CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR782233	Escherichia coli isolate SC468 chromosome omosome1	8 crisprs	DEDDh,DinG,cas3,csa3,PD-DExK	0	17	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR782233_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_1

335278-335391

Orphan

Consensus_repeat	Method
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_1

>merge|NZ_LR782233|1|335278-335391|CRISPRCasFinder
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAACCGCATCGTAGGCTGGGTAGGGCGTTCATGCCGCATCTGGGCATCCAGTGCCGGATGCGCTTCGCTTATCCGGCCTACAAA

>NZ_LR782233|1|1|335278-335391|CRISPRCasFinder
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA	CCGCATCGTAGGCTGGGTAGGGCGTTCATGCCGCATCTGGGCATCCAG
TGCCGGATGCGCTTCGCTTATCCGGCCTACAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_175058365.1\|325077_325992_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_LR782233.1\|WP_001075170.1\|335442_337728_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_LR782233.1\|WP_096858184.1\|324566_325037_+\|aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_LR782233.1\|WP_001281253.1\|342946_345574_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_LR782233.1\|WP_000948732.1\|330521_331880_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_LR782233.1\|WP_000332036.1\|334122_335253_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_LR782233.1\|WP_001297934.1\|347407_348031_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_LR782233.1\|WP_001000377.1\|326184_327375_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_LR782233.1\|WP_175058746.1\|348179_352574_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_LR782233.1\|WP_001225879.1\|354228_355005_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_LR782233.1\|WP_001061917.1\|358331_358982_-\|transcriptional-regulator-RcsB	unknown	unknown	gnl\|CDD\|182771
NZ_LR782233.1\|WP_000301031.1\|333164_333815_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_LR782233.1\|WP_000876055.1\|355282_358132_+\|two-component-system-sensor-histidine-kinase-RcsC	unknown	unknown	gnl\|CDD\|182772
NZ_LR782233.1\|WP_175058364.1\|323309_324512_+\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	unknown	unknown	gnl\|CDD\|179629
NZ_LR782233.1\|WP_001209935.1\|327371_328631_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_LR782233.1\|WP_175058366.1\|345722_347411_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_LR782233.1\|WP_000135040.1\|333868_334123_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_LR782233.1\|WP_175058367.1\|352574_354224_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_LR782233.1\|WP_000857268.1\|328620_330249_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_LR782233.1\|WP_000990783.1\|342077_342800_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_175058365.1\|325077_325992_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_LR782233.1\|WP_001075170.1\|335442_337728_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_LR782233.1\|WP_096858184.1\|324566_325037_+\|aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	5.71439e-109
NZ_LR782233.1\|WP_001281253.1\|342946_345574_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_LR782233.1\|WP_000948732.1\|330521_331880_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_LR782233.1\|WP_000332036.1\|334122_335253_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_LR782233.1\|WP_001297934.1\|347407_348031_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
NZ_LR782233.1\|WP_001000377.1\|326184_327375_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_LR782233.1\|WP_175058746.1\|348179_352574_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_LR782233.1\|WP_001225879.1\|354228_355005_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	1.05627e-152
NZ_LR782233.1\|WP_001061917.1\|358331_358982_-\|transcriptional-regulator-RcsB	gnl\|CDD\|182771	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional.	2.27775e-154
NZ_LR782233.1\|WP_000301031.1\|333164_333815_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	3.42273e-158
NZ_LR782233.1\|WP_000876055.1\|355282_358132_+\|two-component-system-sensor-histidine-kinase-RcsC	gnl\|CDD\|182772	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC.	0
NZ_LR782233.1\|WP_175058364.1\|323309_324512_+\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	gnl\|CDD\|179629	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY.	0
NZ_LR782233.1\|WP_001209935.1\|327371_328631_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_LR782233.1\|WP_175058366.1\|345722_347411_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_LR782233.1\|WP_000135040.1\|333868_334123_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_LR782233.1\|WP_175058367.1\|352574_354224_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	1.05652e-123
NZ_LR782233.1\|WP_000857268.1\|328620_330249_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_LR782233.1\|WP_000990783.1\|342077_342800_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.45677e-171

>NZ_LR782233.1|WP_000332036.1|334122_335253_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_LR782233.1|WP_000135040.1|333868_334123_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_LR782233.1|WP_000301031.1|333164_333815_+|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_LR782233.1|WP_000948732.1|330521_331880_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_LR782233.1|WP_000857268.1|328620_330249_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTTANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGEIQTLHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_LR782233.1|WP_001209935.1|327371_328631_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLKVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWHWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHVAQQIAQRAGGQQ
>NZ_LR782233.1|WP_001000377.1|326184_327375_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_LR782233.1|WP_175058365.1|325077_325992_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGEASPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NZ_LR782233.1|WP_096858184.1|324566_325037_+|aldolase
MSNPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRVKGSY
>NZ_LR782233.1|WP_175058364.1|323309_324512_+|nicotinamide-mononucleotide-deamidase-related-protein-YfaY
MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHGRGRVMAPSNRKQAELPASAEFINNPVGTACGFAIQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQISRELQSRQFSLTLSEQFTGGLLALQLSRADAPLLACEVVPSQEETLAQTAHWITERRANHFAGLALAVSGLEDEHLNFALATPDGTFALRVHFSATRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV
>NZ_LR782233.1|WP_001075170.1|335442_337728_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_LR782233.1|WP_000990783.1|342077_342800_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHKEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_LR782233.1|WP_001281253.1|342946_345574_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_LR782233.1|WP_175058366.1|345722_347411_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDESASVDASFDFTQVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINSQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_LR782233.1|WP_001297934.1|347407_348031_+|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_LR782233.1|WP_175058746.1|348179_352574_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLLDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIVKPSRYVQNSQFSPLKKYPLVEQFRYPLWQATSVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLNPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGELVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTSDINDSMILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAGKQQGQLLEKALNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVCSYAPAQQSVAAGSEWTGMQVK
>NZ_LR782233.1|WP_175058367.1|352574_354224_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQMSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATALNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAFKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTYLQQNADRDGDCLSIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRVLQDEMGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_LR782233.1|WP_001225879.1|354228_355005_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_LR782233.1|WP_000876055.1|355282_358132_+|two-component-system-sensor-histidine-kinase-RcsC
MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQTDVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVNKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES
>NZ_LR782233.1|WP_001061917.1|358331_358982_-|transcriptional-regulator-RcsB
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD

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Crispr_ID: NZ_LR782233_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_2

926368-926491

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_2

>merge|NZ_LR782233|2|926368-926491|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_LR782233|2|2|926368-926491|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_001764548.1\|935642_936812_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_LR782233.1\|WP_001538798.1\|924196_925801_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_LR782233.1\|WP_000269493.1\|933134_934067_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_LR782233.1\|WP_175058433.1\|929690_930332_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_LR782233.1\|WP_001273547.1\|919101_921204_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_LR782233.1\|WP_000098896.1\|930371_931520_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_LR782233.1\|WP_000102278.1\|935387_935477_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_LR782233.1\|WP_001362847.1\|921918_922587_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|274451
NZ_LR782233.1\|WP_175058431.1\|926805_928062_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_LR782233.1\|WP_175058430.1\|925926_926232_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_LR782233.1\|WP_001374511.1\|921216_921855_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_LR782233.1\|WP_001295403.1\|915820_917233_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_LR782233.1\|WP_000528342.1\|917789_917999_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_LR782233.1\|WP_001070247.1\|918454_919081_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_LR782233.1\|WP_001182336.1\|931810_933022_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_LR782233.1\|WP_000587583.1\|923372_924185_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_LR782233.1\|WP_175058432.1\|928102_929476_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_LR782233.1\|WP_000007283.1\|936957_937539_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_LR782233.1\|WP_001538799.1\|922583_923369_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_LR782233.1\|WP_000190985.1\|934063_935089_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_001764548.1\|935642_936812_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	6.28186e-97
NZ_LR782233.1\|WP_001538798.1\|924196_925801_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_LR782233.1\|WP_000269493.1\|933134_934067_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_LR782233.1\|WP_175058433.1\|929690_930332_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	6.0592e-123
NZ_LR782233.1\|WP_001273547.1\|919101_921204_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_LR782233.1\|WP_000098896.1\|930371_931520_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_LR782233.1\|WP_001362847.1\|921918_922587_+\|4Fe-4S-binding-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	3.15117e-75
NZ_LR782233.1\|WP_175058431.1\|926805_928062_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_LR782233.1\|WP_175058430.1\|925926_926232_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.55281e-64
NZ_LR782233.1\|WP_001374511.1\|921216_921855_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.00821e-121
NZ_LR782233.1\|WP_001295403.1\|915820_917233_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_LR782233.1\|WP_000528342.1\|917789_917999_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_LR782233.1\|WP_001070247.1\|918454_919081_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	1.7427e-139
NZ_LR782233.1\|WP_001182336.1\|931810_933022_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_LR782233.1\|WP_000587583.1\|923372_924185_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	4.35788e-173
NZ_LR782233.1\|WP_175058432.1\|928102_929476_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_LR782233.1\|WP_000007283.1\|936957_937539_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_LR782233.1\|WP_001538799.1\|922583_923369_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	8.13514e-161
NZ_LR782233.1\|WP_000190985.1\|934063_935089_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0

>NZ_LR782233.1|WP_175058430.1|925926_926232_-|monooxygenase
MATLLQLHFSFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFSDEKSALTYLEKHTARLKNLGVEEVVAKVFDVNVPLSQINQAKLA
>NZ_LR782233.1|WP_001538798.1|924196_925801_-|FAD-NAD(P)-binding-protein
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNLDLPSETFDLVVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_LR782233.1|WP_000587583.1|923372_924185_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERLFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGARARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANCGDNVHIIASGENSTVVSTGVVDSIILGPGGCAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_LR782233.1|WP_001538799.1|922583_923369_+|thiosulfate-reductase-cytochrome-B-subunit
MNLSQHAEQFQSQLANYVPLFTPQFWPVWLIIAGLLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_LR782233.1|WP_001362847.1|921918_922587_+|4Fe-4S-binding-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_LR782233.1|WP_001374511.1|921216_921855_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGDYADIACLTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_LR782233.1|WP_001273547.1|919101_921204_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVTAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFIYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEDMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_LR782233.1|WP_001070247.1|918454_919081_+|ferredoxin-like-protein
MNPVDRPLLNIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_LR782233.1|WP_000528342.1|917789_917999_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_LR782233.1|WP_001295403.1|915820_917233_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_LR782233.1|WP_175058431.1|926805_928062_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKAGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEACNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNAGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITDAATQVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNSLKLQPDQDGIGATLQPA
>NZ_LR782233.1|WP_175058432.1|928102_929476_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLSSAIILQRASR
>NZ_LR782233.1|WP_175058433.1|929690_930332_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFHTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTQA
>NZ_LR782233.1|WP_000098896.1|930371_931520_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_LR782233.1|WP_001182336.1|931810_933022_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLFIGLTIFALGSLGMLWVENAATLLILRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_LR782233.1|WP_000269493.1|933134_934067_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_LR782233.1|WP_000190985.1|934063_935089_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_LR782233.1|WP_000102278.1|935387_935477_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_LR782233.1|WP_001764548.1|935642_936812_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMSIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAMSMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPEAVCVANS
>NZ_LR782233.1|WP_000007283.1|936957_937539_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_LR782233_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_3

1523063-1523154

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_3

>merge|NZ_LR782233|3|1523063-1523154|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_LR782233|3|3|1523063-1523154|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_001028095.1\|1521105_1521600_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_LR782233.1\|WP_000420625.1\|1527345_1528266_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_LR782233.1\|WP_001298353.1\|1519694_1520495_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_LR782233.1\|WP_001001173.1\|1520504_1521095_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_LR782233.1\|WP_001230247.1\|1531790_1532963_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_LR782233.1\|WP_001126780.1\|1519300_1519687_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_LR782233.1\|WP_175058493.1\|1534869_1537602_+\|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS	unknown	unknown	gnl\|CDD\|236914
NZ_LR782233.1\|WP_001143120.1\|1524194_1524422_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_LR782233.1\|WP_000979523.1\|1512313_1512523_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782233.1\|WP_000209906.1\|1528648_1529248_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_LR782233.1\|WP_175058492.1\|1524459_1525701_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_LR782233.1\|WP_001151437.1\|1523577_1524174_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_LR782233.1\|WP_001313729.1\|1517505_1518597_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_LR782233.1\|WP_001313728.1\|1518596_1519289_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_LR782233.1\|WP_001120112.1\|1533092_1533785_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_LR782233.1\|WP_001298362.1\|1521620_1522949_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_LR782233.1\|WP_175058491.1\|1512577_1516540_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_LR782233.1\|WP_000024569.1\|1528265_1528571_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_LR782233.1\|WP_001063138.1\|1529244_1531791_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_LR782233.1\|WP_001331941.1\|1516579_1517218_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_001028095.1\|1521105_1521600_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_LR782233.1\|WP_000420625.1\|1527345_1528266_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_LR782233.1\|WP_001298353.1\|1519694_1520495_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	5.02981e-139
NZ_LR782233.1\|WP_001001173.1\|1520504_1521095_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.79055e-130
NZ_LR782233.1\|WP_001126780.1\|1519300_1519687_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_LR782233.1\|WP_175058493.1\|1534869_1537602_+\|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS	gnl\|CDD\|236914	PRK11466, PRK11466, hybrid sensory histidine kinase TorS; Provisional.	0
NZ_LR782233.1\|WP_001143120.1\|1524194_1524422_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_LR782233.1\|WP_001230247.1\|1531790_1532963_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_LR782233.1\|WP_000209906.1\|1528648_1529248_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	8.99384e-84
NZ_LR782233.1\|WP_175058492.1\|1524459_1525701_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_LR782233.1\|WP_001151437.1\|1523577_1524174_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_LR782233.1\|WP_001313729.1\|1517505_1518597_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_LR782233.1\|WP_001313728.1\|1518596_1519289_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	3.74324e-168
NZ_LR782233.1\|WP_001120112.1\|1533092_1533785_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	5.89892e-138
NZ_LR782233.1\|WP_001298362.1\|1521620_1522949_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_LR782233.1\|WP_175058491.1\|1512577_1516540_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_LR782233.1\|WP_000024569.1\|1528265_1528571_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	7.6018e-65
NZ_LR782233.1\|WP_001063138.1\|1529244_1531791_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_LR782233.1\|WP_001331941.1\|1516579_1517218_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	3.39853e-153

>NZ_LR782233.1|WP_001298362.1|1521620_1522949_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKNVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNSVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_LR782233.1|WP_001028095.1|1521105_1521600_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_LR782233.1|WP_001001173.1|1520504_1521095_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_LR782233.1|WP_001298353.1|1519694_1520495_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVREQLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSRHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_LR782233.1|WP_001126780.1|1519300_1519687_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_LR782233.1|WP_001313728.1|1518596_1519289_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQTALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQGKLLAKGSWDYQLVDELMPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSSTSFARIA
>NZ_LR782233.1|WP_001313729.1|1517505_1518597_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMDDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_LR782233.1|WP_001331941.1|1516579_1517218_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGVTLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_LR782233.1|WP_175058491.1|1512577_1516540_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPVLPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPIAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRQVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPALIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_LR782233.1|WP_000979523.1|1512313_1512523_-|hypothetical-protein
MMLQLCATVLNVTCVASLKMNEMLINEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_LR782233.1|WP_001151437.1|1523577_1524174_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_LR782233.1|WP_001143120.1|1524194_1524422_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_LR782233.1|WP_175058492.1|1524459_1525701_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAVTVAGIVLLASNAQAQTVQEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYKLLEQIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDRVLNEAVK
>NZ_LR782233.1|WP_000420625.1|1527345_1528266_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGTKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_LR782233.1|WP_000024569.1|1528265_1528571_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPSEIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_LR782233.1|WP_000209906.1|1528648_1529248_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNGLENSIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDGLRQKTLTALRQWLPEFVARCHQYDRFGFYAALSQLLQVLVECDNQKG
>NZ_LR782233.1|WP_001063138.1|1529244_1531791_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFISPQDASARGIRHGDVVRVFNVRGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_LR782233.1|WP_001230247.1|1531790_1532963_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVATGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_LR782233.1|WP_001120112.1|1533092_1533785_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_LR782233.1|WP_175058493.1|1534869_1537602_+|TMAO-reductase-system-sensor-histidine-kinase/response-regulator-TorS
MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNAATSAGATQAGIYDLIEQHQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLWLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRTQVATTLTTVSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLLLLGLVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIGRLMDAFRSSVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATEIADDVPTALMGDPRRIRQVITNLLSNALRFTDEGHIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRIATAPVPKTVNQAVRLDGLRLLLIEDNPLTQRITVEMLNSSGAQVVAVGNAAQALETLQNSEPFAVALVDFDLPDIDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQVNNDQPLDVSQLNEDAHLMGAEKIHEWLILFKQHALPLLDEIDIARASQDNEKIKRAAHQLKSSCSSLGMRSASQQCAQLEQQPLSAPLPHEEITRSVAALEAWLIRKT

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Crispr_ID: NZ_LR782233_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_4

2185642-2185782

Orphan

Consensus_repeat	Method
ACGCTTATCAGGCCTACAGATTTCCGTGCCATTCGTAGGCCGGATAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_4

>merge|NZ_LR782233|4|2185642-2185782|CRISPRCasFinder
ACGCTTATCAGGCCTACAGATTTCCGTGCCATTCGTAGGCCGGATAAGGCGTTCACGTCGCATCCGGCTGTGGTGGCCAATGCCTGAAGCGCCACGCTTATCAGGCCTACAGATTTCCGCGCCATTCGTAGGCCGGATAAG

>NZ_LR782233|4|4|2185642-2185782|CRISPRCasFinder
ACGCTTATCAGGCCTACAGATTTCCGTGCCATTCGTAGGCCGGATAAG	GCGTTCACGTCGCATCCGGCTGTGGTGGCCAATGCCTGAAGCGCC
ACGCTTATCAGGCCTACAGATTTCCGCGCCATTCGTAGGCCGGATAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_032329779.1\|2171062_2171953_-\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
NZ_LR782233.1\|WP_097447921.1\|2185815_2187234_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_LR782233.1\|WP_001346321.1\|2196224_2196812_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_LR782233.1\|WP_175058555.1\|2174991_2175237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782233.1\|WP_097447924.1\|2174300_2174975_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|273358
NZ_LR782233.1\|WP_175058554.1\|2172191_2173778_+\|propionate-catabolism-operon-regulatory-protein-PrpR	unknown	unknown	gnl\|CDD\|237963
NZ_LR782233.1\|WP_052906394.1\|2192098_2193187_-\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	unknown	unknown	gnl\|CDD\|214491
NZ_LR782233.1\|WP_175058556.1\|2183236_2184619_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235873
NZ_LR782233.1\|WP_175058557.1\|2190535_2191033_+\|DUF1097-domain-containing-protein	unknown	unknown	gnl\|CDD\|368942
NZ_LR782233.1\|WP_001285909.1\|2169733_2170903_-\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_LR782233.1\|WP_000691951.1\|2173878_2174154_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|182151
NZ_LR782233.1\|WP_000692729.1\|2176700_2177750_-\|NADPH-dependent-aldehyde-reductase-YahK	unknown	unknown	gnl\|CDD\|176186
NZ_LR782233.1\|WP_024223509.1\|2188770_2189634_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_LR782233.1\|WP_097447920.1\|2196825_2198298_+\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_LR782233.1\|WP_096843090.1\|2187233_2188781_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_LR782233.1\|WP_175058755.1\|2181286_2182270_-\|autoinducer-2-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380657
NZ_LR782233.1\|WP_096843087.1\|2191124_2192057_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182237
NZ_LR782233.1\|WP_112886666.1\|2189673_2190279_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_LR782233.1\|WP_000131040.1\|2194062_2196096_-\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_LR782233.1\|WP_112886667.1\|2184628_2185579_-\|carbamate-kinase-family-protein	unknown	unknown	gnl\|CDD\|183464

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_032329779.1\|2171062_2171953_-\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
NZ_LR782233.1\|WP_097447921.1\|2185815_2187234_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8282e-115
NZ_LR782233.1\|WP_001346321.1\|2196224_2196812_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	6.99347e-111
NZ_LR782233.1\|WP_112886667.1\|2184628_2185579_-\|carbamate-kinase-family-protein	gnl\|CDD\|183464	PRK12352, PRK12352, putative carbamate kinase; Reviewed.	0
NZ_LR782233.1\|WP_097447924.1\|2174300_2174975_+\|LysE-family-transporter	gnl\|CDD\|273358	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein. [Transport and binding proteins, Amino acids, peptides and amines].	2.36913e-74
NZ_LR782233.1\|WP_175058554.1\|2172191_2173778_+\|propionate-catabolism-operon-regulatory-protein-PrpR	gnl\|CDD\|237963	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional.	0
NZ_LR782233.1\|WP_052906394.1\|2192098_2193187_-\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	5.78924e-102
NZ_LR782233.1\|WP_175058556.1\|2183236_2184619_-\|amidohydrolase-family-protein	gnl\|CDD\|235873	PRK06846, PRK06846, putative deaminase; Validated.	0
NZ_LR782233.1\|WP_112886666.1\|2189673_2190279_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	5.30171e-20
NZ_LR782233.1\|WP_175058557.1\|2190535_2191033_+\|DUF1097-domain-containing-protein	gnl\|CDD\|368942	pfam06496, DUF1097, Protein of unknown function (DUF1097). This family consists of several bacterial putative membrane proteins.	2.59774e-19
NZ_LR782233.1\|WP_001285909.1\|2169733_2170903_-\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_LR782233.1\|WP_000691951.1\|2173878_2174154_-\|DUF1471-domain-containing-protein	gnl\|CDD\|182151	PRK09929, PRK09929, hypothetical protein; Provisional.	5.05349e-43
NZ_LR782233.1\|WP_175058755.1\|2181286_2182270_-\|autoinducer-2-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380657	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein. Ligand-binding protein LsrB-like of a transport system, similar to periplasmic binding domain of autoinducer-2 (AI-2) receptor LsrB from Salmonella typhimurium and its close homologs from other bacteria. The members of this group are homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transporters of many sugar based solutes in bacteria and archaea and that are a member of the type 1 periplasmic binding protein superfamily. LsrB, which is part of the ABC transporter complex LsrABCD, binds a chemically distinct form of the AI-2 signal that lacks boron, in contrast to the Vibrio harveyi AI-2 signaling molecule that has an unusual furanosyl borate diester. Hence, many bacteria coordinate their gene expression according to the local density of their population by producing species specific AI-2. This process of quorum sensing allows LsrB to function as a periplasmic AI-2 binding protein in interspecies signaling.	2.09133e-165
NZ_LR782233.1\|WP_024223509.1\|2188770_2189634_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.18284e-35
NZ_LR782233.1\|WP_097447920.1\|2196825_2198298_+\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_LR782233.1\|WP_096843087.1\|2191124_2192057_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182237	PRK10094, PRK10094, HTH-type transcriptional activator AllS.	8.92391e-82
NZ_LR782233.1\|WP_000692729.1\|2176700_2177750_-\|NADPH-dependent-aldehyde-reductase-YahK	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_LR782233.1\|WP_000131040.1\|2194062_2196096_-\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_LR782233.1\|WP_096843090.1\|2187233_2188781_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	1.51029e-159

>NZ_LR782233.1|WP_112886667.1|2184628_2185579_-|carbamate-kinase-family-protein
MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFNESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIQFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGEMGTHIIKT
>NZ_LR782233.1|WP_175058556.1|2183236_2184619_-|amidohydrolase-family-protein
MKENNSRREFLSQSGKMVTAAALFGPSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDNDKGVDIHLHETTPAGVAAINYMVETVEKTLQLKGKLTISHAFALATLNEQQVDKLAHRMVAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>NZ_LR782233.1|WP_175058755.1|2181286_2182270_-|autoinducer-2-ABC-transporter-substrate-binding-protein
MNKRFVINMVSSLLLGAALISAPLRAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVNASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMQNLGKADVDMDKRIIRFHKVLLVNKDNIDSLY
>NZ_LR782233.1|WP_000692729.1|2176700_2177750_-|NADPH-dependent-aldehyde-reductase-YahK
MKIKAVGAYSAKQPLEPMDITRREPGPHDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWLAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSESKREAAKALGADEVVNSRNADEMVAHVKSFDFILNTVAAPHNLDDFTTLLKRDGTITLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD
>NZ_LR782233.1|WP_175058555.1|2174991_2175237_-|hypothetical-protein
MAVQLFKTFLNQIPLFSSLQSGTLPLFGCSGRVGPMKKAHTGESRLKWEAKDSSKLIGNKDHALRRLSSPMVGIRQIRLIT
>NZ_LR782233.1|WP_097447924.1|2174300_2174975_+|LysE-family-transporter
MMKLLHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCGEIFSLIRIVGGAYLLWFAWCSSMRRHSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLHAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
>NZ_LR782233.1|WP_000691951.1|2173878_2174154_-|DUF1471-domain-containing-protein
MKIISKMLVGALAFAVTNVYAAELMTKAEFEKVASQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
>NZ_LR782233.1|WP_175058554.1|2172191_2173778_+|propionate-catabolism-operon-regulatory-protein-PrpR
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGQFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKMSLAALSVPFSAALRQGLETCQIVLLLYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFLQLLLPELARESAKTPIQGLLTAQQALEKFNGDKTAAANYLGISRTTFWRRLKS
>NZ_LR782233.1|WP_032329779.1|2171062_2171953_-|methylisocitrate-lyase
MPLHSPGKAFRAALSKETPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAEAYVEAGAEMLFPEAITELTMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNILRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDDLFARGQVK
>NZ_LR782233.1|WP_001285909.1|2169733_2170903_-|2-methylcitrate-synthase
MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRQFVALDKRQ
>NZ_LR782233.1|WP_097447921.1|2185815_2187234_-|DUF1116-domain-containing-protein
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLNWTPPGQGNMQVVQALDNIADSPLADKIASANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPVTWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKILGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
>NZ_LR782233.1|WP_096843090.1|2187233_2188781_-|acyl-CoA-synthetase-FdrA
MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELGQAKNGDLMIVINGKSGVDNEQLLAEIEELFNTKAQSGSHEARYATIASAKKYIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETPVDEQGLQFARGSKEAALKAVMLSGVKQEHLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>NZ_LR782233.1|WP_024223509.1|2188770_2189634_-|DUF2877-domain-containing-protein
MWALTADADFLAQRGQGQVEQVFARAVNIVLPARQQLLTLLCEEYDNAPNSCRLALTHFNGLFRHGDKVQFDDQGITIGQHHHIEMSHCQRWLSPTLQMTALNFHLIAWQQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIAVAVASMMGLGIGLTPSADDYLTGLVLILFISGHPAEKYKEEFYLGLQRGRNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
>NZ_LR782233.1|WP_112886666.1|2189673_2190279_-|ankyrin-repeat-domain-containing-protein
MTIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGANINKQDLTCLNPFLMSCLNGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
>NZ_LR782233.1|WP_175058557.1|2190535_2191033_+|DUF1097-domain-containing-protein
MNGLTATGVTVGICAGLWQLVSSHVGRSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLAVNYSGMVWAFFAALAAGWLAPVSGLSAFWANVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKSDGY
>NZ_LR782233.1|WP_096843087.1|2191124_2192057_+|LysR-family-transcriptional-regulator
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVRKAMAQSLLITRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
>NZ_LR782233.1|WP_052906394.1|2192098_2193187_-|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIESDITFWRDIFFRYNPEIISATGNNSHKYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGMIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
>NZ_LR782233.1|WP_000131040.1|2194062_2196096_-|choline-BCCT-transporter-BetT
MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKNLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA
>NZ_LR782233.1|WP_001346321.1|2196224_2196812_+|transcriptional-regulator-BetI
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGTAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKPLDKPLAHSLTRHFITQHLPTD
>NZ_LR782233.1|WP_097447920.1|2196825_2198298_+|betaine-aldehyde-dehydrogenase
MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPTKCKAAFEQKVLARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGIEEGARVLCGGDVLKGDSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNLAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF

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Crispr_ID: NZ_LR782233_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_5

2547526-2547658

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_LR782233_5

>merge|NZ_LR782233|5|2547526-2547658|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTCCTCACCAATATTGAAAACATGGCGTAGAAAAAAGAAATTTTCAATATTGTTTTATGGATCACCAATATTGAAAG

>NZ_LR782233|5|1|2547526-2547658|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTC
CTCACCAATATTGAAAA	CATGGCGTAGAAAAAAGAAATTTTCAATATTGTTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_001298633.1\|2559071_2560220_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_LR782233.1\|WP_001682555.1\|2545708_2546650_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_LR782233.1\|WP_000349942.1\|2550723_2551941_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_LR782233.1\|WP_000004399.1\|2553676_2554462_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_LR782233.1\|WP_000377117.1\|2540204_2542067_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_LR782233.1\|WP_001166403.1\|2562643_2563594_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_LR782233.1\|WP_000787104.1\|2547907_2549422_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_LR782233.1\|WP_175058589.1\|2539333_2539513_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	unknown	unknown	gnl\|CDD\|227619
NZ_LR782233.1\|WP_024224816.1\|2555832_2559054_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_LR782233.1\|WP_000257181.1\|2537262_2538111_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	unknown	unknown	gnl\|CDD\|273208
NZ_LR782233.1\|WP_000543585.1\|2560675_2561497_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_LR782233.1\|WP_000333104.1\|2555176_2555572_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_LR782233.1\|WP_021530885.1\|2544371_2545658_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_LR782233.1\|WP_097447820.1\|2546664_2547435_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_LR782233.1\|WP_000624375.1\|2539533_2540013_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_LR782233.1\|WP_000122880.1\|2554467_2555058_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_LR782233.1\|WP_175058590.1\|2542697_2544029_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_LR782233.1\|WP_000600725.1\|2542059_2542590_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_LR782233.1\|WP_000203741.1\|2544087_2544375_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_LR782233.1\|WP_000347117.1\|2549452_2550595_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_001298633.1\|2559071_2560220_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_LR782233.1\|WP_001682555.1\|2545708_2546650_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_LR782233.1\|WP_000349942.1\|2550723_2551941_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_LR782233.1\|WP_000004399.1\|2553676_2554462_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	6.92249e-179
NZ_LR782233.1\|WP_000377117.1\|2540204_2542067_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_LR782233.1\|WP_001166403.1\|2562643_2563594_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_LR782233.1\|WP_000787104.1\|2547907_2549422_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_LR782233.1\|WP_175058589.1\|2539333_2539513_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	gnl\|CDD\|227619	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only].	7.69551e-08
NZ_LR782233.1\|WP_024224816.1\|2555832_2559054_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_LR782233.1\|WP_000257181.1\|2537262_2538111_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_LR782233.1\|WP_000543585.1\|2560675_2561497_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.6349e-141
NZ_LR782233.1\|WP_000333104.1\|2555176_2555572_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	5.69104e-74
NZ_LR782233.1\|WP_021530885.1\|2544371_2545658_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_LR782233.1\|WP_097447820.1\|2546664_2547435_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	1.66744e-169
NZ_LR782233.1\|WP_000624375.1\|2539533_2540013_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_LR782233.1\|WP_000122880.1\|2554467_2555058_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	1.14328e-142
NZ_LR782233.1\|WP_175058590.1\|2542697_2544029_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.64142e-59
NZ_LR782233.1\|WP_000600725.1\|2542059_2542590_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
NZ_LR782233.1\|WP_000203741.1\|2544087_2544375_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_LR782233.1\|WP_000347117.1\|2549452_2550595_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0

>NZ_LR782233.1|WP_097447820.1|2546664_2547435_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVLVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_LR782233.1|WP_001682555.1|2545708_2546650_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGTQAIQLGANHVWKLSGKPDERMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPALTAALAR
>NZ_LR782233.1|WP_021530885.1|2544371_2545658_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQSSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_LR782233.1|WP_000203741.1|2544087_2544375_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_LR782233.1|WP_175058590.1|2542697_2544029_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFEEEQSQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_LR782233.1|WP_000600725.1|2542059_2542590_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_LR782233.1|WP_000377117.1|2540204_2542067_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_LR782233.1|WP_000624375.1|2539533_2540013_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_LR782233.1|WP_175058589.1|2539333_2539513_-|type-II-toxin-antitoxin-system-CcdA-family-antitoxin
MNDKTFDFTSERDFVSRAHCVGLNLQATLQWNEVNEDAISALNQLADETGCFSDEYRKF
>NZ_LR782233.1|WP_000257181.1|2537262_2538111_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYNIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLSEGEAVAS
>NZ_LR782233.1|WP_000787104.1|2547907_2549422_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSVLVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_LR782233.1|WP_000347117.1|2549452_2550595_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_LR782233.1|WP_000349942.1|2550723_2551941_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMTKGKDPYYAGCGLYKCADGYIVMELVGITQIAECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_LR782233.1|WP_000004399.1|2553676_2554462_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_LR782233.1|WP_000122880.1|2554467_2555058_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAALHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_LR782233.1|WP_000333104.1|2555176_2555572_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGCVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_LR782233.1|WP_024224816.1|2555832_2559054_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEVVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_LR782233.1|WP_001298633.1|2559071_2560220_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGSWTLTGGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTIKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIALIEQYRKTAK
>NZ_LR782233.1|WP_000543585.1|2560675_2561497_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>NZ_LR782233.1|WP_001166403.1|2562643_2563594_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDATDIQEEWVKEAKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD

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Crispr_ID: NZ_LR782233_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_6

2692355-2692494

Orphan

Consensus_repeat	Method
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_6

>merge|NZ_LR782233|6|2692355-2692494|CRISPRCasFinder
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATGAGACGCGACAGCGTCGCATCAGGCAAGGCTGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA

>NZ_LR782233|6|5|2692355-2692494|CRISPRCasFinder
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA	GCACTGAACTCGTAGGCCTGATGAGACGCGACAGCGTCGCATCAGGCAAGGC
TGTTATTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_000397144.1\|2690826_2692338_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_LR782233.1\|WP_001519236.1\|2697884_2698301_-\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_LR782233.1\|WP_001224045.1\|2679332_2679482_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_LR782233.1\|WP_096983706.1\|2704163_2705099_+\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|273209
NZ_LR782233.1\|WP_000584114.1\|2689459_2690560_-\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_LR782233.1\|WP_175058606.1\|2693038_2695894_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_LR782233.1\|WP_001296693.1\|2704026_2704161_+\|pyr-operon-leader-peptide	unknown	unknown	gnl\|CDD\|285317
NZ_LR782233.1\|WP_175058608.1\|2698462_2699467_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_LR782233.1\|WP_000148581.1\|2705111_2705573_+\|aspartate-carbamoyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|272981
NZ_LR782233.1\|WP_175058607.1\|2697335_2697839_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR782233.1\|WP_000786399.1\|2692595_2693039_+\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_LR782233.1\|WP_001136728.1\|2679741_2680923_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197216
NZ_LR782233.1\|WP_001327357.1\|2677171_2677294_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225724
NZ_LR782233.1\|WP_001143135.1\|2680936_2683708_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|334588
NZ_LR782233.1\|WP_021522342.1\|2685565_2686585_+\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_LR782233.1\|WP_000991435.1\|2676183_2677164_+\|9-O-acetyl-N-acetylneuraminic-acid-deacetylase	unknown	unknown	gnl\|CDD\|377084
NZ_LR782233.1\|WP_175058609.1\|2702507_2703221_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_LR782233.1\|WP_001309158.1\|2699567_2699798_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782233.1\|WP_001295681.1\|2688377_2689460_-\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_LR782233.1\|WP_133142601.1\|2686714_2688217_+\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_000397144.1\|2690826_2692338_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_LR782233.1\|WP_001519236.1\|2697884_2698301_-\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	1.18245e-68
NZ_LR782233.1\|WP_001224045.1\|2679332_2679482_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.82878e-08
NZ_LR782233.1\|WP_096983706.1\|2704163_2705099_+\|aspartate-carbamoyltransferase	gnl\|CDD\|273209	TIGR00670, Aspartate_carbamoyltransferase, aspartate carbamoyltransferase. Aspartate transcarbamylase (ATCase) is an alternate name.PyrB encodes the catalytic chain of aspartate carbamoyltransferase, an enzyme of pyrimidine biosynthesis, which organizes into trimers. In some species, including E. coli and the Archaea but excluding Bacillus subtilis, a regulatory subunit PyrI is also present in an allosterically regulated hexameric holoenzyme. Several molecular weight classes of ATCase are described in MEDLINE:96303527 and often vary within taxa. PyrB and PyrI are fused in Thermotoga maritima.Ornithine carbamoyltransferases are in the same superfamily and form an outgroup. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	1.80826e-166
NZ_LR782233.1\|WP_000584114.1\|2689459_2690560_-\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_LR782233.1\|WP_175058606.1\|2693038_2695894_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_LR782233.1\|WP_001296693.1\|2704026_2704161_+\|pyr-operon-leader-peptide	gnl\|CDD\|285317	pfam08052, PyrBI_leader, PyrBI operon leader peptide. This family consists of the pyrBI operon leader peptides. The expression of the pyrBI operon, which encodes the subunits of the pyrimidine biosynthetic enzyme aspartate transcarbamylase. is regulated primarily through a UTP-sensitive transcriptional attenuation control mechanism. In this mechanism, the concentration of UTP determines the extent of coupling between transcription and translation within the pyrBI leader region, hence determining the level of rho-independent transcriptional termination at an attenuator preceding the pyrB gene.	7.18385e-22
NZ_LR782233.1\|WP_175058608.1\|2698462_2699467_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_LR782233.1\|WP_000148581.1\|2705111_2705573_+\|aspartate-carbamoyltransferase-regulatory-subunit	gnl\|CDD\|272981	TIGR00240, Aspartate_carbamoyltransferase_regulatory_chain, aspartate carbamoyltransferase, regulatory subunit. The presence of this regulatory subunit allows feedback inhibition by CTP on aspartate carbamoyltransferase, the first step in the synthesis of CTP from aspartate. In many species, this regulatory subunit is not present. In Thermotoga maritima, the catalytic and regulatory subunits are encoded by a fused gene and the regulatory region has enough sequence differences to score below the trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	7.35468e-86
NZ_LR782233.1\|WP_175058607.1\|2697335_2697839_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.03513e-19
NZ_LR782233.1\|WP_000786399.1\|2692595_2693039_+\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_LR782233.1\|WP_001136728.1\|2679741_2680923_+\|hypothetical-protein	gnl\|CDD\|197216	cd09117, PLDc_Bfil_DEXD_like, Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, and uncharacterized proteins with a DEAD domain. Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, uncharacterized type III restriction endonuclease Res subunit, and uncharacterized DNA/RNA helicase superfamily II members. Proteins in this family are found mainly in prokaryotes. They contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain, and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily. BfiI consists of two discrete domains with distinct functions: an N-terminal catalytic domain with non-specific nuclease activity and dimerization function that is more closely related to Nuc, an EDTA-resistant nuclease from the phospholipase D (PLD) superfamily; and a C-terminal domain that specifically recognizes its target sequences, 5'-ACTGGG-3'. BfiI forms a functionally active homodimer which has two DNA-binding surfaces located at the C-terminal domains but only one active site, located at the dimer interface between the two N-terminal catalytic domains that contain the two HKD motifs from both subunits. BfiI utilizes a single active site to cut both DNA strands, which represents a novel mechanism for the scission of double-stranded DNA. It uses a histidine residue from the HKD motif in one subunit as the nucleophile for the cleavage of the target phosphodiester bond in both of the anti-parallel DNA strands, while the symmetrically-related histidine residue from the HKD motif of the opposite subunit acts as the proton donor/acceptor during both strand-scission events.	2.43655e-20
NZ_LR782233.1\|WP_001327357.1\|2677171_2677294_-\|hypothetical-protein	gnl\|CDD\|225724	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms].	9.3909e-11
NZ_LR782233.1\|WP_001143135.1\|2680936_2683708_-\|restriction-endonuclease	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	3.86492e-11
NZ_LR782233.1\|WP_021522342.1\|2685565_2686585_+\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.46293e-169
NZ_LR782233.1\|WP_000991435.1\|2676183_2677164_+\|9-O-acetyl-N-acetylneuraminic-acid-deacetylase	gnl\|CDD\|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	1.0734e-16
NZ_LR782233.1\|WP_175058609.1\|2702507_2703221_+\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	1.11725e-147
NZ_LR782233.1\|WP_001295681.1\|2688377_2689460_-\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_LR782233.1\|WP_133142601.1\|2686714_2688217_+\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0

>NZ_LR782233.1|WP_000397144.1|2690826_2692338_+|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_LR782233.1|WP_000584114.1|2689459_2690560_-|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_LR782233.1|WP_001295681.1|2688377_2689460_-|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_LR782233.1|WP_133142601.1|2686714_2688217_+|DUF853-domain-containing-protein
MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAAEGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_LR782233.1|WP_021522342.1|2685565_2686585_+|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADL
>NZ_LR782233.1|WP_001143135.1|2680936_2683708_-|restriction-endonuclease
MPTQKAVNIANLTDMEVINNEPALHLRPVMEVAHELGAIDWSFTEVDTRLPGHDIHPYPAKFIPQLPHGLISRLSGRGETVLDPFGGSGTTALEAVKLGRKAISIDANPLSALIGRVKTARLEPETLKALNAHHSVLLTHLEGGHLSPSSLINNYSSHAPKIVNQEKWFADTAYAELCLIKAYINELDSTSQDIALVALSRIVIKASFQDSETRYKSVPREVPMGETLSRYLREFTAVIKSVEKNEAATRYGLSQFLCDDIRVISKEKLPDGIADLVVTSPPYGNATDYHLYHRFRLLWLGFDPIALGHVEIGSHLKHQRESSGFESYLADMEAALATMHRALKPGRYAALVIGDSVYDKKTYDPAEALYERADSLGFEACTIVDRAIHAVKRSFSHAGRRATSEHILVLRRKVAPTLIQISPAPYKLWPYEAELRLRELGLKLGDADPSLDIRVPSLEEDRSMYKRAAFSHSVQLEGGYVEPTWQAVLENGEAWRSTTRKDPKYVTHGIHSYKGKFYPQLAKSLLNISGFGPGATVLDLFCGSGTTLLEGYLNGFRTFGCDMNPLAAKISRAKLGVLELNPDTVREVVLSVQEFLASPPSNFPQNLDHVEESCREEILRWFSPTIAFKLNWVLGLLRRISAGVMLDFLEVILSSIIREVSNQEPTDLRIRYRSEPLTDADVLGLFLDKLEDQFNRIEKFWKIRSNAPQAFLPSVITEGDNRKPDTFMKLGLESGSVDLVLTSPPYGTALPYIDTDRLSLLFIMGLKSSERKPVENGLIGSREISTVERRRLEQIELREVLPSGSQHFISTMQRELASDLSAGFRKRNMPALMVRYLLDMSASLGQAKRLLRSGGEMMIVIGDNKTTINGKVMLIPCTDLIEEIACTQGMVIVERIDISVTTENFKHIKNAIVKNVVLRLRKP
>NZ_LR782233.1|WP_001136728.1|2679741_2680923_+|hypothetical-protein
MPQVSFITPLDQPSGSKRLLDILRTGLKDPRFTKLRIVTAYAKSGPLLRLKSDIESWAASGNSLCAILGIDQQGTSKEALTIAADLCKELYITRENGITFHPKIYLFDGPKHAKAIIGSNNLTVGGTETNFESSIILDLVLPEDDSIYKDLDTMWGNLLPHSCVATKAFDQQLLDELIANGAVLSELDKQARAKLTGNYPTAPRTGLIRKPASPLPTSIMKASKTQVAGIMGQPQSPQQVVTGLIIQIKPHHNGEIFLSKIAVLQNPSFFGWPFKGSTIPKKAGNPAYPQRTPDPVVNINVYGPATTPILTLSSYQLNTVYYSAKAEIRITASPLVSQVPDYSIMVMMPGNSAEIDYEICIYRPDSPQYTSWLSACNQSMPSGGKKARKFGWF
>NZ_LR782233.1|WP_001224045.1|2679332_2679482_-|transposase
MRKARFTEHQIIAVIKSVEAGRTVKDICWEAGISEDTYYIYGLPPFCKH
>NZ_LR782233.1|WP_001327357.1|2677171_2677294_-|hypothetical-protein
MISYVFLLPVCPNCHAMLHRRKPPFTPEELKALMDANKSN
>NZ_LR782233.1|WP_000991435.1|2676183_2677164_+|9-O-acetyl-N-acetylneuraminic-acid-deacetylase
MNAIISPDYYYVLTVAGQSNAMAYGEGLPLPDKEDAPHPRIKQLARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARKLLPFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRTRATLAKNPHNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLDNITDAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPDDLSTGYYGSAYRSPENWTTALRSSHFSAAARRGIISDRFVEAILQFWRER
>NZ_LR782233.1|WP_000786399.1|2692595_2693039_+|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_LR782233.1|WP_175058606.1|2693038_2695894_+|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQLFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_LR782233.1|WP_175058607.1|2697335_2697839_+|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTQQDNPAIASVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSEADICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NZ_LR782233.1|WP_001519236.1|2697884_2698301_-|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIDELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGIRH
>NZ_LR782233.1|WP_175058608.1|2698462_2699467_+|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNPQVKFLHCLPAFHDDQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLSK
>NZ_LR782233.1|WP_001309158.1|2699567_2699798_-|hypothetical-protein
MKQPDFAKWYFYQLLKDYEGEQLYLNELGYVYGNEEKTNEIVKNNPGYVVKIFEEKMVNELKIRTRMMKILRKIYV
>NZ_LR782233.1|WP_175058609.1|2702507_2703221_+|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAEHLAQETGATAVFTDSADRDAVIDVVRKSGALDIPVVNAGIGVFGDATELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NZ_LR782233.1|WP_001296693.1|2704026_2704161_+|pyr-operon-leader-peptide
MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
>NZ_LR782233.1|WP_096983706.1|2704163_2705099_+|aspartate-carbamoyltransferase
MANPLYQKHIISINDLSRDELNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL
>NZ_LR782233.1|WP_000148581.1|2705111_2705573_+|aspartate-carbamoyltransferase-regulatory-subunit
MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN

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Crispr_ID: NZ_LR782233_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_7

3077874-3078006

Orphan

Consensus_repeat	Method
TGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACGGGTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782233_7

>merge|NZ_LR782233|7|3077874-3078006|CRISPRCasFinder
TGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACGGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACGGGTCG

>NZ_LR782233|7|6|3077874-3078006|CRISPRCasFinder
TGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACGGGTCG	GCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGAT
TGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACGGGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_175058634.1\|3084280_3085321_-\|YiiG-family-protein	unknown	unknown	gnl\|CDD\|372366
NZ_LR782233.1\|WP_001591277.1\|3079513_3079960_+\|PTS-fructose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182141
NZ_LR782233.1\|WP_000144110.1\|3075143_3076613_+\|rhamnulokinase	unknown	unknown	gnl\|CDD\|182609
NZ_LR782233.1\|WP_001350266.1\|3076609_3077869_+\|L-rhamnose-isomerase	unknown	unknown	gnl\|CDD\|179217
NZ_LR782233.1\|WP_077698972.1\|3086500_3089551_+\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
NZ_LR782233.1\|WP_001166064.1\|3069917_3070901_-\|2-keto-3-deoxygluconate-transporter	unknown	unknown	gnl\|CDD\|273271
NZ_LR782233.1\|WP_001270237.1\|3069094_3069769_-\|6-N-hydroxylaminopurine-resistance-protein	unknown	unknown	gnl\|CDD\|183182
NZ_LR782233.1\|WP_000331377.1\|3089563_3090466_+\|formate-dehydrogenase-O-subunit-beta	unknown	unknown	gnl\|CDD\|273705
NZ_LR782233.1\|WP_175058632.1\|3081411_3082482_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182122
NZ_LR782233.1\|WP_001296618.1\|3073097_3074036_-\|HTH-type-transcriptional-activator-RhaR	unknown	unknown	gnl\|CDD\|184091
NZ_LR782233.1\|WP_000619492.1\|3078887_3079202_+\|L-rhamnose-mutarotase	unknown	unknown	gnl\|CDD\|131674
NZ_LR782233.1\|WP_175058633.1\|3082481_3084284_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182121
NZ_LR782233.1\|WP_001033719.1\|3066920_3067619_+\|envelope-stress-response-regulator-transcription-factor-CpxR	unknown	unknown	gnl\|CDD\|182864
NZ_LR782233.1\|WP_175058631.1\|3079970_3081422_+\|PTS-fructose-like-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|183120
NZ_LR782233.1\|WP_000063507.1\|3072066_3073101_+\|L-rhamnose/proton-symporter-RhaT	unknown	unknown	gnl\|CDD\|115061
NZ_LR782233.1\|WP_000217156.1\|3074019_3074856_-\|HTH-type-transcriptional-activator-RhaS	unknown	unknown	gnl\|CDD\|184094
NZ_LR782233.1\|WP_175058635.1\|3085473_3086307_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_LR782233.1\|WP_001179744.1\|3078053_3078878_+\|rhamnulose-1-phosphate-aldolase	unknown	unknown	gnl\|CDD\|179615
NZ_LR782233.1\|WP_000580417.1\|3067615_3068989_+\|envelope-stress-sensor-histidine-kinase-CpxA	unknown	unknown	gnl\|CDD\|236532
NZ_LR782233.1\|WP_001298417.1\|3071160_3071781_-\|superoxide-dismutase-[Mn]	unknown	unknown	gnl\|CDD\|182843

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_175058634.1\|3084280_3085321_-\|YiiG-family-protein	gnl\|CDD\|372366	pfam12889, DUF3829, Protein of unknown function (DUF3829). This is a small family of proteins from several bacterial species, whose function is not known. It may, however, be related to the GvpL_GvpF family of proteins, pfam06386.	2.35239e-82
NZ_LR782233.1\|WP_001591277.1\|3079513_3079960_+\|PTS-fructose-transporter-subunit-IIA	gnl\|CDD\|182141	PRK09913, PRK09913, PTS fructose transporter subunit IIA.	8.91361e-86
NZ_LR782233.1\|WP_000144110.1\|3075143_3076613_+\|rhamnulokinase	gnl\|CDD\|182609	PRK10640, rhaB, rhamnulokinase; Provisional.	0
NZ_LR782233.1\|WP_001350266.1\|3076609_3077869_+\|L-rhamnose-isomerase	gnl\|CDD\|179217	PRK01076, PRK01076, L-rhamnose isomerase; Provisional.	0
NZ_LR782233.1\|WP_077698972.1\|3086500_3089551_+\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
NZ_LR782233.1\|WP_001166064.1\|3069917_3070901_-\|2-keto-3-deoxygluconate-transporter	gnl\|CDD\|273271	TIGR00793, 2-keto-3-deoxygluconate_permease, 2-keto-3-deoxygluconate transporter. This family includes the characterized 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi. There are homologs of this protein found in both gram-positive and gram-negative bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.30978e-165
NZ_LR782233.1\|WP_001270237.1\|3069094_3069769_-\|6-N-hydroxylaminopurine-resistance-protein	gnl\|CDD\|183182	PRK11536, PRK11536, 6-N-hydroxylaminopurine resistance protein; Provisional.	4.53321e-180
NZ_LR782233.1\|WP_000331377.1\|3089563_3090466_+\|formate-dehydrogenase-O-subunit-beta	gnl\|CDD\|273705	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing. This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	1.25079e-161
NZ_LR782233.1\|WP_175058632.1\|3081411_3082482_+\|aminopeptidase	gnl\|CDD\|182122	PRK09864, PRK09864, aminopeptidase.	0
NZ_LR782233.1\|WP_001296618.1\|3073097_3074036_-\|HTH-type-transcriptional-activator-RhaR	gnl\|CDD\|184091	PRK13500, PRK13500, HTH-type transcriptional activator RhaR.	0
NZ_LR782233.1\|WP_000619492.1\|3078887_3079202_+\|L-rhamnose-mutarotase	gnl\|CDD\|131674	TIGR02625, L-rhamnose_mutarotase, L-rhamnose mutarotase. Members of this protein family are rhamnose mutarotase from Escherichia coli, previously designated YiiL as an uncharacterized protein, and close homologs also associated with rhamnose dissimilation operons in other bacterial genomes. Mutarotase is a term for an epimerase that changes optical activity. This enzyme was shown experimentally to interconvert alpha and beta stereoisomers of the pyranose form of L-rhamnose. The crystal structure of this small (104 amino acid) protein shows a locally asymmetric dimer with active site residues of His, Tyr, and Trp. [Energy metabolism, Sugars].	3.46584e-64
NZ_LR782233.1\|WP_175058633.1\|3082481_3084284_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|182121	PRK09863, PRK09863, putative frv operon regulatory protein; Provisional.	0
NZ_LR782233.1\|WP_001033719.1\|3066920_3067619_+\|envelope-stress-response-regulator-transcription-factor-CpxR	gnl\|CDD\|182864	PRK10955, PRK10955, envelope stress response regulator transcription factor CpxR.	7.11209e-169
NZ_LR782233.1\|WP_175058631.1\|3079970_3081422_+\|PTS-fructose-like-transporter-subunit-IIBC	gnl\|CDD\|183120	PRK11404, PRK11404, PTS fructose-like transporter subunit IIBC.	0
NZ_LR782233.1\|WP_000063507.1\|3072066_3073101_+\|L-rhamnose/proton-symporter-RhaT	gnl\|CDD\|115061	pfam06379, RhaT, L-rhamnose-proton symport protein (RhaT). This family consists of several bacterial L-rhamnose-proton symport protein (RhaT) sequences.	0
NZ_LR782233.1\|WP_000217156.1\|3074019_3074856_-\|HTH-type-transcriptional-activator-RhaS	gnl\|CDD\|184094	PRK13503, PRK13503, HTH-type transcriptional activator RhaS.	0
NZ_LR782233.1\|WP_175058635.1\|3085473_3086307_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	5.14485e-161
NZ_LR782233.1\|WP_001179744.1\|3078053_3078878_+\|rhamnulose-1-phosphate-aldolase	gnl\|CDD\|179615	PRK03634, PRK03634, rhamnulose-1-phosphate aldolase; Provisional.	0
NZ_LR782233.1\|WP_000580417.1\|3067615_3068989_+\|envelope-stress-sensor-histidine-kinase-CpxA	gnl\|CDD\|236532	PRK09470, cpxA, envelope stress sensor histidine kinase CpxA.	0
NZ_LR782233.1\|WP_001298417.1\|3071160_3071781_-\|superoxide-dismutase-[Mn]	gnl\|CDD\|182843	PRK10925, PRK10925, superoxide dismutase [Mn].	1.57037e-152

>NZ_LR782233.1|WP_001350266.1|3076609_3077869_+|L-rhamnose-isomerase
MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGLLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQITPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDRIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYLGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLENVRAYEKEILSRRG
>NZ_LR782233.1|WP_000144110.1|3075143_3076613_+|rhamnulokinase
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA
>NZ_LR782233.1|WP_000217156.1|3074019_3074856_-|HTH-type-transcriptional-activator-RhaS
MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQEQDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
>NZ_LR782233.1|WP_001296618.1|3073097_3074036_-|HTH-type-transcriptional-activator-RhaR
MVFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
>NZ_LR782233.1|WP_000063507.1|3072066_3073101_+|L-rhamnose/proton-symporter-RhaT
MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN
>NZ_LR782233.1|WP_001298417.1|3071160_3071781_-|superoxide-dismutase-[Mn]
MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVQKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK
>NZ_LR782233.1|WP_001166064.1|3069917_3070901_-|2-keto-3-deoxygluconate-transporter
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARVAKIEILGTVK
>NZ_LR782233.1|WP_001270237.1|3069094_3069769_-|6-N-hydroxylaminopurine-resistance-protein
MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTDLGLEGDEQAEKKIHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYIGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGLVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
>NZ_LR782233.1|WP_000580417.1|3067615_3068989_+|envelope-stress-sensor-histidine-kinase-CpxA
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
>NZ_LR782233.1|WP_001033719.1|3066920_3067619_+|envelope-stress-response-regulator-transcription-factor-CpxR
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALSLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
>NZ_LR782233.1|WP_001179744.1|3078053_3078878_+|rhamnulose-1-phosphate-aldolase
MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQILVKVYSMGGMKQTISREELIALGQRFGVTPLASALAL
>NZ_LR782233.1|WP_000619492.1|3078887_3079202_+|L-rhamnose-mutarotase
MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKAHNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANADNSPVSSELQEVFYLP
>NZ_LR782233.1|WP_001591277.1|3079513_3079960_+|PTS-fructose-transporter-subunit-IIA
MAALTASCIDLNIQGNGAYSILKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGIAVPHGKSACVKQPFVLFARKTQAIDWQASDGEDVNCWICLGVPQSGEEDQVKLIGTLCRKIIHQDFINQLRQGDTNQVLALLNQTLSS
>NZ_LR782233.1|WP_175058631.1|3079970_3081422_+|PTS-fructose-like-transporter-subunit-IIBC
MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGYTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTQQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLVIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH
>NZ_LR782233.1|WP_175058632.1|3081411_3082482_+|aminopeptidase
MNIELLQQLCEASAVSGDEQEVRDILINTLEPCINEITFDGLGSFVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDNIKYPLKLGNGPGLMLFDKRYFPNQKLVAALKSCATQNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLIRDFLTTLTAEKVNAFSQFRQVD
>NZ_LR782233.1|WP_175058633.1|3082481_3084284_+|PTS-sugar-transporter-subunit-IIA
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDGTEEKRIILLANLLRKDPFLIPLAGVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYTLRNQLTDEWPQYPGNEIKQIVEQSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLHCRVIIARSLGELVAIREEIEPLLIINNSHYLLDDAVNNCITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYLNVRGESWQHITRQICAQLVTQHHITTDEAQRIIARESEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPIEVNNEVINHVLIACAAADARHELKIFSYLASVLCQHPAETIAGLTGYEAFMALLHKGVNCVGCAASDTAFIIKNV
>NZ_LR782233.1|WP_175058634.1|3084280_3085321_-|YiiG-family-protein
MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAPEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQSSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTRKNYKDDAFAKGKTLHQTFLKNLEAFEAVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVDDSFPRALREYNEMVDDYNSLR
>NZ_LR782233.1|WP_175058635.1|3085473_3086307_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MKKTQQKEIENVTNITGVRQIELWRRDDLRHPRLDEVAEEVPVALVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN
>NZ_LR782233.1|WP_077698972.1|3086500_3089551_+|formate-dehydrogenase-N-subunit-alpha
MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSTWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV
>NZ_LR782233.1|WP_000331377.1|3089563_3090466_+|formate-dehydrogenase-O-subunit-beta
MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK

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Crispr_ID: NZ_LR782233_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782233_8

4274126-4275312

Orphan

I-E:NA

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

19 spacers

The CRISPR arrays of NZ_LR782233_8

>merge|NZ_LR782233|8|4274126-4275312|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGCAATTCCCGCAGCGCCTGCCGCAGTATTCACCGAGTTCCCCGCGCCAGCGGGGATAAACCGTTGAACGATTTTGACCTGCGCCGTTTTGAGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGCTGACGCAACGATTGACCGTGCCGCCGGGTTGGAGTTCCCCGCGCCAGCGGGGATAAACCGCCGCCGTTATATGGAGCGATTCCGGTTTGGTAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGGTGGCGGTGGTGCTGTAATTCACACCGGTAGAGTTCCCCGCGCCAGCGGGATAAACCGTATTCCCCAGTCACCCCCGCCACCAAAATCAGAGTTCCCCGCGCCAGCGGGGGATAAACCGATTTTTCAGACTCATCAAAATAATCCTTTAATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGAATTTTGCACACTACGTCGCTGAGGGTAAAGAGTTCCCCGCGCCAGCGGGGATAAACCGCATTGCCTTTGCAGCGTCTTTCCGATCATTCAGAGTTCCCCGCGCCAGCGGGGATAAACCGAACGTGAGATACGCCTCCCAGCGGCGCTCGGTGAGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCAAACAGTATCACCGCGTTAACGCCCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGCCACACACGTCGAGCTGGTGGGGGTTAATGCTGAGTTCCCCGCGCCAGCGGGGATAAACCGACACCTCTACTGACGTTCCTGAACAAGAAGATGAGTTCCCCGCGCCAGCGGGGATAAACCGCTCTGTCGTTTTCATATTACCGGCCTGCCACTGAGTTCCCCGCGCCAGCGGGGATAAACCGGCCGAGGAATGCAGCATTTTGCATGGGAAATGAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCGATATTTTCCTGACGTCGAAAAAAGAGGACGAGTTCCCCGCGCCAGCGGGATAAACCGCTGGGCGAGGGAGAAACGCCAGCGGAGCAGTAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGATCACAAGGGCGGCTATCAGGGTGGACGGAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCTCTCAATTTGTAACGTCTGCAATGTCAGGCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_LR782233|8|2|4274126-4275304|PILER-CR
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCAATTCCCGCAGCGCCTGCCGCAGTATTCACC
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGTTGAACGATTTTGACCTGCGCCGTTTTGAGTC
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCTGACGCAACGATTGACCGTGCCGCCGGGTTG
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCCGCCGTTATATGGAGCGATTCCGGTTTGGTA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGGGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGA	TAAACCGTATTCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGG	GATAAACCGATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCGAATTTTGCACACTACGTCGCTGAGGGTAAA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGAACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCTCTGTCGTTTTCATATTACCGGCCTGCCACT
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGGCCGAGGAATGCAGCATTTTGCATGGGAAATGA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCCGATATTTTCCTGACGTCGAAAAAAGAGGAC
GAGTTCCCCGCGCCAGCGGGA	TAAACCGCTGGGCGAGGGAGAAACGCCAGCGGAGCAGTA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGGGATCACAAGGGCGGCTATCAGGGTGGACGGA
GAGTTCCCCGCGCCAGCGGGG	ATAAACCGCCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGCGCCAGCGGGG

>NZ_LR782233|8|7|4274126-4275312|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CAATTCCCGCAGCGCCTGCCGCAGTATTCACC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAACGATTTTGACCTGCGCCGTTTTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGACGCAACGATTGACCGTGCCGCCGGGTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCGTTATATGGAGCGATTCCGGTTTGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGATAAACCGT	ATTCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGGGATAAACC	GATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATTTTGCACACTACGTCGCTGAGGGTAAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGTCGTTTTCATATTACCGGCCTGCCACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGAGGAATGCAGCATTTTGCATGGGAAATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGATATTTTCCTGACGTCGAAAAAAGAGGAC
GAGTTCCCCGCGCCAGCGGGATAAACCGC	TGGGCGAGGGAGAAACGCCAGCGGAGCAGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCACAAGGGCGGCTATCAGGGTGGACGGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_LR782233|8|1|4274126-4275312|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CAATTCCCGCAGCGCCTGCCGCAGTATTCACC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAACGATTTTGACCTGCGCCGTTTTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGACGCAACGATTGACCGTGCCGCCGGGTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGCCGTTATATGGAGCGATTCCGGTTTGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGATAAACCGT	ATTCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGGGATAAACC	GATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATTTTGCACACTACGTCGCTGAGGGTAAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGTCGTTTTCATATTACCGGCCTGCCACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGAGGAATGCAGCATTTTGCATGGGAAATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGATATTTTCCTGACGTCGAAAAAAGAGGAC
GAGTTCCCCGCGCCAGCGGGATAAACCGC	TGGGCGAGGGAGAAACGCCAGCGGAGCAGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCACAAGGGCGGCTATCAGGGTGGACGGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782233.1\|WP_000226815.1\|4265018_4267253_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_LR782233.1\|WP_000021342.1\|4279054_4279840_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_LR782233.1\|WP_000581937.1\|4267330_4267579_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_LR782233.1\|WP_000036723.1\|4270729_4272028_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_LR782233.1\|WP_000059426.1\|4279909_4281364_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_LR782233.1\|WP_000254750.1\|4267578_4267914_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_LR782233.1\|WP_000046817.1\|4263669_4264971_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_LR782233.1\|WP_175058724.1\|4281385_4282795_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_LR782233.1\|WP_021580985.1\|4277458_4278736_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_LR782233.1\|WP_175058723.1\|4272087_4272960_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_LR782233.1\|WP_000210878.1\|4269004_4270642_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_LR782233.1\|WP_001071648.1\|4267985_4268777_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_LR782233.1\|WP_001298156.1\|4285399_4286671_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_LR782233.1\|WP_021576416.1\|4275953_4277432_-\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_LR782233.1\|WP_096880719.1\|4283548_4284409_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_LR782233.1\|WP_000109509.1\|4285148_4285409_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_LR782233.1\|WP_000108301.1\|4286748_4287111_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_LR782233.1\|WP_137526986.1\|4282772_4283552_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_LR782233.1\|WP_000098258.1\|4259284_4260625_+\|glucarate-dehydratase	unknown	unknown	gnl\|CDD\|211799
NZ_LR782233.1\|WP_001199974.1\|4273253_4273925_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_LR782233.1\|WP_000226815.1\|4265018_4267253_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_LR782233.1\|WP_000021342.1\|4279054_4279840_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.62537e-140
NZ_LR782233.1\|WP_000581937.1\|4267330_4267579_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_LR782233.1\|WP_000036723.1\|4270729_4272028_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_LR782233.1\|WP_000059426.1\|4279909_4281364_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.68197e-83
NZ_LR782233.1\|WP_000254750.1\|4267578_4267914_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.22533e-74
NZ_LR782233.1\|WP_000046817.1\|4263669_4264971_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_LR782233.1\|WP_175058724.1\|4281385_4282795_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.0698e-51
NZ_LR782233.1\|WP_021580985.1\|4277458_4278736_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	3.8206e-29
NZ_LR782233.1\|WP_175058723.1\|4272087_4272960_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	9.65574e-94
NZ_LR782233.1\|WP_000210878.1\|4269004_4270642_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_LR782233.1\|WP_001071648.1\|4267985_4268777_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_LR782233.1\|WP_001298156.1\|4285399_4286671_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	4.50903e-126
NZ_LR782233.1\|WP_021576416.1\|4275953_4277432_-\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	3.83287e-110
NZ_LR782233.1\|WP_096880719.1\|4283548_4284409_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	9.77953e-88
NZ_LR782233.1\|WP_000109509.1\|4285148_4285409_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	6.64358e-43
NZ_LR782233.1\|WP_000108301.1\|4286748_4287111_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	1.62548e-59
NZ_LR782233.1\|WP_137526986.1\|4282772_4283552_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.00256e-60
NZ_LR782233.1\|WP_000098258.1\|4259284_4260625_+\|glucarate-dehydratase	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
NZ_LR782233.1\|WP_001199974.1\|4273253_4273925_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.36973e-155

>NZ_LR782233.1|WP_001199974.1|4273253_4273925_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
>NZ_LR782233.1|WP_175058723.1|4272087_4272960_-|YgcG-family-protein
MRYFILIFTLVCSFVVAQPTIVPQLQQQVTDLTSSLNSQEKKELTRKLESIFNNTQVQIAVLIIPTTKDETIEQYAARVFDNWRLGDAKRNDGILIIVAWSDRTVRIQIGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAIIALNNRLTSQHQYSVNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGNNFCRAFKSSVCISTVYLIDLFLFSDQTFSIAVFSFFFAFTIIMVFTWLCVPQKKASGRSYHSDSGGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_LR782233.1|WP_000036723.1|4270729_4272028_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_LR782233.1|WP_000210878.1|4269004_4270642_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_LR782233.1|WP_001071648.1|4267985_4268777_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_LR782233.1|WP_000254750.1|4267578_4267914_+|endoribonuclease-MazF
MVSRYVPDTGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_LR782233.1|WP_000581937.1|4267330_4267579_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_LR782233.1|WP_000226815.1|4265018_4267253_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_LR782233.1|WP_000046817.1|4263669_4264971_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLECFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVEPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_LR782233.1|WP_000098258.1|4259284_4260625_+|glucarate-dehydratase
MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNEAIKIGTYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPLEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR
>NZ_LR782233.1|WP_021576416.1|4275953_4277432_-|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFASHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSENAAVMEKFNIPRQMLFDVQMPGTILGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCHEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYTTAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_LR782233.1|WP_021580985.1|4277458_4278736_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVVQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALGMVIIFTFLLFQKIRTADSAPAMASSK
>NZ_LR782233.1|WP_000021342.1|4279054_4279840_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_LR782233.1|WP_000059426.1|4279909_4281364_+|FAD-binding-oxidoreductase
MSLSRVAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYVLEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_LR782233.1|WP_175058724.1|4281385_4282795_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSELLGLFLGSLVLGWISDHIGRQKIFTFSFMLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRRFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_LR782233.1|WP_137526986.1|4282772_4283552_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAADQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGTSMSLTALSMGDERALHWLRYLMALGFEDAVLLETAADLRFAPEFVARHIAEWQYQNPLELIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLVDGQTVAEKAQKLWQDYLRQRMQP
>NZ_LR782233.1|WP_096880719.1|4283548_4284409_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPETFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAEKNATLPSGMQQLNIVPGALPDWLVSIENLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVCNSKFVVAINHDASAAVFSQADVGVVDDWKAVLEALVTNIHADCQ
>NZ_LR782233.1|WP_000109509.1|4285148_4285409_-|ferredoxin-family-protein
MSVARNLWRAADAPHIVPADSVERQTAQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_LR782233.1|WP_001298156.1|4285399_4286671_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLTLEPSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLRSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRVWPGLMQDISRDLWDQGNTPVPPLRQLLWRHLRRHGLWHLTGDVIRSLRCL
>NZ_LR782233.1|WP_000108301.1|4286748_4287111_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLFKDFTFEAAHRLPHVPQGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR782233_3	3.1\|1523089\|40\|NZ_LR782233\|CRISPRCasFinder	1523089-1523128	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
NZ_LR782233_5	5.1\|2547543\|42\|NZ_LR782233\|PILER-CR	2547543-2547584	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	1	0.976
NZ_LR782233_5	5.2\|2547602\|40\|NZ_LR782233\|PILER-CR	2547602-2547641	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	1	0.975
NZ_LR782233_8	8.37\|4275191\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275191-4275222	32	MT330372	Cronobacter phage JC01, complete genome	47177-47208	1	0.969
NZ_LR782233_2	2.1\|926411\|38\|NZ_LR782233\|CRISPRCasFinder	926411-926448	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	271-321	4	0.922
NZ_LR782233_8	8.18\|4275183\|40\|NZ_LR782233\|PILER-CR	4275183-4275222	40	MT330372	Cronobacter phage JC01, complete genome	47177-47216	6	0.85
NZ_LR782233_8	8.24\|4274399\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274399-4274430	32	AB452989	Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds	1966-1997	8	0.75
NZ_LR782233_8	8.26\|4274519\|33\|NZ_LR782233\|CRISPRCasFinder,CRT	4274519-4274551	33	MN693005	Marine virus AFVG_117M50, complete genome	6262-6294	8	0.758
NZ_LR782233_8	8.30\|4274764\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274764-4274795	32	NZ_CP010769	Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence	121002-121033	8	0.75
NZ_LR782233_8	8.32\|4274886\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274886-4274917	32	MK016501	Mycobacterium phage Nebkiss, complete genome	21454-21485	8	0.75
NZ_LR782233_8	8.32\|4274886\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274886-4274917	32	NC_026590	Mycobacterium phage Gaia, complete genome	21453-21484	8	0.75
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14239-14289	9	0.824
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7392-7442	9	0.824
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84216-84266	9	0.824
NZ_LR782233_8	8.20\|4274155\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274155-4274186	32	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	302507-302538	9	0.719
NZ_LR782233_8	8.21\|4274216\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274216-4274247	32	NZ_CP019604	Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence	224225-224256	9	0.719
NZ_LR782233_8	8.21\|4274216\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274216-4274247	32	NZ_AP022566	Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence	35673-35704	9	0.719
NZ_LR782233_8	8.25\|4274460\|30\|NZ_LR782233\|CRISPRCasFinder,CRT	4274460-4274489	30	MK552327	Pseudomonas phage Psa21, complete genome	141438-141467	9	0.7
NZ_LR782233_8	8.26\|4274519\|33\|NZ_LR782233\|CRISPRCasFinder,CRT	4274519-4274551	33	MK295204	Shigella phage vB_SdyM_006, complete genome	16121-16153	9	0.727
NZ_LR782233_8	8.26\|4274519\|33\|NZ_LR782233\|CRISPRCasFinder,CRT	4274519-4274551	33	MG696114	Proteus phage phiP4-3, complete genome	149804-149836	9	0.727
NZ_LR782233_8	8.35\|4275070\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275070-4275101	32	MK075004	Staphylococcus phage phiSP119-1, complete genome	44087-44118	9	0.719
NZ_LR782233_8	8.35\|4275070\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275070-4275101	32	MK075002	Staphylococcus phage phiSP38-1, complete genome	37086-37117	9	0.719
NZ_LR782233_8	8.35\|4275070\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275070-4275101	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1893191-1893222	9	0.719
NZ_LR782233_8	8.35\|4275070\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275070-4275101	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1746140-1746171	9	0.719
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4114-4164	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208981-209031	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4113-4163	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219475-219525	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4113-4163	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210309-210359	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4113-4163	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191264-191314	10	0.804
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12112-12162	10	0.804
NZ_LR782233_8	8.26\|4274519\|33\|NZ_LR782233\|CRISPRCasFinder,CRT	4274519-4274551	33	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	5394-5426	10	0.697
NZ_LR782233_8	8.35\|4275070\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4275070-4275101	32	NZ_CP017591	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence	161448-161479	10	0.688
NZ_LR782233_5	5.2\|2547602\|40\|NZ_LR782233\|PILER-CR	2547602-2547641	40	NZ_CP034685	Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence	143235-143274	11	0.725
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	11	0.788
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	11	0.788
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	11	0.788
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87121-87171	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229334-229384	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	43-93	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239828-239878	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	42-92	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18334-18384	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230740-230790	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	42-92	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211710-211760	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	42-92	11	0.784
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	154-204	11	0.784
NZ_LR782233_8	8.31\|4274825\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274825-4274856	32	KU160664	Arthrobacter phage Salgado, complete genome	140-171	11	0.656
NZ_LR782233_8	8.31\|4274825\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274825-4274856	32	MF140418	Arthrobacter phage LiSara, complete genome	140-171	11	0.656
NZ_LR782233_8	8.31\|4274825\|32\|NZ_LR782233\|CRISPRCasFinder,CRT	4274825-4274856	32	KU160654	Arthrobacter phage Laroye, complete genome	140-171	11	0.656
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30161-30211	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229233-229283	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229435-229485	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239727-239777	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239929-239979	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230639-230689	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230841-230891	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211609-211659	12	0.765
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211811-211861	12	0.765
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	13	0.75
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	13	0.75
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	13	0.75
NZ_LR782233_6	6.1\|2692399\|52\|NZ_LR782233\|CRISPRCasFinder	2692399-2692450	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	13	0.75
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3372-3422	13	0.745
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3371-3421	13	0.745
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15002-15052	13	0.745
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3371-3421	13	0.745
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3371-3421	13	0.745
NZ_LR782233_7	7.1\|3077915\|51\|NZ_LR782233\|CRISPRCasFinder	3077915-3077965	51	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	72-122	13	0.745

1. spacer 3.1|1523089|40|NZ_LR782233|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

2. spacer 5.1|2547543|42|NZ_LR782233|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

3. spacer 5.2|2547602|40|NZ_LR782233|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.975

catggcgtagaaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********************************.*******

4. spacer 8.37|4275191|32|NZ_LR782233|CRISPRCasFinder,CRT matches to MT330372 (Cronobacter phage JC01, complete genome) position: , mismatch: 1, identity: 0.969

ggatcacaagggcggctatcagggtggacgga	CRISPR spacer
ggatcacaagggcggctatcagggaggacgga	Protospacer
************************ *******

5. spacer 2.1|926411|38|NZ_LR782233|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

6. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 4, identity: 0.922

gcaatag-ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
-taacggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	Protospacer
 .**..* ********************************************

7. spacer 8.18|4275183|40|NZ_LR782233|PILER-CR matches to MT330372 (Cronobacter phage JC01, complete genome) position: , mismatch: 6, identity: 0.85

ataaaccg----ggatcacaagggcggctatcagggtggacgga	CRISPR spacer
----agcgcgacggatcacaagggcggctatcagggaggacgga	Protospacer
    * **    ************************ *******

8. spacer 8.24|4274399|32|NZ_LR782233|CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75

gggtggcggtggtgctgtaattcacaccggta	CRISPR spacer
ggcgcgtggtggtgctgttgttcacaccggcc	Protospacer
**   *.*********** .**********.

9. spacer 8.26|4274519|33|NZ_LR782233|CRISPRCasFinder,CRT matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 8, identity: 0.758

gatttttcagactcatcaaaataatcctttaat	CRISPR spacer
ctttgttcatactcatcaaaataatctataact	Protospacer
  ** **** ****************. * * *

10. spacer 8.30|4274764|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 8, identity: 0.75

ccgtcaaacagtatcaccgcgttaacgcccgc	CRISPR spacer
cccacaaacagtagcatcgcgttaacgatcaa	Protospacer
**  ********* **.********** .*.

11. spacer 8.32|4274886|32|NZ_LR782233|CRISPRCasFinder,CRT matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.75

acacctctactgacgttcctgaacaagaagat	CRISPR spacer
acacctccactggcgttcctgaacgtattcat	Protospacer
*******.****.***********. .   **

12. spacer 8.32|4274886|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.75

acacctctactgacgttcctgaacaagaagat	CRISPR spacer
acacctccactggcgttcctgaacgtattcat	Protospacer
*******.****.***********. .   **

13. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.824

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacgatttgtaggcctgataagacgcgacagcggcgcatcaggcgctggt	Protospacer
. *  * *************************** **********..**.*

14. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 9, identity: 0.824

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tgcagt-tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***.*  ******** ************ ******************. .

15. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 9, identity: 0.824

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tgcagt-tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***.*  ******** ************ ******************. .

16. spacer 8.20|4274155|32|NZ_LR782233|CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

caattcccgcagcgcctgccgcagtattcacc	CRISPR spacer
gaggtcccgcagcgcctgacgcagcatggcgc	Protospacer
 *. ************** *****.**    *

17. spacer 8.21|4274216|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_CP019604 (Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaacgattttgacctgcgccgttttgagtc	CRISPR spacer
atgaacgattttgacgcgcgccgtgcttcgct	Protospacer
 ************** .******* .*  *..

18. spacer 8.21|4274216|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_AP022566 (Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaacgattttgacctgcgccgttttgagtc	CRISPR spacer
ctccttgtttttgaactgcgccgtcttgagtt	Protospacer
.*   .* ****** *********.******.

19. spacer 8.25|4274460|30|NZ_LR782233|CRISPRCasFinder,CRT matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 9, identity: 0.7

attccccagtcacccccgccaccaaaatca	CRISPR spacer
ccactgtcatcaccccctccaccaaaatca	Protospacer
 . *. . .******** ************

20. spacer 8.26|4274519|33|NZ_LR782233|CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 9, identity: 0.727

gatttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
cgtttttcataatcatcaaaataatc-----atgacca	Protospacer
 .******* * **************     **

21. spacer 8.26|4274519|33|NZ_LR782233|CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 9, identity: 0.727

gatttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
cgtttttcataatcatcaaaataatc-----atgacca	Protospacer
 .******* * **************     **

22. spacer 8.35|4275070|32|NZ_LR782233|CRISPRCasFinder,CRT matches to MK075004 (Staphylococcus phage phiSP119-1, complete genome) position: , mismatch: 9, identity: 0.719

ccgatattttcctgacgtcgaaaaaagaggac	CRISPR spacer
gatattttttcctgatgtcgaaaaaagtaagc	Protospacer
   ** *********.*********** ...*

23. spacer 8.35|4275070|32|NZ_LR782233|CRISPRCasFinder,CRT matches to MK075002 (Staphylococcus phage phiSP38-1, complete genome) position: , mismatch: 9, identity: 0.719

ccgatattttcctgacgtcgaaaaaagaggac	CRISPR spacer
gatattttttcctgatgtcgaaaaaagtaagc	Protospacer
   ** *********.*********** ...*

24. spacer 8.35|4275070|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgatattttcctgacgtcgaaaaaagaggac	CRISPR spacer
cgagagatatcctgatctcgaaaaaagaggac	Protospacer
* .. . * ******. ***************

25. spacer 8.35|4275070|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgatattttcctgacgtcgaaaaaagaggac	CRISPR spacer
cgagagatatcctgatctcgaaaaaagaggac	Protospacer
* .. . * ******. ***************

26. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.804

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

27. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.804

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

28. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.804

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

29. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.804

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

30. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.804

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

31. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.804

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

32. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.804

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cacaa-gtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 .*** . ******** ************ ******************. ..

33. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.804

--gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaacagtgg--gtaggcctgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
  .**.*.*  ******************* ******************. .

34. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.804

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaa	Protospacer
* .  * *.******************* *****************..**

35. spacer 8.26|4274519|33|NZ_LR782233|CRISPRCasFinder,CRT matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

gatttttcagactcatcaaaataatcctttaat	CRISPR spacer
tccctatcatattcatcaaaataatcctttgcg	Protospacer
  ..* *** *.******************.

36. spacer 8.35|4275070|32|NZ_LR782233|CRISPRCasFinder,CRT matches to NZ_CP017591 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence) position: , mismatch: 10, identity: 0.688

ccgatattttcctgacgtcgaaaaaagaggac	CRISPR spacer
gcgatattttcctgacatcaaaaatgaaattg	Protospacer
 ***************.**.**** ..*.

37. spacer 5.2|2547602|40|NZ_LR782233|PILER-CR matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 11, identity: 0.725

catggcgtagaaaaaagaaattttcaatattgttttatgg-	CRISPR spacer
aacacaatagaaaaaagaaattttcaaccttg-tttatact	Protospacer
 *..  .********************. *** *****.

38. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 11, identity: 0.788

gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
acgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccga	Protospacer
.*.   .***************.******* *****************  *

39. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggtaacg-gtttgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
 *.* .* ..*.***********.*************************  *

40. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.788

--gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
tggcaacgg--ctgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
  *** .*.  ..***********.*************************  *

41. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
attgattttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
.. .   *********************.******************.*

42. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

43. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

44. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

45. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

46. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

47. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

48. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

49. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  *. * ********************* .*****************. ..

50. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   * * ******** ************ ******************....

51. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.784

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
tcgggtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat	Protospacer
 *..   * ******************* **************** *..**

52. spacer 8.31|4274825|32|NZ_LR782233|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

53. spacer 8.31|4274825|32|NZ_LR782233|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

54. spacer 8.31|4274825|32|NZ_LR782233|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

55. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtgcagattgtaggcatgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
*..  ..******** ************ ******************...

56. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

57. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

58. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

59. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

60. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

61. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

62. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

63. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.765

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
  .. * ********************* .*****************. ..

64. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************

65. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************

66. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************

67. spacer 6.1|2692399|52|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************

68. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.745

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

69. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.745

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

70. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.745

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgg	Protospacer
 **.. . *.****** ************ *****************.. .

71. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.745

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

72. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.745

-gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
cgcgg-gctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 **.. . *.****** ************ *****************.. ..

73. spacer 7.1|3077915|51|NZ_LR782233|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 13, identity: 0.745

gcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
ttcaggtccgtaggcatgataagacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 . * . ..****** ************ ******************.*..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

453744 : 463186

Enterobacteria_phage(85.71%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_175058376.1\|453744_454671_+	glycine betaine ABC transporter ATP binding protein YehX	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	27.3
WP_000783108.1\|454675_455407_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_021559962.1\|455387_455495_-	protein YohO	NA	NA	NA	NA
WP_001240405.1\|455554_456286_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.2e-111	99.0
WP_001295431.1\|456507_458193_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001308766.1\|458189_458909_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|458955_459426_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001296231.1\|459466_459928_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001357189.1\|460052_462053_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.8
WP_001357188.1\|462049_463186_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.4

DBSCAN-SWA_2

475146 : 540586

Escherichia_phage(50.0%)

portal,head,tail,lysis,plate,integrase,capsid,terminase,holin,tRNA

attL 502316:502342|attR 535861:535887

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001296226.1\|475146_477180_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	2.3e-54	27.4
WP_001005448.1\|477311_478421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_021520886.1\|478683_478965_+	YehE family protein	NA	NA	NA	NA
WP_000830479.1\|479258_479801_+	fimbrial protein	NA	NA	NA	NA
WP_000677331.1\|479881_480556_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_175058379.1\|480571_483052_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_175058380.1\|483067_484102_+	putative fimbrial-like adhesin protein	NA	NA	NA	NA
WP_000153067.1\|484182_484521_-	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_000134614.1\|484739_485564_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000019944.1\|485684_485957_+	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_001195613.1\|486179_486968_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000822274.1\|486964_487765_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_175058381.1\|487829_488648_+	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	7.2e-23	38.0
WP_000434038.1\|488699_489446_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000011945.1\|489419_490385_-	sugar kinase	NA	NA	NA	NA
WP_024224710.1\|490381_491386_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	5.8e-14	29.4
WP_000858523.1\|491382_492660_-	MFS transporter	NA	NA	NA	NA
WP_175058382.1\|492916_493969_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_175058383.1\|494195_495050_+	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_000853835.1\|495078_496341_+	tagatose-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
WP_000182899.1\|496350_496803_+	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000823289.1\|496833_497118_+	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000490682.1\|497121_498477_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_000844231.1\|498524_499565_+	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_000178556.1\|499664_500444_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_021541114.1\|500525_501425_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	4.4e-13	29.5
WP_001441996.1\|501839_502157_+	hypothetical protein	NA	NA	NA	NA
502316:502342	attL	NA	NA	NA	NA
WP_175058747.1\|502421_503399_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	2.3e-185	98.8
WP_001306384.1\|503548_503848_-	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	2.5e-50	100.0
WP_000043869.1\|503962_504238_+	hypothetical protein	Q1JS62	Enterobacteria_phage	1.3e-48	100.0
WP_001005162.1\|504248_504419_+	hypothetical protein	S4TNZ7	Salmonella_phage	6.1e-25	100.0
WP_000217670.1\|504415_504916_+	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_001530544.1\|504979_505204_+	DUF2732 family protein	S4TP68	Salmonella_phage	1.4e-32	98.6
WP_001277958.1\|505203_505506_+	DUF5405 family protein	U5N0U2	Enterobacteria_phage	5.0e-46	98.0
WP_001113263.1\|505505_505730_+	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	2.2e-35	100.0
WP_000027667.1\|505726_506002_+	DUF5405 family protein	Q858T5	Yersinia_virus	3.8e-45	100.0
WP_175058384.1\|509035_509572_-	hypothetical protein	NA	NA	NA	NA
WP_175058385.1\|509938_510373_-	hypothetical protein	NA	NA	NA	NA
WP_175058386.1\|510400_511096_-	hypothetical protein	NA	NA	NA	NA
WP_175058387.1\|511790_512174_-	hypothetical protein	NA	NA	NA	NA
WP_115915329.1\|512404_512551_+	vacuolating cytotoxin domain-containing protein	M1TAP7	Escherichia_phage	1.7e-07	100.0
WP_000038159.1\|512527_513562_-\|portal	phage portal protein	M1SV64	Escherichia_phage	2.1e-200	99.4
WP_000156861.1\|513561_515334_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001085975.1\|515507_516362_+\|capsid	GPO family capsid scaffolding protein	Q94MI4	Enterobacteria_phage	3.5e-137	98.6
WP_001248558.1\|516420_517494_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	6.7e-202	100.0
WP_097404393.1\|517497_518241_+\|terminase	terminase endonuclease subunit	Q94MK6	Enterobacteria_phage	3.3e-123	98.0
WP_000988642.1\|518340_518850_+\|head	head completion/stabilization protein	A0A0F7L9Y3	Escherichia_phage	1.9e-90	100.0
WP_000846399.1\|518849_519053_+\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000123124.1\|519056_519338_+\|holin	phage holin family protein	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_001144101.1\|519337_519835_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_175058388.1\|519849_520275_+	protein lysA	A0A0F7LBP4	Escherichia_phage	1.7e-55	92.9
WP_096211250.1\|520262_520688_+\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	5.2e-65	95.0
WP_072275434.1\|520659_520833_+\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	2.0e-23	93.0
WP_096997806.1\|520795_521263_+\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	5.1e-82	98.7
WP_096211249.1\|521255_521708_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	4.1e-76	98.7
WP_175058389.1\|522741_523377_+\|plate	phage baseplate assembly protein V	Q858V7	Yersinia_virus	3.4e-113	98.1
WP_089584434.1\|523373_523721_+	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	3.8e-58	99.1
WP_097555553.1\|523725_524634_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	1.4e-160	99.3
WP_175058390.1\|529156_530347_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.7
WP_001251408.1\|530359_530878_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031303.1\|530933_531209_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|531241_531361_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_119186429.1\|531353_533801_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	96.0
WP_049038111.1\|533815_534295_+\|tail	phage tail protein	O64315	Escherichia_phage	2.5e-84	98.7
WP_096969611.1\|534294_535458_+	phage late control D family protein	A0A0F7LDZ2	Escherichia_phage	5.4e-205	99.0
WP_000468308.1\|535539_535758_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000476019.1\|536031_537393_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	5.5e-217	99.5
535861:535887	attR	NA	NA	NA	NA
WP_175058391.1\|537495_537792_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000929408.1\|537951_538284_-	YegP family protein	NA	NA	NA	NA
WP_000137877.1\|538463_539186_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.6
WP_000675178.1\|539182_540586_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	7.0e-34	29.8

DBSCAN-SWA_3

999985 : 1048589

Enterobacteria_phage(38.89%)

tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260849.1\|999985_1000807_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|1000906_1000990_-	hypothetical protein	NA	NA	NA	NA
WP_024227007.1\|1001082_1001418_-	acid shock protein	NA	NA	NA	NA
WP_175058439.1\|1003176_1004070_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225276.1\|1004204_1005425_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919226.1\|1005549_1006245_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_001592042.1\|1006197_1007490_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
WP_000148699.1\|1007649_1008264_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	6.6e-29	36.3
WP_001357323.1\|1008520_1008826_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001350228.1\|1008933_1009644_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138584.1\|1009646_1010207_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705201.1\|1010241_1010583_-	DUF1283 family protein	NA	NA	NA	NA
WP_000598292.1\|1010717_1011044_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_001298659.1\|1011249_1012464_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	2.8e-47	29.5
WP_000836083.1\|1012475_1013495_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	7.4e-17	25.9
WP_001389342.1\|1013552_1013681_+	hypothetical protein	NA	NA	NA	NA
WP_175058440.1\|1015000_1015252_-	excisionase family protein	S4TND0	Salmonella_phage	1.1e-14	48.7
WP_175058441.1\|1017851_1018043_-	DUF1482 family protein	NA	NA	NA	NA
WP_000854562.1\|1018039_1018228_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_175058750.1\|1019621_1020041_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	3.1e-22	46.4
WP_000476993.1\|1020108_1020336_+	transcriptional regulator	NA	NA	NA	NA
WP_175058442.1\|1020319_1020556_+	hypothetical protein	NA	NA	NA	NA
WP_175058443.1\|1023302_1023932_+	hypothetical protein	NA	NA	NA	NA
WP_044703989.1\|1025362_1025500_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.1e-13	95.6
WP_000980999.1\|1025716_1025968_+	hypothetical protein	NA	NA	NA	NA
WP_023140913.1\|1026034_1026313_+	hypothetical protein	A0A077KB22	Edwardsiella_phage	6.1e-06	37.1
WP_000066484.1\|1028803_1029019_+	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000066495.1\|1031643_1031856_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_175058444.1\|1033560_1033767_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	2.5e-25	89.7
WP_001072975.1\|1036919_1037132_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_001283153.1\|1041011_1041287_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_175058445.1\|1042239_1042983_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	4.4e-128	96.8
WP_175058751.1\|1043043_1043430_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	1.8e-61	96.1
WP_001161009.1\|1043438_1043768_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000447253.1\|1046803_1047133_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_021560601.1\|1047845_1048589_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.4e-150	98.0

DBSCAN-SWA_4

4299632 : 4312815

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001374596.1\|4299632_4300394_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|4300387_4301014_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272592.1\|4301153_4302293_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|4302355_4303348_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104432.1\|4303441_4304806_-	GntP family transporter	NA	NA	NA	NA
WP_001357575.1\|4304894_4305671_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001279001.1\|4305675_4306314_-	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0
WP_175058726.1\|4306310_4307573_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.4e-134	61.2
WP_000847997.1\|4307569_4308478_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.5e-117	76.5
WP_001298167.1\|4308673_4309441_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
WP_001141304.1\|4309491_4310148_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	8.6e-51	46.6
WP_000103862.1\|4310253_4312815_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.2e-31	20.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR782233

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection