CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_LR735441	Staphylococcus epidermidis strain none isolate Se_BPH0711 plasmid 2	0 crisprs	csa3	0	0	1
NZ_LR735442	Staphylococcus epidermidis strain none isolate Se_BPH0711 plasmid 3	0 crisprs	NA	0	0	0
NZ_LR735440	Staphylococcus epidermidis strain none isolate Se_BPH0711 chromosome 1	3 crisprs	csa3,WYL,DEDDh,cas3,DinG	1	2	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR735440_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735440_1

634316-634398

Orphan

Consensus_repeat	Method
AAACAGAAGCAAAACAATCTATGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735440_1

>merge|NZ_LR735440|1|634316-634398|CRISPRCasFinder
AAACAGAAGCAAAACAATCTATGATTGTTAGTGGCTCTTATGCATTTTTGAAAAATGTAAACAGAAGCAAAACTATCTATGAT

>NZ_LR735440|1|1|634316-634398|CRISPRCasFinder
AAACAGAAGCAAAACAATCTATGAT	TGTTAGTGGCTCTTATGCATTTTTGAAAAATGT
AAACAGAAGCAAAACTATCTATGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735440.1\|WP_001831516.1\|638822_639200_-\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_LR735440.1\|WP_002438338.1\|634518_634869_-\|DUF4889-domain-containing-protein	unknown	unknown	gnl\|CDD\|374445
NZ_LR735440.1\|WP_002438333.1\|631672_632302_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_LR735440.1\|WP_002438353.1\|643701_643971_+\|DUF1775-domain-containing-protein	unknown	unknown	gnl\|CDD\|260082
NZ_LR735440.1\|WP_002438356.1\|644992_645394_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_LR735440.1\|WP_002456059.1\|627217_628252_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_LR735440.1\|WP_107508710.1\|643994_644294_+\|transporter	unknown	unknown	gnl\|CDD\|260082
NZ_LR735440.1\|WP_002438349.1\|640888_641836_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_LR735440.1\|WP_001831592.1\|626755_627208_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|379056
NZ_LR735440.1\|WP_002438326.1\|628280_628937_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LR735440.1\|WP_010959272.1\|625475_626066_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_LR735440.1\|WP_002438321.1\|626058_626736_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_LR735440.1\|WP_002438330.1\|631062_631509_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR735440.1\|WP_002438342.1\|635554_637660_-\|AraC-family-transcriptional-regulator-Rsp	unknown	unknown	gnl\|CDD\|197666
NZ_LR735440.1\|WP_001831504.1\|644507_644924_+\|DUF2871-domain-containing-protein	unknown	unknown	gnl\|CDD\|378551
NZ_LR735440.1\|WP_002456063.1\|639353_640799_+\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_LR735440.1\|WP_001831482.1\|632425_632791_+\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_LR735440.1\|WP_002456062.1\|635059_635482_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|226389
NZ_LR735440.1\|WP_002438328.1\|629193_630357_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_LR735440.1\|WP_002456060.1\|632955_634236_+\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|183075

Protein	Function_ID	Function_description	E-value
NZ_LR735440.1\|WP_001831516.1\|638822_639200_-\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	1.02229e-28
NZ_LR735440.1\|WP_002438338.1\|634518_634869_-\|DUF4889-domain-containing-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	6.96685e-27
NZ_LR735440.1\|WP_002438333.1\|631672_632302_+\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	1.05694e-58
NZ_LR735440.1\|WP_002438353.1\|643701_643971_+\|DUF1775-domain-containing-protein	gnl\|CDD\|260082	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.	2.90826e-15
NZ_LR735440.1\|WP_002438356.1\|644992_645394_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.40673e-08
NZ_LR735440.1\|WP_002456059.1\|627217_628252_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.43496e-57
NZ_LR735440.1\|WP_107508710.1\|643994_644294_+\|transporter	gnl\|CDD\|260082	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.	6.46551e-11
NZ_LR735440.1\|WP_002438349.1\|640888_641836_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.20836e-108
NZ_LR735440.1\|WP_001831592.1\|626755_627208_+\|GAF-domain-containing-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	2.00355e-05
NZ_LR735440.1\|WP_002438326.1\|628280_628937_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.04431e-76
NZ_LR735440.1\|WP_010959272.1\|625475_626066_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	4.33596e-51
NZ_LR735440.1\|WP_002438321.1\|626058_626736_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	7.03174e-110
NZ_LR735440.1\|WP_002438330.1\|631062_631509_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.29821e-18
NZ_LR735440.1\|WP_002438342.1\|635554_637660_-\|AraC-family-transcriptional-regulator-Rsp	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.26611e-18
NZ_LR735440.1\|WP_001831504.1\|644507_644924_+\|DUF2871-domain-containing-protein	gnl\|CDD\|378551	pfam11070, DUF2871, Protein of unknown function (DUF2871). This family of proteins has no known function.	1.93795e-46
NZ_LR735440.1\|WP_002456063.1\|639353_640799_+\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_LR735440.1\|WP_001831482.1\|632425_632791_+\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	9.91056e-13
NZ_LR735440.1\|WP_002456062.1\|635059_635482_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	6.16351e-40
NZ_LR735440.1\|WP_002438328.1\|629193_630357_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	3.11888e-109
NZ_LR735440.1\|WP_002456060.1\|632955_634236_+\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	3.75555e-163

>NZ_LR735440.1|WP_002456060.1|632955_634236_+|cation:dicarboxylase-symporter-family-transporter
MALFKKKISLPTQVIIALVLGVIAGLLLYGQDDVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKVGSYGWKAILYFEIITTIAIGLGLIIGNLFKPGSGLDPDKLPKGDITKYQSSAHSAEQATTYGNHLIDTLVHIVPTNLFESMAKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLFKLLVVVVFAMVFFVIVVLGIVARMVGISIFSIMKILKSELLLAFSTSSSEAVLPIMMKKMERFGSPKDVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYDIHLSLTEQLVLMATLMIASKGMAGVPGVSIVVLLTTLTSMNITAQGLALIIGIDRLLDMVRTCVNVIGNALSTVVIAKWENVYDKEKGQNYLNSI
>NZ_LR735440.1|WP_001831482.1|632425_632791_+|DUF3139-domain-containing-protein
MSKKQVIFRVIIILIISLILAIAFFFGLKAYQGHKNLELIDSYMSDHHLNDKVKKDKTSYSTKKGLYYKEVVFKDEPNVTYVIQPISTSKGIFIEGFDSETKKSIKKAKHSDFDQKYKPSK
>NZ_LR735440.1|WP_002438333.1|631672_632302_+|nitroreductase-family-protein
MTRINDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVESDEMKEKVKESFGFNSRQLTTSSAMLIIFGDLQNYEKAEQIYGDAVEQQLMTEDIKAQLLDWILPYYKNLSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDSDRYLPVLAIAIGKKAQDAHDSVRLRIDDVREFL
>NZ_LR735440.1|WP_002438330.1|631062_631509_-|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYTDYLKEYGLTYTGYIVLMAIEDDEKLNIKKLGERVFLDSGTLTPLLKKLEKKNYVIRTREEQDERNLQISLTERGKDIQNVLSDISQSVFNEFNITQEETQNLVEDLQNFVTKNFDKTVEK
>NZ_LR735440.1|WP_002438328.1|629193_630357_+|NarK/NasA-family-nitrate-transporter
MNMKKGVSQLTLQTLSLVAGFMAWSIISPLMPFISQDVDISPGQISVILAIPVILGSVLRVPFGYLTNIVGAKWVFFWSFIVLLLPIFLLGQAQSPGMLMLSGFFLGIGGAIFSVGVTSVPKYFSKDKVGLANGIYGVGNIGTAVSSFCAPVLAGAIGWQNTVRSYLIILSIFAILMFFLGDKNEPKVKIPLMAQVKDLSKNYKLYYLSLWYFITFGAFVAFGIFLPNFLVDHFSIDKVDAGIRSGIFIALATFLRPVGGVIGDKFNAVQALIIDFVIMIIGALILSLSSHIVLFTIGCLAISICAGIGNGLIFKLAPSYFSKEAGSANGIVSMMGGLGGFFPPLVITFVTSITGSSHLAFFFLAIFGVIALITMIHLNKKEKAIRI
>NZ_LR735440.1|WP_002438326.1|628280_628937_+|response-regulator-transcription-factor
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF
>NZ_LR735440.1|WP_002456059.1|627217_628252_+|sensor-histidine-kinase
MLEQTDLSLEQLLKNYYETTNEKIVFVNRQGKIIAMNDAAKDILTEEDNYNAMTNAICHRCEGYSNEYDVQSCKDCFLETTQLQHSNFQVFMKTKDNEIKPFTAMYQNIDEQRGISAFTLQNVAPQIERQEKMYQQKMLHRSIQAQENERKRISRELHDSVIQDMLNIDVELRLLKYKHRDKVLAETSQRIEGLLSQLIDDIRNMSVELRPSSLDDLGIEAAFKSYFKQFEENYGMHIKYDSNIKGMRFDNEIETVVYRVVQEGVFNALKYAEVNEIEVSTHSDGKQLVAEVVDRGKGFSLDHHPKGSGLGLYGMRERAELVNGHVNIETHINRGTIITLDIPI
>NZ_LR735440.1|WP_001831592.1|626755_627208_+|GAF-domain-containing-protein
MEPESLKHNQHLQMNLDKLRAQEGYDFGGIALYDYHHTSSPIKWQYVSGNTNDRYKLIILRKGRGLAGMVMKTGKRMVIADVDTALSPEEKVKFPIILSESLTAVVAVPLWLENSMYGVLLLGQRNHQPLPQSLDQLNIEKQIGIFTEIN
>NZ_LR735440.1|WP_002438321.1|626058_626736_+|respiratory-nitrate-reductase-subunit-gamma
MLNQFVWVIYPYLCLAIFVIGHIARYKYDQFSWTAKSSEMIEKKRLKWGSLLFHLGIIPVFFGHVVGLLIPANWLEAIGVNNHIYHIGAVYIGSVFGIITLIGMLLLTLRRLSIKNVRRLSSFSDIFVNIVLLIILIMGCYSTLVTNAIQPEFDYRQTIAIWFRHLFMFSPNADLMLNVPWSFKLHILLGFTVFACWPFTRLVHVWSVPLSYMNRRYIVYRKNKI
>NZ_LR735440.1|WP_010959272.1|625475_626066_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MEGSSVINLEQLSLYQDSLGYLGQQMNFPEKMTFHPKIFEETISKSHPGYEDLLAYREVMMNYTLSEIKAIYTDTFDFSKKHPLYMTFNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDFLPLMLQFLQVADFKNDSRAQENLQLVIMIIEDGTYEMANTLAENNNPYAYVVSALRKTLKACIVPLKEVENHA
>NZ_LR735440.1|WP_002438338.1|634518_634869_-|DUF4889-domain-containing-protein
MKNKKGLGIGLITIMIIVCIVLVIMMFVGGKKESYYGIMKDSTTIDKMINTKNEKIEKNVELPKDANVSVKKEDFVMLFKDEKTGKITKVKKVNHDDVPHGLMSKIHDMGNMKHGM
>NZ_LR735440.1|WP_002456062.1|635059_635482_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MNKQQVTKAIEKVLNSSKIGVLSTAHHNKPNSRYMVFYNDDLNLYTKTNINSLKVEEIENNPDAHILLGYNETTNNSFVEIDATIEVVKNQKVIDWLWETQDKTFFNSKEDPELCVLKVIPRSIKLMNDDELDTPATIEL
>NZ_LR735440.1|WP_002438342.1|635554_637660_-|AraC-family-transcriptional-regulator-Rsp
MTCFLNIYKEYHSPPERNINRIILMFSLTNDLKITINGETKDLGNHIAIINQSDIYFINSASNLVLLSIPVIYFYSKDNKFFKCYFDRHLLQSSSFVKTIILQAIQHLIKGENQDEQSISKIIQTLLKEAVIRYKKKYIPQIAVNHSVFTEGLTFIHSKVSQSLSLREVAQHCNISESYCSNLFARYLNMNFKDYFTSLKVIDSIKRLLSSEDSINAISEQSGFSSHTNFTNQFKNYLGCSPKQYRTIISKLDSLPSISFSDTDFSQYIDLINQFEFSDHLATETTERDINEFYPQDQTKNSKAFIRFQNFNELFQFVFNEYYNIDFTSLPQAVIFINDITDISTREVNFNLLNRCFEKLFEKNIGLAMRLTSTNEFESIKEIILLFLNSHQDYKMNKKMVKFMLVFETKNMSVNDIHLCHLKIKNKNKAIRYSITVEGLLHQNSSIDRTYDMMKRLNFDYYFIDIENLETKNSLITKRKSYLHSSTHFENYKQFILDSGIPSTKFVYNNLSLKCFKYTNNGTYPLQLSDLVCHLVALMRYGGGVSYQLIEDESPFIALFNRYGSPLPLMHLYKLIEPFLNEPLEIANNFLMSRKDGNYHFLLFNKINDRYLSDSQQRYVFKNTLSTNSLIIIKTLNHEHGAIQNLLPQTKQQFYIERSILDELDKSNQPKTELAIQHDHHLPFQVTLKHDEVKYICFKPS
>NZ_LR735440.1|WP_001831516.1|638822_639200_-|YbgA-family-protein
MKERGKIEKLWREEKYRVLFHDQNAYHSIRTLLKSPTTLGEVKEHITHALTITPTKGSVINAFEHMWGYFKKQCTQYEKQHSRELKALYIENQIDYFELLSFLKNLADKYAVEYLQQSTILNITK
>NZ_LR735440.1|WP_002456063.1|639353_640799_+|PTS-sucrose-transporter-subunit-IIBC
MSYKKSAEEILKAIGGEENLDAMAHCATRLRLVLNDESKVDEDTLSNMDVVKGTFSTGGQYQIIIGSGTVNKVFNELEKITGKEASTTSEVKDKSSKHMNPFQKFVKMLSDIFVPIIPAIVAGGLLMGLNNIFTAKDLFYDGKSIIDVHSQFSGLADMINIFANAPFTLLPILIGFSAAKRFGGNPYLGAALGMILVHPGLMSAYDFPKALEEGKAIPHWDVFGLHINEVGYQGQVLPMLVATYILATIEKWLRKVIPTVLDNLLTPLLSIFITAFITFLFVGPVTRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNIAQGGAALAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAVAGSGIGAAYISFFKVKAIALGTAGLPGFISINPTHAGWLHYLIGMLIAFVVSVVVTLVLSRRKTNKTAVES
>NZ_LR735440.1|WP_002438349.1|640888_641836_-|magnesium-transporter-CorA-family-protein
MITAYKHALHHPSQIIETEINHSASWINVVEPDREEIEGLMEFYNIPEDFIRDPLDSEESARIEYDEDTGYSLIIIDLPIVNSTNRRVLSFVTIPLGIIIGNGIVMTVCDAENEFLENFAKQEDINLKFHSRFALEILTTIANHYNRNLRLLNKSRIRIERELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLVIENNQAIETTELHQRILESITSSYASLLSNDMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDHSYVSWIIVVGISLILVAIVSIFLWKKQKL
>NZ_LR735440.1|WP_002438353.1|643701_643971_+|DUF1775-domain-containing-protein
MLRKLLLLTFIVFWGIGFFKYADAHVTLNPNESEPESYDKYDVRVPVEQNDHTMKVELDVPKGLNVESVKPIEGFKHHFLKIKKGTLLK
>NZ_LR735440.1|WP_107508710.1|643994_644294_+|transporter
MGPHEFIEFPIVVANPKKEGTFKWNATQTYDNGDVVKWTGKEDSAHPTPTTTVKKGANPNDTHSDSSQGDSIVLWIVAIVAIVISLIALFKQAHPKKFN
>NZ_LR735440.1|WP_001831504.1|644507_644924_+|DUF2871-domain-containing-protein
MRRLLYSFLFYMVIGLLSGFYYRELTKAHDFVGDTQLSLVHTHTLILGMFMFLLLLPLEKVFKLSSYYLFNWFFFVYHLGVLITISMMTVKGTFQVIGKKFSPEMFAGFAGIGHTGMLAGLLLLFFLLRQAILTEPKK
>NZ_LR735440.1|WP_002438356.1|644992_645394_+|GNAT-family-N-acetyltransferase
MTKIHFEAPSPEDYCNLRANAGMSSKSIEAAIKGLPHACFNVTLYENDMLIGMGRVIGDGGTVFQIVDIAVKDIYQGLGHGMAIMHEIMKYIESVAEEGTYVSLIADYPADQLYEKFGFKSTEPYSKGMYIKY

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Crispr_ID: NZ_LR735440_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735440_2

2041845-2041940

Orphan

Consensus_repeat	Method
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735440_2

>merge|NZ_LR735440|2|2041845-2041940|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATGCTTGAGCTTTGCTCAGGCGTTCCTCTTTTTCACTGCAATTTTTAATTGCTAGTGTCACTTATG

>NZ_LR735440|2|2|2041845-2041940|CRISPRCasFinder
CACTGCAATTTTTAATTGCTTGTGTCACTTATG	CTTGAGCTTTGCTCAGGCGTTCCTCTTTTT
CACTGCAATTTTTAATTGCTAGTGTCACTTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735440.1\|WP_001831907.1\|2043075_2043399_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LR735440.1\|WP_002457221.1\|2045081_2045504_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_LR735440.1\|WP_001831893.1\|2037863_2038022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_001831968.1\|2041379_2041766_-\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_LR735440.1\|WP_001831981.1\|2043581_2044124_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_LR735440.1\|WP_001831936.1\|2041090_2041387_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_LR735440.1\|WP_002438979.1\|2042025_2042406_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_LR735440.1\|WP_001831974.1\|2044204_2044921_-\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_LR735440.1\|WP_001829623.1\|2046428_2046929_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_LR735440.1\|WP_002456122.1\|2039812_2040838_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_LR735440.1\|WP_002438988.1\|2039124_2039820_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_LR735440.1\|WP_162161215.1\|2045687_2045825_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_001831965.1\|2042579_2042933_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_LR735440.1\|WP_001831939.1\|2036571_2037432_+\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_LR735440.1\|WP_001829615.1\|2047199_2047787_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_LR735440.1\|WP_155978848.1\|2048000_2048237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_002438990.1\|2038291_2039104_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_LR735440.1\|WP_001831967.1\|2037497_2037689_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_LR735440.1\|WP_002438995.1\|2034086_2035394_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_LR735440.1\|WP_001831944.1\|2035488_2036250_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473

Protein	Function_ID	Function_description	E-value
NZ_LR735440.1\|WP_001831907.1\|2043075_2043399_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.68543e-25
NZ_LR735440.1\|WP_002457221.1\|2045081_2045504_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	2.58332e-60
NZ_LR735440.1\|WP_001831968.1\|2041379_2041766_-\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.04994e-30
NZ_LR735440.1\|WP_001831981.1\|2043581_2044124_-\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	7.82596e-53
NZ_LR735440.1\|WP_001831936.1\|2041090_2041387_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.51609e-11
NZ_LR735440.1\|WP_002438979.1\|2042025_2042406_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.44293e-69
NZ_LR735440.1\|WP_001831974.1\|2044204_2044921_-\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.58421e-151
NZ_LR735440.1\|WP_001829623.1\|2046428_2046929_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	1.80445e-49
NZ_LR735440.1\|WP_002456122.1\|2039812_2040838_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.39191e-167
NZ_LR735440.1\|WP_002438988.1\|2039124_2039820_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.21879e-99
NZ_LR735440.1\|WP_001831965.1\|2042579_2042933_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.66742e-56
NZ_LR735440.1\|WP_001831939.1\|2036571_2037432_+\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	5.03423e-64
NZ_LR735440.1\|WP_001829615.1\|2047199_2047787_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.38205e-50
NZ_LR735440.1\|WP_002438990.1\|2038291_2039104_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	1.91141e-110
NZ_LR735440.1\|WP_001831967.1\|2037497_2037689_-\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	0.000312009
NZ_LR735440.1\|WP_002438995.1\|2034086_2035394_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	2.49596e-133
NZ_LR735440.1\|WP_001831944.1\|2035488_2036250_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.04582e-150

>NZ_LR735440.1|WP_001831968.1|2041379_2041766_-|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPANIICTHGTMSIDKIDNMIETLYDKQVYVLADSDDEGEKIRKWFKRYLSESEHIYVDKTFCEVAKCPKNYLAHVLSRYGFNVKKEKKLMNNLKTERLVLVNE
>NZ_LR735440.1|WP_001831936.1|2041090_2041387_-|thioredoxin-family-protein
MNKLKDIEDITVNFNKEKHLIFGYTPMCGTCKISERMLDIANEILQLPIKKIDLNFYPEWSKEKQIMSVPVLLLMRREEEIKRIYAFQSVTYLLENLK
>NZ_LR735440.1|WP_002456122.1|2039812_2040838_-|methionine-ABC-transporter-ATP-binding-protein
MIKLNQIVKRYHTKDKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLESPTSGEIIIDGDNISQLSKSQLRKKRQKVSMIFQHFNLLWSRSVLKNVTFPLEIAGVPSGLAKQKALELIELVGLKGRESAYPSELSGGQKQRVGIARALANDPDVLLCDEATSALDPQTTDEILDLLLKVREQQNLTIVLITHEMHVIRRICDEVAVMENGKVIEQGAVSKVFENPQHEVTKRFVKDDLNDDFEDSLEYLEPLDHDAYIVRLNFTGENTTEPIISYMTTTHNIDVNILEADIKNTKNGSFGFLVIHIPHISEEHFKQFKHNLHEQHVNVEVLKHG
>NZ_LR735440.1|WP_002438988.1|2039124_2039820_-|ABC-transporter-permease
MGKSYGEIFHEMATMPNVQWPEVWQAILETLYMTIVSTLFAFVLGLILGVLLFLSAKSNSLAAKIFYTIVSFIVNLFRAIPFIILILLLIPFTSILLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTSIVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFLGDWLTNKIDKR
>NZ_LR735440.1|WP_002438990.1|2038291_2039104_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIKPINDYTTPNKLLDKGEIDANFFQHTPYLNTESKEKGYKIESAGNVELEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKLKKGVKIENAKFDDITENKKDIKFNNKQSAEYLPKIYQNQDADAVIINSNYAIDQKLSPKKDSIALESPKDNPYANLIAVKKGHKDDKNIKVLMEVLQSKEIQDYIKDKYDGAVVPAK
>NZ_LR735440.1|WP_001831893.1|2037863_2038022_+|hypothetical-protein
MKFITIKAITEKGLDKKVNQFLKSHPQIEIIKFDYQMGYSGVSVGILYRDNI
>NZ_LR735440.1|WP_001831967.1|2037497_2037689_-|CsbD-family-protein
MAEDKFEQAKGNIKETVGNATDNKELEKDGKGDKASGKAKEAVENVKEKANDVIDKFKGNKGD
>NZ_LR735440.1|WP_001831939.1|2036571_2037432_+|DUF368-domain-containing-protein
MKKFKWINIFKGFGMGTSDLVPGVSGGTIALLLGIYDDFISSISGLFSRRFWPSLKFLLPILVGMLIAIGLLSQLFNYLLSQHHIPTMLFFTGLILGIIPYLLTISNFKKNFSIIHYFILLLGIAIIVVFALLNHGDKHSGETLTLSFSLIIKYFIAGVFASSAMLLPGISGSFMLLVFGVYGTLMYAISELLHFNLNALPIILIVGFGIVTGFMISSRLIQYCLHQHPTMTFALIIGFVIGSLYAVFPGFPKDLIQWIISFFLLITGFLVSYVLGKITAKNEASF
>NZ_LR735440.1|WP_001831944.1|2035488_2036250_-|Fe-S-cluster-assembly-ATPase-SufC
MSSTLEIKDLHVSIEDKEILKGVNLTINTGEIHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELDVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGEEFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGAAE
>NZ_LR735440.1|WP_002438995.1|2034086_2035394_-|Fe-S-cluster-assembly-protein-SufD
MTTKTLNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDAYTQLTDLPKSVKEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKRGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKRQLREVIERKVSK
>NZ_LR735440.1|WP_002438979.1|2042025_2042406_-|glycine-cleavage-system-protein-GcvH
MAVPSEFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE
>NZ_LR735440.1|WP_001831965.1|2042579_2042933_-|arsenate-reductase-family-protein
MIKFYQYPKCTTCKKAAKFLDEHDVNYESIDIVQHTPTKKEFKNIVDKTGVNINKLFNTHGIKYRELNLKEKLKNMSDDEKLELLASDGMLVKRPLAISGNHLTLGFKENEYQHQWL
>NZ_LR735440.1|WP_001831907.1|2043075_2043399_+|thioredoxin-family-protein
MKNIHQTEEFNSTIGSTDPVIIKFEADWCPDCKAMDMWIDPIVEKYNNYQWYVVDRDELEDVTTENDVMGIPSILIFQNGKKLAHLHSANAKSPEQVESFLTEHLDQ
>NZ_LR735440.1|WP_001831981.1|2043581_2044124_-|nitroreductase
MELQEAISNRRSVKKFKHDMVVDDQTVYDAIYKATDAPNHGMREPWRLVHISKDKLGDFSRDITRFAFPDSPDKREDHFHAVTNLGGMLLLILKDDPRQRQSRENYFAFGAFAQNLMLLLYEAGIGTCWKSPQYIFDPKIRKALGVKDNEILAGFLYLTDLEEVPTKAKRKNKNLITEFE
>NZ_LR735440.1|WP_001831974.1|2044204_2044921_-|type-I-3-dehydroquinate-dehydratase
MTHVDIAATIAPEDKLSKTLLKDIKVNEESIDIIELRIDQWPSFNKALLNEVIKQLKIFHLKILVTYRTSVQGGKGAVNEQEYLNILGELIECPQFDMIDIEWSSAVKIEKYTHLVQRAQQKGLEVVLSHHNFQETPALDELKFIYFKMQKLNPEYLKLAVMPKCQEDVLHLLEAMSLTAKHTTCRIVGISMSSLGKVSRIAQGVFGGTLSYGCIEEPQAPGQIHVSKLKSMVSFYED
>NZ_LR735440.1|WP_002457221.1|2045081_2045504_+|organic-hydroperoxide-resistance-protein
MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAEPEVTLTVRLEDDPDAESPKLSVDIHAKVKNVLSQEDAEKYLQDAHDFCPYSKATRGNIDVNLNVEVVE
>NZ_LR735440.1|WP_162161215.1|2045687_2045825_-|hypothetical-protein
MTQHTLPMETSVLIPTNDISRHVNDIVETIPDTEFDEFRHHCGLI
>NZ_LR735440.1|WP_001829623.1|2046428_2046929_+|GNAT-family-N-acetyltransferase
MNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTTESSD
>NZ_LR735440.1|WP_001829615.1|2047199_2047787_-|histidine-phosphatase-family-protein
MVKTLYLMRHGQTVFNLKGKIQGASDSPLTALGVQQANAAQQYFKTKNIHFDYLYSSPQQRACDTLENAVPNQQYWCVKDLKEWGFGLFEGESIELLRAIKQPRYLYGDAVVPFGGESRSEVEHRVYRALYEMMDTTDGETILAVSHGSTIGLFVRNILGYDKGSKFEIGNCNIVKFEYDGEEFIFKDLINPIKK
>NZ_LR735440.1|WP_155978848.1|2048000_2048237_+|hypothetical-protein
MSTHSQCNYVNPNSISLDWECLIISKTDMLLDGVPKELINTWLDQNVIEPFCVRNNEINFKTKDVWNALKTRNWYYSN

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Crispr_ID: NZ_LR735440_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR735440_3

2471906-2471994

Orphan

Consensus_repeat	Method
CAGTGAAATTCTCTTTGTTGGGACCCCATCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR735440_3

>merge|NZ_LR735440|3|2471906-2471994|CRISPRCasFinder
CAGTGAAATTCTCTTTGTTGGGACCCCATCCCCAACTTGCTTTGCTTGTTGAATTTCTCAGTGAAATTCTCTTTGTTGGGGCCCCATCC

>NZ_LR735440|3|3|2471906-2471994|CRISPRCasFinder
CAGTGAAATTCTCTTTGTTGGGACCCCATCC	CCAACTTGCTTTGCTTGTTGAATTTCT
CAGTGAAATTCTCTTTGTTGGGGCCCCATCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR735440.1\|WP_001831345.1\|2475973_2476270_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_LR735440.1\|WP_002437185.1\|2471496_2471874_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_002437189.1\|2472232_2472823_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_LR735440.1\|WP_001831336.1\|2477961_2479059_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_LR735440.1\|WP_001829400.1\|2462665_2463331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_002437166.1\|2467073_2467853_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226480
NZ_LR735440.1\|WP_002437175.1\|2470653_2471277_+\|NDxxF-motif-lipoprotein	unknown	unknown	gnl\|CDD\|380196
NZ_LR735440.1\|WP_001829411.1\|2462130_2462538_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_LR735440.1\|WP_002455899.1\|2466177_2466933_-\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_LR735440.1\|WP_001831354.1\|2475154_2475397_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_LR735440.1\|WP_002437170.1\|2468297_2468867_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_LR735440.1\|WP_001829387.1\|2463456_2464359_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380149
NZ_LR735440.1\|WP_002437191.1\|2472843_2473476_-\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_LR735440.1\|WP_002437194.1\|2474425_2474686_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_002437162.1\|2464667_2466056_+\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_LR735440.1\|WP_002437208.1\|2476654_2477464_+\|lysozyme	unknown	unknown	gnl\|CDD\|119383
NZ_LR735440.1\|WP_001831333.1\|2475441_2475951_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|168659
NZ_LR735440.1\|WP_001831355.1\|2477537_2477729_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR735440.1\|WP_155978855.1\|2468881_2470405_+\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
NZ_LR735440.1\|WP_001832461.1\|2473949_2474204_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170

Protein	Function_ID	Function_description	E-value
NZ_LR735440.1\|WP_001831345.1\|2475973_2476270_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	4.8221e-36
NZ_LR735440.1\|WP_002437189.1\|2472232_2472823_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	6.36506e-46
NZ_LR735440.1\|WP_001832461.1\|2473949_2474204_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.06396e-07
NZ_LR735440.1\|WP_002437175.1\|2470653_2471277_+\|NDxxF-motif-lipoprotein	gnl\|CDD\|380196	NF033193, lipo_NDxxF, NDxxF motif lipoprotein. Members of this family are lipoproteins, about 200 amino acids long in precursor form, found in Staphylococcus aureus, Bacillus cereus, and various other Firmicutes. The protein family is named for one of its several highly conserved motifs.	3.08114e-79
NZ_LR735440.1\|WP_001829411.1\|2462130_2462538_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	1.18912e-16
NZ_LR735440.1\|WP_002455899.1\|2466177_2466933_-\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.49022e-90
NZ_LR735440.1\|WP_001831354.1\|2475154_2475397_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.06497e-43
NZ_LR735440.1\|WP_002437170.1\|2468297_2468867_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	1.42852e-125
NZ_LR735440.1\|WP_001829387.1\|2463456_2464359_+\|hypothetical-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	0.000708705
NZ_LR735440.1\|WP_002437191.1\|2472843_2473476_-\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	3.46805e-35
NZ_LR735440.1\|WP_002437162.1\|2464667_2466056_+\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_LR735440.1\|WP_002437208.1\|2476654_2477464_+\|lysozyme	gnl\|CDD\|119383	cd06523, GH25_PlyB-like, PlyB is a bacteriophage endolysin that displays potent lytic activity toward Bacillus anthracis. PlyB has an N-terminal glycosyl hydrolase family 25 (GH25) catalytic domain and a C-terminal bacterial SH3-like domain, SH3b. Both domains are required for effective catalytic activity. Endolysins are produced by bacteriophages at the end of their life cycle and participate in lysing the bacterial cell in order to release the newly formed progeny. Endolysins (also referred to as endo-N-acetylmuramidases or peptidoglycan hydrolases) degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.	5.24151e-55
NZ_LR735440.1\|WP_001831333.1\|2475441_2475951_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|168659	PRK06751, PRK06751, single-stranded DNA-binding protein; Provisional.	7.31904e-63
NZ_LR735440.1\|WP_001831336.1\|2477961_2479059_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_LR735440.1\|WP_155978855.1\|2468881_2470405_+\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
NZ_LR735440.1\|WP_002437166.1\|2467073_2467853_+\|hypothetical-protein	gnl\|CDD\|226480	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism].	7.67998e-54

>NZ_LR735440.1|WP_002437185.1|2471496_2471874_+|hypothetical-protein
MKIRLTFIILAILSTIGLVLVLAKYPTGPHTINYNEPYTVLIAITTIVIMALPALILGIFNHLACRIISAILQISALMMWGFLVIISLIMGQIVIMLMASLTILALLVSSIVTLSVHPSTSDKIN
>NZ_LR735440.1|WP_002437175.1|2470653_2471277_+|NDxxF-motif-lipoprotein
MKKRVITYLILALSLTLAACSNTNDNNNQEHHSNAHAPKNAKTLKEKDIFSSNKKGQKISEKEMKQALEKYLQANSDVLDNKYVMQHKLDKQSDSNPKITESQADRLSKLSNLAVKNDLHFKKFIKNNHIPEEYKDPTDRIINYFHALNSTISNVDEDIEKLNYQPQNSINVVDVPTKYSGDVNKKQQDKITTFLKKKGIDTEVFNK
>NZ_LR735440.1|WP_155978855.1|2468881_2470405_+|alkyl-hydroperoxide-reductase-subunit-F
MLNADLKQQLQQLLELMEGDVEFVASLGSDDKSNELKELLNEMAEMSAHITITEKSLKRTPSSSVNRPGEETGITFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKGLEGPFHFETFVSLTCQKCPDVVQALNLMSVINPNITHTMIDGAVFREESENIMAVPAVFLDGQEFGNGRMTVQDILTKLGSTQDASEFNDKDPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAEHIAQYDIDTMTGIRATNIEKTDSAIRVTLENDAVLESKTVIISTGASWRKLNIPGEDRLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVKHVTLFEYASELKADSVLQERLRSLPNVDIKTSAKTTEVIGDDYVTGISYEDMTTGESQVVNLDGIFVQIGLVPNTSWLQNAVELNERGEVMINRDNATNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN
>NZ_LR735440.1|WP_002437170.1|2468297_2468867_+|peroxiredoxin
MSLINKEILPFTAQAYDPKKDEFKEVTQEDFKGSWNVVCFYPADFSFVCPTELEDLQNQYAKLQELGVNVYSVSTDTHFVHKAWHDHSDAISKLEYSMIGDPSQTITRNFDVLDEETGLAQRGTFIIDPDGVVQAAEINADGIGRDASTLVNKIKAAQYVRQHPGEVCPAKWEEGSESLQPGLDLVGKI
>NZ_LR735440.1|WP_002437166.1|2467073_2467853_+|hypothetical-protein
MTLTNKEVAKVLFKAYRYKKPIDFISENYQLNEEEAYHVQEELIDQLTFKDRSTVTGYKVSMTSKATQAIANTNEPAYGTLLSNQIVNDGASVSLSELFSPLLEPEIIFIVQEDLPYDADLETIRYHTRIAPGIEIPDARYKNWFPNFTLSDLISDNTATGLVVVGDPVDGLDNDAFANVHLNLYKDDKCIATGESSKVLGNPLNAIHWLIKKLHTHGKQLKKGDIISSGTFISPLKLEYGTYRAEYSGIGKVSFSVNK
>NZ_LR735440.1|WP_002455899.1|2466177_2466933_-|NADPH-dependent-oxidoreductase
MSDYVYELMKQHHSVRKFKNQPLGSETVEKLVEAGQSASTSSYLQTYSIIGVEDPSIKARLKEVSGQPYVLDNGYLFVFVLDYYRHHLVDEVAASNMETSYGSAEGLLVGTIDVALVAQNMAVAAEDMGYGIVYLGSLRNDVARVREILNLPDYTFPLFGMAVGEPSDEENGSPKPRLPFKHIFHKDQYDANQHQQRKELEAYDQVVSEYYKERTHGVRTENWSQQIETFLGRKTRLDMLDELKKAGFIQR
>NZ_LR735440.1|WP_002437162.1|2464667_2466056_+|L-cystine-transporter
MEILFTVINVIVLLVFLIMLNIMARKHVSFPKRVFTALAIGIVFGIVLHLIYGAESKTLEQSTDWFSIVGDGYVALLQMIVMPLIFISIVAAFSKIQIGEKFAKIGSYIFMFLIGTVAIAAIVGIFYALIFGLDASSIDLGSAEHSRGTEISKQAKDLTANTLPQQILEVFPSNPFLDFTGQRTTSTIAVVIFATFVGFAYLRVARKQPEHGSLLKRGIEAIYSIVMAIVTFVLRLTPYGILAIMASTLATSDFSAIWTLGKFLIASYAALITMYIIHLIILSVLGINPVKYVKKTIEVLIFAFTSRSSAGALPLNVQTQTKRLGVPEGIANFSATFGLSIGQNGCAGIYPAMLAVMVAPVANVEIDFQFVVTLITVVIISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISIEPLIDMGRTALNVNDSMLAGTGTARLTNHWDKKTFDSNDYGDLSAN
>NZ_LR735440.1|WP_001829387.1|2463456_2464359_+|hypothetical-protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYHLSKTEYRGREATDFKEDDIELFTDIANKVKQTNSYDLAFEELEKEKDFLQVIVKDEDSQLPTDQNVAQLVEDLRSEIQKMREERQMLGQMINQVHQQQQELKELQTDITTKLDSNAQSLKSIQNSQEAIQSAQEQQSKDIAKANELKDSELRSHFDSMSNSASISQSNVASQSTTASLSQSESANDSMSSSLSESNSITSESNTNSKSEIESKSTSTSEFLSESGSVSNSEKSESISHSQSTSATPSSQSTYQQQPKEEKKGFFARLFNL
>NZ_LR735440.1|WP_001829400.1|2462665_2463331_+|hypothetical-protein
MEFKVIESAKDPLFNEALKLYDDKLDIGLDEDSKIFKRSLENNKTENDYAFIVGIENQTVVSLATAHYEATTNSAFLIYLIAKESPNHDERMSLTLEAIEKQLNLLSQEVHNRDINFIMLEVPKEPSTANIDDKLRNALEHRRQFLFENQFEKQDDIDYIHPNQNQEETPQKVDLFIKANIELTKDIYGTSVKSNYILKYVFANGISREIIYPLLKEMNLR
>NZ_LR735440.1|WP_001829411.1|2462130_2462538_+|general-stress-protein
MAKITVVNNQDELYKVINQKKSEGYLETELAVISKSKLHLDDLHNSQISLMATSGSFSDRMSRLLTGEDGEETVLSRYDLTDNELEGYKQDILNDKMLVVANSDRSSHDEVEDNNAAYKEVDITHYAAESEGPKA
>NZ_LR735440.1|WP_002437189.1|2472232_2472823_-|histidine-phosphatase-family-protein
MEIYLVRHGESQSNYDNKHGYLYFCGQLDVPLTERGIKSAKELSVYFKNKYIDNVYVSDLKRTRQTYEELFPYDIPTIYTKTLRERSLGVFEGKNKEEVCKDKRFEKYFRDPNYKYFRHSFSQKAPQGESYQHVYDRVVTFIENELNQQQRRVVIVAHQVVIRCFFVYFKMITKEEALATEIHNCYPYLIKKEMKF
>NZ_LR735440.1|WP_002437191.1|2472843_2473476_-|LysE-family-translocator
MDGLITFIIITLLIIIVPGPDFIIVMKNTINSSKMNGFMAAFGITTGHILYSSLAIFGIIYILTSLHFVFLTIKILGACYLIYLGIKSILSAHSSVDFSKQTLADVRNVSYITSFRQGFLSTSLNPKALLFYVSIFPQFLSNGNIHMKSEVALFAFSVVVVICLWFLFCVFIFQYIKLLFSRPRFKAIFDYIVGFVLIGLSINLLLSKSS
>NZ_LR735440.1|WP_001832461.1|2473949_2474204_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MFGLIGMIIVGGIIGWIAGLILGKDVPGGILGNIIAGIVGSWVGTMILGEWGPQLGKIHIFPALLGSIILIFIISLILKALRKK
>NZ_LR735440.1|WP_002437194.1|2474425_2474686_+|hypothetical-protein
MQHKNKFQRINQIIQIIGFLSFLAILTIITLNFFIKGHLQGHFEIGFNIQSNQVYVVTTLIIVTIICTILSAILNMLSNKKQNYKH
>NZ_LR735440.1|WP_001831354.1|2475154_2475397_-|30S-ribosomal-protein-S18
MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMALLPYVKEEQ
>NZ_LR735440.1|WP_001831333.1|2475441_2475951_-|single-stranded-DNA-binding-protein
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSRSYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNNFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPIDISDDDLPF
>NZ_LR735440.1|WP_001831345.1|2475973_2476270_-|30S-ribosomal-protein-S6
MRTYEIMYIVRPNIEEDAKKALVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFYNIVRIKTDNNKSTDEFQRLAKINDDIIRYIVIREDQDK
>NZ_LR735440.1|WP_002437208.1|2476654_2477464_+|lysozyme
MLKKFSYSIISLSIFATSLNFIDTQAQASSSSVSEKGTMGYGYQQYLKDHPKKQPHKTQNRSTFSAESNITETNNGERVLDISEWQGLLTNEQIKQLKKNYDFIILRAQYGSEYVDKTFEKNAELLEQNKMKYGVYSYSMYESPKDARYEANTLSQRAPKAAFYINDYEEQTVKSGDDETATQAWANEMRKLAGNKKILFYSYENFMLNHASNAVSSYDGYWLAAYQAEEPNREKVLWQYTNSYYSPELNQNVDANYIDENVNSSWFTS
>NZ_LR735440.1|WP_001831355.1|2477537_2477729_+|hypothetical-protein
MRLNLDWNKDFQEFQDILNSGIHPEWLYCAKANLVLEPAYTGEGKQFFSTQDIIKASKIIPFF
>NZ_LR735440.1|WP_001831336.1|2477961_2479059_-|redox-regulated-ATPase-YchF
MALTAGIVGLPNVGKSTLFNAITKAGALAANYPFATIDPNVGIVEVPDSRLIKLEEMVQPKKTIPTTFEFTDIAGIVKGASKGEGLGNKFLSHIREVDAICQVVRAFDDENVTHVSGRVNPLDDIEVINMELVLADLESVEKRLPKIEKMARQKDKTAEMELRILTQIKEALEDGKPVRSIDFNEDDQKWVNQAQLLTSKKMLYIANVGEDEIGDKDNDKVKAIREYAANEDSEVIVISAKIEEEIATLDDEDKEMFLEDLGIEEPGLDRLIRTTYDLLGLSTYFTAGVQEVRAWTFKQGMTAPQCAGIIHTDFERGFIRAEVTSYEDYVQHGGENGAKEAGRQRLEGKDYIMQDGDIVHFRFNV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_LR735440.1	1006514-1006540	2	0.926
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_LR735440.1	1239232-1239258	2	0.926
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_LR735440.1	2191510-2191536	2	0.926
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_LR735440.1	2411622-2411648	2	0.926

1. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to position: 1006514-1006540, mismatch: 2, identity: 0.926

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ccaacttgctttgtctgttgaatttct	Protospacer
*************..************

2. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to position: 1239232-1239258, mismatch: 2, identity: 0.926

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ccaacttgctctgcctgttgaatttct	Protospacer
**********.***.************

3. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to position: 2191510-2191536, mismatch: 2, identity: 0.926

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ccaacctgctttgcctgttgaatttct	Protospacer
*****.********.************

4. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to position: 2411622-2411648, mismatch: 2, identity: 0.926

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ccaacttgctttgtctgttgaatttct	Protospacer
*************..************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	MN694027	Marine virus AFVG_250M455, complete genome	27746-27772	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	MN694088	Marine virus AFVG_250M454, complete genome	24349-24375	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	MN694007	Marine virus AFVG_250M456, complete genome	24394-24420	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	337057-337083	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	80159-80185	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NC_020394	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence	137021-137047	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	280870-280896	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	622506-622532	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	75068-75094	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	414799-414825	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	454459-454485	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	88318-88344	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	382031-382057	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	247116-247142	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	459206-459232	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	513161-513187	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	310868-310894	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	374432-374458	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	5344-5370	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	330728-330754	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	377266-377292	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	497400-497426	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	258660-258686	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	236021-236047	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	500605-500631	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	543659-543685	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP050184	Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence	314628-314654	5	0.815
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	124810-124836	5	0.815
NZ_LR735440_2	2.1\|2041878\|30\|NZ_LR735440\|CRISPRCasFinder	2041878-2041907	30	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1051845-1051874	6	0.8
NZ_LR735440_3	3.1\|2471937\|27\|NZ_LR735440\|CRISPRCasFinder	2471937-2471963	27	MN693811	Marine virus AFVG_250M463, complete genome	40836-40862	6	0.778

1. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to MN694027 (Marine virus AFVG_250M455, complete genome) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ctaagttgctttgcttgttgaattaaa	Protospacer
*.** *******************

2. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to MN694088 (Marine virus AFVG_250M454, complete genome) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ctaagttgctttgcttgttgaattaaa	Protospacer
*.** *******************

3. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to MN694007 (Marine virus AFVG_250M456, complete genome) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
ctaagttgctttgcttgttgaattaaa	Protospacer
*.** *******************

4. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP034911 (Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cttgcttgctttgccttttgaatttct	Protospacer
*. .**********.* **********

5. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

6. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NC_020394 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

7. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

8. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

9. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

10. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

11. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

12. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

13. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

14. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

15. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

16. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

17. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

18. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

19. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

20. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

21. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

22. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

23. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

24. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

25. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cgctcttgttttgcttgttgtatttct	Protospacer
*   ****.*********** ******

26. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

27. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

28. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 5, identity: 0.815

ccaacttgctttgcttgttgaatttct	CRISPR spacer
cggtcttgttttgcttgttgtatttct	Protospacer
* . ****.*********** ******

29. spacer 2.1|2041878|30|NZ_LR735440|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

cttgagctttgctcaggcgttcctcttttt	CRISPR spacer
tttgctttttgctcaggcgttcctgttgtt	Protospacer
.***  .***************** ** **

30. spacer 3.1|2471937|27|NZ_LR735440|CRISPRCasFinder matches to MN693811 (Marine virus AFVG_250M463, complete genome) position: , mismatch: 6, identity: 0.778

ccaacttgctttgcttgttgaatttct	CRISPR spacer
tgattctgctttgcttgttgaatatct	Protospacer
. * ..***************** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1065409 : 1093807

Staphylococcus_phage(92.31%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829852.1\|1065409_1065631_-	hypothetical protein	A0A1W6JQ94	Staphylococcus_phage	3.2e-18	70.3
WP_001829835.1\|1065599_1065851_-	hypothetical protein	NA	NA	NA	NA
WP_001829853.1\|1066508_1067933_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.9e-172	63.9
WP_001829851.1\|1067922_1068924_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	6.9e-92	50.2
WP_002457867.1\|1068920_1069169_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.5e-36	83.1
WP_001829813.1\|1069239_1069707_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	2.5e-44	58.1
WP_002440269.1\|1069693_1070479_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	4.6e-99	70.9
WP_001832979.1\|1070709_1072302_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	2.7e-268	83.2
WP_001829830.1\|1072671_1073871_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.1e-192	85.4
WP_001829840.1\|1073973_1074882_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.5e-101	80.2
WP_001829832.1\|1075061_1075898_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.0e-120	73.3
WP_162154154.1\|1076200_1076338_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	4.0e-11	76.7
WP_155978831.1\|1076567_1077746_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.1e-59	36.7
WP_001830729.1\|1078224_1078578_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	8.5e-05	32.5
WP_001830726.1\|1078574_1078940_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.1e-34	57.0
WP_002493962.1\|1078978_1079287_-	hypothetical protein	NA	NA	NA	NA
WP_001830731.1\|1079563_1080277_+	transaldolase	M1PR54	Cyanophage	4.1e-22	37.4
WP_001830728.1\|1080416_1080860_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	3.1e-20	42.9
WP_001830734.1\|1080846_1081290_-	competence protein ComK	NA	NA	NA	NA
WP_001830724.1\|1081295_1081775_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	2.7e-25	42.3
WP_001830737.1\|1081982_1082198_+	hypothetical protein	NA	NA	NA	NA
WP_001830727.1\|1082575_1083427_+	glucosaminidase domain-containing protein	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
WP_001830730.1\|1083774_1085259_+	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
WP_002440254.1\|1085695_1086739_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.4e-134	66.5
WP_001830723.1\|1086745_1087378_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.5e-87	77.1
WP_002440250.1\|1087390_1088572_+	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.8e-176	75.3
WP_001830736.1\|1088584_1089046_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-59	84.2
WP_002440246.1\|1089093_1090095_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.0e-131	70.0
WP_001830886.1\|1090338_1091166_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001830809.1\|1091655_1092057_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001830894.1\|1092293_1092857_-	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	1.9e-67	66.5
WP_001830802.1\|1092853_1093807_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-67	84.7

DBSCAN-SWA_2

1819933 : 1828403

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831672.1\|1819933_1820500_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.0
WP_001831685.1\|1820499_1821531_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.1e-64	43.4
WP_001831721.1\|1821523_1823008_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-45	31.9
WP_001831715.1\|1822986_1825176_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.7e-140	40.4
WP_001831727.1\|1825168_1825840_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_001831728.1\|1825841_1826102_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001831723.1\|1826101_1826806_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	1.6e-47	42.5
WP_001831674.1\|1826806_1827934_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001831735.1\|1827920_1828403_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	43.3

DBSCAN-SWA_3

1834766 : 1910252

100

Staphylococcus_phage(38.55%)

holin,terminase,portal,tail,transposase,head,plate,integrase,capsid

attL 1830246:1830262|attR 1913344:1913360

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1830246:1830262	attL	NA	NA	NA	NA
WP_155978835.1\|1834766_1836443_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.2e-242	77.2
WP_001831704.1\|1836788_1837697_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_002439305.1\|1837853_1839056_-	serine hydrolase	G8IDB2	Mycobacterium_phage	1.4e-06	22.8
WP_001833067.1\|1839862_1841101_+	LCP family protein	NA	NA	NA	NA
WP_001831729.1\|1841148_1841619_+	DUF2538 family protein	NA	NA	NA	NA
WP_001831666.1\|1842192_1842615_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001831665.1\|1842855_1846863_+	bifunctional autolysin	A0A1J0MFI1	Staphylococcus_phage	2.6e-57	49.2
WP_001831691.1\|1847102_1847522_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001833065.1\|1847675_1848683_+	acyltransferase family protein	NA	NA	NA	NA
WP_002439292.1\|1848825_1850010_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_002439291.1\|1850354_1851173_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_002439289.1\|1851165_1851969_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_002439287.1\|1851955_1853629_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_002439285.1\|1853615_1854977_-	isochorismate synthase	NA	NA	NA	NA
WP_001831680.1\|1855155_1856094_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_002439280.1\|1856563_1857121_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001831694.1\|1857351_1857567_+	NINE protein	A0A060AN66	Enterococcus_phage	1.6e-06	40.4
WP_002439277.1\|1858108_1858639_+	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	1.5e-53	59.9
WP_002456096.1\|1858874_1859072_+	hypothetical protein	NA	NA	NA	NA
WP_002456098.1\|1860072_1860396_+	hypothetical protein	A0A0D4DCU8	Staphylococcus_phage	7.2e-51	92.5
WP_002439267.1\|1860742_1861507_-	phage regulatory protein/antirepressor Ant	A0A2H4J098	uncultured_Caudovirales_phage	6.8e-116	82.0
WP_002439266.1\|1861556_1861763_+	hypothetical protein	A1BTY8	Staphylococcus_virus	5.6e-33	95.6
WP_002439265.1\|1861751_1861916_-	hypothetical protein	Q4ZDZ8	Staphylococcus_virus	3.6e-14	71.2
WP_002439263.1\|1861912_1862167_-	helix-turn-helix transcriptional regulator	A0A2H4J306	uncultured_Caudovirales_phage	2.7e-29	95.5
WP_002439260.1\|1862360_1862690_+	helix-turn-helix transcriptional regulator	A0A2H4J641	uncultured_Caudovirales_phage	2.5e-51	96.3
WP_002439258.1\|1862701_1863163_+	ImmA/IrrE family metallo-endopeptidase	A0A141VTQ3	Staphylococcus_phage	3.6e-80	94.8
WP_002439256.1\|1863178_1863697_+	hypothetical protein	NA	NA	NA	NA
WP_002439254.1\|1863698_1864142_+	hypothetical protein	A0A2H4J2Y4	uncultured_Caudovirales_phage	2.1e-21	94.3
WP_002439253.1\|1864214_1864409_+	hypothetical protein	A0A1W6JQ63	Staphylococcus_phage	2.1e-05	75.7
WP_002439252.1\|1864477_1864993_+	hypothetical protein	A0A0H3U494	Staphylococcus_phage	5.9e-39	48.0
WP_002439251.1\|1864994_1865330_+	hypothetical protein	Q9G043	Staphylococcus_virus	1.4e-09	86.8
WP_002439250.1\|1865385_1865982_+\|integrase	phage integrase SAM-like domain-containing protein	B7T092	Staphylococcus_virus	6.1e-88	79.3
WP_002439248.1\|1866882_1868607_-	N-acetylmuramoyl-L-alanine amidase	I6T7G5	Staphylococcus_virus	0.0e+00	100.0
WP_002439247.1\|1868619_1868907_-\|holin	phage holin	I6TFV2	Staphylococcus_virus	4.3e-47	100.0
WP_049387152.1\|1868968_1869115_-	XkdX family protein	A0A2H4J4H4	uncultured_Caudovirales_phage	2.0e-21	100.0
WP_002439245.1\|1869107_1869461_-	hypothetical protein	A0A141VTP5	Staphylococcus_phage	3.1e-63	100.0
WP_139723489.1\|1869472_1870456_-\|plate	BppU family phage baseplate upper protein	A0A141VTP4	Staphylococcus_phage	2.3e-177	95.1
WP_145364238.1\|1870510_1872412_-	CHAP domain-containing protein	A1BTX6	Staphylococcus_virus	0.0e+00	98.4
WP_001830303.1\|1872550_1872850_-	DUF2951 family protein	A0A1W6JPB3	Staphylococcus_phage	8.4e-46	100.0
WP_001830255.1\|1872886_1873027_-	XkdX family protein	A0A1W6JPA9	Staphylococcus_phage	1.4e-19	100.0
WP_151520732.1\|1873028_1873367_-	hypothetical protein	A0A1W6JPA4	Staphylococcus_phage	4.1e-57	98.2
WP_151520733.1\|1873371_1874904_-\|plate	BppU family phage baseplate upper protein	A0A1W6JPA1	Staphylococcus_phage	5.2e-248	95.3
WP_012095111.1\|1874903_1877570_-	right-handed parallel beta-helix repeat-containing protein	I6T7F4	Staphylococcus_virus	0.0e+00	99.7
WP_151520734.1\|1877584_1879441_-\|tail	phage tail protein	A1BU67	Staphylococcus_virus	0.0e+00	98.5
WP_151520735.1\|1879454_1880393_-\|tail	phage tail family protein	I6SAU4	Staphylococcus_virus	1.4e-176	98.4
WP_151520736.1\|1880408_1883513_-\|terminase	terminase	I6TJQ3	Staphylococcus_virus	2.5e-305	98.9
WP_001830305.1\|1883515_1883818_-	hypothetical protein	A0A1W6JP91	Staphylococcus_phage	2.0e-47	100.0
WP_001830298.1\|1883880_1884375_-	hypothetical protein	I6T7F0	Staphylococcus_virus	8.6e-88	99.4
WP_049371687.1\|1884436_1884976_-\|tail	tail protein	A0A141VTN2	Staphylococcus_phage	1.1e-96	98.9
WP_002504346.1\|1884962_1885400_-	DUF3168 domain-containing protein	I6SAT8	Staphylococcus_virus	2.3e-76	96.6
WP_002468967.1\|1885412_1885826_-	HK97 gp10 family phage protein	A0A1W6JP98	Staphylococcus_phage	5.7e-77	99.3
WP_002468961.1\|1885818_1886148_-\|head	phage head closure protein	A0A141VTM9	Staphylococcus_phage	9.6e-59	100.0
WP_002486352.1\|1886140_1886455_-\|head,tail	phage head-tail connector protein	I6T7E4	Staphylococcus_virus	1.3e-52	99.0
WP_002456895.1\|1886454_1886745_-	Rho termination factor N-terminal domain-containing protein	I6T7M8	Staphylococcus_virus	4.1e-45	100.0
WP_002468982.1\|1886761_1887592_-\|capsid	N4-gp56 family major capsid protein	I6TG23	Staphylococcus_virus	1.7e-149	99.6
WP_002439208.1\|1887609_1888206_-	phage scaffolding protein	A1BU55	Staphylococcus_virus	2.3e-63	94.9
WP_002468959.1\|1888319_1888526_-	hypothetical protein	A0A141VTM4	Staphylococcus_phage	1.8e-23	85.1
WP_064635296.1\|1888633_1889587_-\|head	phage head morphogenesis protein	A0A141VTM3	Staphylococcus_phage	1.3e-164	92.7
WP_002468966.1\|1889543_1890980_-\|portal	phage portal protein	A0A1W6JPB8	Staphylococcus_phage	3.1e-279	99.2
WP_151520737.1\|1890985_1892251_-\|terminase	PBSX family phage terminase large subunit	I6SAS6	Staphylococcus_virus	2.6e-245	99.5
WP_049372083.1\|1892234_1892669_-\|terminase	terminase small subunit	I6SB37	Staphylococcus_virus	2.5e-70	95.8
WP_002439197.1\|1893122_1893539_-	hypothetical protein	A0A1W6JP87	Staphylococcus_phage	9.2e-75	100.0
WP_001830276.1\|1893556_1893775_-	hypothetical protein	A0A1W6JP79	Staphylococcus_phage	1.0e-32	100.0
WP_002469471.1\|1893778_1893919_-	hypothetical protein	A0A141VTT7	Staphylococcus_phage	1.1e-16	100.0
WP_002469495.1\|1893906_1894305_-	hypothetical protein	A0A141VTT6	Staphylococcus_phage	6.5e-70	100.0
WP_002468977.1\|1894510_1894681_-	transcriptional activator RinB	A1BUB4	Staphylococcus_virus	2.1e-25	94.6
WP_154814141.1\|1894673_1894826_-	hypothetical protein	A0A2H4J644	uncultured_Caudovirales_phage	1.9e-17	96.0
WP_002504970.1\|1894838_1895042_-	DUF1381 domain-containing protein	H9A0T7	Staphylococcus_phage	5.2e-23	83.6
WP_151520745.1\|1895058_1895319_-	hypothetical protein	NA	NA	NA	NA
WP_049323334.1\|1895401_1895725_-	hypothetical protein	I6SB84	Staphylococcus_virus	1.2e-53	98.1
WP_002469472.1\|1895717_1895897_-	DUF1024 family protein	A0A141VTT1	Staphylococcus_phage	4.4e-26	96.6
WP_070653518.1\|1895926_1896160_-	hypothetical protein	A0A141VTT0	Staphylococcus_phage	3.1e-35	100.0
WP_173019973.1\|1896163_1896517_-	thermonuclease family protein	A0A2H4J7U2	uncultured_Caudovirales_phage	3.9e-58	93.2
WP_049391358.1\|1896504_1896690_-	hypothetical protein	A0A2H4J8S5	uncultured_Caudovirales_phage	2.8e-23	86.7
WP_151520738.1\|1896676_1897291_-	HNH endonuclease	I6T7L3	Staphylococcus_virus	1.9e-113	97.1
WP_049371709.1\|1897296_1897527_-	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	1.4e-32	98.7
WP_151520739.1\|1897531_1897975_-	DUF3310 domain-containing protein	A0A2H4JCG6	uncultured_Caudovirales_phage	3.6e-77	97.9
WP_151520740.1\|1897971_1898331_-	hypothetical protein	A0A2H4J5X6	uncultured_Caudovirales_phage	4.5e-62	99.2
WP_032603691.1\|1898331_1898523_-	hypothetical protein	A0A2H4JBZ6	uncultured_Caudovirales_phage	5.6e-27	100.0
WP_032603692.1\|1898522_1898897_-	hypothetical protein	H9A0S5	Staphylococcus_phage	1.8e-53	79.0
WP_061827612.1\|1898883_1899300_-	DUF1064 domain-containing protein	A1BU01	Staphylococcus_virus	9.5e-72	95.6
WP_002456877.1\|1899309_1899555_-	hypothetical protein	I6TK11	Staphylococcus_virus	1.1e-40	100.0
WP_002504190.1\|1899532_1899754_-	hypothetical protein	A0A2H4J7L3	uncultured_Caudovirales_phage	6.0e-33	91.8
WP_155978836.1\|1899750_1900998_-	AAA family ATPase	A0A2H4JB43	uncultured_Caudovirales_phage	6.7e-230	99.0
WP_070867028.1\|1900987_1901341_-	hypothetical protein	I6SN23	Staphylococcus_virus	2.0e-54	92.3
WP_155978837.1\|1901346_1902090_-	DnaD domain protein	A0A1J0MF60	Staphylococcus_phage	1.9e-75	61.3
WP_155978838.1\|1902082_1902853_-	AP2 domain-containing protein	A0A1W6JP61	Staphylococcus_phage	3.9e-119	82.4
WP_002504791.1\|1902858_1903089_-	helix-turn-helix transcriptional regulator	A0A2H4J4G1	uncultured_Caudovirales_phage	6.1e-36	98.7
WP_155978839.1\|1903066_1903756_-	hypothetical protein	A0A2H4J4H1	uncultured_Caudovirales_phage	1.8e-131	98.7
WP_064582252.1\|1903769_1904183_-	single-stranded DNA-binding protein	A0A141VTR6	Staphylococcus_phage	6.8e-70	97.8
WP_155978840.1\|1904179_1904854_-	ERF family protein	A0A2H4IYS6	uncultured_Caudovirales_phage	6.4e-118	98.6
WP_064582248.1\|1904846_1905074_-	DUF2483 family protein	H9A0Y6	Staphylococcus_phage	1.2e-31	93.3
WP_155978841.1\|1905045_1905321_-	chordopoxvirus fusion protein	I6SMR9	Staphylococcus_virus	7.1e-07	94.5
WP_001830281.1\|1905617_1905827_-	hypothetical protein	A0A2H4J7I0	uncultured_Caudovirales_phage	9.7e-33	100.0
WP_064582244.1\|1905839_1906580_-	ORF6C domain-containing protein	A0A2H4J436	uncultured_Caudovirales_phage	3.1e-134	98.0
WP_064582242.1\|1906629_1906926_+	hypothetical protein	NA	NA	NA	NA
WP_155978842.1\|1907075_1907336_-	helix-turn-helix domain-containing protein	B7T095	Staphylococcus_virus	2.9e-34	85.4
WP_155978843.1\|1907528_1908167_+	LexA family transcriptional regulator	U3PBN8	Staphylococcus_phage	1.2e-100	83.5
WP_155978844.1\|1908220_1909144_+	DUF5067 domain-containing protein	H9A0X8	Staphylococcus_phage	3.3e-88	88.8
WP_155978845.1\|1909202_1910252_+\|integrase	tyrosine-type recombinase/integrase	I6SMN0	Staphylococcus_virus	2.0e-198	99.7
1913344:1913360	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2117162 : 2127596

uncultured_Caudovirales_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001829596.1\|2117162_2117942_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6
WP_002438903.1\|2117938_2118898_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	4.1e-17	100.0
WP_002438902.1\|2118881_2119856_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.9e-165	99.7
WP_002438901.1\|2119871_2120135_-	hypothetical protein	A0A2H4IYB4	uncultured_Caudovirales_phage	1.4e-15	98.4
WP_001829597.1\|2120109_2121078_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.9e-185	100.0
WP_001829582.1\|2121196_2123302_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	100.0
WP_001829589.1\|2123264_2123663_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
WP_001829684.1\|2124417_2125293_+	DMT family transporter	NA	NA	NA	NA
WP_001832596.1\|2125306_2125807_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
WP_002438897.1\|2126090_2127596_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	34.0

DBSCAN-SWA_5

2147459 : 2157995

Staphylococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001830323.1\|2147459_2148611_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	7.5e-26	39.6
WP_001830349.1\|2148600_2149188_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001830328.1\|2149484_2150156_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	4.1e-64	55.7
WP_001830341.1\|2150160_2150580_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_001830330.1\|2150580_2151294_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.6e-55	44.8
WP_001830331.1\|2151396_2151996_+	hypothetical protein	NA	NA	NA	NA
WP_162152262.1\|2152363_2152501_+	hypothetical protein	A0A146ICT8	Staphylococcus_phage	1.1e-11	79.1
WP_001830329.1\|2153096_2153534_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001830332.1\|2153584_2154058_+	DoxX family protein	NA	NA	NA	NA
WP_001830352.1\|2154032_2154722_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-34	35.2
WP_025987135.1\|2154724_2155777_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.0e-17	30.6
WP_001830351.1\|2155846_2156953_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	6.3e-62	43.2
WP_001830355.1\|2157155_2157995_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-60	43.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_LR735441

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5456 : 14333

Staphylococcus_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053040564.1\|5456_5804_+	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	1.9e-12	35.8
WP_155978858.1\|5970_6066_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_053022574.1\|6238_7018_+	hypothetical protein	NA	NA	NA	NA
WP_000583537.1\|7116_7725_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	8.3e-16	30.6
WP_010775116.1\|7976_8651_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.4e-127	98.7
WP_000393259.1\|9295_9688_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
WP_001028144.1\|9688_11128_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
WP_010775116.1\|11294_11969_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.4e-127	98.7
WP_001832666.1\|12044_12611_-	multidrug-binding transcriptional regulator QacR	NA	NA	NA	NA
WP_000622776.1\|12788_14333_+	quaternary ammonium compound efflux MFS transporter QacA	A0A0M3UL24	Mycobacterium_phage	4.2e-32	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR735440

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_LR735441

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection