123588_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09638_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_LR735437.1\|WP_002469405.1\|134891_135797_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_LR735437.1\|WP_002469423.1\|138203_139295_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR735437.1\|WP_002469411.1\|128891_130160_+\|type-III-A-CRISPR-associated-protein-Csm6	csm6	cd09699_csm6_CAS-III-A	gnl\|CDD\|131720
NZ_LR735437.1\|WP_002469424.1\|135771_136893_+\|ABC-transporter-permease	unknown	unknown	unknown
NZ_LR735437.1\|WP_002469397.1\|130156_130891_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_LR735437.1\|WP_002469394.1\|136858_137470_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002469413.1\|122377_123283_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_LR735437.1\|WP_002470063.1\|127869_128892_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_LR735437.1\|WP_002469387.1\|140228_141590_+\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_LR735437.1\|WP_002470067.1\|125876_126302_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl\|CDD\|273844
NZ_LR735437.1\|WP_002469422.1\|142133_142619_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002469395.1\|134111_134720_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275338
NZ_LR735437.1\|WP_002505142.1\|133141_133915_+\|tandem-type-lipoprotein	unknown	unknown	gnl\|CDD\|367972
NZ_LR735437.1\|WP_002458482.1\|137550_138216_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LR735437.1\|WP_002469401.1\|126303_126948_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_LR735437.1\|WP_002469393.1\|123600_125874_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_LR735437.1\|WP_002469408.1\|131850_132708_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_LR735437.1\|WP_002469410.1\|118633_119269_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224049
NZ_LR735437.1\|WP_002469412.1\|126958_127867_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|273866

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_002469399.1\|123282_123588_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	9.63007e-26
NZ_LR735437.1\|WP_002469405.1\|134891_135797_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.66913e-118
NZ_LR735437.1\|WP_002469423.1\|138203_139295_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.77551e-15
NZ_LR735437.1\|WP_002469411.1\|128891_130160_+\|type-III-A-CRISPR-associated-protein-Csm6	gnl\|CDD\|131720	TIGR02672, hypothetical_protein_SERP2456, CRISPR type III-A/MTUBE-associated protein Csm6. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.	1.49164e-175
NZ_LR735437.1\|WP_002469387.1\|140228_141590_+\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.66698e-112
NZ_LR735437.1\|WP_002469397.1\|130156_130891_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	8.05435e-16
NZ_LR735437.1\|WP_002469413.1\|122377_123283_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.17186e-120
NZ_LR735437.1\|WP_002470063.1\|127869_128892_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	3.88064e-17
NZ_LR735437.1\|WP_002470067.1\|125876_126302_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|273844	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2. These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This model represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2.	3.92956e-21
NZ_LR735437.1\|WP_002469395.1\|134111_134720_-\|radical-SAM-protein	gnl\|CDD\|275338	TIGR04545, rSAM_ahbD_hemeb, heme b synthase. Members of this family are AhbD (alternative heme biosynthetic protein D), a radical SAM enzyme in sulfate-reducing bacteria and methanogens that performs the last decarboxylations to synthesize heme b from Fe-coproporphyrin III. Members include DVU_0855, previously included in error in TIGR04055, the NirJ2 family thought to be involved in heme d1 biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	1.00634e-16
NZ_LR735437.1\|WP_002505142.1\|133141_133915_+\|tandem-type-lipoprotein	gnl\|CDD\|367972	pfam04507, DUF576, Csa1 family. This family contains several uncharacterized staphylococcal proteins. These proteins have been called conserved staphylococcal antigens (Csa).	2.1372e-124
NZ_LR735437.1\|WP_002458482.1\|137550_138216_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.61106e-62
NZ_LR735437.1\|WP_002469401.1\|126303_126948_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.35084e-106
NZ_LR735437.1\|WP_002469393.1\|123600_125874_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_LR735437.1\|WP_002469408.1\|131850_132708_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	4.72494e-46
NZ_LR735437.1\|WP_002469410.1\|118633_119269_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.15384e-45
NZ_LR735437.1\|WP_002469412.1\|126958_127867_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.87464e-38

>NZ_LR735437.1|WP_002469397.1|130156_130891_+|CRISPR-associated-endoribonuclease-Cas6
MINKITVELDLPDNIRFQYLGSILHGVLMDYLPNDIADQLHHEFAYSPLKQRIYYKSKKVIWEIVCMSDNLFKEIVKLFSSKNSLLLKYYQTNIDIQSFQIEKINVQNIMNQLLQTEDLNRYVRLNIQTPMSFKYQSSYMIFPDVKRFFRSIMIQFDAFFEEYKMYDKETLDFLMKNVNIVDYKLKSTRFNLEKVKIPSFTGEMVFKIKGPLPFLQLTHFLLKFGEFSGSGMKTSLGMGKYSII
>NZ_LR735437.1|WP_002469411.1|128891_130160_+|type-III-A-CRISPR-associated-protein-Csm6
MKVLFSPIGNSDPWRNDRDGAMLHIVRHYNLDKVVLYFTRTIWEGNENRKGHKIYEWEKIIQTVSPNTEVEIIIENVDNAQDYDVFKEKFHKYLKIIEDSYEDCEIILNVTSGTPQMESTLCLEYIVYPENKKCIQVSTPTKDSNAGIEYSNPKDKVEEFEIVNEVEKKSEKRCKEINILSFREAMIRSQILGLIDNYDYEGALNLVSNQKSFRNGKLLRKKLLSLTKQIKTHEVFPEINEKYRDDALKKSLFHYLLLYMRYNRHDVAETLIRVKSIAEFILKTYIEIHWPTLIIEKDDKPYLNDEDNLSFVDKYKLLLGKRNQNFDVSRILGLPAFIDILTILEPNSKLLKEVNAVNDINGLRNSIAHNLDTLNLDKNKNYKKIMLSVEAIKNMLHISFPEIEEEDYNYFKEKNKEFKELL
>NZ_LR735437.1|WP_002470063.1|127869_128892_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MTIKNYEVVVKTLGPVHIGSGQVMKKQDYIYDFYNSKVYMINGNKLVKFLKRKNLLHTYQNFLRYPPKNPRENGLKDYLDAQNVKQSEWEAFVSYSEKVNQGKKYGNVRPKPLNDLHLMVRDGQNKVYLPGSSIKGAIKTTLVSKYNNEKNKDIYSKIKVSDSKPIDESNLAIYQKIDINKSEKPMPLYRECVDVNTEIKFKLTIEDEIYSINEIEQSIRDFYKNYYDKWLVGFKETKGGRRFALEGGIPDVLNQNILFLGAGTGFVSKTTHYQLKNRKQAKQDSFEILTKKFRGTYGKMKEIPSNVPVALKGTTNQSRHTSYQQGMCKVSFQELNNEVL
>NZ_LR735437.1|WP_002469412.1|126958_127867_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MATKVFKLSFKTPVHFGKKRLSDGEMTITADTLFSALFIETLQLGKDTDWLLNDLIISDTFPYENELYYLPKPLIKIDSKEEDNHKAFKKLKYVPVHHYNQYLNGELSAEDATDLNDIFNIGYFSLQTKVSLIAQETDSSADSEPYSVGTFTFEPEAGLYFIAKGSEETLDHLNNIMTALQYSGLGGKRNAGYGQFEYEIINNQQLSKLLNQNGKHSILLSTAMAKKEEIESALKEARYILTKRSGFIQSTNYSEMLVKKSDFYSFSSGSVFKNIFDGDIFNVGHNGKHPVYRYAKPLWLEV
>NZ_LR735437.1|WP_002469401.1|126303_126948_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYSKIKISGTIEVVTGLHIGGGGESSMIGAIDSPVVRDLQTKLPIIPGSSIKGKMRSLLAKHFGLKMKQESHNQDDERVLRLFGSSEKGNIQRARLQISDAFFSEKTKEHFAQNDIAYTETKFENTINRLTAVANPRQIERVTRGSEFDYVFIYNVDEESQVEDDFENIEKAIHLLENDYLGGGGTRGNGRIQFKDTNIETVVGEYDSTNLKIK
>NZ_LR735437.1|WP_002470067.1|125876_126302_+|type-III-A-CRISPR-associated-protein-Csm2
MILAKTKSGKTIDLTFAHEVVKSNVKNVKDRKGKEKQILFNGLTTSKLRNLMEQVNRLYTIAFNSNEDQLNEEFIDELEYLKIKFYYEAGREKSVDEFLKKTLMFPIIDRVIKKESKKFFLDYCKYFEALVAYAKYYQKED
>NZ_LR735437.1|WP_002469393.1|123600_125874_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MNKKNILMYGSLLHDIGKIIYRSGDHTFSRGTHSKLGHQFLSQFSEFKDNEVLDNVAYHHYKELSKANLDNDNTAYITYIADNIASGIDRRDIIEEGDEEYEKQLFNFDKYTPLYSVFNIVNSEKLKQTNGKFKFSNESNIEYPKTENIQYSSGNYTTLMKDMSHDLEHKLSIKEGTFPSLLQWTESLWQYVPSSTNKNQLIDISLYDHSRITCAIASCIFDYLNENNIHNYKDELFSKYENTKSFYQKEAFLLLSMDMSGIQDFIYNISGSKALKSLRSRSFYLELMLEVIVDQLLERLELTRANLLYTGGGHAYLLVSNTDKLKKKITQFNNELKKWFMSEFTTDLSLSMAFEKCSGDDLMNTSGNYRTIWRNVSSKLSDIKAHKYSAEDILKLNHFHSYGDRECKECLRSDIDINDDGLCSICEGIINISNDLRDKSFFVLSETGKLKMPFNKFISVIDYEEAEMLVQNNNQVRIYSKNKPYIGIGISTNLWMCDYDYASQNQDMREKGIGSYVDREEGVKRLGVVRADIDNLGATFISGIPEKYNSISRTATLSRQLSLFFKYELNHLLENYQITAIYSGGDDLFLIGAWDDIIEASIYINDKFKEFTLDKLTLSAGVGMFSGKYPVSKMAFETGRLEEAAKTGEKNQISLWLQEKVYNWDEFKKNILEEKLLVLQQGFSQTDEHGKAFIYKMLALLRNNEAINIARLAYLLARSKMNEDFTSKIFNWAQNDKDKNQLITALEYYIYQIREAD
>NZ_LR735437.1|WP_002469399.1|123282_123588_+|CRISPR-associated-endonuclease-Cas2
MYLLVSFDLPRDTKLERRIASKYRLRLIELGFSMKQFSLYERYVSNVQKKDKILEILKQEIPDTGSITLYILPDEVNSNQITILGKEVKLAVNKEPKLIFI
>NZ_LR735437.1|WP_002469413.1|122377_123283_+|type-II-CRISPR-associated-endonuclease-Cas1
MKDVIYVENHYFVTAKENSIKFRNVIDKSEKFYLFEEIEAIIFDHYKSYFSHKLVIKCIENDIAIIFCDKKHSPVTQLISSYGMVNRLKRIQSQFQLSGRTKDRIWKKIVVNKIFNQTRCLENNLHNENVKLMLGFAKEVSSGDKSNKEAHAARIYFKDLFGKQFKRGRYNDVINSGLNYGYSILRSFINKELAIHGFEMSLGIKHQSKENPFNLADDIIEVFRPFVDNIVYEIVFKKNIDTFDINEKKLLLNVLYERCIIDKKVVRLLDSVKIVIQSLIRCYEENTPTYLLLPKMIEVGN
>NZ_LR735437.1|WP_002469410.1|118633_119269_+|ATP-binding-cassette-domain-containing-protein
MLKIERLTKYIDTQLIFKEISCTLNDQHLLISGESGCGKSTLAKIIAGLDTDYQGELYLNGRLRESYTSKEWMKHIQYVPQYQRDTLNQRKTVLATLLEPLKNYKLNKQRYTSSIEAVLDQCNLPHDILNQKVSTLSGGQFQRVWIAKALILEPEILILDEATTNLDVINEEAILQMLISLKMTQLIIISHDTYILSQFEGIQLQLNKLNN
>NZ_LR735437.1|WP_002469408.1|131850_132708_+|GIY-YIG-nuclease-family-protein
MIELNKFIKVPDLNKTKIKFNMNAGNVEIRAWDLLFKEDETEWEQINAWKTKHPNNNLNHADYLLAFAQYYPYGPEYFIFGGLYKIKKIEPEVFDEVGYELTLMDDYKEYRKRLIVKLKKPIGRDLYNRLYKNIQDTLEPEVYEIAPNTKLGHFPGYQNVTLSHPQMQQIISRNEPSWKQALMNVKGVYVITDLSNGKLYIGSASGNTDGIWQRWSDYANIENLTGGNKLLNEIKLDKGKDYIVNNFQYSILEIFDTKTKADIIINRENYWKNVFCTRKYGMNYN
>NZ_LR735437.1|WP_002505142.1|133141_133915_+|tandem-type-lipoprotein
MKHSKKLLLCISFLLITIFIGGCGFINKDDSKETEIKKSFNKKLSMYPIKNLEDLYDKEGYRDEEFNKNDKGTWVITSSINIQQKGEGLKTRRMVLFMNRNTRTSKGKFMITEVKEKSDIGFQTRKKEYPVKLIDNKFIPSKQIKDEKIKKEIENFKFFSQYGNFKDLKDYKDGEVSYNPNAPNYSAKYQLSNNDYNVKQIRKRYDIPTEQAPKLLLKGTGDLKGSSTGSKNIEFTFVEKKGENIYFTDSVEYTPSE
>NZ_LR735437.1|WP_002469395.1|134111_134720_-|radical-SAM-protein
MYIKNTNVHEVYFKNKVLLVNLNNGQWVRTSRKYFEVLNKLVESNQIGDFMKYKYVSNVIDNLKRLFNELLEIRYYVDEEKTHQENNLSVTFTLTNKCNLSCSHCALSASPLSQDILSTNDVKYAIDKIIDVNPNTLILTGGEPFIRKDILEIISYIRTNFKNKLVIMTNGMLIRKNSFHFKKRIGYVNKCEMASLRVHMAS
>NZ_LR735437.1|WP_002469405.1|134891_135797_+|ABC-transporter-ATP-binding-protein
MNEIVIKGLSKSYDGKKDALNSLDLVIPNGMFGILGRNGSGKSTLMNIIATILQPSKGTVTINGIEIKNSQKIRQMIGYLPQDFDFYPNMKVSEVLYYLGFLSKINQTDFDKYVDLILRKVNLIDYKNKKVKSLSGGMKKRLGIAQAILHDPKVIIVDEPTAGLDPEERVRLRNLLSDLAENKIVIISTHIVSDIESTCNRIAILDKGSLVYKGDIPSLIQQSDDHIYEINLSPSELESFRENDLFITKTQEIENKLKVRFISETKVANAKKVKADFEDAYMYFLKKQQGGLNHASIYNGI
>NZ_LR735437.1|WP_002469424.1|135771_136893_+|ABC-transporter-permease
MRLFIMEFKHLMVSKTFLFYCLLIIIFTVLNCQQVLKHPINSDVYQPQNMIMYSTDKNIIMSNEIKELKNEVHQNNFKTYQFGFLKQKKLNDQQISKIKKLISKMEKTNNFHQFKNYSNSVSHVVGWGSQYSKNNISLFGIKNMSKSKYVKEKNIIKNKEYYYGAYSRYFSDIIGVVLGILPFFLGAQMILQDKKSNAIKTIHSKSISSYQLISTRVFTILVLAYLPVLLVSIYFVTCLSMIHQISMFSLFIFYKILILWTLPTLIFTIAMGLFVTIILNSYLGVMIQIVIWFINLNIGSRAIEGCYSSLLIPRHNTLFNAVFFYNHFNQILANRFTYFGLGLLLILLSTYIFDLKRRGVGFNGKIFTNRYQN
>NZ_LR735437.1|WP_002469394.1|136858_137470_+|hypothetical-protein
MAKFLLIDIKTNLVKLYIGILILLFGGMFIFGVSNLNHESVTQYIELIFTILGILLFTAIYSVDQNKKSKLTIGAKCHDYQFVFMLRLVITIIYILFLITINLFIFHLFNSNIIVLRDMFIALTSTLFIGSICLLTSILSGNTLNGLMFGLVYFLFCLGFRNLGFMYLFSETFNFPFYIKIFQFLLGIVLLIFSYTIIKKVQN
>NZ_LR735437.1|WP_002458482.1|137550_138216_+|response-regulator-transcription-factor
MYNIMIVDDEEKIVSFIKESLYLEGFNTIVAYNGRDVLKQIDDKIDLIILDIKMPYIDGFEVAQSLKESNIPIIFLTAKDNLDTRLKCFSLGAKDYLPKPFYMEELIIRIKNVLNQSHSQSLTPNIKKTKELIIYYDTYRIDVNNMTIDITKKEFEIIKLLSLNPQYYFSKEQIYDSINLNKTGNTQVVAEHIRKIRKKLSCYSRFEYIDTKWGVGYKWLE
>NZ_LR735437.1|WP_002469423.1|138203_139295_+|HAMP-domain-containing-histidine-kinase
MARVESLKRKMTRLIIAIIVVSVGLVFLLQILLNVLEFSNFGKSLYTNFWKQPHYIFSFTSACISIMTPLLIIYVFTQFFYKKYITTSINYLNDTIQGLKNNRTDVEYKKMSISEFNKVIQEVEHIHTYLANSIKDQLSIQNNFKRKLEILEHDLKTPLTVLQGHIELLRKINCSNLSQEEIHFKINREADIALQSIDRINNQLQIHIKNINLLPNHSDTIHVDKVIKIIKESYNQQYILKERELIIDVDHDFPYYTLSINNQVLYHVIDNLINNALKYAEKQISIKFEVINDHLLNFTITNDGRIFTEDELNSAKEWGTKGKESNGSGIGLYFANIVLQQYNSELILENENNHAKVSFNIPV
>NZ_LR735437.1|WP_002469387.1|140228_141590_+|SLC45-family-MFS-transporter
MNDTDRTHKENKLEQDITLPYLKKAVIFSITFGFFGVNMAFALQSAMMGRIFQTLGANPNNLGWFFILPPLVGMIVQPLIGYYSDRTWTRFGRRMPYLLIAGPIGAIVLVLLPNAGSFNFGYASLMALSFGAVMTLLMDLTSNACMQPYKMIIGDMVNEKQKDMAWSWQQIFSNLGGIIATVLPFLLTMLGMSNVAPKGEVPMTVKLAYYIAAAVLLIASIWTVISVREYEPKTYNYYHGINENNRNNKLSLLQLLKKAPKQFWQISVVQFFNWFALMYLWTYSTGAIAKNVWNVTDPSSAGYQAAGNWYGVLYCIQFLSSVIFGFVIARSKPSQRKFWYSFGLVFGGIGLISIFFIHNQWLLIFSFVLIGINNLTMNTQPFTLLTEAIDGENSGAYLGLFNTSICLPQIVASIVSFGLYPLLGSSMPAMLLLAGIMMLLGAVSVKFINAKFE
>NZ_LR735437.1|WP_002469422.1|142133_142619_+|hypothetical-protein
MKKVSKFILASSLILDFSVTPELFNVTQAHAQESVKPYYNYSGYTAYQSNFILDKNFKTSLKADNFKINGYKITQNESAKNDKDVYDQTYYGVSNHKANGVFFSLDGKSVSEKELLNHYGEPKSTSTSAWGKEYTYKIGNKDVRFYVNRNGYVIKGQIISE

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Crispr_ID: NZ_LR735437_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_4

538812-538895

Orphan

Consensus_repeat	Method
GAAATTCTACGGACAAGGCAAGTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735437_4

>merge|NZ_LR735437|4|538812-538895|CRISPRCasFinder
GAAATTCTACGGACAAGGCAAGTTGGGGTTCGGGGCCCCAACAAAGAGAATTTCACCGAGAAATTCCACGGACAAGGCAAGTTG

>NZ_LR735437|4|4|538812-538895|CRISPRCasFinder
GAAATTCTACGGACAAGGCAAGTTG	GGGTTCGGGGCCCCAACAAAGAGAATTTCACCGA
GAAATTCCACGGACAAGGCAAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_104832443.1\|529603_530782_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_LR735437.1\|WP_001831616.1\|549428_550427_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	unknown	unknown	gnl\|CDD\|274094
NZ_LR735437.1\|WP_001831506.1\|550428_551196_-\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
NZ_LR735437.1\|WP_002456683.1\|544552_546340_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_LR735437.1\|WP_002469549.1\|531014_531170_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002456688.1\|536635_538129_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143435
NZ_LR735437.1\|WP_002469543.1\|541482_542907_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143407
NZ_LR735437.1\|WP_001831535.1\|540016_540298_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_LR735437.1\|WP_001832363.1\|528322_529222_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_LR735437.1\|WP_002438142.1\|533360_534170_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_LR735437.1\|WP_089418815.1\|531494_531671_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002456690.1\|534356_535349_-\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|183550
NZ_LR735437.1\|WP_002438140.1\|531734_532229_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_LR735437.1\|WP_002505060.1\|535595_536258_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_LR735437.1\|WP_002468270.1\|540464_541412_+\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_LR735437.1\|WP_002456687.1\|538957_539755_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|225312
NZ_LR735437.1\|WP_001831584.1\|548706_549321_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_LR735437.1\|WP_002438166.1\|546568_548533_-\|fructose-1,6-bisphosphatase	unknown	unknown	gnl\|CDD\|226373
NZ_LR735437.1\|WP_002456684.1\|543155_544205_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226458
NZ_LR735437.1\|WP_001831599.1\|532404_533016_+\|class-A-sortase-SrtA	unknown	unknown	gnl\|CDD\|130148

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_104832443.1\|529603_530782_+\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	4.26255e-20
NZ_LR735437.1\|WP_001831616.1\|549428_550427_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	gnl\|CDD\|274094	TIGR02356, molybdopterin_biosynthesis_protein_moeB, thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	3.34753e-109
NZ_LR735437.1\|WP_001831506.1\|550428_551196_-\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	3.65912e-146
NZ_LR735437.1\|WP_002456683.1\|544552_546340_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	4.82164e-44
NZ_LR735437.1\|WP_002456688.1\|536635_538129_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143435	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.	0
NZ_LR735437.1\|WP_002469543.1\|541482_542907_-\|aldehyde-dehydrogenase	gnl\|CDD\|143407	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.	0
NZ_LR735437.1\|WP_002438166.1\|546568_548533_-\|fructose-1,6-bisphosphatase	gnl\|CDD\|226373	COG3855, Fbp, Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism].	0
NZ_LR735437.1\|WP_001832363.1\|528322_529222_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	8.36299e-108
NZ_LR735437.1\|WP_002438142.1\|533360_534170_+\|HAD-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	6.69679e-48
NZ_LR735437.1\|WP_001831535.1\|540016_540298_-\|N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	1.79195e-31
NZ_LR735437.1\|WP_002456690.1\|534356_535349_-\|D-lactate-dehydrogenase	gnl\|CDD\|183550	PRK12480, PRK12480, D-lactate dehydrogenase; Provisional.	0
NZ_LR735437.1\|WP_002438140.1\|531734_532229_-\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	4.36783e-63
NZ_LR735437.1\|WP_002505060.1\|535595_536258_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	1.47086e-74
NZ_LR735437.1\|WP_002468270.1\|540464_541412_+\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	3.07244e-113
NZ_LR735437.1\|WP_002456687.1\|538957_539755_-\|VOC-family-protein	gnl\|CDD\|225312	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only].	2.77668e-100
NZ_LR735437.1\|WP_001831584.1\|548706_549321_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.68558e-44
NZ_LR735437.1\|WP_002456684.1\|543155_544205_-\|membrane-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	1.03006e-86
NZ_LR735437.1\|WP_001831599.1\|532404_533016_+\|class-A-sortase-SrtA	gnl\|CDD\|130148	TIGR01076, Uncharacterized_protein_YhcS, LPXTG-site transpeptidase (sortase) family protein. This family includes Staphylococcus aureus sortase, a transpeptidase that attaches surface proteins by the Thr of an LPXTG motif to the cell wall. It also includes a protein required for correct assembly of an LPXTG-containing fimbrial protein, a set of homologous proteins from Streptococcus pneumoniae, in which LPXTG proteins are common. However, related proteins are found in Bacillus subtilis and Methanobacterium thermoautotrophicum, in which LPXTG-mediated cell wall attachment is not known. [Cell envelope, Other, Protein fate, Protein and peptide secretion and trafficking].	1.43034e-42

>NZ_LR735437.1|WP_002456688.1|536635_538129_+|aldehyde-dehydrogenase-family-protein
MTNINVRNYIDESYGLFINNEFQASDSGETLTVSNPANGEDLAKVARAGKKDVDKAVQAAHDAFDSWSKISKEERADYLLEISRRIHEKTEHLATVESLQNGKPYRETSTIDVPQAANQFKYFASVLTTDEGSVNEIDQNTMSLVVNEPVGVVGAVVAWNFPILLASWKLGPALAAGNTVVIQPSSSTPLSLIELAKIFQEVLPKGVVNVLTGKGSESGDAIFHHEGVDKLSFTGSTDVGYGVAQAGAERIVPTTLELGGKSANIIFDDANLEQVIEGVQLGILFNQGEVCSAGSRLLVQSSIYNELLPKLKEAFENIKVGDPFDEDTKMSAQTGPEQLDKIESYIKIAEEDDKANILTGGHRITDNGLDKGYFFEPTIIEINDNKHQLAQEEIFGPVVVVEKFDDEQEAIEIANDSEYGLAGGIFTTDIHRALNVAKAMRTGRIWINTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQQVKNIFIDTSNQTKGLY
>NZ_LR735437.1|WP_002505060.1|535595_536258_+|NAD(P)H-dependent-oxidoreductase
MNQMNQTIIDAFHFRHATKEFDPTKKISDEDFNTILETGRLSPSSLGLEPWHFVVVQNKELREKLKAYSWGAQKQLDTASHFVLIFARKNVTAHTDYVQHLLRGVKKYEESTIPAVENKFDDFQESFHIADNERTLYDWASKKTYIALANMMTSAALLGIDSCPIEGFDLDKVTEILSDEGVLDTEQFGISVMVGFGYRAQEPKHGKVRQNEDDIISWIE
>NZ_LR735437.1|WP_002456690.1|534356_535349_-|D-lactate-dehydrogenase
MTKIMFFGTRAYEKDMALRWGKKNNIDVTTSTELLSVDTVDQLKDYDGVTTMQFGKLEPEVYPKLESYGIKQIAQRTAGFDMYDLELAKKHEIIISNIPSYSPETIAEYSVSIALQLVRKFPTIEKRVQAHNFTWASPIMSRPVKNMTVAIIGTGRIGAATGKIYAGFGARVVGYDAYPNHSLSFLEYKETVEDAIKDADIISLHVPANKDSFHLFDNNMFKNVKKGAVLVNAARGAVINTPDLIEAVNNGTLSGAAIDTYENEANYFTFDCSNQTIDDPILLDLIRNENILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCDTRLN
>NZ_LR735437.1|WP_002438142.1|533360_534170_+|HAD-family-hydrolase
MIKAIAVDMDGTFLDTNKQFDRNRFETIFKELIDKNIKFIAASGNQFAKLKSIFGDREMFFISENGAVIYKGNQLYNYRSFDQYIFQKVVNYLNLNQKINNLIICGVKSAYILKETSEAFKQDARTYYHQLIEVDSLQTLPDDDYVKIAFNINRQTHPDLDEKLALKFKDDIKLVSSGRDSIDVIMPNMTKGQALSRLLKEWQMPASHLMAFGDANNDKDMLELAEHSYVMANSEDQSLFDIASHVAPSNDEQGVLSTIENVVLGYSNK
>NZ_LR735437.1|WP_001831599.1|532404_533016_+|class-A-sortase-SrtA
MKQWMNRLITLIGVLLIILAIYLFSKPYIDNYLHEKDNDHKIENYDKKEKEQTKTSKSTPKIPSDKSKMAGYIEVPDAQIKEPVYPGPATPEQLNRGVSFAEGDESLNQQNISIAGHTFTDRSHYQFTNLKSAKIGSKVYFKTGNQTRKYKITKIRDVKPTEVKVLDEHPNKKNQLTLITCDDYNEETGVWETRKIFIATQIN
>NZ_LR735437.1|WP_002438140.1|531734_532229_-|N-acetyltransferase
MIRFARLEDLQGILTIYNDAILNTTAVYTYKPQQLDERLQWYQSKAKINEPIWVYEKEGKVVGFATYGSFRQWPAYLYTIEHSIYVHQQYRGLGIASQLLENLIRYAKEQGYRTIVAGIDASNMDSIALHKKFDFSHAGTIKNVGYKFDRWLDLSFYQYDLSDS
>NZ_LR735437.1|WP_089418815.1|531494_531671_+|hypothetical-protein
MLRLFLIFITFIINTTITYLWTIEGTWPNLLFKSLSLSMIIVFMFYYIRFVIENKKED
>NZ_LR735437.1|WP_002469549.1|531014_531170_-|hypothetical-protein
MYKDYNMTQHTLLMETSVLISTNDISRHVNDIAETIPDTEFDEFRHYRGLI
>NZ_LR735437.1|WP_104832443.1|529603_530782_+|IS110-family-transposase
MSKRSSVVAHYKNGKFQKEFFIQNNKNGYNYLLKYLNDLHHPQLIFESTGIYSRGMQRFCCVNQINYIQMNPLEAKFKTSTLRSWKTDQADAHKLACLGPTLKQTGNLPIHELIFFELRERVRFHLEIENEQNRLKFQILELLHQTFPGLERLFSSRYSIIALNIAEIFTHPDMVLDIDKDVLITHIFNSTDKGMSMDKATKYALQLRVIAQESYPNVDRHSFLVEKLRLLIQQLKQSIHHLKQLDDAMIQLAQQLDYFENIHSIPGIGKLSTAMIIGEIGDIKRFKSNKQLNAFVGIDIKRYQSGHTHCRDTINKRGNKKARKLLFWVIMNIIRGQHHYDNHVVDYYYKLRKQPNEKPHKTAIIACINRLLKTIHYLVMNHKLYDYQMSPH
>NZ_LR735437.1|WP_001832363.1|528322_529222_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFDSIRETIDYSVENNISFADMMINDEMEREGKSREEVRDLMRQNLNVMREAVEKGTTGDGVESVTGYTGHDAAKLRDYNENNHALSGHEMIDAVKGAVATNEVNAAMGIICATPTAGSSGTIPGVIFKLEKTHNITEDQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAAAAAVSIFNGSPEQSGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLALAGVESQIPVDEVIGAMDRVGRNLPASLRETGLGGLAGTPTGEEIKRKIFGEADNMVKNK
>NZ_LR735437.1|WP_002456687.1|538957_539755_-|VOC-family-protein
MTNFHSIDATQVTNVTLNVKDLNKLTDFYSNVLGFSIEKQTNQQTVFNIGNLGYTLTLNELNNGRQPEFREAGLFHVAYLLPTRSDLADFLYHANNLNIAMGGGDHLVSEALYFTDPEGNGIEVYHDRPSEDWVWRDGFVKMDTLEVNVNDLMAQRSNEGWQGWPEEGKIGHLHLKTHNLESAYEFYVEKLGFEHISNFPQALFMSTQKYHHHIATNTWQSNKIRTQNEQTYGLCHFDIYQPNANTTHVTSPEGFDITIHGNETK
>NZ_LR735437.1|WP_001831535.1|540016_540298_-|N-acetyltransferase
MAAEIKQGDHKFYVGNDENNPKAVITFKEVDNNEIDIDHTGVSDELGGQGLGKKLVNRVVEHARENNLKIIASCPFAKNVLEKDDHAQDVYLG
>NZ_LR735437.1|WP_002468270.1|540464_541412_+|zinc-ABC-transporter-substrate-binding-protein
MKKLIIVSIIILMLSGCSSFDHRKRESINDKNKMKVYTTVYAFQSLTQQIGGKYVDAQSIYPAGADLHSYEPTQKDMIDIAKSDLFVYSSHQLDPVAAKITNSMTNNSMKLALAEGLKQSDFIHSKDHDENHEHHSHHEESNQDPHVWLDPVLNQKFAFMIKEKLIEKDPKHQAYYNKNYKIVNKDIVHIDQQLQSITKHSKRDKVVISHDSLGYLAHRYGFKQQGVKGMNDEEPSQKEILNIVKDIQHSHAPYVLYEQNITSKITDVIKKETDTKPLSFHNLAVLTKEEQNDDSISYQSLMKKNIYVLNRALNN
>NZ_LR735437.1|WP_002469543.1|541482_542907_-|aldehyde-dehydrogenase
MTNQLFINNEFIESQSKETMDVINPATGEAFDTITLATEEEVNDAIEKSQQAQLEWERVPQPTRAEHVKLLIPLLEKNRDEIAQLYVKEQGKTLAQAYGEIDKSISFIDYMTSLSMSDKGRVLQNSIANETIQIINKPIGVTAGIVPWNAPILVLMRKVIPAIVTGCSVVIKPSEETTLLTLRLAELFRASTIPAGLFQIVPGTGETVGTQLASHKDIQLISLTGSMRAGKSVYENAAQTVKKVNLELGGNAPVIVTSNADLDKAVNYIVTARINNAGQVCTCPERIFVHEDVHDDFLNKVTSKMKSLTVGDPFDENTDYGAIINQKQLDSIHEKVQDAIKNGATLMTGGHQLKRHGFFYAPTVLDNVRKDYNVFKDEIFGPVLAITTYRDFEQVIEDANDTNAGLSSYIFSENLTEVMTATERLKFGEVYANCEAEEVVNGYHAGWRESGLGGADGIHGFEEYYNTTVSYIRY
>NZ_LR735437.1|WP_002456684.1|543155_544205_-|membrane-protein
MNNVKESIIVAFAFVGVVVGAGFATGQEIFQFFTSHGIYSIGGIFITGLILTLGGIFVLNTGFRLRSQNHSESIRYYLHPTIAKLFDIILTVFLFSLAIIMTAGGASTINESFGLPFWLSSFILVILILITLFLKFDRLIAVLGGVTPFLVAVVVMIAVYYFITGDLNFSDVSQYSNQNKSISPGWWFDAINYASLQIAAAFSFLTVMGGKLRYQSSTIYGGLIGGIIVTLLLLLINFGLVTEFNQIKEVALPSLLLAKQISPSIGIIMSVIMVLVIYNTVVGLMYAFASRFSRPFTKRYYILIVMMAIITFACTFVGFISLIGKVFPIMGLFGFILLIPVIYKGILRK
>NZ_LR735437.1|WP_002456683.1|544552_546340_+|sodium:proton-antiporter
MSLELPVMLTIVLFLALGIFSQWLASRIKWPSIVVMAIVGLLVGPIFGLANPKEALGPEAFSSIVSLAVAIILFEGSSNLDFRELKGISKAVIRIITIGAGIAWILGAIALHVTMNFPLSISFVIGGLFLITGPTVIQPLLKQAKVKRNVDSVLRWESIILDPIGPIIALTAFYVFQIFEEGIGLVVIILFILKLLAAILIGFGAAFLFNWLISQDKIPQSLMPPIQLVFILLTFSICDEILSESGLLAVTIFGLMMARKKRHDLIFKESDHFIDNASSILVSTVFILITSSLTKDVLLNVLSWQLILFSLVMIVLVRPISVLLSTLGTEITKKERAVVALMAPRGIVVLTVAQFFSSLFMDDKIPMAQYITPVTFGLVFITVVIYGFGFTPLSKLFGVASTEPPGVIIVGESEFSFHLGINLRDHGIPVMMFNLFENTSEKAHEAGFEVFKGNLLSSNDRIYSDLLRYNKCILMTQSFIFNSLAFNELVPEFGLNNVDMMPVSFNDEQARNNLNGPIRNHILFDENHTPRWFNQFITQHNIVEVPAEDYEKITENDMLIYHINEDKEVTFKRSNRDIPEHETGVYGILKNAYLT
>NZ_LR735437.1|WP_002438166.1|546568_548533_-|fructose-1,6-bisphosphatase
MTHITESEMKQKYLDLLSQKFDSAEKLATEIINLESILELPKGTEHFVSDLHGEYESFQHVLRNGSGNVRAKINDIFKDKLSQQEINDLAALVYYPEEKLKLVKNNFDSIGTLNIWYITTIQRLIDLITYCSSKYTRSKLRKALPEQYVYIIEELLYKSNEFHNKKPYYETLVNQIIELEQSDDLIIGLSYTVQRLVVDHLHVVGDIYDRGPKPDKIMDTLINYHSVDIQWGNHDVLWIGAYAGSKVCLANLLRICARYDNLDIIEDAYGINLRPLLTLAEKYYDAENPAFKPKKRPDKDVSLTKREESQITKIHQAIAMIQFKLEMPIIKRRPSFEMEERLVLEKIDYDNNEITIYNKTYPLKDTCFQTVNPNNPAELLAEEKEVMDKLLLSFQQSEKLRRHMSFLMRKGKLYLPYNGNLLIHGCIPVDENGEMESFEIEGERLSGRELLDVFEYHVRRAFDHKESTEDISTDLVWYLWTGKYSSLFGKRAMTTFERYFIEDKASHKEEKNPYYYLREDVDMIRKMLKDFGLNPDEGRIINGHTPVKEIDGEDPIKANGKMLVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVAHKEFNRKEKVLSMGADELSVKRVVDEELQRKKIRDTNIGKQLQDQIDILKILMHDRYLT
>NZ_LR735437.1|WP_001831584.1|548706_549321_-|DedA-family-protein
MEQIITDFISKWGYTAIFILILLENVLPVVPSEIILTFAGLLSVKSHLSIWTLLIIATIASFIGLLILYYICRLISEEKLYRFVDRHGKWMKLKSKDLKRANDWFKKYGAWAVFLCRFVPVLRVLITIPAGINRMNVIQFTTLSLIGTTIWNFALILLGRLLSDSFDALMNGIHTYSRIMYVIIIIAVIYFVIRYLMKRRRSVK
>NZ_LR735437.1|WP_001831616.1|549428_550427_-|thiazole-biosynthesis-adenylyltransferase-ThiF
MSRYERQTRFAPFGEEGQQKLSSSQILIFGAGALGSHIVDQLARMGAHHIAIVDMDIVEISNLHRQTLFDEEDAHTLISKVEAIKHKVNQININVNLTTYDLEVTSSNIENLIKNVEPDIIIDGMDNFKIRYLINEVCHKYQIPWVYGAAVGSKGSVYGIDHQGPCLKCLLQTIPDTGESCAINGVIPPVISMIASYEVAEAVRYLSGKGFSKQLITIDAFNINYKSMNVDALKNKDCPVCEKHEYTLLESQQERTIEDLCGNAYLFRFPPKAFKHAAHFPGNMVKSTSFAKLIQYQTYEFTLFKDGRMNAYGIHNDEEAHHLYNTLLKSIR
>NZ_LR735437.1|WP_001831506.1|550428_551196_-|thiazole-synthase
MFKIGNLELQSRLLLGTGKFENEEVQSKAIEASETNVLTFAVRRMNLYDRNLPNPLANVNLKDFITFPNTAGAKTAQEAIRIAEIANHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYTVCPYISNDLVLAQRLEELGVHAVMPLASPIGTGRGINNPLNLSYIIENASVPVIVDAGIGSPKDACHAMELGADGILLNTAISAAKDPVKMAEAMKLGINAGRLSYEAGRIPVKYTAQASSPSEGLGFL

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Crispr_ID: NZ_LR735437_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_5

654492-654574

Orphan

Consensus_repeat	Method
AAACAGAAGCAAAACAATCTATGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735437_5

>merge|NZ_LR735437|5|654492-654574|CRISPRCasFinder
AAACAGAAGCAAAACAATCTATGATTGTTAGTGGCTCTTATGCATTTTTGAAAAATGTAAACAGAAGCAAAACTATCTATGAT

>NZ_LR735437|5|5|654492-654574|CRISPRCasFinder
AAACAGAAGCAAAACAATCTATGAT	TGTTAGTGGCTCTTATGCATTTTTGAAAAATGT
AAACAGAAGCAAAACTATCTATGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_002505062.1\|648456_649113_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR735437.1\|WP_002456062.1\|655235_655658_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|226389
NZ_LR735437.1\|WP_002438349.1\|661064_662012_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_LR735437.1\|WP_001831482.1\|652601_652967_+\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_LR735437.1\|WP_107508710.1\|664169_664469_+\|transporter	unknown	unknown	gnl\|CDD\|260082
NZ_LR735437.1\|WP_002456063.1\|659529_660975_+\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_LR735437.1\|WP_002438328.1\|649369_650533_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_LR735437.1\|WP_001831592.1\|646931_647384_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|379056
NZ_LR735437.1\|WP_173020228.1\|645651_646242_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_LR735437.1\|WP_001831504.1\|664682_665099_+\|DUF2871-domain-containing-protein	unknown	unknown	gnl\|CDD\|378551
NZ_LR735437.1\|WP_002456059.1\|647393_648428_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_LR735437.1\|WP_002438357.1\|665632_666625_-\|acryloyl-CoA-reductase	unknown	unknown	gnl\|CDD\|176249
NZ_LR735437.1\|WP_002438321.1\|646234_646912_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_LR735437.1\|WP_002438356.1\|665167_665569_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_LR735437.1\|WP_002438330.1\|651238_651685_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR735437.1\|WP_002456060.1\|653131_654412_+\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|183075
NZ_LR735437.1\|WP_002438342.1\|655730_657836_-\|AraC-family-transcriptional-regulator-Rsp	unknown	unknown	gnl\|CDD\|197666
NZ_LR735437.1\|WP_001831516.1\|658998_659376_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_LR735437.1\|WP_002505063.1\|651848_652478_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_LR735437.1\|WP_002438338.1\|654694_655045_-\|DUF4889-domain-containing-protein	unknown	unknown	gnl\|CDD\|374445

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_002505062.1\|648456_649113_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.05079e-75
NZ_LR735437.1\|WP_002456062.1\|655235_655658_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	6.16351e-40
NZ_LR735437.1\|WP_002438349.1\|661064_662012_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.20836e-108
NZ_LR735437.1\|WP_001831482.1\|652601_652967_+\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	9.91056e-13
NZ_LR735437.1\|WP_107508710.1\|664169_664469_+\|transporter	gnl\|CDD\|260082	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.	6.46551e-11
NZ_LR735437.1\|WP_002456063.1\|659529_660975_+\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_LR735437.1\|WP_002438328.1\|649369_650533_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.11888e-109
NZ_LR735437.1\|WP_001831592.1\|646931_647384_+\|GAF-domain-containing-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	2.00355e-05
NZ_LR735437.1\|WP_173020228.1\|645651_646242_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	6.86801e-51
NZ_LR735437.1\|WP_001831504.1\|664682_665099_+\|DUF2871-domain-containing-protein	gnl\|CDD\|378551	pfam11070, DUF2871, Protein of unknown function (DUF2871). This family of proteins has no known function.	1.93795e-46
NZ_LR735437.1\|WP_002456059.1\|647393_648428_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.43496e-57
NZ_LR735437.1\|WP_002438357.1\|665632_666625_-\|acryloyl-CoA-reductase	gnl\|CDD\|176249	cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_LR735437.1\|WP_002438321.1\|646234_646912_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	7.03174e-110
NZ_LR735437.1\|WP_002438356.1\|665167_665569_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.40673e-08
NZ_LR735437.1\|WP_002438330.1\|651238_651685_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.29821e-18
NZ_LR735437.1\|WP_002456060.1\|653131_654412_+\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	3.75555e-163
NZ_LR735437.1\|WP_002438342.1\|655730_657836_-\|AraC-family-transcriptional-regulator-Rsp	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.26611e-18
NZ_LR735437.1\|WP_001831516.1\|658998_659376_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	1.02229e-28
NZ_LR735437.1\|WP_002505063.1\|651848_652478_+\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	3.88556e-57
NZ_LR735437.1\|WP_002438338.1\|654694_655045_-\|DUF4889-domain-containing-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	6.96685e-27

>NZ_LR735437.1|WP_002456060.1|653131_654412_+|cation:dicarboxylase-symporter-family-transporter
MALFKKKISLPTQVIIALVLGVIAGLLLYGQDDVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKVGSYGWKAILYFEIITTIAIGLGLIIGNLFKPGSGLDPDKLPKGDITKYQSSAHSAEQATTYGNHLIDTLVHIVPTNLFESMAKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLFKLLVVVVFAMVFFVIVVLGIVARMVGISIFSIMKILKSELLLAFSTSSSEAVLPIMMKKMERFGSPKDVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYDIHLSLTEQLVLMATLMIASKGMAGVPGVSIVVLLTTLTSMNITAQGLALIIGIDRLLDMVRTCVNVIGNALSTVVIAKWENVYDKEKGQNYLNSI
>NZ_LR735437.1|WP_001831482.1|652601_652967_+|DUF3139-domain-containing-protein
MSKKQVIFRVIIILIISLILAIAFFFGLKAYQGHKNLELIDSYMSDHHLNDKVKKDKTSYSTKKGLYYKEVVFKDEPNVTYVIQPISTSKGIFIEGFDSETKKSIKKAKHSDFDQKYKPSK
>NZ_LR735437.1|WP_002505063.1|651848_652478_+|nitroreductase-family-protein
MTRINDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVESDEMKEKVKESFGFNSRQLTTSSAMLIIFGDLQNYEKAEQIYGDAVEQQLMTEDIKAQLLDWILPYYKNLSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDSDRYLPVLAIAIGKKAQDAHDSVGLRIDDVREFL
>NZ_LR735437.1|WP_002438330.1|651238_651685_-|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYTDYLKEYGLTYTGYIVLMAIEDDEKLNIKKLGERVFLDSGTLTPLLKKLEKKNYVIRTREEQDERNLQISLTERGKDIQNVLSDISQSVFNEFNITQEETQNLVEDLQNFVTKNFDKTVEK
>NZ_LR735437.1|WP_002438328.1|649369_650533_+|NarK/NasA-family-nitrate-transporter
MNMKKGVSQLTLQTLSLVAGFMAWSIISPLMPFISQDVDISPGQISVILAIPVILGSVLRVPFGYLTNIVGAKWVFFWSFIVLLLPIFLLGQAQSPGMLMLSGFFLGIGGAIFSVGVTSVPKYFSKDKVGLANGIYGVGNIGTAVSSFCAPVLAGAIGWQNTVRSYLIILSIFAILMFFLGDKNEPKVKIPLMAQVKDLSKNYKLYYLSLWYFITFGAFVAFGIFLPNFLVDHFSIDKVDAGIRSGIFIALATFLRPVGGVIGDKFNAVQALIIDFVIMIIGALILSLSSHIVLFTIGCLAISICAGIGNGLIFKLAPSYFSKEAGSANGIVSMMGGLGGFFPPLVITFVTSITGSSHLAFFFLAIFGVIALITMIHLNKKEKAIRI
>NZ_LR735437.1|WP_002505062.1|648456_649113_+|response-regulator-transcription-factor
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFIILSKRELEILPLIAKGYGNKDIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF
>NZ_LR735437.1|WP_002456059.1|647393_648428_+|sensor-histidine-kinase
MLEQTDLSLEQLLKNYYETTNEKIVFVNRQGKIIAMNDAAKDILTEEDNYNAMTNAICHRCEGYSNEYDVQSCKDCFLETTQLQHSNFQVFMKTKDNEIKPFTAMYQNIDEQRGISAFTLQNVAPQIERQEKMYQQKMLHRSIQAQENERKRISRELHDSVIQDMLNIDVELRLLKYKHRDKVLAETSQRIEGLLSQLIDDIRNMSVELRPSSLDDLGIEAAFKSYFKQFEENYGMHIKYDSNIKGMRFDNEIETVVYRVVQEGVFNALKYAEVNEIEVSTHSDGKQLVAEVVDRGKGFSLDHHPKGSGLGLYGMRERAELVNGHVNIETHINRGTIITLDIPI
>NZ_LR735437.1|WP_001831592.1|646931_647384_+|GAF-domain-containing-protein
MEPESLKHNQHLQMNLDKLRAQEGYDFGGIALYDYHHTSSPIKWQYVSGNTNDRYKLIILRKGRGLAGMVMKTGKRMVIADVDTALSPEEKVKFPIILSESLTAVVAVPLWLENSMYGVLLLGQRNHQPLPQSLDQLNIEKQIGIFTEIN
>NZ_LR735437.1|WP_002438321.1|646234_646912_+|respiratory-nitrate-reductase-subunit-gamma
MLNQFVWVIYPYLCLAIFVIGHIARYKYDQFSWTAKSSEMIEKKRLKWGSLLFHLGIIPVFFGHVVGLLIPANWLEAIGVNNHIYHIGAVYIGSVFGIITLIGMLLLTLRRLSIKNVRRLSSFSDIFVNIVLLIILIMGCYSTLVTNAIQPEFDYRQTIAIWFRHLFMFSPNADLMLNVPWSFKLHILLGFTVFACWPFTRLVHVWSVPLSYMNRRYIVYRKNKI
>NZ_LR735437.1|WP_173020228.1|645651_646242_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MEGSSVINLEQLSLYQDSLGYLGQQMNFPEKMTFHPKIFEETISKSHPGYEDLLAYREVMMNYTLSEIKAIYTDTFDFSKKHPLYMTFNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDFLPLMLQFLQVADFKNDSRAQKNLQLVIMIIEDGTYEMANTLAENNNPYAYVVSALRKTLKACIVPLKEVENHA
>NZ_LR735437.1|WP_002438338.1|654694_655045_-|DUF4889-domain-containing-protein
MKNKKGLGIGLITIMIIVCIVLVIMMFVGGKKESYYGIMKDSTTIDKMINTKNEKIEKNVELPKDANVSVKKEDFVMLFKDEKTGKITKVKKVNHDDVPHGLMSKIHDMGNMKHGM
>NZ_LR735437.1|WP_002456062.1|655235_655658_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MNKQQVTKAIEKVLNSSKIGVLSTAHHNKPNSRYMVFYNDDLNLYTKTNINSLKVEEIENNPDAHILLGYNETTNNSFVEIDATIEVVKNQKVIDWLWETQDKTFFNSKEDPELCVLKVIPRSIKLMNDDELDTPATIEL
>NZ_LR735437.1|WP_002438342.1|655730_657836_-|AraC-family-transcriptional-regulator-Rsp
MTCFLNIYKEYHSPPERNINRIILMFSLTNDLKITINGETKDLGNHIAIINQSDIYFINSASNLVLLSIPVIYFYSKDNKFFKCYFDRHLLQSSSFVKTIILQAIQHLIKGENQDEQSISKIIQTLLKEAVIRYKKKYIPQIAVNHSVFTEGLTFIHSKVSQSLSLREVAQHCNISESYCSNLFARYLNMNFKDYFTSLKVIDSIKRLLSSEDSINAISEQSGFSSHTNFTNQFKNYLGCSPKQYRTIISKLDSLPSISFSDTDFSQYIDLINQFEFSDHLATETTERDINEFYPQDQTKNSKAFIRFQNFNELFQFVFNEYYNIDFTSLPQAVIFINDITDISTREVNFNLLNRCFEKLFEKNIGLAMRLTSTNEFESIKEIILLFLNSHQDYKMNKKMVKFMLVFETKNMSVNDIHLCHLKIKNKNKAIRYSITVEGLLHQNSSIDRTYDMMKRLNFDYYFIDIENLETKNSLITKRKSYLHSSTHFENYKQFILDSGIPSTKFVYNNLSLKCFKYTNNGTYPLQLSDLVCHLVALMRYGGGVSYQLIEDESPFIALFNRYGSPLPLMHLYKLIEPFLNEPLEIANNFLMSRKDGNYHFLLFNKINDRYLSDSQQRYVFKNTLSTNSLIIIKTLNHEHGAIQNLLPQTKQQFYIERSILDELDKSNQPKTELAIQHDHHLPFQVTLKHDEVKYICFKPS
>NZ_LR735437.1|WP_001831516.1|658998_659376_-|YbgA-family-protein
MKERGKIEKLWREEKYRVLFHDQNAYHSIRTLLKSPTTLGEVKEHITHALTITPTKGSVINAFEHMWGYFKKQCTQYEKQHSRELKALYIENQIDYFELLSFLKNLADKYAVEYLQQSTILNITK
>NZ_LR735437.1|WP_002456063.1|659529_660975_+|PTS-sucrose-transporter-subunit-IIBC
MSYKKSAEEILKAIGGEENLDAMAHCATRLRLVLNDESKVDEDTLSNMDVVKGTFSTGGQYQIIIGSGTVNKVFNELEKITGKEASTTSEVKDKSSKHMNPFQKFVKMLSDIFVPIIPAIVAGGLLMGLNNIFTAKDLFYDGKSIIDVHSQFSGLADMINIFANAPFTLLPILIGFSAAKRFGGNPYLGAALGMILVHPGLMSAYDFPKALEEGKAIPHWDVFGLHINEVGYQGQVLPMLVATYILATIEKWLRKVIPTVLDNLLTPLLSIFITAFITFLFVGPVTRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNIAQGGAALAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAVAGSGIGAAYISFFKVKAIALGTAGLPGFISINPTHAGWLHYLIGMLIAFVVSVVVTLVLSRRKTNKTAVES
>NZ_LR735437.1|WP_002438349.1|661064_662012_-|magnesium-transporter-CorA-family-protein
MITAYKHALHHPSQIIETEINHSASWINVVEPDREEIEGLMEFYNIPEDFIRDPLDSEESARIEYDEDTGYSLIIIDLPIVNSTNRRVLSFVTIPLGIIIGNGIVMTVCDAENEFLENFAKQEDINLKFHSRFALEILTTIANHYNRNLRLLNKSRIRIERELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLVIENNQAIETTELHQRILESITSSYASLLSNDMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDHSYVSWIIVVGISLILVAIVSIFLWKKQKL
>NZ_LR735437.1|WP_107508710.1|664169_664469_+|transporter
MGPHEFIEFPIVVANPKKEGTFKWNATQTYDNGDVVKWTGKEDSAHPTPTTTVKKGANPNDTHSDSSQGDSIVLWIVAIVAIVISLIALFKQAHPKKFN
>NZ_LR735437.1|WP_001831504.1|664682_665099_+|DUF2871-domain-containing-protein
MRRLLYSFLFYMVIGLLSGFYYRELTKAHDFVGDTQLSLVHTHTLILGMFMFLLLLPLEKVFKLSSYYLFNWFFFVYHLGVLITISMMTVKGTFQVIGKKFSPEMFAGFAGIGHTGMLAGLLLLFFLLRQAILTEPKK
>NZ_LR735437.1|WP_002438356.1|665167_665569_+|GNAT-family-N-acetyltransferase
MTKIHFEAPSPEDYCNLRANAGMSSKSIEAAIKGLPHACFNVTLYENDMLIGMGRVIGDGGTVFQIVDIAVKDIYQGLGHGMAIMHEIMKYIESVAEEGTYVSLIADYPADQLYEKFGFKSTEPYSKGMYIKY
>NZ_LR735437.1|WP_002438357.1|665632_666625_-|acryloyl-CoA-reductase
MVEKFKAFVVDQDDNGIVSNSYKELTKDDLPEGDVLIKVHYSGINYKDALATQDHNKIVKQYPMVPGIDLAGTIEETNAPGFEVGDKVIVTSYDLGVSHYGGFSEYARVKSEWVIELPEDLTLEEAMIYGTAGYTAGLAIEQLEKSGMSIEGKEVLVRGATGGVGTISLLMLNNLGYDVIASTGRDDAEEKLKKLGAKEVIGRLPEDNSKPLEKRTWQAAIDPVGGENLPYIVKRLDNNGSVALIGMTGGNNFETTVFPFILRGASIIGIDSVFTPIKLRKRVWRRLAKDLKPQQLHDIKHVISFDEIPKAIDQVINHNNTGRIVIDFNV

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Crispr_ID: NZ_LR735437_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_6

1706782-1706883

Unclear

Consensus_repeat	Method
CACTTAATACATAGGTATTTAGTGTTTTTTATACATGA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_LR735437_6

>merge|NZ_LR735437|6|1706782-1706883|CRISPRCasFinder
CACTTAATACATAGGTATTTAGTGTTTTTTATACATGAACCTCAAGCTCATGTGTTCCTCTTTTCACTTAATACATAGGTATTTAGTGTTTCTTATACATGA

>NZ_LR735437|6|6|1706782-1706883|CRISPRCasFinder
CACTTAATACATAGGTATTTAGTGTTTTTTATACATGA	ACCTCAAGCTCATGTGTTCCTCTTTT
CACTTAATACATAGGTATTTAGTGTTTCTTATACATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_002456574.1\|1701912_1705482_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_LR735437.1\|WP_001830099.1\|1709555_1710116_-\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_LR735437.1\|WP_002456575.1\|1705608_1706346_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_LR735437.1\|WP_001830161.1\|1706921_1707656_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_LR735437.1\|WP_002469384.1\|1708576_1709554_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_LR735437.1\|WP_001830107.1\|1714931_1715120_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_LR735437.1\|WP_002436293.1\|1696613_1696964_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_LR735437.1\|WP_001830113.1\|1698957_1700325_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_LR735437.1\|WP_002469381.1\|1715842_1716487_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_LR735437.1\|WP_002456580.1\|1712526_1714185_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_LR735437.1\|WP_001830156.1\|1714199_1714574_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_LR735437.1\|WP_001829466.1\|1697069_1697807_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_LR735437.1\|WP_001830164.1\|1715202_1715838_-\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|273588
NZ_LR735437.1\|WP_002469385.1\|1707648_1708575_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_LR735437.1\|WP_002456579.1\|1710274_1712323_-\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_LR735437.1\|WP_002439483.1\|1698436_1698712_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_LR735437.1\|WP_002457379.1\|1700355_1700688_-\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_LR735437.1\|WP_001832559.1\|1697806_1698310_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_LR735437.1\|WP_001830184.1\|1706460_1706694_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_LR735437.1\|WP_002456573.1\|1700689_1701916_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_002456574.1\|1701912_1705482_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_LR735437.1\|WP_001830099.1\|1709555_1710116_-\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	1.79193e-99
NZ_LR735437.1\|WP_002456575.1\|1705608_1706346_-\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.98269e-117
NZ_LR735437.1\|WP_001830161.1\|1706921_1707656_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139
NZ_LR735437.1\|WP_002469384.1\|1708576_1709554_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	1.20323e-175
NZ_LR735437.1\|WP_001830107.1\|1714931_1715120_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_LR735437.1\|WP_002436293.1\|1696613_1696964_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_LR735437.1\|WP_001830113.1\|1698957_1700325_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_LR735437.1\|WP_002469381.1\|1715842_1716487_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	6.783e-115
NZ_LR735437.1\|WP_002456580.1\|1712526_1714185_-\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_LR735437.1\|WP_001830156.1\|1714199_1714574_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.7844e-34
NZ_LR735437.1\|WP_001829466.1\|1697069_1697807_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	7.08021e-168
NZ_LR735437.1\|WP_001830164.1\|1715202_1715838_-\|thiamine-diphosphokinase	gnl\|CDD\|273588	TIGR01378, Thiamine_pyrophosphokinase, thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	5.23977e-73
NZ_LR735437.1\|WP_002469385.1\|1707648_1708575_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.85618e-127
NZ_LR735437.1\|WP_002456579.1\|1710274_1712323_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_LR735437.1\|WP_002439483.1\|1698436_1698712_-\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_LR735437.1\|WP_002457379.1\|1700355_1700688_-\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_LR735437.1\|WP_001832559.1\|1697806_1698310_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_LR735437.1\|WP_001830184.1\|1706460_1706694_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_LR735437.1\|WP_002456573.1\|1700689_1701916_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0

>NZ_LR735437.1|WP_001830184.1|1706460_1706694_-|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_LR735437.1|WP_002456575.1|1705608_1706346_-|ribonuclease-III
MANQKKKEMVHDFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_LR735437.1|WP_002456574.1|1701912_1705482_-|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLADLKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSVVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSEHQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_LR735437.1|WP_002456573.1|1700689_1701916_-|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDYSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_LR735437.1|WP_002457379.1|1700355_1700688_-|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_LR735437.1|WP_001830113.1|1698957_1700325_-|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_LR735437.1|WP_002439483.1|1698436_1698712_-|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_LR735437.1|WP_001832559.1|1697806_1698310_-|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_LR735437.1|WP_001829466.1|1697069_1697807_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_LR735437.1|WP_002436293.1|1696613_1696964_-|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_LR735437.1|WP_001830161.1|1706921_1707656_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_LR735437.1|WP_002469385.1|1707648_1708575_-|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVSSGVLSFEDAVRIVRKRGQLMAQAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVEKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTEWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_LR735437.1|WP_002469384.1|1708576_1709554_-|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIRQAKIAGEENIVQIMKDTVGE
>NZ_LR735437.1|WP_001830099.1|1709555_1710116_-|transcription-factor-FapR
MKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_LR735437.1|WP_002456579.1|1710274_1712323_-|ATP-dependent-DNA-helicase-RecG
MSKVHLIESPYALDKIKGIGPKRLALLEELNIKSVEDLVLYLPTRYEDNTVIDLNQADDQATVTVQGEVYSSPTVAFFGRNKSKLTVHLMINHIAVKCVFFNQPYLKKKLELNSIVTIKGKWNRNKQEINGNRIFFKDQKNQEDTHLEPIYRIKEGIKQKQLRDNIRQALSDVTIHEWLTDDLREKYKLETLAYTIQTLHHPINKQNLLRARRTYAFTELFMFELRMQWLNRLEKTSDEAIEINYDINKVKQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIQLFGNTMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQYDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQSDYGNEKVGLLHGKMSAEDKDQVMQKFSEHEIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANVVEDYRMLEVARDEAAELIQSGQFFEQQYSHLREFIKQNLRHIRFD
>NZ_LR735437.1|WP_002456580.1|1712526_1714185_-|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEEEKEISVQQFAESFQAGVETAYKAVMKPVEGTILTVAKDAAKAAMDYVDQAEDCVDLMAHLIEAASESLDNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKIEAQAPKLDTESFVNDDHDFHGVINTEDIVYGYCTEMMVRFGKNKKAFDEQEFRNDMSEFGDSLLVINDDEIVKVHVHTEHPGDVFNYGQKYGELIKLKVENMREQHREVIRKEQDGLQSKEANESKTVETAIVTISVGDGIAELFKSMGATHIISGGQTMNPSTEDIVKVIEQSQCKRAIILPNNKNIMMASEQAASIVEAETVVIPTKSIPQGISALFQYDLESSLEDNKRHMSDALETVQSGSITFAVRDTKIDGIEIKKDEFMGLAEDKIVTSDVNQFHAVKGLLSKLLNEDSEILTMISGEDADNSITNQIINWIESEYPDVEVEQHEGGQPIYQYFFAVE
>NZ_LR735437.1|WP_001830156.1|1714199_1714574_-|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNDVIASVVGGKAVESYGIVGMASRQQVRDGIAEILGHDNYAKGIKVREDNGIIDVDMYIIVSYGVKISEVASNLQSTVKYTLEKTLNVKVNSINIFVQGVRVNETVKKV
>NZ_LR735437.1|WP_001830107.1|1714931_1715120_+|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNHRSHALNANKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_LR735437.1|WP_001830164.1|1715202_1715838_-|thiamine-diphosphokinase
MKINLLCSQRLLPNHIFEKEKDSNWAGIDRGALILVKQGIQPIFSVGDFDSVNNEERLMLMKNLQIEPVEAEKDDTDLALGVAQAVERGYTEITIYGATGGRLDHFMGVLQILQKPQYLHQSIKIKVIDQQNHIQLLNEGKYVINRDSTYPYISFIPLNDKTILTLQGFKYNLNQEHLNLGSTLTISNEVKVNEAIIRVEQGTVLKIRSRD
>NZ_LR735437.1|WP_002469381.1|1715842_1716487_-|ribulose-phosphate-3-epimerase
MVKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLPIDVHLMIEKPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVETILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQTSKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE

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Crispr_ID: NZ_LR735437_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_7

1888048-1888136

Orphan

Consensus_repeat	Method
AAATTCTACAGACAAGGCAAGTTTGGGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735437_7

>merge|NZ_LR735437|7|1888048-1888136|CRISPRCasFinder
AAATTCTACAGACAAGGCAAGTTTGGGTTCAGGGCCCCAACATAGAAAATTTCAAACAGAAATTCTACAGACAAGGCAAGTTGGGGTTC

>NZ_LR735437|7|7|1888048-1888136|CRISPRCasFinder
AAATTCTACAGACAAGGCAAGTTTGGGTTC	AGGGCCCCAACATAGAAAATTTCAAACAG
AAATTCTACAGACAAGGCAAGTTGGGGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_002439285.1\|1885433_1886795_-\|isochorismate-synthase	unknown	unknown	gnl\|CDD\|224091
NZ_LR735437.1\|WP_001829339.1\|1895631_1895817_+\|DUF2187-family-protein	unknown	unknown	gnl\|CDD\|227210
NZ_LR735437.1\|WP_001831666.1\|1874010_1874433_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_LR735437.1\|WP_001833065.1\|1879493_1880501_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|226122
NZ_LR735437.1\|WP_001829451.1\|1891318_1891555_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001829269.1\|1894440_1895427_-\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NZ_LR735437.1\|WP_001831688.1\|1888263_1888821_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_LR735437.1\|WP_155976037.1\|1874673_1878681_+\|glucosaminidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226656
NZ_LR735437.1\|WP_001831647.1\|1882983_1883787_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	unknown	unknown	gnl\|CDD\|274729
NZ_LR735437.1\|WP_001831691.1\|1878920_1879340_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR735437.1\|WP_001829292.1\|1894144_1894363_+\|IDEAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|378069
NZ_LR735437.1\|WP_001831637.1\|1880643_1881828_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|236075
NZ_LR735437.1\|WP_001831680.1\|1886973_1887912_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl\|CDD\|235695
NZ_LR735437.1\|WP_001831694.1\|1889051_1889267_+\|NINE-protein	unknown	unknown	gnl\|CDD\|225196
NZ_LR735437.1\|WP_001829272.1\|1893354_1893930_-\|competence-protein-ComK	unknown	unknown	gnl\|CDD\|227240
NZ_LR735437.1\|WP_001831706.1\|1882172_1882991_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl\|CDD\|180958
NZ_LR735437.1\|WP_001829449.1\|1889917_1890076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_002456621.1\|1890764_1891106_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|239587
NZ_LR735437.1\|WP_001833068.1\|1883773_1885447_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl\|CDD\|224087
NZ_LR735437.1\|WP_001829312.1\|1895822_1896425_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_002439285.1\|1885433_1886795_-\|isochorismate-synthase	gnl\|CDD\|224091	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.43286e-137
NZ_LR735437.1\|WP_001829339.1\|1895631_1895817_+\|DUF2187-family-protein	gnl\|CDD\|227210	COG4873, COG4873, Uncharacterized protein conserved in bacteria [Function unknown].	1.10558e-26
NZ_LR735437.1\|WP_001831666.1\|1874010_1874433_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.94532e-14
NZ_LR735437.1\|WP_001833065.1\|1879493_1880501_+\|acyltransferase-family-protein	gnl\|CDD\|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	8.45032e-61
NZ_LR735437.1\|WP_001829269.1\|1894440_1895427_-\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	4.78215e-112
NZ_LR735437.1\|WP_001831688.1\|1888263_1888821_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.26993e-12
NZ_LR735437.1\|WP_155976037.1\|1874673_1878681_+\|glucosaminidase-domain-containing-protein	gnl\|CDD\|226656	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].	5.39072e-72
NZ_LR735437.1\|WP_001831647.1\|1882983_1883787_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	3.04138e-117
NZ_LR735437.1\|WP_001831691.1\|1878920_1879340_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.3129e-25
NZ_LR735437.1\|WP_001829292.1\|1894144_1894363_+\|IDEAL-domain-containing-protein	gnl\|CDD\|378069	pfam08858, IDEAL, IDEAL domain. This short domain is found at the C-terminus of proteins in the UPF0302 family. The domain is named after the sequence of the most conserved region in some members. The function of this domain is unknown.	1.27638e-07
NZ_LR735437.1\|WP_001831637.1\|1880643_1881828_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|236075	PRK07683, PRK07683, aminotransferase A; Validated.	1.29333e-166
NZ_LR735437.1\|WP_001831680.1\|1886973_1887912_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	2.21468e-128
NZ_LR735437.1\|WP_001831694.1\|1889051_1889267_+\|NINE-protein	gnl\|CDD\|225196	COG2314, XynA, Predicted membrane protein [Function unknown].	5.941e-09
NZ_LR735437.1\|WP_001829272.1\|1893354_1893930_-\|competence-protein-ComK	gnl\|CDD\|227240	COG4903, ComK, Genetic competence transcription factor [Transcription].	1.24547e-76
NZ_LR735437.1\|WP_001831706.1\|1882172_1882991_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl\|CDD\|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NZ_LR735437.1\|WP_002456621.1\|1890764_1891106_-\|fatty-acid-desaturase	gnl\|CDD\|239587	cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.	3.13343e-24
NZ_LR735437.1\|WP_001833068.1\|1883773_1885447_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl\|CDD\|224087	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism].	0

>NZ_LR735437.1|WP_001831680.1|1886973_1887912_+|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MSDQYQQYSTVKKYWQLMRPHTLTAAVVPVLVGTAAAKIYLLGSEDHLKFSLFLAMLLACLLIQAATNMFNEYYDFKKGLDDHTSVGIGGAIVRNGMSPKQVMNLAIAFYIIAALLGIFLAIQSSFWIIPVGIVCMAIGYLYTGGPIPISWTPFGELFSGLFMGMIIILLSFFIQTGNVQGYAVWLSIPIVITIGLINMGNNIRDRVKDKASGRKTLPILLGKRASVIFMAIMYAIAYIIVIITAFFKPAGSLFYLLVLLSFPMPIKAVRRFNKNDTPETMMPAMAATGKTNTFFGLLYALGIYISALLGAI
>NZ_LR735437.1|WP_002439285.1|1885433_1886795_-|isochorismate-synthase
MDVNVDEQAIVDKLYESTKDWVSVEVELNKTMKPSVLFHLTEKDAGDRFYMRLNDNYSSYFGYHAIHRFKNDFENKQSIFKDWEKLKNNIELIHPHNKYHHLRLCGGFQFSSHKSDDEWREYGLNHFVLPKVLISNEGTRTYLTYTTKRQDFDLQAFKTLVAHFEQTTMDNPEEALGDVTRMEDIYKDDWRDLVKEAIDTIDDNKKIVLARRRLVKFDKKINIPYVLNRALENEKNSYIFLLEANQSIFFSQTPEQLIKVEDGVLSTKAVAGTIKRTHNEQIDNKNIEAFLKDKKNLGEHRFVVESILNDIEPFVQDVEYNETPNILKNDHMYHLYTEIKANLNDKSYIGLIDRLHPTPALGGYPKEEALDFIENKEFGTRGLYGAPVGYIDVYDDCEFIVAIRSMLIKEQQATLYAGCGIVKNSDPDSEVAETAVKFSPMMNALGVDNNDES
>NZ_LR735437.1|WP_001833068.1|1883773_1885447_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MMNHSEALTEQVFSFASELYAYGVREVVISPGSRSTPLALVFEAHPNIKTWIHPDERSAAFFALGLIKGSEKPVAILCTSGTAAANYTPAIAESQISRLPLVVLTSDRPHELRSVGAPQAINQVNMFSNYVNFQFDLPIADGSEHTIDTINYQMQIASQYLYGPHRGPIHFNLPFREPLTPDLDRVDLLTSVTKTLPHYQKSISVDDIKDILQEKNGLIIVGDMQHQAVDQILTYSTIYDLPILADPLSQLRKEKHPNVITTYDLLYRAGLNLEVDYVIRVGKPVISKKLNQWLKKTDAYQIIVQNNDQIDVFPTPPHISYEISANDFFRSLMEEPLVERKKWLQQWQSLEQQARIEISDYLKHATDEAAYVGSLIQKLTKEDTLFVGNSMPIRDVDNLLFDSEASVYANRGANGIDGVVSTALGMAAHKNVTLLIGDLSFYHDMNGLLMAKLNELHINIVLVNNNGGGIFSYLPQKRSATKYFERLFGTPTGLNFEYTALLYDFTFKRFDNLTDFKYAELSKMGSHMYEVITNRDENLHQHQNLYQKLSEIVNVTL
>NZ_LR735437.1|WP_001831647.1|1882983_1883787_-|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase
MLHYNFYESKNQSKQLLVMLHGFISDATTYHSHIERLVEHTNVLTIDLPGHGLDTSSMDEVWDFPFITRQLDEVLIQYQTYDVFLLGYSMGGRVALYYAIHGNETLSGLLLVSTSAGIQNETDKVERAQVDAARAKVLEIAGLDIFVNDWEKLPLFRSQYNLAPEIRQSIRNNRLNQDANKLAKALRDYGTGHMPNLWPHLSLIRIPTLILVGEKDKKFVQIGQQLENHLQDSHKVQISNVGHTIHVEDSTEFDTIILGFLKEEQND
>NZ_LR735437.1|WP_001831706.1|1882172_1882991_-|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MTRQWETLREYDEIKYEFFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMVRGYAIGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVEDETVKWCKDIMQHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRNPDFDQFPKFP
>NZ_LR735437.1|WP_001831637.1|1880643_1881828_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKLSLNSSSKFLRAPSIRQFSNRIKAIDDCVNLTIGQPDFPMPDVVKNAYIKAIKNDKTSYSHNKGLFETREAISQYFKRKYNFLYSEEEIIVTNGASEALDTSLRSIIEPGDDILIPGPIYAGYIPLVETLGGNPVYIDTTQSDFKVTPELIESHLTHKTKAILLNYPTNPTGVILERSEVKNIVDTLVNKHIFIISDEIYAENTFKGQHTSFAEFPEIRDQLLLIGGLSKSHSATGIRIGFLLGPEYLIEKLTFMHAYNCICANVPAQIACTTALNEGINAPLYMNRDYIERRNYLKEKLESLGFELTAQPEGAFYIFPSIKRFTENDFEFCVDVLEKAHLAMVPGSSFTDIGKGYIRISYAYDMETLKKGMHRLENYLQQHYPEQMTTPTK
>NZ_LR735437.1|WP_001833065.1|1879493_1880501_+|acyltransferase-family-protein
MTAIKDRDYFFDNARAILIFLVVLGHLLQPYTSEDKFLQALYLLIYSFHMPTFLFISGYFAKNLDKPNYLEKIAKKLLLPYVIFFAFFSLYYYFTGKEDAIQLDPFNPVFALWFLLTLFFFHVVLVIVRRYNPYIVLFISILVSVLAGFSGNIDSYMSISRTIVFFPIFFIGHLVTQSHTEKLRNKKWIPISIIILITFFIGYTIHPINGDWLLGSTPYTSLESNGEDVYSPLKRLLLYIIILLTMCAFLNLMPQTKRIYTYIGQRTMFVYLLHGIVIGVIRGFDLYPFKDQISIFTYLYLFISASVIVLILSSKWVCKWTNPFINLKRPSQFKN
>NZ_LR735437.1|WP_001831691.1|1878920_1879340_-|MarR-family-transcriptional-regulator
MYKQLEKLITLTNNDLNLVNRRFGQRTDITSEQLELLRILYNYDRLSQYDLTMKISREQSIVSRWIKKLVQKGYIMSQQSHEDLRCKELILTEEARALIQQINTARCELIEARCQCLSSDEIASLNQLLNKLNSRHIFI
>NZ_LR735437.1|WP_155976037.1|1874673_1878681_+|glucosaminidase-domain-containing-protein
MAKKFNYKLPSMVALTLFGTAFTAHQANAAEQPQNQSNHKNVLDDQTALKQAEKAKSEVTQSTTNVSGTQTYQDPTQVQPKQDTQSTTYDASLDEMSTYNEISSNQKQQSLSTDDANQNQTNSVTKNQQEETNDLTQEDKTSTDTNQLQETQSVAKENEKDLGANANNEQQDKKMTASQPSENQAIETQTASNDNESQQKSQQVTSEQNETATPKVSNTNASGYNFDYDDEDDDSSTDHLEPISLNNVNATSKQTTSYKYKEPAQRVTTNTVKKETASNQATIDTKQFTPFSATAQPRTVYSVSSQKTSSLPKYTPKVNSSINNYIRKKNMKAPRIEEDYTSYFPKYGYRNGVGRPEGIVVHDTANDNSTIDGEIAFMKRNYTNAFVHAFVDGNRIIETAPTDYLSWGAGPYGNQRFINVEIVHTHDYDSFARSMNNYADYAATQLQYYNLKPDSAENDGRGTVWTHAAISNFLGGTDHADPHQYLRSHNYSYAELYDLIYEKYLIKTKQVAPWGTTSTKPSQPSKPSGGTNNKLTVSANRGVAQIKPTNNGLYTTVYDSKGHKTDQVQKTLSVTKTATLGNNKFYLVEDYNSGKKYGWVKQGDVVYNTAKAPVKVNQTYNVKAGSTLYTVPWGTPKQVASKVSGTGNQTFKATKQQQIDKATYLYGTVNGKSGWISKYYLTTASKPSNPTKPSTNNQLTVTNNSGVAQINAKNSGLYTTVYDTKGKTTNQIQRTLSVTKAATLGDKKFYLVGDYNTGTNYGWVKQDEVIYNTAKSPVKINQTYNVKPGVKLHTVPWGTYNQVAGTVSGKGDQTFKATKQQQIDKATYLYGTVNGKSGWISKYYLTAPSKVQALSTQSTPAPKQVKPSTQTVNQIAQVKANNSGIRASVYDKTAKSGTKYANRTFLINKQRTQGNNTYVLLQNGTSNTPLGWVNINDVTTQNIGKQTQSIGKYSVKPTNNGLYSIAWGTKNQQLLAPNTLANQAFNASKAVYVGKDLYLYGTVNNRTGWIAAKDLIQNSTDAQSTPYNYTFVINNSKSYFYMDPTKANRYSLKPYYEQTFTVIKQKNINGVKWYYGQLLDGKYVWIKSTDLVKEKIKYAYTGMTLNNAINIQSRLKYKPQVQNEPLKWSNANYSQIKNAMDTKRLANDSSLKYQFLRLDQPQYLSAQALNKLLKGKGVLENQGAAFSQAARKYGLNEIYLISHALVETGNGTSQLAKGGDVSKGKFTTKTGHKYHNVFGIGAFDNNALVDGIKYAKNAGWTSVSKAIIGGAKFIGNSYVKAGQNTLYKMRWNPANPGTHQYATDINWANVNAQVLKQFYDKIGEVGKYFEIPTYK
>NZ_LR735437.1|WP_001831666.1|1874010_1874433_+|GNAT-family-N-acetyltransferase
MFQIAKNQTMLDDCFEIRKCVFVEEQGVPLENEFDQYEDYSFHIVGYINGVPMATARIRPLNTHICKIERVAIIKWYRGLGYGKNLIHAIETIAKKHQYNELTMNAQLQARDFYLKLGYSPFGKVFLEENINHISMNKFL
>NZ_LR735437.1|WP_001831688.1|1888263_1888821_-|GNAT-family-N-acetyltransferase
MIRKAKTSDNRQIAELCYLIWRDMELDITKEITKDRIIEAIELSIVNVRYRSFYEHIWVYEKDGVVAGCVIAYPGKEEMDFEQQWLKLPLEEDILQLGTPLPEKESYDDEIYIEAVVTTPKYRGQGIATQLLKYVISTHAHEKWGLNCDYDNNKARHLYHKLGFKEDATIRLYGHQYFHMTLNNK
>NZ_LR735437.1|WP_001831694.1|1889051_1889267_+|NINE-protein
MKVNKTIYIIVALILGGLGVHKFYADQVGQGILHLVFFWTGIPSVVAIIHAIIVIFTKKADEYGYITFDKK
>NZ_LR735437.1|WP_001829449.1|1889917_1890076_+|hypothetical-protein
MEKPSVLSLILLRGDNNKHTHLFVEFEEFDRANEEKHAKVEYHSSKNKTDTL
>NZ_LR735437.1|WP_002456621.1|1890764_1891106_-|fatty-acid-desaturase
MIALLFDWFVIFSSILISVTFNNILIYLVAIILIGSRMRAFDNLMHEACHRSLFTNKFWNKWITCLFVAFPVFTSYTAYRNAHHCTGFFKTTLPGFYSVVKDIFTPNYERKES
>NZ_LR735437.1|WP_001829451.1|1891318_1891555_-|hypothetical-protein
MEDYECIKSVSALEDKEKEIREKDDLLNKAVGRIENTYDNFNRLYEMAKPFKENVEIALKLLKILLKELMKKHICGKS
>NZ_LR735437.1|WP_001829272.1|1893354_1893930_-|competence-protein-ComK
MTHLPETIYVIRKGDMVIRPKYDEYQQTNGTEIIRFDQTRKESPFKVQRIIERSCKFYGNNYISKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQEENIWINMHYIENVKELKNRKSKIIFANGDSLTLNVSFHSLWHQYTNAIIYYYMVDKQSRMKSNNPEQPIDYNQSSLNIFEALSRYSLFEEN
>NZ_LR735437.1|WP_001829292.1|1894144_1894363_+|IDEAL-domain-containing-protein
MNHNTEVKYTTLEDFVMTVNDLGVELVIEEALRNARKAKLKLLIDEALINKNENDFIQYTNEFKQLEAFLSE
>NZ_LR735437.1|WP_001829269.1|1894440_1895427_-|lipoate--protein-ligase
MKFISNNNINDPSLNLAMEEYVLKNLPSEESYFLFYINRPSIIVGKNQNTIEEVNQAYIDKHQIDVVRRISGGGAVYHDTGNLNFSFITDDDGHSFHNFKKFTMPIVQALQSMGVNAEMTGRNDIQVGQAKISGNAMVKVKNRMFSHGTLMLNCDLNEVQKALKVNPAKIKSKGVKSVRKRVANIEEFLEQPIDIEEFKKIILKTIFGENEVEEYILTEEDWKNIKQLSDEKYRTWEWNYGSNPKYNIEREEKFEKGFIQIKLDVKKGRIERAKLFGDFFGEGDVTELEHALVGCLHDFEHIEEALQNYDFYHYFGDIDKYEIIRLMS
>NZ_LR735437.1|WP_001829339.1|1895631_1895817_+|DUF2187-family-protein
MTVAEVGNIVEFYDGLRGRVEKINDNSVIVDLTIMDNFNELDLPEKTVINHKRYKIVDQEG
>NZ_LR735437.1|WP_001829312.1|1895822_1896425_+|hypothetical-protein
MKNVSKALIWFVISFIIFHAILFVMWGEHQEYWYLYTGIMLIAGISYVFYQRDIASKRLLTSIGMGIITSVALIIIQLIFSLISSELSYASLIKELSRTGVYFKWQMLVTLLFVIPCHELYMRTVLQKELIKYNLPKWASILIVAICSSSLFIYLDNWWIVFFIFVAQFILSLSYEYTRRIATTTIGQIVAIILLLIFHG

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Crispr_ID: NZ_LR735437_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735437_8

2019442-2019537

Orphan

Consensus_repeat	Method
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735437_8

>merge|NZ_LR735437|8|2019442-2019537|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATGCTTGAGCTTTGCTCAGGCGTTCCTCTTTTTCACTGCAATTTTTAATTGCTAGTGTCACTTATG

>NZ_LR735437|8|8|2019442-2019537|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CTTGAGCTTTGCTCAGGCGTTCCTCTTTTT
CACTGCAATTTTTAATTGCTAGTGTCACTTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735437.1\|WP_001831939.1\|2014168_2015029_+\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_LR735437.1\|WP_001831898.1\|2011683_2012991_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_LR735437.1\|WP_002469344.1\|2022678_2023101_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_LR735437.1\|WP_001831936.1\|2018687_2018984_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LR735437.1\|WP_001831907.1\|2020672_2020996_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LR735437.1\|WP_001831965.1\|2020176_2020530_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_LR735437.1\|WP_001829623.1\|2025585_2026086_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_LR735437.1\|WP_002438979.1\|2019622_2020003_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_LR735437.1\|WP_001831944.1\|2013085_2013847_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_LR735437.1\|WP_001831968.1\|2018976_2019363_-\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_LR735437.1\|WP_001831967.1\|2015094_2015286_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_LR735437.1\|WP_002457224.1\|2027157_2027394_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001831893.1\|2015460_2015619_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001831910.1\|2016721_2017417_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_LR735437.1\|WP_001831992.1\|2017409_2018435_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_LR735437.1\|WP_001829648.1\|2023284_2023440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735437.1\|WP_001831981.1\|2021178_2021721_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_LR735437.1\|WP_002456942.1\|2015888_2016701_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_LR735437.1\|WP_002469329.1\|2026356_2026944_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_LR735437.1\|WP_002456940.1\|2021801_2022518_-\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156

Protein	Function_ID	Function_description	E-value
NZ_LR735437.1\|WP_001831939.1\|2014168_2015029_+\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	5.03423e-64
NZ_LR735437.1\|WP_001831898.1\|2011683_2012991_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	4.59041e-133
NZ_LR735437.1\|WP_002469344.1\|2022678_2023101_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	7.50293e-59
NZ_LR735437.1\|WP_001831936.1\|2018687_2018984_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.51609e-11
NZ_LR735437.1\|WP_002438979.1\|2019622_2020003_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.44293e-69
NZ_LR735437.1\|WP_001829623.1\|2025585_2026086_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	1.80445e-49
NZ_LR735437.1\|WP_001831965.1\|2020176_2020530_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.66742e-56
NZ_LR735437.1\|WP_001831944.1\|2013085_2013847_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.04582e-150
NZ_LR735437.1\|WP_001831968.1\|2018976_2019363_-\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.04994e-30
NZ_LR735437.1\|WP_001831967.1\|2015094_2015286_-\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	0.000312009
NZ_LR735437.1\|WP_001831907.1\|2020672_2020996_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.68543e-25
NZ_LR735437.1\|WP_001831910.1\|2016721_2017417_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.39327e-99
NZ_LR735437.1\|WP_001831992.1\|2017409_2018435_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.15206e-167
NZ_LR735437.1\|WP_001831981.1\|2021178_2021721_-\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	7.82596e-53
NZ_LR735437.1\|WP_002456942.1\|2015888_2016701_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	6.14824e-110
NZ_LR735437.1\|WP_002469329.1\|2026356_2026944_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.16999e-50
NZ_LR735437.1\|WP_002456940.1\|2021801_2022518_-\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	2.29802e-151

>NZ_LR735437.1|WP_001831968.1|2018976_2019363_-|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPANIICTHGTMSIDKIDNMIETLYDKQVYVLADSDDEGEKIRKWFKRYLSESEHIYVDKTFCEVAKCPKNYLAHVLSRYGFNVKKEKKLMNNLKTERLVLVNE
>NZ_LR735437.1|WP_001831936.1|2018687_2018984_-|thioredoxin-family-protein
MNKLKDIEDITVNFNKEKHLIFGYTPMCGTCKISERMLDIANEILQLPIKKIDLNFYPEWSKEKQIMSVPVLLLMRREEEIKRIYAFQSVTYLLENLK
>NZ_LR735437.1|WP_001831992.1|2017409_2018435_-|methionine-ABC-transporter-ATP-binding-protein
MIKLNQIVKRYHTKDKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLESPTSGEIIIDGDNISQLSKSQLRKKRQKVSMIFQHFNLLWSRNVLKNVTFPLEIAGVPSGLAKQKALELIELVGLKGRESAYPSELSGGQKQRVGIARALANDPDVLLCDEATSALDPQTTDEILDLLLKVREQQNLTIVLITHEMHVIRRICDEVAVMENGKVIEQGAVSKVFENPQHEVTKRFVKDDLNDDFEDSLEYLEPLDHDAYIVRLNFTGENTTEPIISYMTKTHNIDVNILEADIKNTKNGSLGFLVIHIPHISEEHFKQFKHNLHEQHVNVEVLKHG
>NZ_LR735437.1|WP_001831910.1|2016721_2017417_-|ABC-transporter-permease
MGKSYGEIFHEMVTMPNVQWPEVWQAILETLYMTVVSTLFAFVFGLILGVLLFLSAKSNSLAAKIFYTIVSFIVNLFRAIPFIILILLLIPFTSILLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTSIVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFLGDWLTNKIDKR
>NZ_LR735437.1|WP_002456942.1|2015888_2016701_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIKPINDYTTPNKLLDKGEIDANFFQHTPYLNTESKEKGYKIESAGNVELEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKLKKGVKIENAKFDDITENKKDIKFNNKQSAEYLPKIYQNQDADAVIINSNYAIDQKLSPKKDSIALESPKDNPYANLIAVKKGHKDDKNIKVLMEVLQSKEIQDYIKYKYDGAVVPAK
>NZ_LR735437.1|WP_001831893.1|2015460_2015619_+|hypothetical-protein
MKFITIKAITEKGLDKKVNQFLKSHPQIEIIKFDYQMGYSGVSVGILYRDNI
>NZ_LR735437.1|WP_001831967.1|2015094_2015286_-|CsbD-family-protein
MAEDKFEQAKGNIKETVGNATDNKELEKDGKGDKASGKAKEAVENVKEKANDVIDKFKGNKGD
>NZ_LR735437.1|WP_001831939.1|2014168_2015029_+|DUF368-domain-containing-protein
MKKFKWINIFKGFGMGTSDLVPGVSGGTIALLLGIYDDFISSISGLFSRRFWPSLKFLLPILVGMLIAIGLLSQLFNYLLSQHHIPTMLFFTGLILGIIPYLLTISNFKKNFSIIHYFILLLGIAIIVVFALLNHGDKHSGETLTLSFSLIIKYFIAGVFASSAMLLPGISGSFMLLVFGVYGTLMYAISELLHFNLNALPIILIVGFGIVTGFMISSRLIQYCLHQHPTMTFALIIGFVIGSLYAVFPGFPKDLIQWIISFFLLITGFLVSYVLGKITAKNEASF
>NZ_LR735437.1|WP_001831944.1|2013085_2013847_-|Fe-S-cluster-assembly-ATPase-SufC
MSSTLEIKDLHVSIEDKEILKGVNLTINTGEIHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELDVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGEEFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGAAE
>NZ_LR735437.1|WP_001831898.1|2011683_2012991_-|Fe-S-cluster-assembly-protein-SufD
MTTKTLNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDAYTQLTDLPKSVKEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKRQLREVIERKVSK
>NZ_LR735437.1|WP_002438979.1|2019622_2020003_-|glycine-cleavage-system-protein-GcvH
MAVPSEFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE
>NZ_LR735437.1|WP_001831965.1|2020176_2020530_-|arsenate-reductase-family-protein
MIKFYQYPKCTTCKKAAKFLDEHDVNYESIDIVQHTPTKKEFKNIVDKTGVNINKLFNTHGIKYRELNLKEKLKNMSDDEKLELLASDGMLVKRPLAISGNHLTLGFKENEYQHQWL
>NZ_LR735437.1|WP_001831907.1|2020672_2020996_+|thioredoxin-family-protein
MKNIHQTEEFNSTIGSTDPVIIKFEADWCPDCKAMDMWIDPIVEKYNNYQWYVVDRDELEDVTTENDVMGIPSILIFQNGKKLAHLHSANAKSPEQVESFLTEHLDQ
>NZ_LR735437.1|WP_001831981.1|2021178_2021721_-|nitroreductase
MELQEAISNRRSVKKFKHDMVVDDQTVYDAIYKATDAPNHGMREPWRLVHISKDKLGDFSRDITRFAFPDSPDKREDHFHAVTNLGGMLLLILKDDPRQRQSRENYFAFGAFAQNLMLLLYEAGIGTCWKSPQYIFDPKIRKALGVKDNEILAGFLYLTDLEEVPTKAKRKNKNLITEFE
>NZ_LR735437.1|WP_002456940.1|2021801_2022518_-|type-I-3-dehydroquinate-dehydratase
MTHVDIAATIAPEDKLSKTLLKDIKVNEESIDIIELRIDQWPSFNKALLNEVIKQLKIFHLKILVTYRTSVQGGKGAVNEQEYLNILGELIECPQFDMIDIEWSSAIKIEKYTHLVQRAQQKGLEVVLSHHNFQETPALDELKFIYFKMQKLNPEYLKLAVMPKCQEDVLHLLEAMSLTAKHTTCRIVGISMSSLGKVSRIAQGVFGGTLSYGCIEEPQAPGQIHVSKLKSMVSFYED
>NZ_LR735437.1|WP_002469344.1|2022678_2023101_+|organic-hydroperoxide-resistance-protein
MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAEPEVTLTVRLEDDPDAESPKLSVDIHAKVKNVLSQEDAEKYLQDAHDFCPYSKATRANIDVNLNVEVVE
>NZ_LR735437.1|WP_001829648.1|2023284_2023440_-|hypothetical-protein
MYKEYNLTQHTLPMETSVLIPTNDISRHVNDIVETIPDTEFDEFRHHCGLI
>NZ_LR735437.1|WP_001829623.1|2025585_2026086_+|GNAT-family-N-acetyltransferase
MNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTTESSD
>NZ_LR735437.1|WP_002469329.1|2026356_2026944_-|histidine-phosphatase-family-protein
MVKTLYLMRHGQTVFNLKGKIQGASDSPLTALGVQQANAAQQYFKTKNIHFDYLYSSPQQRACDTLENAVPNQRYWCVKDLKEWGFGLFEGESIELLRAIKQPRYLYGDAVVPFGGESRSEVEHRVYRALYEMMDTTDGETILAVSHGSTIGLFVRNILGYDKGSKFEIGNCNIVKFEYDGEEFIFKDLINPIKK
>NZ_LR735437.1|WP_002457224.1|2027157_2027394_+|hypothetical-protein
MSTHSQCNYVNPNSISLDWECLIISKTDMLLDGVPKELINTWLDQNVIEPFCVRNNEINFKTKDVWNALKTHNWYYSN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_LR735438.1	16266-16301	0	1.0
NZ_LR735437_1	1.2\|92894\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92894-92929	36	NZ_LR735437.1	780884-780919	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	NZ_LR735439.1	1852-1888	0	1.0
NZ_LR735437_1	1.4\|93039\|38\|NZ_LR735437\|CRISPRCasFinder,CRT	93039-93076	38	NZ_LR735438.1	5406-5443	0	1.0
NZ_LR735437_4	4.1\|538837\|34\|NZ_LR735437\|CRISPRCasFinder	538837-538870	34	NZ_LR735437.1	1241439-1241472	2	0.941

1. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to position: 16266-16301, mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

2. spacer 1.2|92894|36|NZ_LR735437|CRISPRCasFinder,CRT matches to position: 780884-780919, mismatch: 0, identity: 1.0

ttgtaccgtgtatataacttgcaagatctgaagata	CRISPR spacer
ttgtaccgtgtatataacttgcaagatctgaagata	Protospacer
************************************

3. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to position: 1852-1888, mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

4. spacer 1.4|93039|38|NZ_LR735437|CRISPRCasFinder,CRT matches to position: 5406-5443, mismatch: 0, identity: 1.0

tagtgaggggattttttaggtgtacttaaatttgtcat	CRISPR spacer
tagtgaggggattttttaggtgtacttaaatttgtcat	Protospacer
**************************************

5. spacer 4.1|538837|34|NZ_LR735437|CRISPRCasFinder matches to position: 1241439-1241472, mismatch: 2, identity: 0.941

gggttcggggccccaacaaagagaatttcaccga	CRISPR spacer
gggttcggggccccaacaaaaagaatttcactga	Protospacer
********************.**********.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP019565	Staphylococcus aureus strain SR434 plasmid pSR02, complete sequence	880-915	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KX011076	Staphylococcus aureus strain SA7112 plasmid pSA7112-1, complete sequence	2063-2098	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_LR130514	Staphylococcus aureus strain BPH2900 isolate BPH2900 plasmid 2	1941-1976	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	CP030655	Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence	13933-13968	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP047322	Staphylococcus aureus strain RJ1267 plasmid unnamed, complete sequence	587-622	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	U36911	Staphylococcus aureus plasmid pJ3356::POX7 clone 1, complete sequence	6035-6070	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	U36912	Staphylococcus aureus plasmid pJ3356::pOX7 clone 3, complete sequence	826-861	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_007792	Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence	8514-8549	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KF831357	Staphylococcus aureus strain A960649 plasmid pBU108c, complete sequence	1468-1503	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_007209	Staphylococcus aureus plasmid pWBG738, complete sequence	975-1010	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_006871	Staphylococcus lentus plasmid pSTE2, complete sequence	5430-5465	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP014417	Staphylococcus aureus strain USA300-SUR15 plasmid pUSA05-1-SUR15, complete sequence	1883-1918	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_LR735438	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2	16266-16301	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_013291	Staphylococcus aureus plasmid pWBG751, complete sequence	1904-1939	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_013305	Staphylococcus aureus plasmid SAP078B, complete sequence	284-319	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP029648	Staphylococcus aureus strain AR_0472 plasmid unnamed1, complete sequence	1712-1747	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP027424	Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed5, complete sequence	1512-1547	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_007170	Staphylococcus haemolyticus JCSC1435 plasmid pSHaeB, complete sequence	968-1003	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_019139	Staphylococcus aureus plasmid pDLK1, complete sequence	1002-1037	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_019143	Staphylococcus aureus plasmid p9b, complete sequence	692-727	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP013617	Staphylococcus aureus strain RIVM1295 plasmid pRIVM1295-1, complete sequence	1408-1443	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_LT571451	Staphylococcus epidermidis isolate BPH0662 plasmid 3	1834-1869	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP033816	Streptococcus pyogenes strain FDAARGOS_514 plasmid unnamed, complete sequence	138-173	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP039158	Staphylococcus aureus strain P10 plasmid pP10-1, complete sequence	2008-2043	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP033783	Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed2, complete sequence	1592-1627	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP025398	Staphylococcus haemolyticus strain B plasmid p83131B, complete sequence	2056-2091	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_018969	Staphylococcus aureus plasmid p19321-P01, complete sequence	975-1010	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP014395	Staphylococcus aureus strain USA300-SUR9 plasmid pUSA05-1-SUR9, complete sequence	1941-1976	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_010686	Staphylococcus aureus plasmid pKH20, complete sequence	2268-2303	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_010685	Staphylococcus aureus plasmid pKH19, complete sequence	2329-2364	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP047825	Staphylococcus aureus strain UP_1278 plasmid unnamed3, complete sequence	1962-1997	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_024963	Staphylococcus aureus plasmid pSWS371, isolate MRSA37, complete sequence	785-820	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_024964	Staphylococcus aureus plasmid pSWS372, isolate MRSA37, complete sequence	727-762	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP047832	Staphylococcus aureus strain UP_996 plasmid unnamed2, complete sequence	811-846	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP047819	Staphylococcus aureus strain UP_1433 plasmid unnamed2, complete sequence	1954-1989	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_005908	Staphylococcus aureus plasmid pE194, complete sequence	2054-2089	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP044094	Streptococcus pyogenes strain FDAARGOS_668 plasmid unnamed1	240-275	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	CP030526	Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence	20670-20705	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP010404	Staphylococcus aureus subsp. aureus strain GR2 plasmid pGR2B, complete sequence	2329-2364	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_001376	Bacillus subtilis plasmid pIM13, complete sequence	2102-2137	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_001390	Staphylococcus epidermidis plasmid pNE131, complete sequence	1429-1464	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_001395	Staphylococcus aureus strain T48 plasmid pT48, complete sequence	1038-1073	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP047816	Staphylococcus aureus strain UP_1484 plasmid unnamed, complete sequence	85-120	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_022228	Staphylococcus aureus subsp. aureus CN1 plasmid unnamed, complete sequence	733-768	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP038851	Staphylococcus aureus strain Lr2 plasmid pLr2-1, complete sequence	1002-1037	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP039165	Staphylococcus aureus strain R46 plasmid pR46-1, complete sequence	1131-1166	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_020535	Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence	8507-8542	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	MN216340	Staphylococcus aureus subsp. aureus strain SR42 plasmid pSR42, complete sequence	675-710	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	CP030559	Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence	5832-5867	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP029165	Staphylococcus aureus strain SVH7513 plasmid pSVH7513b, complete sequence	1963-1998	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	CP030487	Staphylococcus aureus strain ER03913.3 plasmid unnamed5, complete sequence	1246-1281	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_016137	Staphylococcus hyicus plasmid unnamed, complete sequence	796-831	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_016140	Staphylococcus hyicus plasmid p7313178-1, complete sequence	733-768	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP029168	Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2a, complete sequence	797-832	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP040620	Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence	12989-13024	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP053076	Staphylococcus aureus strain SA01 plasmid pSA01-tet, complete sequence	8473-8508	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251855	Staphylococcus aureus subsp. aureus strain SR100 plasmid pSR100, complete sequence	1562-1597	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251860	Staphylococcus aureus subsp. aureus strain SR383 plasmid pSR383, complete sequence	650-685	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251857	Staphylococcus aureus subsp. aureus strain SR168 plasmid pSR168, complete sequence	667-702	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251858	Staphylococcus aureus subsp. aureus strain SR241 plasmid pSR241, complete sequence	1389-1424	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251859	Staphylococcus aureus subsp. aureus strain SR265 plasmid pSR265, complete sequence	1680-1715	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MN251856	Staphylococcus aureus subsp. aureus strain SR132 plasmid pSR132, complete sequence	1135-1170	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MH423312	Staphylococcus aureus strain Sau-3893Lar plasmid pSau-3893Lar, complete sequence	2811-2846	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MH423313	Staphylococcus hominis strain Sho-115Lar plasmid pSho-115Lar, complete sequence	1447-1482	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MH423311	Staphylococcus aureus strain Sau-2716Lar plasmid pSau-2716Lar, complete sequence	2885-2920	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030382	Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence	28879-28915	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030491	Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence	28878-28914	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030388	Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence	17332-17368	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	NZ_CP031669	Staphylococcus aureus strain 199 plasmid pPS00120.1A.2, complete sequence	1098-1134	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030554	Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence	28865-28901	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030618	Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence	29062-29098	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	NC_013350	Staphylococcus aureus plasmid pWBG754, complete sequence	99-135	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030639	Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence	29072-29108	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030600	Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence	13654-13690	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030429	Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence	28880-28916	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030648	Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence	26974-27010	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030407	Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence	28877-28913	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030453	Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence	28876-28912	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	NZ_LR735439	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 3	1852-1888	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030538	Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence	34376-34412	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	CP030435	Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence	41328-41364	0	1.0
NZ_LR735437_1	1.3\|92966\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	92966-93002	37	NZ_CP043303	Staphylococcus aureus strain 16445 plasmid unnamed1, complete sequence	14046-14082	0	1.0
NZ_LR735437_1	1.4\|93039\|38\|NZ_LR735437\|CRISPRCasFinder,CRT	93039-93076	38	NZ_LR735438	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2	5406-5443	0	1.0
NZ_LR735437_1	1.4\|93039\|38\|NZ_LR735437\|CRISPRCasFinder,CRT	93039-93076	38	NZ_CP046302	Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence	5392-5429	0	1.0
NZ_LR735437_1	1.4\|93039\|38\|NZ_LR735437\|CRISPRCasFinder,CRT	93039-93076	38	NZ_CP033731	Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed1, complete sequence	24609-24646	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KU882683	Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence	11278-11314	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KT373969	Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence	36989-37025	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_002774	Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence	11837-11873	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013338	Staphylococcus aureus plasmid SAP068A, complete sequence	11457-11493	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030622	Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence	28572-28608	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013339	Staphylococcus aureus plasmid SAP069A, complete sequence	32073-32109	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013344	Staphylococcus aureus plasmid SAP082A, complete sequence	28106-28142	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP013960	Staphylococcus aureus strain V605 plasmid pV605, complete sequence	6645-6681	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030538	Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence	5229-5265	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030435	Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence	12181-12217	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030526	Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence	12181-12217	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP029674	Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence	11957-11993	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP026078	Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed	21463-21499	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KY465818	Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence	18470-18506	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KU882682	Staphylococcus lugdunensis strain K93G plasmid pK93G, complete sequence	15322-15358	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KM521836	Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence	26708-26744	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KP890694	Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence	10244-10280	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KR230047	Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence	39324-39360	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KT780704	Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence	53816-53852	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KT780705	Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence	23875-23911	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KJ922127	Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence	27172-27208	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KU882681	Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence	31901-31937	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030382	Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence	14459-14495	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030491	Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence	14459-14495	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030606	Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence	29301-29337	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013653	Staphylococcus aureus plasmid pPR9, complete sequence	13181-13217	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030388	Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence	2912-2948	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030655	Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence	7297-7333	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_007792	Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence	26883-26919	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030522	Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence	2168-2204	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_005054	Staphylococcus aureus plasmid pLW043, complete sequence	47638-47674	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030554	Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence	14459-14495	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030614	Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence	22113-22149	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030618	Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence	14459-14495	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030671	Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence	33923-33959	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	2852-2888	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_005024	Staphylococcus aureus plasmid pSK41, complete sequence	2852-2888	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	8942-8978	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013342	Staphylococcus aureus plasmid SAP079A, complete sequence	14304-14340	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013343	Staphylococcus aureus plasmid SAP080A, complete sequence	29207-29243	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	28787-28823	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030556	Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence	11468-11504	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_018967	Staphylococcus aureus plasmid p18813-P03, complete sequence	19773-19809	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030639	Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence	14459-14495	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP048644	Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence	12151-12187	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030677	Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence	20899-20935	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030600	Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence	42802-42838	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	AP012550	Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G	2882-2918	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	6184-6220	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	60180-60216	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030429	Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence	14460-14496	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030648	Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence	14458-14494	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_020535	Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence	27034-27070	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030407	Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence	14457-14493	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030559	Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence	24201-24237	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030483	Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence	9619-9655	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030678	Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence	2594-2630	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NC_013372	Staphylococcus epidermidis plasmid SAP016A, complete sequence	15384-15420	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP040620	Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence	31358-31394	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_MH587578	Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence	32743-32779	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030591	Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence	26588-26624	0	1.0
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	CP030453	Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence	14457-14493	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP026078	Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed	23214-23249	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KY465818	Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence	20222-20257	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KU882682	Staphylococcus lugdunensis strain K93G plasmid pK93G, complete sequence	17073-17108	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KT780704	Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence	55567-55602	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KT780705	Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence	25626-25661	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KU882681	Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence	33652-33687	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030382	Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence	16210-16245	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030491	Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence	16210-16245	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030606	Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence	31052-31087	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013653	Staphylococcus aureus plasmid pPR9, complete sequence	14933-14968	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030388	Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence	4663-4698	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_007792	Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence	28634-28669	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030522	Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence	3919-3954	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_005054	Staphylococcus aureus plasmid pLW043, complete sequence	49389-49424	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030554	Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence	16210-16245	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030614	Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence	23864-23899	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030618	Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence	16210-16245	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030671	Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence	35674-35709	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	4603-4638	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_005024	Staphylococcus aureus plasmid pSK41, complete sequence	4603-4638	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	10693-10728	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013342	Staphylococcus aureus plasmid SAP079A, complete sequence	16055-16090	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013343	Staphylococcus aureus plasmid SAP080A, complete sequence	30958-30993	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	30537-30572	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030556	Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence	13219-13254	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_018967	Staphylococcus aureus plasmid p18813-P03, complete sequence	21525-21560	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030639	Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence	16210-16245	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030677	Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence	22650-22685	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030600	Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence	985-1020	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_AP017321	Staphylococcus aureus strain MI plasmid pMI, complete sequence	22267-22302	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	AP012550	Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G	4633-4668	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	7935-7970	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030429	Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence	16211-16246	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030648	Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence	16209-16244	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_020535	Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence	28785-28820	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030407	Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence	16208-16243	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030559	Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence	25952-25987	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030678	Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence	4345-4380	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013372	Staphylococcus epidermidis plasmid SAP016A, complete sequence	17135-17170	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP040620	Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence	33109-33144	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_MH587578	Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence	34494-34529	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030591	Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence	28339-28374	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030453	Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence	16207-16242	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KU882683	Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence	9527-9562	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KT373969	Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence	35239-35274	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_002774	Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence	10087-10122	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013338	Staphylococcus aureus plasmid SAP068A, complete sequence	9707-9742	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030622	Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence	26822-26857	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013339	Staphylococcus aureus plasmid SAP069A, complete sequence	30323-30358	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NC_013344	Staphylococcus aureus plasmid SAP082A, complete sequence	26356-26391	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP013960	Staphylococcus aureus strain V605 plasmid pV605, complete sequence	4894-4929	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030538	Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence	3479-3514	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP026959	Staphylococcus aureus strain FDAARGOS_40 plasmid unnamed1	9878-9913	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030435	Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence	10431-10466	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030526	Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence	10431-10466	0	1.0
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP029674	Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence	10207-10242	0	1.0
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	114208-114243	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_CP026078	Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed	2975-3008	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KY465818	Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence	33451-33484	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KM521836	Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence	5703-5736	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KP890694	Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence	27113-27146	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KR230047	Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence	5840-5873	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KT780704	Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence	5387-5420	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KT780705	Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence	5387-5420	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KT373969	Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence	3486-3519	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KJ922127	Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence	4549-4582	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KU882681	Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence	7470-7503	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030382	Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence	35100-35133	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030491	Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence	35099-35132	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030606	Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence	12201-12234	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013653	Staphylococcus aureus plasmid pPR9, complete sequence	28153-28186	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030388	Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence	23553-23586	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030655	Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence	28153-28186	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_007792	Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence	13164-13197	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030522	Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence	31253-31286	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_005054	Staphylococcus aureus plasmid pLW043, complete sequence	8182-8215	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030554	Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence	35086-35119	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030614	Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence	39716-39749	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013338	Staphylococcus aureus plasmid SAP068A, complete sequence	43526-43559	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030618	Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence	35283-35316	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030671	Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence	9269-9302	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_012547	Staphylococcus aureus plasmid pGO1, complete sequence	27249-27282	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_005024	Staphylococcus aureus plasmid pSK41, complete sequence	27249-27282	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	40885-40918	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013339	Staphylococcus aureus plasmid SAP069A, complete sequence	14308-14341	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013342	Staphylococcus aureus plasmid SAP079A, complete sequence	32126-32159	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013343	Staphylococcus aureus plasmid SAP080A, complete sequence	6353-6386	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_013344	Staphylococcus aureus plasmid SAP082A, complete sequence	10506-10539	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP013960	Staphylococcus aureus strain V605 plasmid pV605, complete sequence	34820-34853	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030538	Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence	28158-28191	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	4715-4748	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030556	Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence	28965-28998	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_018967	Staphylococcus aureus plasmid p18813-P03, complete sequence	4616-4649	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030639	Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence	35293-35326	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030435	Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence	35110-35143	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_CP048644	Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence	29029-29062	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030526	Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence	33103-33136	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030600	Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence	19875-19908	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_AP017321	Staphylococcus aureus strain MI plasmid pMI, complete sequence	42288-42321	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	AP012550	Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G	23925-23958	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	30581-30614	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030429	Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence	35101-35134	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030648	Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence	33195-33228	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NC_020535	Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence	13157-13190	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030407	Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence	35098-35131	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030559	Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence	10482-10515	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030483	Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence	25368-25401	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_CP040620	Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence	17639-17672	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_MH587578	Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence	10693-10726	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030591	Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence	1757-1790	0	1.0
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	CP030453	Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence	35096-35129	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_KU882685	Staphylococcus lugdunensis strain Tlug20G-4 plasmid pT20G, complete sequence	20789-20824	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_KU882683	Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence	27929-27964	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_KM281803	Staphylococcus aureus subsp. aureus strain 11819-97 plasmid pT49, complete sequence	2531-2566	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	CP030497	Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence	19600-19635	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_007791	Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA02, complete sequence	2351-2386	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_LR735442	Staphylococcus epidermidis strain none isolate Se_BPH0711 plasmid 3	3425-3460	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013309	Staphylococcus aureus plasmid SAP093A, complete sequence	2699-2734	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013311	Staphylococcus aureus plasmid SAP094A, complete sequence	3279-3314	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP029708	Pseudomonas aeruginosa strain K34-7 plasmid pK34-7-1, complete sequence	3576-3611	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013320	Staphylococcus aureus plasmid SAP014A, complete sequence	23977-24012	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_005008	Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-01, complete sequence	2351-2386	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP025250	Staphylococcus argenteus strain XNO106 plasmid unnamed, complete sequence	8830-8865	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_010284	Staphylococcus aureus plasmid pKH17, complete sequence	2637-2672	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_HG813243	Staphylococcus epidermidis PM221 plasmid 4, complete sequence	751-786	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_024966	Staphylococcus epidermidis strain MCPSe216 plasmid pMCPSe216-01, complete sequence	3430-3465	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013452	Staphylococcus aureus subsp. aureus ED98 plasmid pT181, complete sequence	794-829	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP048645	Staphylococcus aureus strain SR153 plasmid pSR02, complete sequence	10245-10280	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_LN831038	Staphylococcus aureus strain NCTC13435 plasmid 3, complete sequence	1303-1338	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP033733	Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed2, complete sequence	2325-2360	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP040561	Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence	32432-32467	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP041000	Staphylococcus aureus strain FDAARGOS_773 plasmid unnamed2	4396-4431	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP053472	Staphylococcus warneri strain WB224 plasmid pWB224_2, complete sequence	17764-17799	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP038184	Staphylococcus aureus strain MJ015 plasmid unnamed1, complete sequence	31730-31765	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_010262	Staphylococcus aureus plasmid pKH16, complete sequence	2639-2674	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP043387	Staphylococcus aureus strain NRS384 plasmid pNRS384_1, complete sequence	3422-3457	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP039996	Staphylococcus aureus subsp. aureus M013 plasmid pM013, complete sequence	15257-15292	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_006629	Staphylococcus aureus subsp. aureus COL plasmid pT181, complete genome	3453-3488	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MK433518	Staphylococcus xylosus strain XIV 10B1 plasmid pSX10B1, complete sequence	3527-3562	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MN612109	Staphylococcus pseudintermedius strain G3C4 plasmid pSP-G3C4, complete sequence	820-855	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MH785230	Staphylococcus aureus strain ch8 plasmid pSAP060B, complete sequence	3991-4026	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MH785224	Staphylococcus aureus strain ph1 plasmid pSAP060B, complete sequence	4049-4084	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MF445422	Staphylococcus saprophyticus strain KM1053 plasmid pSSTET1, complete sequence	2370-2405	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP053184	Staphylococcus aureus strain Guangzhou-SAU071 plasmid pSAU071, complete sequence	2746-2781	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_KU882684	Staphylococcus lugdunensis strain Tlug8G-4 plasmid pT8G, complete sequence	16930-16965	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_017334	Staphylococcus aureus subsp. aureus ST398 plasmid pS0385-1, complete sequence	2756-2791	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP007658	Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence	20682-20717	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_006871	Staphylococcus lentus plasmid pSTE2, complete sequence	3582-3617	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013307	Staphylococcus aureus plasmid SAP085A, complete sequence	495-530	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP035290	Staphylococcus epidermidis strain ATCC 14990 plasmid unnamed2, complete sequence	2446-2481	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_019148	Staphylococcus aureus PM1 plasmid pPM1, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK933272	Staphylococcus aureus subsp. aureus plasmid p4456, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK933274	Staphylococcus aureus subsp. aureus plasmid p6306, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK933276	Staphylococcus aureus subsp. aureus plasmid p6530, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK933268	Staphylococcus aureus subsp. aureus plasmid p4578, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK933271	Staphylococcus aureus subsp. aureus plasmid p2575, complete sequence	2311-2346	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP047850	Staphylococcus aureus strain UP_403 plasmid unnamed, complete sequence	8607-8642	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP017683	Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence	36176-36211	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013328	Staphylococcus aureus plasmid pWBG753, complete sequence	22367-22402	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	CP040802	Staphylococcus aureus strain S15 plasmid unnamed1, complete sequence	23760-23795	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	51754-51789	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP010403	Staphylococcus aureus subsp. aureus strain GR2 plasmid pGR2A, complete sequence	25050-25085	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	MK992500	Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence	11623-11658	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_AP019722	Staphylococcus epidermidis strain NBRC 100911 plasmid pSEP1, complete sequence	1738-1773	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	CP019599	Staphylococcus cohnii strain SNUDS-2 plasmid pSC-SNUDS-2-2, complete sequence	576-611	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP054447	Staphylococcus saprophyticus strain UTI-056 plasmid pUTI-056-3, complete sequence	890-925	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	CP016074	Staphylococcus pseudintermedius strain 081661 plasmid unnamed1, complete sequence	32-67	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	CP016075	Staphylococcus pseudintermedius strain 081661 plasmid unnamed2, complete sequence	277-312	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP034113	Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence	30106-30141	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_MH068822	Staphylococcus argenteus strain XNO62 plasmid pXNO62, complete sequence	13369-13404	0	1.0
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP045473	Staphylococcus aureus strain ZY05 plasmid pZY05, complete sequence	19097-19132	0	1.0
NZ_LR735437_2	2.6\|122018\|37\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	122018-122054	37	NC_024355	Staphylococcus phage 6ec, complete genome	89516-89552	0	1.0
NZ_LR735437_3	3.3\|131205\|34\|NZ_LR735437\|CRISPRCasFinder	131205-131238	34	NZ_CP009047	Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence	35247-35280	0	1.0
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KY579373	Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence	8402-8437	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	23848-23883	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_016054	Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence	6992-7027	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_013345	Staphylococcus aureus plasmid SAP085B, complete sequence	3847-3882	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_007621	Staphylococcus saprophyticus pSES22 plasmid, isolate 44	1223-1258	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_016139	Staphylococcus hyicus plasmid p9811071-1, complete sequence	803-838	1	0.972
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_MH423314	Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence	5979-6014	1	0.972
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_KP670395	Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence	6728-6764	1	0.973
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KP670395	Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence	4976-5011	1	0.972
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	MH321491	Staphylococcus phage Twillingate, complete genome	9841-9876	1	0.972
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_KP670395	Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence	17461-17494	1	0.971
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	16435-16470	1	0.972
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_001767	Staphylococcus aureus plasmid pKH6, complete sequence	2636-2671	1	0.972
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_013312	Staphylococcus aureus plasmid SAP095B, complete sequence	1967-2002	1	0.972
NZ_LR735437_2	2.3\|121805\|36\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121805-121840	36	NC_024355	Staphylococcus phage 6ec, complete genome	87785-87820	1	0.972
NZ_LR735437_2	2.4\|121877\|34\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121877-121910	34	MH321490	Staphylococcus phage Quidividi, complete genome	6591-6624	1	0.971
NZ_LR735437_2	2.4\|121877\|34\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121877-121910	34	MH321491	Staphylococcus phage Twillingate, complete genome	6786-6819	1	0.971
NZ_LR735437_2	2.4\|121877\|34\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121877-121910	34	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	34184-34217	1	0.971
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	33891-33926	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_020183	Staphylococcus aureus subsp. aureus ST398 plasmid pUR3912, isolate C3912 complete sequence	1996-2031	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_010423	Streptococcus pyogenes isolate 9116-03 plasmid pRW35, complete sequence	664-699	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_021185	Haemophilus parasuis strain FS39 plasmid pFS39, complete sequence	3116-3151	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP032701	Streptococcus pyogenes strain TSPY556 plasmid pRW35-like, complete sequence	1581-1616	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_LR135221	Enterococcus faecium isolate E7040 plasmid 3	85179-85214	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP012742	Streptococcus agalactiae strain NGBS128 plasmid pNGBS128, complete sequence	3277-3312	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_004957	Lactobacillus sp. PC121B plasmid p121BS, complete sequence	1583-1618	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_015971	Streptococcus agalactiae strain GB2002 plasmid pGB2002, complete sequence	775-810	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_015973	Streptococcus agalactiae strain GB2001 plasmid pGB2001, complete sequence	775-810	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_024973	Streptococcus agalactiae plasmid pCCH208, complete sequence	1297-1332	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_CP013627	Staphylococcus aureus strain RIVM1183 plasmid pRIVM1183, complete sequence	3905-3940	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_019370	Streptococcus dysgalactiae subsp. equisimilis plasmid p5580, complete sequence	644-679	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NZ_KC991136	Bacillus sp. #24 plasmid pBHS24B, complete sequence	4210-4245	2	0.944
NZ_LR735437_1	1.1\|92822\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	92822-92857	36	NC_019252	Streptococcus pyogenes plasmid pGA2000, complete sequence	775-810	2	0.944
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KP890694	Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence	13131-13166	2	0.944
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_KJ922127	Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence	30059-30094	2	0.944
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	CP030655	Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence	14977-15012	2	0.944
NZ_LR735437_1	1.6\|93186\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93186-93221	36	NZ_CP048644	Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence	15037-15072	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_KM276082	Staphylococcus hyicus strain 2482 plasmid pSWS2482, complete sequence	2874-2909	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_002096	Staphylococcus aureus plasmid pKH7, complete sequence	2824-2859	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_001763	Staphylococcus aureus plasmid J3358, complete sequence	4246-4281	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NC_001393	Staphylococcus aureus plasmid pT181, complete sequence	3271-3306	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP047814	Staphylococcus aureus strain UP_1500 plasmid unnamed, complete sequence	1129-1164	2	0.944
NZ_LR735437_1	1.9\|93400\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93400-93435	36	NZ_CP053474	Staphylococcus warneri strain WB224 plasmid pWB224_4, complete sequence	1440-1475	2	0.944
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	116712-116747	3	0.917
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MN369743	Streptomyces phage Tribute, complete genome	80738-80763	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MT310865	Streptomyces phage Bmoc, complete genome	78515-78540	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MH576968	Streptomyces phage Wofford, complete genome	80704-80729	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MF358542	Streptomyces phage Sushi23, complete genome	80852-80877	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MK494112	Streptomyces phage EGole, complete genome	81544-81569	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MF347639	Streptomyces phage Samisti12, complete genome	81875-81900	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	NC_042011	Streptomyces phage Peebs, complete genome	80496-80521	4	0.846
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	NZ_CP020749	Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence	9314-9339	5	0.808
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	200447-200472	5	0.808
NZ_LR735437_6	6.1\|1706820\|26\|NZ_LR735437\|CRISPRCasFinder	1706820-1706845	26	MF358541	Streptomyces phage Warpy, complete genome	80974-80999	5	0.808
NZ_LR735437_8	8.1\|2019475\|30\|NZ_LR735437\|CRISPRCasFinder	2019475-2019504	30	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1051845-1051874	6	0.8
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	150036-150069	7	0.794
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	149133-149166	7	0.794
NZ_LR735437_2	2.7\|122091\|34\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	122091-122124	34	MT932329	Campylobacter phage F379, complete genome	32835-32868	7	0.794
NZ_LR735437_7	7.1\|1888078\|29\|NZ_LR735437\|CRISPRCasFinder	1888078-1888106	29	KY593455	Yersinia phage fHe-Yen9-01, complete genome	98506-98534	7	0.759
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	MN693551	Marine virus AFVG_25M463, complete genome	216-251	8	0.778
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	MK448572	Streptococcus satellite phage Javan61, complete genome	1921-1956	8	0.778
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	MN693566	Marine virus AFVG_25M464, complete genome	216-251	8	0.778
NZ_LR735437_1	1.7\|93258\|36\|NZ_LR735437\|CRISPRCasFinder,CRT	93258-93293	36	MN693059	Marine virus AFVG_25M422, complete genome	214-249	8	0.778
NZ_LR735437_7	7.1\|1888078\|29\|NZ_LR735437\|CRISPRCasFinder	1888078-1888106	29	NC_019909	Yersinia phage phiR1-RT complete genome	95789-95817	8	0.724
NZ_LR735437_7	7.1\|1888078\|29\|NZ_LR735437\|CRISPRCasFinder	1888078-1888106	29	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	88060-88088	8	0.724
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	MK504445	Lactobacillus phage ATCCB, complete genome	3588-3621	9	0.735
NZ_LR735437_2	2.5\|121947\|35\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121947-121981	35	NZ_CP014325	Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence	6768-6802	9	0.743
NZ_LR735437_2	2.5\|121947\|35\|NZ_LR735437\|PILER-CR,CRISPRCasFinder,CRT	121947-121981	35	MN694039	Marine virus AFVG_250M632, complete genome	19686-19720	9	0.743
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP013756	Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence	43277-43313	10	0.73
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP013752	Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence	2237-2273	10	0.73
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP013752	Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence	50312-50348	10	0.73
NZ_LR735437_1	1.5\|93113\|37\|NZ_LR735437\|CRISPRCasFinder,CRT	93113-93149	37	NZ_CP023177	Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence	12803-12839	10	0.73
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	NZ_CP013043	Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence	51808-51841	10	0.706
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	JN638751	Bacillus phage G, complete genome	37328-37361	10	0.706
NZ_LR735437_1	1.8\|93330\|34\|NZ_LR735437\|CRISPRCasFinder,CRT	93330-93363	34	JN638751	Bacillus phage G, complete genome	14749-14782	11	0.676

1. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP019565 (Staphylococcus aureus strain SR434 plasmid pSR02, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

2. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KX011076 (Staphylococcus aureus strain SA7112 plasmid pSA7112-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

3. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR130514 (Staphylococcus aureus strain BPH2900 isolate BPH2900 plasmid 2) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

4. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030655 (Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

5. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047322 (Staphylococcus aureus strain RJ1267 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

6. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to U36911 (Staphylococcus aureus plasmid pJ3356::POX7 clone 1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

7. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to U36912 (Staphylococcus aureus plasmid pJ3356::pOX7 clone 3, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

8. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007792 (Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

9. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KF831357 (Staphylococcus aureus strain A960649 plasmid pBU108c, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

10. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007209 (Staphylococcus aureus plasmid pWBG738, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

11. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_006871 (Staphylococcus lentus plasmid pSTE2, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

12. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP014417 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA05-1-SUR15, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

13. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR735438 (Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

14. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013291 (Staphylococcus aureus plasmid pWBG751, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

15. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013305 (Staphylococcus aureus plasmid SAP078B, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

16. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029648 (Staphylococcus aureus strain AR_0472 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

17. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP027424 (Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

18. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007170 (Staphylococcus haemolyticus JCSC1435 plasmid pSHaeB, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

19. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_019139 (Staphylococcus aureus plasmid pDLK1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

20. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_019143 (Staphylococcus aureus plasmid p9b, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

21. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013617 (Staphylococcus aureus strain RIVM1295 plasmid pRIVM1295-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

22. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LT571451 (Staphylococcus epidermidis isolate BPH0662 plasmid 3) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

23. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP033816 (Streptococcus pyogenes strain FDAARGOS_514 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

24. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP039158 (Staphylococcus aureus strain P10 plasmid pP10-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

25. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP033783 (Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

26. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP025398 (Staphylococcus haemolyticus strain B plasmid p83131B, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

27. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_018969 (Staphylococcus aureus plasmid p19321-P01, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

28. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP014395 (Staphylococcus aureus strain USA300-SUR9 plasmid pUSA05-1-SUR9, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

29. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010686 (Staphylococcus aureus plasmid pKH20, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

30. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010685 (Staphylococcus aureus plasmid pKH19, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

31. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047825 (Staphylococcus aureus strain UP_1278 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

32. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_024963 (Staphylococcus aureus plasmid pSWS371, isolate MRSA37, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

33. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_024964 (Staphylococcus aureus plasmid pSWS372, isolate MRSA37, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

34. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047832 (Staphylococcus aureus strain UP_996 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

35. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047819 (Staphylococcus aureus strain UP_1433 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

36. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005908 (Staphylococcus aureus plasmid pE194, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

37. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP044094 (Streptococcus pyogenes strain FDAARGOS_668 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

38. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030526 (Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

39. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP010404 (Staphylococcus aureus subsp. aureus strain GR2 plasmid pGR2B, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

40. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001376 (Bacillus subtilis plasmid pIM13, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

41. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001390 (Staphylococcus epidermidis plasmid pNE131, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

42. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001395 (Staphylococcus aureus strain T48 plasmid pT48, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

43. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047816 (Staphylococcus aureus strain UP_1484 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

44. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_022228 (Staphylococcus aureus subsp. aureus CN1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

45. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP038851 (Staphylococcus aureus strain Lr2 plasmid pLr2-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

46. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP039165 (Staphylococcus aureus strain R46 plasmid pR46-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

47. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_020535 (Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

48. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MN216340 (Staphylococcus aureus subsp. aureus strain SR42 plasmid pSR42, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

49. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030559 (Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

50. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029165 (Staphylococcus aureus strain SVH7513 plasmid pSVH7513b, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

51. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030487 (Staphylococcus aureus strain ER03913.3 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

52. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_016137 (Staphylococcus hyicus plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

53. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_016140 (Staphylococcus hyicus plasmid p7313178-1, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

54. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029168 (Staphylococcus aureus strain PTDrAP2 plasmid pPTDrAP2a, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

55. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP040620 (Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

56. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP053076 (Staphylococcus aureus strain SA01 plasmid pSA01-tet, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

57. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251855 (Staphylococcus aureus subsp. aureus strain SR100 plasmid pSR100, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

58. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251860 (Staphylococcus aureus subsp. aureus strain SR383 plasmid pSR383, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

59. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251857 (Staphylococcus aureus subsp. aureus strain SR168 plasmid pSR168, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

60. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251858 (Staphylococcus aureus subsp. aureus strain SR241 plasmid pSR241, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

61. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251859 (Staphylococcus aureus subsp. aureus strain SR265 plasmid pSR265, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

62. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN251856 (Staphylococcus aureus subsp. aureus strain SR132 plasmid pSR132, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

63. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH423312 (Staphylococcus aureus strain Sau-3893Lar plasmid pSau-3893Lar, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

64. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH423313 (Staphylococcus hominis strain Sho-115Lar plasmid pSho-115Lar, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

65. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH423311 (Staphylococcus aureus strain Sau-2716Lar plasmid pSau-2716Lar, complete sequence) position: , mismatch: 0, identity: 1.0

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcctgcatgtt	Protospacer
************************************

66. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030382 (Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

67. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030491 (Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

68. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030388 (Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

69. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP031669 (Staphylococcus aureus strain 199 plasmid pPS00120.1A.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

70. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030554 (Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

71. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030618 (Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

72. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013350 (Staphylococcus aureus plasmid pWBG754, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

73. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030639 (Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

74. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030600 (Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

75. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030429 (Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

76. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030648 (Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

77. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030407 (Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

78. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030453 (Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

79. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR735439 (Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 3) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

80. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030538 (Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

81. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030435 (Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

82. spacer 1.3|92966|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP043303 (Staphylococcus aureus strain 16445 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttaacaagttaaaaatgtatgcaaaagttaaaaaga	CRISPR spacer
tttaacaagttaaaaatgtatgcaaaagttaaaaaga	Protospacer
*************************************

83. spacer 1.4|93039|38|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR735438 (Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2) position: , mismatch: 0, identity: 1.0

tagtgaggggattttttaggtgtacttaaatttgtcat	CRISPR spacer
tagtgaggggattttttaggtgtacttaaatttgtcat	Protospacer
**************************************

84. spacer 1.4|93039|38|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP046302 (Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tagtgaggggattttttaggtgtacttaaatttgtcat	CRISPR spacer
tagtgaggggattttttaggtgtacttaaatttgtcat	Protospacer
**************************************

85. spacer 1.4|93039|38|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP033731 (Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tagtgaggggattttttaggtgtacttaaatttgtcat	CRISPR spacer
tagtgaggggattttttaggtgtacttaaatttgtcat	Protospacer
**************************************

86. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882683 (Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

87. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT373969 (Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

88. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_002774 (Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

89. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013338 (Staphylococcus aureus plasmid SAP068A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

90. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030622 (Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

91. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013339 (Staphylococcus aureus plasmid SAP069A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

92. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013344 (Staphylococcus aureus plasmid SAP082A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

93. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP013960 (Staphylococcus aureus strain V605 plasmid pV605, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

94. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030538 (Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

95. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030435 (Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

96. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030526 (Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

97. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029674 (Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

98. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026078 (Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

99. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KY465818 (Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

100. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882682 (Staphylococcus lugdunensis strain K93G plasmid pK93G, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

101. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KM521836 (Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

102. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP890694 (Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

103. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KR230047 (Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

104. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780704 (Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

105. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780705 (Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

106. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KJ922127 (Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

107. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882681 (Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

108. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030382 (Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

109. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030491 (Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

110. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030606 (Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

111. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013653 (Staphylococcus aureus plasmid pPR9, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

112. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030388 (Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

113. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030655 (Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

114. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007792 (Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

115. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030522 (Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

116. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005054 (Staphylococcus aureus plasmid pLW043, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

117. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030554 (Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

118. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030614 (Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

119. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030618 (Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

120. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030671 (Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

121. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

122. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005024 (Staphylococcus aureus plasmid pSK41, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

123. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

124. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013342 (Staphylococcus aureus plasmid SAP079A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

125. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013343 (Staphylococcus aureus plasmid SAP080A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

126. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

127. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030556 (Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

128. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_018967 (Staphylococcus aureus plasmid p18813-P03, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

129. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030639 (Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

130. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP048644 (Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

131. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030677 (Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

132. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030600 (Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

133. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to AP012550 (Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

134. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

135. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

136. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030429 (Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

137. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030648 (Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

138. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_020535 (Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

139. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030407 (Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

140. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030559 (Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

141. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030483 (Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

142. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030678 (Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

143. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013372 (Staphylococcus epidermidis plasmid SAP016A, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

144. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP040620 (Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

145. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH587578 (Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

146. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030591 (Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

147. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030453 (Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcgctaaatattttctcacaaccaaaat	Protospacer
*************************************

148. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026078 (Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

149. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KY465818 (Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

150. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882682 (Staphylococcus lugdunensis strain K93G plasmid pK93G, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

151. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780704 (Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

152. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780705 (Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

153. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882681 (Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

154. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030382 (Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

155. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030491 (Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

156. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030606 (Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

157. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013653 (Staphylococcus aureus plasmid pPR9, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

158. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030388 (Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

159. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007792 (Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

160. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030522 (Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

161. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005054 (Staphylococcus aureus plasmid pLW043, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

162. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030554 (Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

163. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030614 (Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

164. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030618 (Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

165. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030671 (Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

166. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

167. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005024 (Staphylococcus aureus plasmid pSK41, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

168. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

169. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013342 (Staphylococcus aureus plasmid SAP079A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

170. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013343 (Staphylococcus aureus plasmid SAP080A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

171. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

172. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030556 (Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

173. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_018967 (Staphylococcus aureus plasmid p18813-P03, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

174. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030639 (Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

175. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030677 (Staphylococcus aureus strain ER01533.3 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

176. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030600 (Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

177. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_AP017321 (Staphylococcus aureus strain MI plasmid pMI, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

178. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to AP012550 (Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

179. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

180. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030429 (Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

181. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030648 (Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

182. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_020535 (Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

183. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030407 (Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

184. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030559 (Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

185. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030678 (Staphylococcus aureus strain ER00573.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

186. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013372 (Staphylococcus epidermidis plasmid SAP016A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

187. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP040620 (Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

188. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH587578 (Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

189. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030591 (Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

190. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030453 (Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

191. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882683 (Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

192. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT373969 (Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

193. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_002774 (Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

194. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013338 (Staphylococcus aureus plasmid SAP068A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

195. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030622 (Staphylococcus aureus strain ER01524.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

196. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013339 (Staphylococcus aureus plasmid SAP069A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

197. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013344 (Staphylococcus aureus plasmid SAP082A, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

198. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP013960 (Staphylococcus aureus strain V605 plasmid pV605, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

199. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030538 (Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

200. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026959 (Staphylococcus aureus strain FDAARGOS_40 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

201. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030435 (Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

202. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030526 (Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

203. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029674 (Staphylococcus aureus strain AR_0219 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgatcattcatttgtttatcacttgc	Protospacer
************************************

204. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 0, identity: 1.0

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttctagttacgttgtcaatagttttttttaaatttc	Protospacer
************************************

205. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026078 (Staphylococcus aureus strain FDAARGOS_7 plasmid unnamed) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

206. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KY465818 (Staphylococcus aureus subsp. aureus strain CC1 plasmid p140355, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

207. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KM521836 (Staphylococcus epidermidis strain 12-00322 plasmid p12-00322, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

208. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP890694 (Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

209. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KR230047 (Staphylococcus epidermidis strain SP1 plasmid pSP01, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

210. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780704 (Staphylococcus aureus subsp. aureus RN4220 plasmid pRM27, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

211. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT780705 (Staphylococcus aureus subsp. aureus RN4220 plasmid pGO400, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

212. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KT373969 (Staphylococcus pseudintermedius strain HR547/11 plasmid pKM01, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

213. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KJ922127 (Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

214. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882681 (Staphylococcus lugdunensis strain Tlug15G-4 plasmid pT15G-1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

215. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030382 (Staphylococcus aureus strain ER03761.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

216. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030491 (Staphylococcus aureus strain ER02837.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

217. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030606 (Staphylococcus aureus strain ER02693.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

218. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013653 (Staphylococcus aureus plasmid pPR9, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

219. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030388 (Staphylococcus aureus strain ER01062.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

220. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030655 (Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

221. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007792 (Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA03, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

222. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030522 (Staphylococcus aureus strain ER01564.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

223. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005054 (Staphylococcus aureus plasmid pLW043, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

224. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030554 (Staphylococcus aureus strain PS00003.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

225. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030614 (Staphylococcus aureus strain ER01560.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

226. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013338 (Staphylococcus aureus plasmid SAP068A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

227. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030618 (Staphylococcus aureus strain ER04440.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

228. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030671 (Staphylococcus aureus strain ER00951.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

229. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_012547 (Staphylococcus aureus plasmid pGO1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

230. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005024 (Staphylococcus aureus plasmid pSK41, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

231. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

232. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013339 (Staphylococcus aureus plasmid SAP069A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

233. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013342 (Staphylococcus aureus plasmid SAP079A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

234. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013343 (Staphylococcus aureus plasmid SAP080A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

235. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013344 (Staphylococcus aureus plasmid SAP082A, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

236. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP013960 (Staphylococcus aureus strain V605 plasmid pV605, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

237. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030538 (Staphylococcus aureus strain ER02094.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

238. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

239. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030556 (Staphylococcus aureus strain ER03750.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

240. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_018967 (Staphylococcus aureus plasmid p18813-P03, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

241. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030639 (Staphylococcus aureus strain ER04165.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

242. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030435 (Staphylococcus aureus strain ER00610.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

243. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP048644 (Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

244. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030526 (Staphylococcus aureus strain ER02703.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

245. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030600 (Staphylococcus aureus strain ER00658.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

246. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_AP017321 (Staphylococcus aureus strain MI plasmid pMI, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

247. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to AP012550 (Staphylococcus aureus plasmid pN315G DNA, complete sequence, strain: N315G) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

248. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP026963 (Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

249. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030429 (Staphylococcus aureus strain ER03760.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

250. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030648 (Staphylococcus aureus strain ER03556.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

251. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_020535 (Staphylococcus aureus subsp. aureus ST228 plasmid pI5S5, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

252. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030407 (Staphylococcus aureus strain PS00002.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

253. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030559 (Staphylococcus aureus strain ER01457.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

254. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030483 (Staphylococcus aureus strain ER03913.3 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

255. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP040620 (Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

256. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH587578 (Staphylococcus aureus strain WG1647 plasmid pWBG615, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

257. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030591 (Staphylococcus aureus strain ER02989.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

258. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030453 (Staphylococcus aureus strain PS00001.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatttctgaatcatca	Protospacer
**********************************

259. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882685 (Staphylococcus lugdunensis strain Tlug20G-4 plasmid pT20G, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

260. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882683 (Staphylococcus lugdunensis strain Tlug33G-4 plasmid pT33G-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

261. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KM281803 (Staphylococcus aureus subsp. aureus strain 11819-97 plasmid pT49, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

262. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030497 (Staphylococcus aureus strain ER02658.3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

263. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007791 (Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA02, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

264. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR735442 (Staphylococcus epidermidis strain none isolate Se_BPH0711 plasmid 3) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

265. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013309 (Staphylococcus aureus plasmid SAP093A, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

266. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013311 (Staphylococcus aureus plasmid SAP094A, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

267. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP029708 (Pseudomonas aeruginosa strain K34-7 plasmid pK34-7-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

268. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013320 (Staphylococcus aureus plasmid SAP014A, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

269. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_005008 (Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-01, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

270. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP025250 (Staphylococcus argenteus strain XNO106 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

271. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010284 (Staphylococcus aureus plasmid pKH17, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

272. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_HG813243 (Staphylococcus epidermidis PM221 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

273. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_024966 (Staphylococcus epidermidis strain MCPSe216 plasmid pMCPSe216-01, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

274. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013452 (Staphylococcus aureus subsp. aureus ED98 plasmid pT181, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

275. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP048645 (Staphylococcus aureus strain SR153 plasmid pSR02, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

276. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LN831038 (Staphylococcus aureus strain NCTC13435 plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

277. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP033733 (Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

278. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP040561 (Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

279. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP041000 (Staphylococcus aureus strain FDAARGOS_773 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

280. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP053472 (Staphylococcus warneri strain WB224 plasmid pWB224_2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

281. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP038184 (Staphylococcus aureus strain MJ015 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

282. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010262 (Staphylococcus aureus plasmid pKH16, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

283. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP043387 (Staphylococcus aureus strain NRS384 plasmid pNRS384_1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

284. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP039996 (Staphylococcus aureus subsp. aureus M013 plasmid pM013, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

285. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_006629 (Staphylococcus aureus subsp. aureus COL plasmid pT181, complete genome) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

286. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MK433518 (Staphylococcus xylosus strain XIV 10B1 plasmid pSX10B1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

287. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MN612109 (Staphylococcus pseudintermedius strain G3C4 plasmid pSP-G3C4, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

288. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH785230 (Staphylococcus aureus strain ch8 plasmid pSAP060B, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

289. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH785224 (Staphylococcus aureus strain ph1 plasmid pSAP060B, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

290. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MF445422 (Staphylococcus saprophyticus strain KM1053 plasmid pSSTET1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

291. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP053184 (Staphylococcus aureus strain Guangzhou-SAU071 plasmid pSAU071, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

292. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KU882684 (Staphylococcus lugdunensis strain Tlug8G-4 plasmid pT8G, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

293. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_017334 (Staphylococcus aureus subsp. aureus ST398 plasmid pS0385-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

294. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP007658 (Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

295. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_006871 (Staphylococcus lentus plasmid pSTE2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

296. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013307 (Staphylococcus aureus plasmid SAP085A, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

297. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP035290 (Staphylococcus epidermidis strain ATCC 14990 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

298. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_019148 (Staphylococcus aureus PM1 plasmid pPM1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

299. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK933272 (Staphylococcus aureus subsp. aureus plasmid p4456, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

300. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK933274 (Staphylococcus aureus subsp. aureus plasmid p6306, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

301. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK933276 (Staphylococcus aureus subsp. aureus plasmid p6530, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

302. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK933268 (Staphylococcus aureus subsp. aureus plasmid p4578, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

303. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK933271 (Staphylococcus aureus subsp. aureus plasmid p2575, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

304. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047850 (Staphylococcus aureus strain UP_403 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

305. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP017683 (Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

306. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013328 (Staphylococcus aureus plasmid pWBG753, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

307. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP040802 (Staphylococcus aureus strain S15 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

308. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

309. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP010403 (Staphylococcus aureus subsp. aureus strain GR2 plasmid pGR2A, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

310. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK992500 (Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

311. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_AP019722 (Staphylococcus epidermidis strain NBRC 100911 plasmid pSEP1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

312. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP019599 (Staphylococcus cohnii strain SNUDS-2 plasmid pSC-SNUDS-2-2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

313. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP054447 (Staphylococcus saprophyticus strain UTI-056 plasmid pUTI-056-3, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

314. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP016074 (Staphylococcus pseudintermedius strain 081661 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

315. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP016075 (Staphylococcus pseudintermedius strain 081661 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

316. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP034113 (Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

317. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH068822 (Staphylococcus argenteus strain XNO62 plasmid pXNO62, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

318. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP045473 (Staphylococcus aureus strain ZY05 plasmid pZY05, complete sequence) position: , mismatch: 0, identity: 1.0

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtatttctttgctaaataaaccacc	Protospacer
************************************

319. spacer 2.6|122018|37|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 0, identity: 1.0

tgttcgtctatgccgtcataatgtaaatcacttacta	CRISPR spacer
tgttcgtctatgccgtcataatgtaaatcacttacta	Protospacer
*************************************

320. spacer 3.3|131205|34|NZ_LR735437|CRISPRCasFinder matches to NZ_CP009047 (Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

catttctatccattcaatataagtttcacgttga	CRISPR spacer
catttctatccattcaatataagtttcacgttga	Protospacer
**********************************

321. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KY579373 (Staphylococcus epidermidis strain M13/0451 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

322. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

323. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_016054 (Staphylococcus arlettae strain 2-144 plasmid pSS-03, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

324. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013345 (Staphylococcus aureus plasmid SAP085B, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttagatcgtcaattcctgcatgtt	Protospacer
***************.********************

325. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_007621 (Staphylococcus saprophyticus pSES22 plasmid, isolate 44) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

326. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_016139 (Staphylococcus hyicus plasmid p9811071-1, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

327. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_MH423314 (Staphylococcus lentus strain Sle-341Lar plasmid pSle-341Lar, complete sequence) position: , mismatch: 1, identity: 0.972

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcccgcatgtt	Protospacer
****************************.*******

328. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP670395 (Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence) position: , mismatch: 1, identity: 0.973

ctaactttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
ctaactttttcactaaatattttctcacaaccaaaat	Protospacer
***********.*************************

329. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP670395 (Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence) position: , mismatch: 1, identity: 0.972

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgttcattcatttgtttatcacttgc	Protospacer
************ ***********************

330. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 1, identity: 0.972

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttatagttacgttgtcaatagttttttttaaatttc	Protospacer
** *********************************

331. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP670395 (Staphylococcus schleiferi strain 5909-02 plasmid p5909-02, complete sequence) position: , mismatch: 1, identity: 0.971

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attaggtgttaaatcaataatctctgaatcatca	Protospacer
*********************.************

332. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 1, identity: 0.972

tccagtttcttgtatttctttgctaaataaaccacc-	CRISPR spacer
tccagtttcttgtatttctttgct-aataaaccacct	Protospacer
************************ ***********

333. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001767 (Staphylococcus aureus plasmid pKH6, complete sequence) position: , mismatch: 1, identity: 0.972

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagcttcttgtatttctttgctaaataaaccacc	Protospacer
*****.******************************

334. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_013312 (Staphylococcus aureus plasmid SAP095B, complete sequence) position: , mismatch: 1, identity: 0.972

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttatatttctttgctaaataaaccacc	Protospacer
***********.************************

335. spacer 2.3|121805|36|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 1, identity: 0.972

ttctgaaagccaacaattattttaaattcttttcgc	CRISPR spacer
ttctgaaagtcaacaattattttaaattcttttcgc	Protospacer
*********.**************************

336. spacer 2.4|121877|34|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 1, identity: 0.971

ggtgccaacctgtgccccctaaatcatttctgta	CRISPR spacer
gatgccaacctgtgccccctaaatcatttctgta	Protospacer
*.********************************

337. spacer 2.4|121877|34|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 1, identity: 0.971

ggtgccaacctgtgccccctaaatcatttctgta	CRISPR spacer
gatgccaacctgtgccccctaaatcatttctgta	Protospacer
*.********************************

338. spacer 2.4|121877|34|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 1, identity: 0.971

ggtgccaacctgtgccccctaaatcatttctgta	CRISPR spacer
gatgccaacctgtgccccctaaatcatttctgta	Protospacer
*.********************************

339. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

340. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_020183 (Staphylococcus aureus subsp. aureus ST398 plasmid pUR3912, isolate C3912 complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

341. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_010423 (Streptococcus pyogenes isolate 9116-03 plasmid pRW35, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

342. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_021185 (Haemophilus parasuis strain FS39 plasmid pFS39, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

343. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP032701 (Streptococcus pyogenes strain TSPY556 plasmid pRW35-like, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

344. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_LR135221 (Enterococcus faecium isolate E7040 plasmid 3) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

345. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP012742 (Streptococcus agalactiae strain NGBS128 plasmid pNGBS128, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

346. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_004957 (Lactobacillus sp. PC121B plasmid p121BS, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

347. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_015971 (Streptococcus agalactiae strain GB2002 plasmid pGB2002, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

348. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_015973 (Streptococcus agalactiae strain GB2001 plasmid pGB2001, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

349. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_024973 (Streptococcus agalactiae plasmid pCCH208, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

350. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013627 (Staphylococcus aureus strain RIVM1183 plasmid pRIVM1183, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

351. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_019370 (Streptococcus dysgalactiae subsp. equisimilis plasmid p5580, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

352. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KC991136 (Bacillus sp. #24 plasmid pBHS24B, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

353. spacer 1.1|92822|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_019252 (Streptococcus pyogenes plasmid pGA2000, complete sequence) position: , mismatch: 2, identity: 0.944

agctaatattgtttaaatcgtcaattcctgcatgtt	CRISPR spacer
agctaatattgtttaaatcgtcaattcttgcatatt	Protospacer
***************************.*****.**

354. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KP890694 (Staphylococcus xylosus strain 378 plasmid pSX01, complete sequence) position: , mismatch: 2, identity: 0.944

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgttcgttcatttgtttatcacttgc	Protospacer
************ **.********************

355. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KJ922127 (Staphylococcus aureus strain 417 plasmid pLRSA417, complete sequence) position: , mismatch: 2, identity: 0.944

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgttcgttcatttgtttatcacttgc	Protospacer
************ **.********************

356. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to CP030655 (Staphylococcus aureus strain ER04448.3 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgttcgttcatttgtttatcacttgc	Protospacer
************ **.********************

357. spacer 1.6|93186|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP048644 (Staphylococcus aureus strain SR153 plasmid pSR01, complete sequence) position: , mismatch: 2, identity: 0.944

catatctctttgatcattcatttgtttatcacttgc	CRISPR spacer
catatctctttgttcgttcatttgtttatcacttgc	Protospacer
************ **.********************

358. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_KM276082 (Staphylococcus hyicus strain 2482 plasmid pSWS2482, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtgtttctttgctaaacaaaccacc	Protospacer
*************.*************.********

359. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_002096 (Staphylococcus aureus plasmid pKH7, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtgtttctttgctaaacaaaccacc	Protospacer
*************.*************.********

360. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001763 (Staphylococcus aureus plasmid J3358, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagcttcttgtatctctttgctaaataaaccacc	Protospacer
*****.*********.********************

361. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NC_001393 (Staphylococcus aureus plasmid pT181, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagcttcttgtatctctttgctaaataaaccacc	Protospacer
*****.*********.********************

362. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP047814 (Staphylococcus aureus strain UP_1500 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtgtttctttgttaaataaaccacc	Protospacer
*************.********.*************

363. spacer 1.9|93400|36|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP053474 (Staphylococcus warneri strain WB224 plasmid pWB224_4, complete sequence) position: , mismatch: 2, identity: 0.944

tccagtttcttgtatttctttgctaaataaaccacc	CRISPR spacer
tccagtttcttgtgtttctttgttaaataaaccacc	Protospacer
*************.********.*************

364. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 3, identity: 0.917

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttctagttacgttgtcaatagtttttttttaaattt	Protospacer
***************************** ** **.

365. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MN369743 (Streptomyces phage Tribute, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggctcaagctcctgtgttcctctctt	Protospacer
. ********* ***********.**

366. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MT310865 (Streptomyces phage Bmoc, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
cgctcaagctcctgtgttcctctctt	Protospacer
  ********* ***********.**

367. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
tgctcaagctcctgtgttcctcattt	Protospacer
  ********* ********** ***

368. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MF358542 (Streptomyces phage Sushi23, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggctcaagctcctgtgttcctctctt	Protospacer
. ********* ***********.**

369. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MK494112 (Streptomyces phage EGole, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggctcaagctcctgtgttcctctctt	Protospacer
. ********* ***********.**

370. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MF347639 (Streptomyces phage Samisti12, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggctcaagctcctgtgttcctctctt	Protospacer
. ********* ***********.**

371. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to NC_042011 (Streptomyces phage Peebs, complete genome) position: , mismatch: 4, identity: 0.846

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggctcaagctcctgtgttcctctctt	Protospacer
. ********* ***********.**

372. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to NZ_CP020749 (Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence) position: , mismatch: 5, identity: 0.808

acctcaagctcatgtgttcctctttt	CRISPR spacer
acctcaagctcatgagttccttgata	Protospacer
************** ******.  *

373. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 5, identity: 0.808

acctcaagctcatgtgttcctctttt	CRISPR spacer
acctcaagctcatgagttccttgata	Protospacer
************** ******.  *

374. spacer 6.1|1706820|26|NZ_LR735437|CRISPRCasFinder matches to MF358541 (Streptomyces phage Warpy, complete genome) position: , mismatch: 5, identity: 0.808

acctcaagctcatgtgttcctctttt	CRISPR spacer
ggttcaagctcctgtgttcctcattt	Protospacer
. .******** ********** ***

375. spacer 8.1|2019475|30|NZ_LR735437|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

cttgagctttgctcaggcgttcctcttttt	CRISPR spacer
tttgctttttgctcaggcgttcctgttgtt	Protospacer
.***  .***************** ** **

376. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 7, identity: 0.794

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attatcaattaattcaataagttctgaatcatcg	Protospacer
****   .**** ******* ************.

377. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 7, identity: 0.794

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
attatcaattaattcaataagttctgaatcatcg	Protospacer
****   .**** ******* ************.

378. spacer 2.7|122091|34|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 7, identity: 0.794

ttcaatagcccaattaataacatctttcttcagt	CRISPR spacer
ttcaatagcccatttaattacatctgaatttaat	Protospacer
************ ***** ******   **.*.*

379. spacer 7.1|1888078|29|NZ_LR735437|CRISPRCasFinder matches to KY593455 (Yersinia phage fHe-Yen9-01, complete genome) position: , mismatch: 7, identity: 0.759

agggccccaacatagaaaatttcaaacag	CRISPR spacer
tcggtcccaacatagaaaattttaaatgt	Protospacer
  **.*****************.***..

380. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MN693551 (Marine virus AFVG_25M463, complete genome) position: , mismatch: 8, identity: 0.778

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttaaatacaccttgtcaatagttttttttaactttt	Protospacer
**  *  .** ******************** ***.

381. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MK448572 (Streptococcus satellite phage Javan61, complete genome) position: , mismatch: 8, identity: 0.778

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
gttttttgacattgtcaatagtttttttgaaatttt	Protospacer
 *.*  * **.***************** ******.

382. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MN693566 (Marine virus AFVG_25M464, complete genome) position: , mismatch: 8, identity: 0.778

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttaaatacaccttgtcaatagttttttttaactttt	Protospacer
**  *  .** ******************** ***.

383. spacer 1.7|93258|36|NZ_LR735437|CRISPRCasFinder,CRT matches to MN693059 (Marine virus AFVG_25M422, complete genome) position: , mismatch: 8, identity: 0.778

ttctagttacgttgtcaatagttttttttaaatttc	CRISPR spacer
ttaaatacaccttgtcaatagttttttttaactttt	Protospacer
**  *  .** ******************** ***.

384. spacer 7.1|1888078|29|NZ_LR735437|CRISPRCasFinder matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 8, identity: 0.724

agggccccaacatagaaaatttcaaacag	CRISPR spacer
tcagtcccaacatagaaaattttaaatgt	Protospacer
  .*.*****************.***..

385. spacer 7.1|1888078|29|NZ_LR735437|CRISPRCasFinder matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 8, identity: 0.724

agggccccaacatagaaaatttcaaacag	CRISPR spacer
tcagtcccaacatagaaaattttaaatgt	Protospacer
  .*.*****************.***..

386. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to MK504445 (Lactobacillus phage ATCCB, complete genome) position: , mismatch: 9, identity: 0.735

attaggtgttaaatcaataatttctga--atcatca	CRISPR spacer
tgcaggtgttaatacaataatttctgatgatggt--	Protospacer
  .*********  *************  ** .*

387. spacer 2.5|121947|35|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014325 (Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence) position: , mismatch: 9, identity: 0.743

catttcaatcatatcctttttaataatttttttat	CRISPR spacer
tttctttatcaaatcttttttaataattttttctt	Protospacer
. *.*. **** ***.****************. *

388. spacer 2.5|121947|35|NZ_LR735437|PILER-CR,CRISPRCasFinder,CRT matches to MN694039 (Marine virus AFVG_250M632, complete genome) position: , mismatch: 9, identity: 0.743

---catttcaatcatatcctttttaataatttttttat	CRISPR spacer
gtatatt---gctatatcctttttaaaaaattttttat	Protospacer
   .***   ...************* ** ********

389. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013756 (Lactobacillus plantarum strain DF plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctaact--ttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
--gattgcttttctttaaatattttctcacaaccagccg	Protospacer
  .*.*  ***** .********************.

390. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013752 (Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctaact--ttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
--gattgcttttctttaaatattttctcacaaccagccg	Protospacer
  .*.*  ***** .********************.

391. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013752 (Lactobacillus plantarum strain KP plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

ctaact--ttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
--gattgcttttctttaaatattttctcacaaccagccg	Protospacer
  .*.*  ***** .********************.

392. spacer 1.5|93113|37|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP023177 (Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2C, complete sequence) position: , mismatch: 10, identity: 0.73

ctaact--ttttcgctaaatattttctcacaaccaaaat	CRISPR spacer
--gattgcttttctttaaatattttctcacaaccagccg	Protospacer
  .*.*  ***** .********************.

393. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 10, identity: 0.706

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
aaattcttctacatcaataatttctaaatcatct	Protospacer
*     * .** *************.*******

394. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 10, identity: 0.706

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
atctcttgttaattcaataacttctgaatctatg	Protospacer
**.   ****** *******.*********  ..

395. spacer 1.8|93330|34|NZ_LR735437|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 11, identity: 0.676

attaggtgttaaatcaataatttctgaatcatca	CRISPR spacer
ttctttaattaaatcaataacttttgaatcattg	Protospacer
 *.    .************.**.********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1094941 : 1143203

Staphylococcus_phage(81.82%)

transposase,tRNA,integrase

attL 1085071:1085087|attR 1127878:1127894

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1085071:1085087	attL	NA	NA	NA	NA
WP_002456422.1\|1094941_1095436_-\|integrase	site-specific integrase	B7T092	Staphylococcus_virus	3.8e-67	76.1
WP_002456423.1\|1095594_1095807_+	hypothetical protein	A0A2H4JCA1	uncultured_Caudovirales_phage	7.3e-20	72.9
WP_002456424.1\|1096186_1096921_-	hypothetical protein	NA	NA	NA	NA
WP_002456426.1\|1097447_1097735_-	hypothetical protein	A0A2H4JGN1	uncultured_Caudovirales_phage	5.5e-18	50.0
WP_002456427.1\|1097896_1098562_-	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	7.0e-08	41.8
WP_002456429.1\|1099812_1101237_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.6e-173	63.9
WP_001829851.1\|1101226_1102228_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	6.9e-92	50.2
WP_002457867.1\|1102224_1102473_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.5e-36	83.1
WP_002456430.1\|1102543_1103011_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	5.5e-44	57.4
WP_002456431.1\|1102997_1103783_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.0e-99	71.3
WP_002469572.1\|1104013_1105606_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.6e-268	83.6
WP_002469576.1\|1105975_1107175_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	9.2e-192	85.1
WP_002456434.1\|1107277_1108186_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.8e-102	80.6
WP_002456435.1\|1108365_1109202_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	6.1e-110	68.6
WP_002469577.1\|1109486_1109642_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	5.2e-15	79.6
WP_104832471.1\|1109871_1111050_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.7e-60	37.0
WP_001830729.1\|1111569_1111923_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	8.5e-05	32.5
WP_001830726.1\|1111919_1112285_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.1e-34	57.0
WP_002446728.1\|1112321_1112630_-	hypothetical protein	NA	NA	NA	NA
WP_001830731.1\|1112906_1113620_+	transaldolase	M1PR54	Cyanophage	4.1e-22	37.4
WP_002456439.1\|1113759_1114203_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	9.0e-20	42.2
WP_001830734.1\|1114189_1114633_-	competence protein ComK	NA	NA	NA	NA
WP_002456440.1\|1114638_1115118_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	3.5e-25	42.3
WP_002456441.1\|1115325_1115541_+	hypothetical protein	NA	NA	NA	NA
WP_001830727.1\|1115918_1116770_+	glucosaminidase domain-containing protein	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
WP_002504914.1\|1117117_1118602_+	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
WP_002469499.1\|1119038_1120082_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	8.9e-135	66.8
WP_002467848.1\|1120088_1120721_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-87	77.6
WP_002456445.1\|1120733_1121915_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.5e-178	76.1
WP_002456446.1\|1121927_1122389_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-59	84.2
WP_002456447.1\|1122645_1123647_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.5e-131	70.0
WP_001830886.1\|1123890_1124718_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001830809.1\|1125207_1125609_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_002456448.1\|1125842_1126406_-	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	6.2e-66	65.9
WP_002456449.1\|1126402_1127356_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	9.5e-67	84.0
WP_002456450.1\|1127462_1128677_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	3.0e-182	83.5
1127878:1127894	attR	NA	NA	NA	NA
WP_001830785.1\|1128965_1131383_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.4
WP_001830891.1\|1131408_1131720_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.1e-35	71.8
WP_155976033.1\|1132124_1143203_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	2.7e-27	26.0

DBSCAN-SWA_2

1255687 : 1264806

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830787.1\|1255687_1256692_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001830755.1\|1256693_1257719_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001830840.1\|1257739_1258879_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.3e-83	44.4
WP_001830800.1\|1258894_1259155_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-06	44.3
WP_002456476.1\|1259493_1261785_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.0e-31	36.6
WP_001830033.1\|1261940_1262096_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	2.6e-14	77.6
WP_002456477.1\|1262532_1264806_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.3e-66	29.6

DBSCAN-SWA_3

1853664 : 1862134

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831672.1\|1853664_1854231_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.0
WP_001831685.1\|1854230_1855262_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.1e-64	43.4
WP_001831721.1\|1855254_1856739_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-45	31.9
WP_001831715.1\|1856717_1858907_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.7e-140	40.4
WP_001831727.1\|1858899_1859571_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_001831728.1\|1859572_1859833_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001831723.1\|1859832_1860537_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	1.6e-47	42.5
WP_002504936.1\|1860537_1861665_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001831735.1\|1861651_1862134_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	43.3

DBSCAN-SWA_4

2096328 : 2106762

uncultured_Caudovirales_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829596.1\|2096328_2097108_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6
WP_002438903.1\|2097104_2098064_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	4.1e-17	100.0
WP_002438902.1\|2098047_2099022_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.9e-165	99.7
WP_002456931.1\|2099037_2099301_-	hypothetical protein	A0A2H4IYB4	uncultured_Caudovirales_phage	5.5e-17	100.0
WP_001829597.1\|2099275_2100244_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.9e-185	100.0
WP_001829582.1\|2100362_2102468_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	100.0
WP_001829589.1\|2102430_2102829_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
WP_001829684.1\|2103583_2104459_+	DMT family transporter	NA	NA	NA	NA
WP_001832596.1\|2104472_2104973_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
WP_002438897.1\|2105256_2106762_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	34.0

DBSCAN-SWA_5

2128185 : 2138721

Staphylococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830323.1\|2128185_2129337_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	7.5e-26	39.6
WP_001830349.1\|2129326_2129914_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001830328.1\|2130210_2130882_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	4.1e-64	55.7
WP_001830341.1\|2130886_2131306_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_001830330.1\|2131306_2132020_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.6e-55	44.8
WP_001830331.1\|2132122_2132722_+	hypothetical protein	NA	NA	NA	NA
WP_001830315.1\|2133071_2133227_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	9.8e-14	75.5
WP_001830329.1\|2133822_2134260_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001830332.1\|2134310_2134784_+	DoxX family protein	NA	NA	NA	NA
WP_001830352.1\|2134758_2135448_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-34	35.2
WP_025987135.1\|2135450_2136503_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.0e-17	30.6
WP_001830351.1\|2136572_2137679_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	6.3e-62	43.2
WP_001830355.1\|2137881_2138721_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-60	43.0

DBSCAN-SWA_6

2230175 : 2294042

Staphylococcus_phage(38.81%)

capsid,head,terminase,tRNA,portal,tail,holin,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002456919.1\|2230175_2231837_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_002458357.1\|2231833_2232250_-	DUF1934 family protein	NA	NA	NA	NA
WP_104832450.1\|2232504_2233683_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2
WP_002445784.1\|2234299_2234692_-	hypothetical protein	NA	NA	NA	NA
WP_002445783.1\|2234774_2235797_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	1.6e-35	28.6
WP_002504949.1\|2236085_2237354_+	nickel-dependent lactate racemase	NA	NA	NA	NA
WP_001832048.1\|2237373_2238201_+	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
WP_001832104.1\|2238215_2238992_+	nickel pincer cofactor biosynthesis protein LarB	NA	NA	NA	NA
WP_001832070.1\|2238988_2240176_+	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
WP_001832182.1\|2240262_2240769_-	YwhD family protein	NA	NA	NA	NA
WP_001832138.1\|2240825_2242124_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	5.5e-25	30.9
WP_001832180.1\|2242215_2242692_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001832122.1\|2243140_2243815_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.2e-125	97.3
WP_001832161.1\|2244025_2244595_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001832065.1\|2244944_2245889_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001832045.1\|2245912_2248594_-	MMPL family transporter	NA	NA	NA	NA
WP_001832085.1\|2249054_2249993_-	aldo/keto reductase	NA	NA	NA	NA
WP_001832072.1\|2250149_2250572_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_002504951.1\|2250869_2252333_-	N-acetylmuramoyl-L-alanine amidase	A0A0N6WMR3	Staphylococcus_phage	2.2e-208	72.7
WP_002504952.1\|2252342_2252639_-\|holin	phage holin	A0A2I6PF56	Staphylococcus_phage	3.0e-35	80.2
WP_002504953.1\|2252678_2253218_-	hypothetical protein	A1BU75	Staphylococcus_virus	9.3e-27	44.0
WP_002475504.1\|2253217_2253727_-	hypothetical protein	A1BU74	Staphylococcus_virus	2.4e-93	100.0
WP_155976039.1\|2255597_2256224_-	hypothetical protein	A0A1W6JQ05	Staphylococcus_phage	5.1e-53	53.4
WP_064582290.1\|2256670_2257066_-	hypothetical protein	A0A1W6JQP0	Staphylococcus_phage	8.5e-54	81.7
WP_155976040.1\|2257049_2257484_-	hypothetical protein	A0A1W6JQR9	Staphylococcus_phage	4.5e-64	81.9
WP_155976041.1\|2257519_2257660_-	XkdX family protein	A0A1W6JPA9	Staphylococcus_phage	2.0e-18	97.8
WP_155976042.1\|2257661_2258000_-	hypothetical protein	A1BU70	Staphylococcus_virus	1.9e-57	98.2
WP_016050384.1\|2258004_2259537_-\|plate	BppU family phage baseplate upper protein	I6SML9	Staphylococcus_virus	2.8e-262	100.0
WP_002505166.1\|2259536_2262203_-	hypothetical protein	I6T7F4	Staphylococcus_virus	0.0e+00	99.8
WP_049371040.1\|2262217_2264074_-\|tail	phage tail protein	A0A1W6JPD0	Staphylococcus_phage	0.0e+00	99.7
WP_016050381.1\|2264087_2265026_-\|tail	phage tail family protein	I6SAU4	Staphylococcus_virus	4.1e-179	100.0
WP_155976043.1\|2265041_2268146_-\|terminase	terminase	I6TJQ3	Staphylococcus_virus	1.0e-303	97.3
WP_001830305.1\|2268148_2268451_-	hypothetical protein	A0A1W6JP91	Staphylococcus_phage	2.0e-47	100.0
WP_155976044.1\|2268513_2269008_-	hypothetical protein	A0A141VTN3	Staphylococcus_phage	8.6e-88	99.4
WP_002439225.1\|2269067_2269607_-\|tail	tail protein	I6TFT7	Staphylococcus_virus	1.5e-96	99.4
WP_002505168.1\|2269593_2270031_-	DUF3168 domain-containing protein	I6SAT8	Staphylococcus_virus	5.5e-78	99.3
WP_001830232.1\|2270043_2270457_-	HK97 gp10 family phage protein	A0A1W6JP98	Staphylococcus_phage	1.5e-77	100.0
WP_001830290.1\|2270449_2270779_-\|head	phage head closure protein	A0A1W6JP84	Staphylococcus_phage	9.6e-59	100.0
WP_001830262.1\|2270771_2271086_-\|head,tail	phage head-tail connector protein	A0A1W6JPF5	Staphylococcus_phage	2.0e-53	100.0
WP_046026329.1\|2271085_2271376_-	Rho termination factor N-terminal domain-containing protein	A0A1W6JPC2	Staphylococcus_phage	5.9e-44	97.9
WP_155976045.1\|2271392_2272223_-\|capsid	N4-gp56 family major capsid protein	A1BU56	Staphylococcus_virus	6.0e-150	99.6
WP_103433368.1\|2272240_2272837_-	phage scaffolding protein	A1BU55	Staphylococcus_virus	3.2e-68	99.0
WP_047499965.1\|2272951_2273158_-	hypothetical protein	A0A141VTM4	Staphylococcus_phage	8.1e-24	83.8
WP_155976046.1\|2273160_2274114_-\|capsid	minor capsid protein	A0A141VTM3	Staphylococcus_phage	2.0e-173	98.1
WP_155976047.1\|2274070_2275507_-\|portal	phage portal protein	A1BU53	Staphylococcus_virus	1.8e-279	99.4
WP_155976048.1\|2275512_2276778_-\|terminase	PBSX family phage terminase large subunit	A1BTV3	Staphylococcus_virus	9.8e-245	98.8
WP_016050394.1\|2276761_2277196_-\|terminase	terminase small subunit	I6SB37	Staphylococcus_virus	2.6e-72	100.0
WP_002439197.1\|2277646_2278063_-	hypothetical protein	A0A1W6JP87	Staphylococcus_phage	9.2e-75	100.0
WP_001830276.1\|2278080_2278299_-	hypothetical protein	A0A1W6JP79	Staphylococcus_phage	1.0e-32	100.0
WP_002469471.1\|2278302_2278443_-	hypothetical protein	A0A141VTT7	Staphylococcus_phage	1.1e-16	100.0
WP_049371055.1\|2278442_2278829_-	hypothetical protein	A0A1W6JPB1	Staphylococcus_phage	8.6e-67	100.0
WP_152905499.1\|2278830_2279004_-	regulator	I6TG55	Staphylococcus_virus	2.7e-20	86.0
WP_002497595.1\|2279108_2279411_+	DUF4870 domain-containing protein	A0A2H4J741	uncultured_Caudovirales_phage	1.2e-31	73.0
WP_155976049.1\|2279501_2280131_-	hypothetical protein	A0A2R3ZXK9	Staphylococcus_phage	1.7e-67	56.1
WP_155976058.1\|2280141_2280459_-	hypothetical protein	A0A2H4JG35	uncultured_Caudovirales_phage	1.7e-49	93.3
WP_002502872.1\|2280606_2280993_-	hypothetical protein	A0A2H4J9W1	uncultured_Caudovirales_phage	2.1e-65	100.0
WP_002502873.1\|2281011_2281191_-	hypothetical protein	I6SB80	Staphylococcus_virus	1.7e-25	100.0
WP_103433716.1\|2281238_2281919_-	hypothetical protein	I6TK14	Staphylococcus_virus	2.8e-129	98.2
WP_103433715.1\|2281921_2282551_-	HNH endonuclease	A0A2H4J5T2	uncultured_Caudovirales_phage	3.2e-119	100.0
WP_155976050.1\|2282498_2282942_-	DUF3310 domain-containing protein	A0A2H4JCG6	uncultured_Caudovirales_phage	3.2e-65	81.0
WP_155976051.1\|2282938_2283298_-	hypothetical protein	A0A1W6JPB9	Staphylococcus_phage	6.5e-61	97.5
WP_002504980.1\|2283298_2283490_-	hypothetical protein	A0A2H4JBZ6	uncultured_Caudovirales_phage	4.0e-25	90.5
WP_002475557.1\|2283490_2283898_-	RusA family crossover junction endodeoxyribonuclease	I6T7K9	Staphylococcus_virus	3.2e-72	98.5
WP_155976052.1\|2283906_2284152_-	hypothetical protein	I6TK11	Staphylococcus_virus	3.3e-40	98.8
WP_155976053.1\|2284129_2284351_-	hypothetical protein	A0A2H4J7L3	uncultured_Caudovirales_phage	2.1e-33	93.2
WP_001830247.1\|2284347_2285595_-	AAA family ATPase	A0A2H4JBL8	uncultured_Caudovirales_phage	8.0e-231	99.5
WP_002456374.1\|2285584_2285938_-	hypothetical protein	A0A2H4J8T3	uncultured_Caudovirales_phage	3.2e-52	100.0
WP_002439167.1\|2285943_2286645_-	helix-turn-helix domain-containing protein	I6T7K7	Staphylococcus_virus	2.0e-122	100.0
WP_002439166.1\|2286641_2287316_-	hypothetical protein	I6TFZ8	Staphylococcus_virus	4.3e-130	100.0
WP_155976054.1\|2287329_2287752_-	single-stranded DNA-binding protein	I6SN68	Staphylococcus_virus	6.7e-73	99.3
WP_002439164.1\|2287751_2288396_-	ERF family protein	I6TJU2	Staphylococcus_virus	2.0e-116	100.0
WP_001830261.1\|2288388_2288613_-	DUF2483 family protein	A0A2H4JDF3	uncultured_Caudovirales_phage	3.2e-34	100.0
WP_021298917.1\|2288584_2288860_-	chordopoxvirus fusion protein	A0A2H4JFH5	uncultured_Caudovirales_phage	3.6e-11	73.6
WP_002502886.1\|2289193_2289358_-	hypothetical protein	A0A2H4J688	uncultured_Caudovirales_phage	2.3e-21	100.0
WP_002502887.1\|2289371_2290124_-	phage antirepressor KilAC domain-containing protein	I6SN64	Staphylococcus_virus	3.3e-139	99.2
WP_155976055.1\|2290136_2290583_-	hypothetical protein	Q4ZCB1	Staphylococcus_virus	9.9e-59	74.3
WP_049401132.1\|2290621_2290840_-	hypothetical protein	A0A2H4J2S7	uncultured_Caudovirales_phage	1.8e-13	53.5
WP_053091513.1\|2291008_2291320_+	helix-turn-helix transcriptional regulator	A0A1D6Z276	Staphylococcus_phage	2.9e-25	56.2
WP_049371062.1\|2291332_2291803_+	ImmA/IrrE family metallo-endopeptidase	A0A1W6JPB4	Staphylococcus_phage	5.9e-86	99.4
WP_049371064.1\|2291799_2292615_+	DUF5067 domain-containing protein	A0A1W6JP83	Staphylococcus_phage	1.2e-115	98.2
WP_155976056.1\|2292665_2294042_+	recombinase family protein	A0A1W6JP94	Staphylococcus_phage	9.4e-249	96.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LR735439

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR735438

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

2. NZ_LR735437

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_LR735439

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection