CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR782267	Acinetobacter sp. Marseille-Q1620 chromosome contig00001	5 crisprs	cas3,csa3,WYL,cas3f,cas8f,cas5f,cas7f,cas6f,cas1,DEDDh	0	28	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR782267_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782267_1

320100-320847

Orphan

Consensus_repeat	Method
GTTCACCATCGAGTAGATGGTTTAGAAG	PILER-CR
GTTCACCATCGTGTAGATGGTTTAGAAG	CRISPRCasFinder
GTTCACCATCGAGTAGATGGTTTAGAAG	CRT

12 spacers

The CRISPR arrays of NZ_LR782267_1

>merge|NZ_LR782267|1|320100-320847|PILER-CR,CRISPRCasFinder,CRT
GTTCACCATCGAGTAGATGGTTTAGAAGTACAAATACAAATGCTGGTGTTGTTTCTAGTCGTTCACCATCGAGTAGATGGTTTAGAAGTGTATCTGATAAGTCTGGTGAAACCATCGGGAGTTCACCATCGAGTAGATGGTTTAGAAGAAGCCGACACGCATCGAGTGGATTTGCTAACTGTTCACCATCGAGTAGATGGTTTAGAAGTGATGGGTATCAAAAGTTTCTCAACGTCGAGTGTTCACCATCGAGTAGATGGTTTAGAAGTATAGTTTAACAGTTCCAGCTTCGGAAATATCGTTCACCATCGAGTAGATGGTTTAGAAGTATAGTCAAGGGTAAGCAACATCCTGCTAGAAGTTCACCATCGAGTAGATGGTTTAGAAGTAACGTAGCATTATCTCCAAGTGGTATTGATGGTTCACCATCGAGTAGATGGTTTAGAAGACCAAGTCCCCTCAAATTCATCATCTTTATTCGTTCACCATCGAGTAGATGGTTTAGAAGATGCAGACCAACCACGATTACACGACATAAGTGTTCACCATCGAGTAGATGGTTTAGAAGTCTTGTATCAATATCAGCACCACAGAAAGGGCGTTCACCATCGTGTAGATGGTTTAGAAGAATCCAGTTGCAAAATATTTAGTCTTGTTCGAGTTCACCATCGTGTAGATGGTTTAGAAGTGCAATGGATATTGTGCTTGAGATTTATTCAGGTTCACCATTGTATAGTGATTTATTAAA

>NZ_LR782267|1|1|320100-320787|PILER-CR
GTTCACCATCGAGTAGATGGTTTAGAAG	TACAAATACAAATGCTGGTGTTGTTTCTAGTC
GTTCACCATCGAGTAGATGGTTTAGAAG	TGTATCTGATAAGTCTGGTGAAACCATCGGGA
GTTCACCATCGAGTAGATGGTTTAGAAG	AAGCCGACACGCATCGAGTGGATTTGCTAACT
GTTCACCATCGAGTAGATGGTTTAGAAG	TGATGGGTATCAAAAGTTTCTCAACGTCGAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTTTAACAGTTCCAGCTTCGGAAATATC
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTCAAGGGTAAGCAACATCCTGCTAGAA
GTTCACCATCGAGTAGATGGTTTAGAAG	TAACGTAGCATTATCTCCAAGTGGTATTGATG
GTTCACCATCGAGTAGATGGTTTAGAAG	ACCAAGTCCCCTCAAATTCATCATCTTTATTC
GTTCACCATCGAGTAGATGGTTTAGAAG	ATGCAGACCAACCACGATTACACGACATAAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TCTTGTATCAATATCAGCACCACAGAAAGGGC
GTTCACCATCGTGTAGATGGTTTAGAAG	AATCCAGTTGCAAAATATTTAGTCTTGTTCGA
GTTCACCATCGTGTAGATGGTTTAGAAG

>NZ_LR782267|1|1|320100-320787|CRISPRCasFinder
GTTCACCATCGAGTAGATGGTTTAGAAG	TACAAATACAAATGCTGGTGTTGTTTCTAGTC
GTTCACCATCGAGTAGATGGTTTAGAAG	TGTATCTGATAAGTCTGGTGAAACCATCGGGA
GTTCACCATCGAGTAGATGGTTTAGAAG	AAGCCGACACGCATCGAGTGGATTTGCTAACT
GTTCACCATCGAGTAGATGGTTTAGAAG	TGATGGGTATCAAAAGTTTCTCAACGTCGAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTTTAACAGTTCCAGCTTCGGAAATATC
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTCAAGGGTAAGCAACATCCTGCTAGAA
GTTCACCATCGAGTAGATGGTTTAGAAG	TAACGTAGCATTATCTCCAAGTGGTATTGATG
GTTCACCATCGAGTAGATGGTTTAGAAG	ACCAAGTCCCCTCAAATTCATCATCTTTATTC
GTTCACCATCGAGTAGATGGTTTAGAAG	ATGCAGACCAACCACGATTACACGACATAAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TCTTGTATCAATATCAGCACCACAGAAAGGGC
GTTCACCATCGTGTAGATGGTTTAGAAG	AATCCAGTTGCAAAATATTTAGTCTTGTTCGA
GTTCACCATCGTGTAGATGGTTTAGAAG

>NZ_LR782267|1|1|320100-320847|CRT
GTTCACCATCGAGTAGATGGTTTAGAAG	TACAAATACAAATGCTGGTGTTGTTTCTAGTC
GTTCACCATCGAGTAGATGGTTTAGAAG	TGTATCTGATAAGTCTGGTGAAACCATCGGGA
GTTCACCATCGAGTAGATGGTTTAGAAG	AAGCCGACACGCATCGAGTGGATTTGCTAACT
GTTCACCATCGAGTAGATGGTTTAGAAG	TGATGGGTATCAAAAGTTTCTCAACGTCGAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTTTAACAGTTCCAGCTTCGGAAATATC
GTTCACCATCGAGTAGATGGTTTAGAAG	TATAGTCAAGGGTAAGCAACATCCTGCTAGAA
GTTCACCATCGAGTAGATGGTTTAGAAG	TAACGTAGCATTATCTCCAAGTGGTATTGATG
GTTCACCATCGAGTAGATGGTTTAGAAG	ACCAAGTCCCCTCAAATTCATCATCTTTATTC
GTTCACCATCGAGTAGATGGTTTAGAAG	ATGCAGACCAACCACGATTACACGACATAAGT
GTTCACCATCGAGTAGATGGTTTAGAAG	TCTTGTATCAATATCAGCACCACAGAAAGGGC
GTTCACCATCGTGTAGATGGTTTAGAAG	AATCCAGTTGCAAAATATTTAGTCTTGTTCGA
GTTCACCATCGTGTAGATGGTTTAGAAG	TGCAATGGATATTGTGCTTGAGATTTATTCAG
GTTCACCATTGTATAGTGATTTATTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782267.1\|WP_174505369.1\|316712_317450_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_LR782267.1\|WP_174505365.1\|311127_312138_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174505373.1\|327725_328679_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612
NZ_LR782267.1\|WP_174505372.1\|325424_326465_-\|phenylacetaldoxime-dehydratase-family-protein	unknown	unknown	gnl\|CDD\|372736
NZ_LR782267.1\|WP_174505371.1\|322568_324650_+\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NZ_LR782267.1\|WP_121973710.1\|321777_322452_+\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	unknown	unknown	gnl\|CDD\|234603
NZ_LR782267.1\|WP_174505374.1\|329620_330067_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR782267.1\|WP_121973709.1\|320886_321699_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_LR782267.1\|WP_174505366.1\|312163_313156_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_LR782267.1\|WP_174505363.1\|306674_308756_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|184104
NZ_LR782267.1\|WP_121973705.1\|315495_316056_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_LR782267.1\|WP_174505364.1\|309093_311112_+\|ligand-gated-channel-protein	unknown	unknown	gnl\|CDD\|184104
NZ_LR782267.1\|WP_174505375.1\|331247_332861_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|180120
NZ_LR782267.1\|WP_121973703.1\|313476_314091_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239473
NZ_LR782267.1\|WP_174505367.1\|314130_315342_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_LR782267.1\|WP_171334515.1\|330217_331126_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_LR782267.1\|WP_174505368.1\|316057_316702_-\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_LR782267.1\|WP_174505370.1\|317446_319957_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|225669
NZ_LR782267.1\|WP_121973713.1\|326467_327481_-\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143588
NZ_LR782267.1\|WP_121975149.1\|329165_329549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183271

Protein	Function_ID	Function_description	E-value
NZ_LR782267.1\|WP_174505369.1\|316712_317450_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.24913e-95
NZ_LR782267.1\|WP_174505370.1\|317446_319957_+\|FtsX-like-permease-family-protein	gnl\|CDD\|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	1.82424e-161
NZ_LR782267.1\|WP_174505373.1\|327725_328679_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	1.8071e-27
NZ_LR782267.1\|WP_174505372.1\|325424_326465_-\|phenylacetaldoxime-dehydratase-family-protein	gnl\|CDD\|372736	pfam13816, Dehydratase_hem, Haem-containing dehydratase. This family includes aldoxime dehydratase, EC:4.99.1.5. This is a haem-containing enzyme, which catalyzes the dehydration of aldoximes to their corresponding nitrile. It also includes phenylacetaldoxime dehydratase, EC:4.99.1.7. This haem-containing enzyme catalyzes the dehydration of Z-phenylacetaldoxime to phenylacetonitrile. The enzyme forms an elliptic beta barrel, composed of eight beta-strands, flanked by alpha-helices.	3.75023e-112
NZ_LR782267.1\|WP_174505371.1\|322568_324650_+\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NZ_LR782267.1\|WP_174505374.1\|329620_330067_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.55034e-14
NZ_LR782267.1\|WP_121973709.1\|320886_321699_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	1.5097e-28
NZ_LR782267.1\|WP_174505366.1\|312163_313156_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.34352e-26
NZ_LR782267.1\|WP_174505363.1\|306674_308756_+\|TonB-dependent-receptor	gnl\|CDD\|184104	PRK13513, PRK13513, ligand-gated channel protein.	0
NZ_LR782267.1\|WP_121973705.1\|315495_316056_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	2.07019e-12
NZ_LR782267.1\|WP_174505364.1\|309093_311112_+\|ligand-gated-channel-protein	gnl\|CDD\|184104	PRK13513, PRK13513, ligand-gated channel protein.	0
NZ_LR782267.1\|WP_174505375.1\|331247_332861_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|180120	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional.	0
NZ_LR782267.1\|WP_121973703.1\|313476_314091_+\|carbonic-anhydrase	gnl\|CDD\|239473	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	2.99085e-75
NZ_LR782267.1\|WP_174505367.1\|314130_315342_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.25129e-17
NZ_LR782267.1\|WP_171334515.1\|330217_331126_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_LR782267.1\|WP_174505368.1\|316057_316702_-\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	1.03435e-91
NZ_LR782267.1\|WP_121973710.1\|321777_322452_+\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	gnl\|CDD\|234603	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional.	6.41449e-103
NZ_LR782267.1\|WP_121973713.1\|326467_327481_-\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143588	cd07564, nitrilases_CHs, Nitrilases, cyanide hydratase (CH)s, and similar proteins (class 1 nitrilases). Nitrilases (nitrile aminohydrolases, EC:3.5.5.1) hydrolyze nitriles (RCN) to ammonia and the corresponding carboxylic acid. Most nitrilases prefer aromatic nitriles, some prefer arylacetonitriles and others aliphatic nitriles. This group includes the nitrilase cyanide dihydratase (CDH), which hydrolyzes inorganic cyanide (HCN) to produce formate. It also includes cyanide hydratase (CH), which hydrolyzes HCN to formamide. This group includes four Arabidopsis thaliana nitrilases (Ath)NIT1-4. AthNIT1-3 have a strong substrate preference for phenylpropionitrile (PPN) and other nitriles which may originate from the breakdown of glucosinolates. The product of PPN hydrolysis, phenylacetic acid has auxin activity. AthNIT1-3 can also convert indoacetonitrile to indole-3-acetic acid (IAA, auxin), but with a lower affinity and velocity. From their expression patterns, it has been speculated that NIT3 may produce IAA during the early stages of germination, and that NIT3 may produce IAA during embryo development and maturation. AthNIT4 has a strong substrate specificity for the nitrile, beta-cyano-L-alanine (Ala(CN)), an intermediate of cyanide detoxification. AthNIT4 has both a nitrilase activity and a nitrile hydratase (NHase) activity, which generate aspartic acid and asparagine respectively from Ala(CN). NHase catalyzes the hydration of nitriles to their corresponding amides. This subgroup belongs to a larger nitrilase superfamily comprised of belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 1.	2.85248e-164
NZ_LR782267.1\|WP_121975149.1\|329165_329549_+\|hypothetical-protein	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	0.00918623

>NZ_LR782267.1|WP_174505370.1|317446_319957_+|FtsX-like-permease-family-protein
MMGLFKPLLRQSFQSTGIYLLIIALSLAISATTALKFSNDQVQHAVELQAAKMLAADLVLSDQQPIQQNWKIQAQRLNLKQSEVTMFGSMAHTNDQFVMVNVKAIDSVFPLRGELTVQPMAKQIKSGEVWLSQRTMDLLHVNIGDDIKIADGTFKVAAKIQHDSNQEIGFSAFSPTVIISHQDIAKTNAIQTGSRIEYRLLLSGSPKQVQAYKQLFQQFENKEKNKNQLQPQTQYSESSTEQAIGAASTLKLRDAGDANTRLMKPIQNLDTFLKLANILTILLCGIAIALTSQRYVQQNQDHIALIRCLGAKRSQILNAYVLLLLIVVGISILIGSVSGLVLGYALLELMLGLIPNLELQFSLFDLLLGPLPIAIFTSAIVLLGFVLPSLWALLNTPPIRVIRQQEKNVMSLATMIGIGIISLIIFSFVLTSDLRLTALVITAIILLSVLLYFLVWGILKLFKALKNQISSYVRTPSQTALQVTALALGLSLITVLAVLRTDLLERWQQQLPAGTPNQFVYGLPPFELQQFKQQLKQHQWKSTALYPNIRGRLVAKNGQAFPNEIIEKNNSLKRELNLTQTEHYPEDNKILAGNMVLKNVGDVSVESKLAEELGINVGDKLTFSLPEGQLIGNVVNIRSVEWQSFSPNFFFIFAPNTLDENAGSYLGSFYIPANEKKQLVSLVQQFPNTVFIDVSLILDEVARLINVLVQIVTVLAILVSLSGFLVLIACINLLMDERKREVALLRSFGSSKAKLKNMMSMEIGFIGLMAGIVSCFFAEVISAIASYKMELIIQVHWEIWIILPVVMTVLCMLIGRYRLSYLSEIPPLQSLREINQ
>NZ_LR782267.1|WP_174505369.1|316712_317450_+|ABC-transporter-ATP-binding-protein
MVQLASTTSIMPQAIISAHGLTQHIQLHNKNLTILSGLDLEIFAGEQVAITGRSGSGKSTLLGILATLDQASAGQLYVCGEPIHELNEEQRANVRLKHIGFVFQSFQLLPHLSALENVMLPLRLHRDFHYKEAEHKALKLLEQVGLADQAGQTPKVLSGGEQQRVAIARALITEPDIVFADEPTGNLDGHTATEIEQLLFDLNQALGTTLVLVTHDPKLAAQCQRHFELVDGQLIEHSSKQGVRA
>NZ_LR782267.1|WP_174505368.1|316057_316702_-|arylesterase
MQTMKIVNIRILRNHLVRLMIIALSLSPLTVFAKTIMILGDSISAGFGINPDQAWVNLLQQRLNQQYPKQHRVVNASVSGETTSGALARLPKLLQTHKPDIVVIELGGNDGLRGQPPQMIQKNLENLVKLSQKADAKVILFGMKIPPNYGTAYSTAFESNYKIISQKYNIKLLPFFMQGIAGNKNFMQQDLIHPNAQAQKILLDNAYPYIKSAL
>NZ_LR782267.1|WP_121973705.1|315495_316056_+|TetR/AcrR-family-transcriptional-regulator
MTKNVTGLRPGGRSARIQEAVHCAVLALQQELEQSQITVPMIAMRAGVTPSTIYRRWGDIQQLFSDVAFSKLQPDSLPRDLGSFREDLYAWVEQYYEEYSSSVGRALLKDVLAAQDTQTAERCYDLVSQQLDVIRERAIQRNENFIENRLIIEIVVAPLIYMILFSSQQLDLDFVHKLLIRLFEDQ
>NZ_LR782267.1|WP_174505367.1|314130_315342_-|MFS-transporter
MNNSSLKHPSAGFRLSPKSALILHTLTLMTFMAASSAPTPLYRLYQQIWHFSPVILTLIFAIYAFSLLASLLVIGSLSDYIGRKPVILLALVLQISSMVLFLYASAPVMLFIARALQGVATGLAVSAIGASLLDLSKEHGSLINSICPMIGMAFGALIACTILQFSTFPLQLIFEVLIFALFIELCLCCIAPETAKKRVGAWASLKPKMAIPVQARHALLKVSPVNIALWMVSGFYLSLMPSLLAKAFNTHSAWLSGLSFIALTISGAIAIFLLRQSKTSIILLTGTITIMIGALIILLGVNLTQATLLFSGSIIAGIGFGSGFMGAIRSVMPLAQPEQRAGLMAAFFVESYLAFSIPAIIAGYLVNKIGLISSANIYGSLIVFLALLALCLVLRDQRVPAEQ
>NZ_LR782267.1|WP_121973703.1|313476_314091_+|carbonic-anhydrase
MLTAQEALDRLKQGNQRFVNGETQHIKLLTHQQRAEMAESQDPFAIVLGCSDSRVPAEMVFDQGLGDLFVIRVAGNIVAPSQVGSVEFAAESFHCPVVVVLGHTHCGAISSTIAALRNPDQPPSANLMSIVNRVRPSVEILMQTELKDDLTKLSMHAVKSNVFASVNQLRHGSAVLENLIAKGKLKVVGAEYSLETGEVTFYDF
>NZ_LR782267.1|WP_174505366.1|312163_313156_-|alpha/beta-hydrolase
MTRTLSHKMAHFCLAITLGLTALSFNNMANATEERIDYLKIQQEERAWAGLTSKTLRVGDIAWTYSEGGNIKNPTILLLHGLGSNRDSWNKIAHDLTPYFHVVIPDLPSSNKKLFPAEYDLSLNNVTEQLRRFIETASIQNNLNIAGHSIGGSLALFYASKYPEDTKSLLLMSIGGPFNNSNTVYLKNPVYLKQLIVSKPGDYDYVMKTMMSNPPFIPGVIKKEQEKALIAESEENSKVINEISNINQYYNKTAFNKMLANTQAPTLIIWGKQDKIANVEIATELKSKLKKAEMPIVLEHVGHVPVLEADQLIIQNYLPFLRKVNNLPTP
>NZ_LR782267.1|WP_174505365.1|311127_312138_-|hypothetical-protein
MKNPLIEQLIEAHLAFLDQEFSEPETIQTEFINFYHWFRQKRLQELWSFEDINHLIQKQILATPASNFLIEQIAEHIRFALVHPVNDETKVEDIIPVTTIDKIALYISSKSGHRKALIKRIVNNPSFSDTLTQLIHHSIQDYIDNSVMNKKVPGVGRFMKMGKSVLESVTDTNLDDTVKHYLQKNIIKISQLSENILNQNFDDNKLYHFQANLWHKIKAVPLSTIKSYIEVNDLPKTVALGHEIWEHLRQTDYLKKQIHDGVYAWYVRNQERNFDLIFRDINIDEALIQNELQKLLEPIIQKMVSSGHLRTRARHYLEKFYYSEQALQILNIEKGA
>NZ_LR782267.1|WP_174505364.1|309093_311112_+|ligand-gated-channel-protein
MNSPFKRSLLASVVFFSFSGYIFAEEQLIDSSVQNETVNTLKTMVVTASGFEQNVKSTAATISVLTQEQINKKAYRDITDALKDVPGVVVTGGGSSSDISIRGMGSAYTVIMVDGKKVNSRSVRPNSDNSGIEQGWLPGIGAIERIEVIRGPMSGLYGSDAIGGVINIITKKVSDTWSGSVKADTTLQEDHNSGNIYQANAFISGPLIKNLLGFKANGLFSKREEDQIIGGYNLQKMREGGATLSLTPNDQHTVDFDYQRSIQNRNGTVGKTINPVDSRGRKAKDSYANYNRTEYSVSHRGEIGVLKTNSYIQREENDNPTRNMNAVNTTFNTINQLNLGGHDLSFGGMYLKEKLDDLGNQIKINGQRVSHLDRYSWAVFAEDNWKIVDPFVLTTSLRLDKDEKFGDHWSPKVYGVWTLNDEWIIKGGISTGYKTPALRATVAEWGQVTGGGRSNGMIVGNPNLKPEKSVNYEVSFIWDNNDDLNASLTLFNSEFKDKITEIRTCQSNSGEGKCPWLGSNYDFVSQRENVDKANMRGAEAEFGWKISPNLVMSTNYTYTDTEQKSGINKGKPLNEMPKHMFNTTVDWDINDQISTWSRLNVRSKTSDYLSRVSMATGKPAYAMIDVGLNYKPTQNIQIGAGIYNLFDKKIDYSTYNYILDGRRYNLSVMYRF
>NZ_LR782267.1|WP_174505363.1|306674_308756_+|TonB-dependent-receptor
MHIKIAYSVLSASILTVLMSSAYATETSIKTVTSKSAVDEAVKLDTIVVTAAGYEQDVTKAPAAMTVITREELDKREYNDITDVLRNTPGVVISGAGSAQTISIRGMGSNYTLFLVNGKRQFSKDVNPNGDDNGFEKNILPPMAAIERIEVIRGPASTLYGTDAMGGVINIITKKVTDEWTGTVELGTVVQDQGDSGDIKNGSVYLAGPLIPNKLGLQLGLNKQKRDEDSYAGGFRGTERESLNTRLTYILNDNHDFEFDANFLKQESETTIGKTVELAKPGEKQTQGSNGRNYRNVYSITHNGRYSDTLKSTSYIQLEQSKNPDRSNGTTSGIELETWIANSQWDWDINNHKLILGTYFKNEELTDRATNQNDAMPITELERWAFAIFAEDTWSITDKFDLTTGVRYDHDENYDGNFSPRVYGVYNLNDAWTFKGGVSTGYKQPDLKESNSDVHSVTGKGSAFIIGNDNLDPEKSITYELATAWRGERSKATLTAYYTEFKDRITEDRICQSEGGVNGNSSTWKCPDPFGRLDADGNIKMWNFYGSRFNIDKATMQGIEATYDIELGEGVNLGANYTYTDTEIKSGAYKGQPLNQMPEHMFNVTVDYDIYDALNVWSRLHYRSETSPYLGRSSMSKPNPGYTFLDVGFNYQFTNNLKGKFGIYNILDEKAEDVNGDQLLDGRRYGISFVANF
>NZ_LR782267.1|WP_121973709.1|320886_321699_-|rhomboid-family-intramembrane-serine-protease
MAEYNPPPVYTQSSFKIGKITALFIAINVGLFVLEIFSGVNISNPQIVDALRWGADYAPLTYLEEPYRIFSSMFFHFGLIHLMMNMWALYVFGNIAEVLFGRLYFFGLYLLAGISGSLLSGYIDIQHSYELLQNFSPDLLPKVGAGASGAVMGIGGALTALSFFSPLPHQRLLLDKKSLITIMVINLAFGMLASGINNAAHVGGMIMGAVLAIAWYYVERKKMGMLSRIIILIAAIIATYFIYLYLMKLVQPIAPVWQEIWVQMKDQLGM
>NZ_LR782267.1|WP_121973710.1|321777_322452_+|monofunctional-biosynthetic-peptidoglycan-transglycosylase
MKAFIVRILLIIVSLFLIVQLWIFGSLVWWRTNPVETTMLMRVTYWSDQVAIKHEWKAYDDISDNFKHAVVAAEDAKFMNHHGFDWDGIEDAVHRNLKNDKVVAGGSTISQQLAKNLFLFNKRSFVRKGQEAIATLMMERMWSKRRILEVYMNSVEYGDHIFGIEAASQYYFHKSSRSLTRSQAAFLAAILPDPKFYQDHRNNRKLQYRMRLIMKYMRSTHIPD
>NZ_LR782267.1|WP_174505371.1|322568_324650_+|polyphosphate-kinase-1
MNTAVTTTPAEYTYNDRYINRELSILDFHLRVLEQAVDPLHPLLERMNFLLIFSRNMDEFFEIRVAGVMEQLTLGNESRSPDGLTPKQVLESISKTAHAAVERQYRILNDEIFPKLREEDICFLRRGELTPAQSVWVKKYFQEQVAPVLTPISLDPAHPFPRLVNKSLNFIVTLEGKDAFGRQIDLAVVPAPRSLPRVVRLPDELTGGKEHFVMLSAIIHEHVSDLFPGMTATGCYQFRVTRNADLALNEDVEDLAKALKGELSSRRFGRAVRLEVTENCPQHIYEYLLDEFDLDEEQLYKVDGPVNLARLFSNFKRPHLRYDSYTPAIPKVFKKSESIFSAMQKQDILLHHPFESFAPVINLLREAARDPQVLAIKQTLYRSGADSEIVQVLAEAARNGKEVTAVIELRARFDEESNIAVANVLQEAGAVVVYGIVGYKTHAKMILVVRRENNKLVRYVHLGTGNYHATNARIYTDYGLMTTDKELCEDVHRIFQELTGMGKMAKLKKLLHAPFTLHAQLLNFIEEEIENAKAGKPAQIIVKVNALTEVQLINKLYEASQAGVQIDLIIRSICCLRPGLPNLSENIRVRSIVGRFLEHTRVYYFSNAGNPRIYCSSADWMDRNLFNRVEVCFPVEDPALKKRIYQQGLVNYIKDNTQAWLLQGNGTWVRAEPKDGEESHNAQRTLIDIFSNQ
>NZ_LR782267.1|WP_174505372.1|325424_326465_-|phenylacetaldoxime-dehydratase-family-protein
MESAIPESLRTEPTKARTMNAGYVPPYPAWTTRFAADVKQVVMAYFGIQSKQKLNIDSLEPFTYRFIGDDAPEYWVPAYEQDAKGYHNLITIGYWADVTTFHRWAKQSSFFEWWHDNERETDNIGYFLEIYYPEVGQFETIFSVQNAPEGIAHLAVSMSDEIQEHGYYGSMRDRLPCAQIDDLNHEQSSVGSCTSQSHTRIKLQGRKNLCLIRSGQDWSYTQDKERRLYLAQVEPVLQKGMLFLRDEGSAEGCINCRYMTVLDKDTGQPTERTFGLAQFIDLEHLEAWAKSHPTHVEIFGQFMNYVQTMNYQINLRLFHEVIVVPEQSQYFEYINCHAQTGLLKYK
>NZ_LR782267.1|WP_121973713.1|326467_327481_-|carbon-nitrogen-hydrolase-family-protein
MKKLIKVACVQAAPVFLDLQATVDKTIELIAEASQKGAELIAFPETWIPGYPWFLWLDSPAANMPLVYQYHINSLDLNSIQAQQIADAARQNHIHVVLGFSERDHGSLYISQWIIDHHGETIGTRRKLKATHVERTLFGESDGSSIKTFETELGTIGALCCWEHLQPLTRFAMYSQHEQIHIAAWPSFSLYKDATAALGAEVNTAASRLYAAEGQCFVLAPCAIVSQDMYDFLCTDETKKQLLHTGGGHARIYGPDGRDLVEPLPETQEGLLIATLDLDNIIFAKAAADPVGHYSRPDVFQLLFNIHEMPKVIEKNITNTKTDIESEFSLFTELKGD
>NZ_LR782267.1|WP_174505373.1|327725_328679_+|helix-turn-helix-domain-containing-protein
MLNFDTRTVPLNQQHDYWQEAISQVFVPLNCNLPTENPFLGVLETKQWTNLRLVAVKGQTQHVERNWHKIRKDTHDQILMSILLSGNMGINQNGRETMIQQGQFSFYDAYQPYDLHLNGSFDQLVLMIPRSIFQDRFGRIEILSARSFGKDHPLQRLVLNFSESLLSLPHELSLGLQDTLLDQYLDLLGCIVADTGQNQIEKPSKSTTLLQIKNLILQQISNSDLSIHDVAYHLQISTRYVSKLFQQEHTTFGRYLLENRLKQCKKLLCHPSFYPRSISELAFQVGFNDMSYFSREFKKYFGMSPKEMKKEHNLSKF
>NZ_LR782267.1|WP_121975149.1|329165_329549_+|hypothetical-protein
MKRIFILLFLTPFLVSCAASPLGDAVNAIGGQRAETMNDIVAAWVGASEQELVSKWGPPRNSYTLSNGNRVISYNYEYSVGMSDFFCERKFLVEHGTITKWGIRGKCQVNGKVVLIPKSTPIPQPTM
>NZ_LR782267.1|WP_174505374.1|329620_330067_-|GNAT-family-N-acetyltransferase
MSIKIIPLSDISFDQWLPLWQSYLTFYKSSLSEEQISLSWKRITNPAQKDMFGFAIKINENIVGFVHLISHMSMWTEKPYCYLQDLFIDENYRNQGLARKLIEHTYQVCKGGFDRVYWLTQADNHTAQLLYDRIADKTGFIQYKHSLI
>NZ_LR782267.1|WP_171334515.1|330217_331126_+|sulfate-adenylyltransferase-subunit-CysD
MTEERLTHLKQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAMKAFYPAKLPFPLLHVDTGWKFKDMIKFRDEMAKNYDLDIIVHQNKEGVDANVNPFDYGSSKYTDIMKTQGLKQALDKYQFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNLYNGKVNKGESIRVFPLSNWTELDIWQYIFLEQIPIVPLYYAAERPVVERSGTLIMVDDERMRLHEGEVPQMKSVRFRTLGCYPLTGAVESTASTLPEIIQEMLLATSSERQGRMIDHDEAGSMEKKKQEGYF
>NZ_LR782267.1|WP_174505375.1|331247_332861_+|sulfate-adenylyltransferase-subunit-CysN
MSHQSELISQDILAYLKQHEQKDLLRFLTCGNVDDGKSTLIGRLLYDSKLIYEDQLQAVTRDSKKVGTTGDAPDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTADLAIILIDARYGVQTQTRRHTFIASLLGIRNIVVAINKMDLVEFSETRFDEIQAEYDNFVSQLGDRRPENILFVPISALNGDNVVNKSSNTPWYNGKTLMNILETVEITRDTSKHEFRFPVQYVNRPNLDFRGFAGTIALGEVRVGDEIIALPSGKKSTVKEIVTYDGNLDHAIAGQAVTLTLNDEIDISRGNMLVKAGEQPLISRRVDASVVWMNDHPLVVGKLYNIKIGTQTIPAKVTKINYRTNVNTLEHMHVKQLDLNAIANVVVEFDAPVVFDRYQDSRYTGSFIFIDRLSNVTVGAGMVESAIEWSADSTPVTAEDRAARLGQKPAAVQVSSVAIEQAQKIESLLIQQGIVAIAKAGLSTEQVALVRETGVVVLTTLEQGTDVSFLTENVEELAEQVVKLVRL

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Crispr_ID: NZ_LR782267_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782267_2

361289-361368

Orphan

Consensus_repeat	Method
GAGGATAAGAAAAACAACGTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR782267_2

>merge|NZ_LR782267|2|361289-361368|CRISPRCasFinder
GAGGATAAGAAAAACAACGTTTTTCCCGAGCGCAAGGCGAAGGCTGTGCCTGAGTAAGAGGATAAGAAAAACAATGTTTT

>NZ_LR782267|2|2|361289-361368|CRISPRCasFinder
GAGGATAAGAAAAACAACGTTTT	TCCCGAGCGCAAGGCGAAGGCTGTGCCTGAGTAA
GAGGATAAGAAAAACAATGTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782267.1\|WP_174505395.1\|367707_368439_+\|CDGSH-iron-sulfur-domain-containing-protein	unknown	unknown	gnl\|CDD\|378163
NZ_LR782267.1\|WP_174505394.1\|366118_366652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174505388.1\|356576_357269_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|178807
NZ_LR782267.1\|WP_174505392.1\|362647_363205_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_LR782267.1\|WP_121972884.1\|347053_350233_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_LR782267.1\|WP_121972890.1\|356111_356369_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_LR782267.1\|WP_174505385.1\|351536_352148_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_LR782267.1\|WP_174505387.1\|354375_355353_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|182813
NZ_LR782267.1\|WP_174505390.1\|361524_362016_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223297
NZ_LR782267.1\|WP_174505391.1\|362151_362529_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_LR782267.1\|WP_121972885.1\|350245_351511_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_LR782267.1\|WP_174505393.1\|364930_366115_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341487
NZ_LR782267.1\|WP_121972898.1\|363279_364665_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_LR782267.1\|WP_121972889.1\|355781_356093_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_LR782267.1\|WP_174505389.1\|357669_358458_+\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NZ_LR782267.1\|WP_121972901.1\|366729_367389_-\|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl\|CDD\|237681
NZ_LR782267.1\|WP_121972893.1\|358586_359858_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_LR782267.1\|WP_121972903.1\|368532_368820_-\|DUF493-domain-containing-protein	unknown	unknown	gnl\|CDD\|377327
NZ_LR782267.1\|WP_121972904.1\|368926_370816_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_LR782267.1\|WP_174505386.1\|352304_354359_-\|site-specific-recombinase	unknown	unknown	gnl\|CDD\|378408

Protein	Function_ID	Function_description	E-value
NZ_LR782267.1\|WP_174505395.1\|367707_368439_+\|CDGSH-iron-sulfur-domain-containing-protein	gnl\|CDD\|378163	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type. The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm.	4.68229e-18
NZ_LR782267.1\|WP_121972903.1\|368532_368820_-\|DUF493-domain-containing-protein	gnl\|CDD\|377327	pfam04359, DUF493, Protein of unknown function (DUF493). This domain is likely to act in a regulatory capacity like pfam01842 domains. This domain has a remarkable property in that the C-terminal residue of every protein in the family lies up in the alignment. This suggests that the C-terminal residue plays some important functional role (Bateman A pers obs).	4.14528e-30
NZ_LR782267.1\|WP_174505388.1\|356576_357269_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|178807	PRK00031, lolA, outer membrane lipoprotein chaperone LolA.	1.09382e-57
NZ_LR782267.1\|WP_174505392.1\|362647_363205_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.16047e-18
NZ_LR782267.1\|WP_121972884.1\|347053_350233_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_LR782267.1\|WP_121972890.1\|356111_356369_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	3.24953e-52
NZ_LR782267.1\|WP_174505385.1\|351536_352148_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	2.7732e-34
NZ_LR782267.1\|WP_174505387.1\|354375_355353_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|182813	PRK10888, PRK10888, octaprenyl diphosphate synthase; Provisional.	1.682e-102
NZ_LR782267.1\|WP_174505390.1\|361524_362016_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	7.48576e-77
NZ_LR782267.1\|WP_174505391.1\|362151_362529_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	2.08177e-30
NZ_LR782267.1\|WP_121972885.1\|350245_351511_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	2.87277e-107
NZ_LR782267.1\|WP_174505393.1\|364930_366115_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341487	cd14865, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) which catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. It is distinct from other alcohol dehydrogenases which contains different protein domains. Proteins of this family have not been characterized.	0
NZ_LR782267.1\|WP_121972898.1\|363279_364665_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	2.58888e-41
NZ_LR782267.1\|WP_121972889.1\|355781_356093_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	1.81538e-55
NZ_LR782267.1\|WP_174505389.1\|357669_358458_+\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	1.42735e-09
NZ_LR782267.1\|WP_121972901.1\|366729_367389_-\|lipoyl(octanoyl)-transferase-LipB	gnl\|CDD\|237681	PRK14342, PRK14342, lipoyl(octanoyl) transferase LipB.	3.31661e-128
NZ_LR782267.1\|WP_121972893.1\|358586_359858_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_LR782267.1\|WP_121972904.1\|368926_370816_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_LR782267.1\|WP_174505386.1\|352304_354359_-\|site-specific-recombinase	gnl\|CDD\|378408	pfam10136, SpecificRecomb, Site-specific recombinase. Members of this family of bacterial proteins are found in various putative site-specific recombinase transmembrane proteins.	0

>NZ_LR782267.1|WP_121972893.1|358586_359858_+|serine--tRNA-ligase
MIDPKLLRNNIEAVNLALAKRGVQLNVDEWASLEARRKEIQSKTENLQAERNSGAKQVGQIKKAGGDASEIMARMAAIGDEIKAAEAELADLQAEIEAKSLSIPNLPHESVPEGKDESDNVEILRWGTPRQFDFEIKDHTDLGEMMGGLEFETATKLTGTRFSVLKGPLARLQRALTQFMLDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTNFVRDEIIDAERLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKAEDSMDALEALTGHAEGILQALGLPYRKIVLCGGDMGFGACKTYDLEVWVPSQNTYREISSCSNMWDFQARRMKARYRVDQKKTELVHTLNGSGLAVGRTLLAVMENYQRADGSIEVPEVLRPYMGGATYID
>NZ_LR782267.1|WP_174505389.1|357669_358458_+|DUF3298-domain-containing-protein
MTSQIKLQWLWAIPFCTAALLMGGCQEKPKAHTDETQKTSTAKQSDESVSVIQGKVQRIKLDKNQFCDDQGCTQYDLQTVKTNVPWIDNYFLERIRKAVPNAFTAETKDVKVDTHQQGVNQSSIYVRYISQNNNLATFAIQSYEYAAGAAHGMHHQEFVTFDLTTHKRLALSDILKPDVEAQLVQQLYEANSLWLEQHSITPDKLQLSDNYYYGVNGVVFVYPLYELASYAEGMPELKLPYSSAKDLIKPEYLPGLPQYASQ
>NZ_LR782267.1|WP_174505388.1|356576_357269_+|outer-membrane-lipoprotein-chaperone-LolA
MTMLRKTMGAITISAAMLAPAMSTTVFAATAASEQTATSNLVRQLSGIKSLSANFEQTTKLTSGKAPQKKGLTAQHMNQTFKGEMKVARPGKFYWQTTSPAKQTIVTSGKTVWIYDPDLGQAVRQSLDEQVANTPALLLSGNTQQIMKTYRITQPDAGKTYYTLYPKDKDGAFQSLTISFGANKAPSLMILQDSLGQTTYVRFNNVKVNPSIPASTFNFVPPKGTDIIDQ
>NZ_LR782267.1|WP_121972890.1|356111_356369_+|50S-ribosomal-protein-L27
MAHKKAGGSTRNGRDSNPKMLGVKVYGGQAVVAGNIIVRQRGTEFHAGANVGMGRDHTLFATADGVVKFEVKGQFGRRYVTVETA
>NZ_LR782267.1|WP_121972889.1|355781_356093_+|50S-ribosomal-protein-L21
MYAVIQSGGKQHRVVEGETLKVELLKAETGATITFDDVLMVVNGDNIQIGAPVVAGAKVTAEVVGHGRHDKIRIVKMRRRKHYRKQQGHRQWFTELKITGIAG
>NZ_LR782267.1|WP_174505387.1|354375_355353_-|polyprenyl-synthetase-family-protein
MTIDFKQDILAPVATDFAAMDKLINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAARACGETDLEQAQKLAAIIEMLHTATLVHDDVVDESGLRRGKPTANATWNNQTAVLVGDFLISRAFDLLVDLNNMVLLKDFSTGTCEIAEGEVLQLQAQHQPDTDEATYLSIIHGKTSRLFELATEGAAILAGKEQYREPLRVYAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALQKTVGEEHKIIRRSIATGGTSELDRVIQIVQSSGALDYCRQRAKEETETALNALNNLPESEYRQALYNLAQLALNRIQ
>NZ_LR782267.1|WP_174505386.1|352304_354359_-|site-specific-recombinase
MHINFHDLFTKMQEQLEHPQVIPDPTILIELVKRIRPVDSRNSNEIQQKIQALIQALLLAPTAAYHFQGYLLKLMNHYKQATLYADSGILSLDGFWNQLGQRLGAHFLPLLNDHTELKDLVGRVFFDKTDKYWLENIANEDWSQLFALLHQGQNFQQAKFGIKQEMVKAITVLSYRISGIGLYPEFINAQPEVTEYESPFLVQNREIVEFIENYKKLHQDDLKNTTTTHILDADQALVMIEQCRELVLKTRRAVKRIGVSLSLTYLLSLLEQCLDRIELLLNILVEENELRYQAMAELLTDLVSAHSSENSVRALLSANSELIALQVTENASKTGEHYVSTDKQGFFGMYKAAAGAGVIIAIMASLKILAARLVLAPLMHAFIYSMNYSLGFMLIHVLHFTVATKQPAMTAAALAATVQHRKGSKNAQIAELASLIVNIIRTQFIAILGNISIAIPIAALITFLWQSIMDEPLLNHMKADALLHSLNPFTSLAVPHAAIAGVCLFLSGLIAGYFDNMAVYRKIGPRLKAHARLKLLMGQERLNKFANYIERNLGALAGNFLFGIMLGSMGTLGFILGLPLDIRHIAFASANFIQGLMCTNSPDIGLIIISFLGVLLIGLTNLFVSFSLTVIVALRARQVRFEQWKPLAKLVMTHFFTRPLDFFWPPKQPVEIEENEHTQQKMRH
>NZ_LR782267.1|WP_174505385.1|351536_352148_-|phosphatase-PAP2-family-protein
MLYLLILLGCIGIGISSVGLFVPYIHQLDFSSVNWLSIHRSEFINPIAMGLSTLGGLPGTLLILTIWCLHQAWYKKYVNILFISAGIIGSATIGWILKFLVNRPRPETMYQMVKVYGASFPSAHSIYAMTVACLVIFIFYKHRKAKMIILLVSIWWLSMGVSRVYLGAHFPTDVLAGWSIGLIWIATLRLWISHRKFGKNNYF
>NZ_LR782267.1|WP_121972885.1|350245_351511_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MMSAKLWAPALTACALATSIALVGCSKDPKDAQQAADAQKMPPTEVGVIVAQPQSVEQTVELSGRTSAFQVSEVRPQTNGVILKRLFTEGSFVREGQPLYEIDPRTNNANLDSAKADLLNQQANLNALKVKTNRYRQLIGINAVSKQEYDDLVAQVKQGEAMVASAQAAVKNAQINLGYSTVRAPISGQSGRSNFTAGALVTASQADPLVTVQQLDPIYVDINQSSAELLRLRQQLSKGNIDRSNNTKVRLKLDDGSYYPIEGNLAFSDASVNQDTGTITLRAVFTNPNHLLLPGMYATAQIVQGVIPNAYLVPQIGVTRSPTGQASAMVVNAKGLAESRDIETVGTQGQNWIVTKGLNPGDKVIVDGIAKIKPGQQVSAKPYQPKAAAPQEGAKPAAQGNGAQPTQNAKPQTEQKATSHA
>NZ_LR782267.1|WP_121972884.1|347053_350233_-|efflux-RND-transporter-permease-subunit
MAHFFIHRPIFAWVIALVIMLAGILSLTNMPISQFPTIAPPKISISATYPGASADTVENTVTQVIEQQMNGLDGLRYISSQSSSNGMAAIDVNFNQGVDADIAQVQVQNKLQTAMASLPNDVQRQGVTIKKSGASFLQVVAFYSPNDSMTKGDITDYLNANIKDPLSRVSGVGEIQVFGGQYAMRIWLDPAKLNTYNLTPADVSAAIQAQNAQVAVGQLGGAPSVDGQVLNATVNAQSLLQTPEEFENIFLKNSNEGAQVRIRDVARVELGSDNYQFDSKYNGHPAGGIAIRLSTGANALDTAKNVEAALEKLRPSYPAGLKDEVAFDSTPFVKLSIENVVHTLIEAIFLVFLVMFLFLQNWRATIIPTMAVPVVVLGTFAVINMFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERIMDEEHSDPVSATEKSMDQISGALVGITSVLSAVFVPMAFFGGTTGVIYRQFSVTLVTAMVLSLFIALTFTPALCATLLKQHDPNKKPSNGIFARFFRWFNDKFEKTSQKYQNGVNRMTHHKLFSGVIYGIVIVVLLGVLKIMPTSFLPDEDQGVLFTLVQLPPNASLERTNKTMDSITNYFEQKEKDTVESVFTVSGFSFTGMGQNQGIAFVRLKDWKERTTADAKIGNIVQRAMALNGIVKDASMIYPLQLPAMPELGVSQGFDFMLKDNDGQGHEKLLAARNAILGMASQDKRLSGVRPNGMEDTPQYKITIDQAAAGAMGVSIADINSTMSIAWGGLYINDFIDRGRIKKVYLQSDSVSRMMPEDLNKWYVRNNKGTMVPFSAFASGKWTYGSPRLERYNGISSMNIQGATGAGASSGDAMLAMEEIMQKLPSMGLPGFSYEWTGLSLEEQEAGQQGAAIYIMSLLIVFLCLAALYESWSIPVSVMLVVPLGLLGAVLLTYFGMMILNNPNLSNNIYFKVAMIAVIGLSAKNAILIVEFAKDLQEQGEELFEATMHAAKLRLRPIIMTTLAFGLGVLPMAISSGAGAGSQNSVGIGVIGGVLTSTLLGIFFIPVFFVWIRTIFKYKPKNQNNQEQTS
>NZ_LR782267.1|WP_174505390.1|361524_362016_+|tRNA-(cytidine(34)-2'-O)-methyltransferase
MIHVVLYEPEIPSNTGNIIRLCANTGAQLHLIKPLGFELDDKKLKRAGLDYHEWAHMQVWENIEECLAFLQVQGIEKDAIYPLTTKGSETPHTSNLNRPVALLMGPETRGLPEHVRMMFPKEHWIRLPMAPSSRSLNLSNATAVILYEAWRQQGFKELKGNLP
>NZ_LR782267.1|WP_174505391.1|362151_362529_-|helix-turn-helix-transcriptional-regulator
MNNCPDFNVYHPNCPSRLFFENMADKWVLFILDTLKIEPLHFNLLRKNIIGISPKVLSQKLKMLERDGFIQRHLLDTRPIKVEYSLTILGKELAQTAYQFKIWAESNMQYVLEAQQKYDVSVKTS
>NZ_LR782267.1|WP_174505392.1|362647_363205_+|flavodoxin-family-protein
MSKIAVVYYSGYGHTKVIAETFAHEIDAQLVEINQEGEISEGDWEILNISDAIVFGAPTYMGGTPWQFKKFADATSKIWFTRGWEDKIFAGFTNSASLNGDKQVTLIGLQTLASQHGGIWISLGLAPSNTKAATRQDVNNLGGSVGLLVQSPSDASADEIPSGDLDTAKRFARRIKQITDKFVGS
>NZ_LR782267.1|WP_121972898.1|363279_364665_-|APC-family-permease
MTTQTGTQPAAKLQKNLVLWHIIIIGLAYIQPMTVFDTFGLVSQDSHGHVPTSYIFALIAILLTSISYGHMIKRYPSAGSAYTYAQKSIHPNVGFMVGWSSWLDYLLSPLVNIILADIYLRALFPDVNNWFWVIGLTLLMTVINLFGARFVARFNSTIVFVQIGVIFYFTYKVYLLLSQGINADGSLDQSQYQLWSIAPFWNEMTSIGALITGATILCFSFTGFDALSSLAEETKDTERVLPRAIFLTALIAGIIFIISTYFMQVYFPSDPVQYFKKIDETQPEILLAIGGITFQTVILYFAIVTVMASGISAHAGVSRLMYVMGRDGVINKKIFGHISPKLYTPTYNIIIVGVVALSAGFLDFEHIANLISFGALTAFSFVNFSVISRYALRDGRSKNMKDIINYIIIPVLGFASVFMMWLEIDQLALKIGLIWAAIGVGYLAYKTRGFRYPAPQHNEHE
>NZ_LR782267.1|WP_174505393.1|364930_366115_-|iron-containing-alcohol-dehydrogenase
MAKSYYEFFCPVKVIAGHAALEHIPFELASLGSKRPMIITDKGVRNNGLLKPIEAAFEGTDVVLAHIFDDVPPDSSLETVRAAAEAYRTNNCDAIIAVGGGSVIDTSKATNILVTEGGDDLLKYSGAHNLPRPLKPFFVIPTTSGTGSEVTMVAVVSDTQKQVKMAFASNYLMPHAAILDPRMTQTLPPHLTAMTAMDAMTHAVEAYTCLAANPMSDAYATAAIKKISDNLFNVLENLTDAEGRLELAQASTMAGVAFSNSMVGLVHSLGHALGAVAHLPHGLCMNLFLPYVLEYNKEVNGNKIADLLLPLVGPDIYAQTPADQRADKAISTLLAMRDRLFSLTKLPRTLSETGKVTKEQLDEVAEKALNDGSIIYNPKEATLKDLKSILEKAW
>NZ_LR782267.1|WP_174505394.1|366118_366652_-|hypothetical-protein
MISTQSVKPAFEQAYVKLMMDVIGRGLVMASQVDDEVKYEVSKFPVGFTLSMTVFPHGPAFVAQVNDQQQLTLIKSPSAKPDLTIMFKHMHHAFLVFSFQESTAQAFANDRMVADGDLSYAIRLVRCLNKMESLILPKVIAELAVKQYPNELNLKEKLSGAANIYLKVAQSYFTRSA
>NZ_LR782267.1|WP_121972901.1|366729_367389_-|lipoyl(octanoyl)-transferase-LipB
MNDAVLKPTLIIRKYESLTPYQDRFVEMKSFTEQRDQDTPDQLWLLQHPPVLTQGQAGKPEHILIQSDIPIVQSDRGGQVTWHGPGQLVIYFMFDLNRLGWNVRTLVSYAENLMISLLKKYGIDAYAKPDAPGVYVTERKIGSLGFKIRKGRSYHGLALNIDCDLFGFHTINPCGYAGLEMIRICDLVKNYPDFNQLCTDVIDHFTNSGYFSDVQVIPQ
>NZ_LR782267.1|WP_174505395.1|367707_368439_+|CDGSH-iron-sulfur-domain-containing-protein
MTTKPKYIIQVGTTAAPDSVFIQVTKDGPYKVSGAPQLLQVFIEQNETGNSGRYASGKTFESKDEMYLCRCGHSHHAPFCDGSHLKNEVHLTEKASFEPLLEGSMEIDGPKQILTDNEHYCAFSRFCDNGNQVWNEVQMHGESHEKLTEFMVHACAGGRLLVFDRETQQPIEHAENAGIYAIEDPAIGCSGPLMVRGGIRVESANGESYEIRNRQALCRCGESSNKPFCDGTHASVKYHDGIE
>NZ_LR782267.1|WP_121972903.1|368532_368820_-|DUF493-domain-containing-protein
MLDRTPSRELREDLWVFPMDYPIKLIGNAGEELRGAVVEILVKHFPDFDETTIKIQPSRTGKYHSLTAQLRFDELEQVHALYADLAACEHIRTAL
>NZ_LR782267.1|WP_121972904.1|368926_370816_-|RNA-polymerase-sigma-factor-RpoD
MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHERAPESDDAMFEGSNDTTDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGEISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYKDYENGERRLADILSGYLDPETDDDIPEVLEDESEDLEDEEEASSKPTKDVKLDDDDEEEESESDDDSEGDSGPDPEIAKARFAELEAAWVAAKDTLAKHGRNSAEGKQVLEDLATVFMMFKFTPRLFDIISEMIRGTHDQIRTSEREVMRYAVRRGRMDRTQFRTSFPGQESNPAWLDEQIAKAPAEIKNYLEKVRPDVLAFQQKIADIEKELDLNVKEIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDGNITSPIDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND

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Crispr_ID: NZ_LR782267_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782267_3

1052243-1052990

Orphan

Consensus_repeat	Method
GTTTGCCATCGTATAGATGGTTTAGAAG	PILER-CR
GTTTGCCATCGTATAGATGGTTTAGAAG	CRISPRCasFinder
GTTTGCCATCGTATAGATGGTTTAGAAG	CRT

12 spacers

The CRISPR arrays of NZ_LR782267_3

>merge|NZ_LR782267|3|1052243-1052990|PILER-CR,CRISPRCasFinder,CRT
GTTTGCCATCGTATAGATGGTTTAGAAGAAAATGTAACCAGTTTGTTAGATTGGGTGAACGTTTGCCATCGTATAGATGGTTTAGAAGTTGTAGCCAAAAAATTAAATCCTATTCACCTCGTTTGCCATCGTATAGATGGTTTAGAAGATGCACACTTGTACGTTCCGTATATCCTGTTAGTTTGCCATCGTATAGATGGTTTAGAAGCTAATTAAAGGGCTTCTATATCTTTGTTATCTGTTTGCCATCGTATAGATGGTTTAGAAGTATAACAACCCAAATGTGCGCAGATTTTTGGAGTTTGCCATCGTATAGATGGTTTAGAAGATACAAGTGCGTCAGCGATCTTTTTCGCGTACGTTTGCCATCGTATAGATGGTTTAGAAGGGAAGTTGTGGTTCAGAGCGCGGAAGTTGTTTGTTTGCCGTCGTATAGATGGTTTAGAAGCAAATACAAATCCAATCATTCTTGATGCTTCAGTTTGCCATCGTATAGATGGTTTAGAAGCGTATAAAGTACCGTTAAATATGTGAGAGATAGTTTGCCATCGTATAGATGGTTTAGAAGAGGTATTGCAATATGAGTTTGTTCAGATAGCTGTTTGCCATCGTATAGATGGTTTAGAAGTGAATGTGTTGAATGGTTTTCAAATTTATCGAGTTTGCCATCGTATAGATGGTTTAGAAGTGGTGGAAAAGAAAAGGGCGTTAATGTCATTCGTTTGCCATCGTATAGATGGTTTAAAAA

>NZ_LR782267|3|2|1052243-1052930|PILER-CR
GTTTGCCATCGTATAGATGGTTTAGAAG	AAAATGTAACCAGTTTGTTAGATTGGGTGAAC
GTTTGCCATCGTATAGATGGTTTAGAAG	TTGTAGCCAAAAAATTAAATCCTATTCACCTC
GTTTGCCATCGTATAGATGGTTTAGAAG	ATGCACACTTGTACGTTCCGTATATCCTGTTA
GTTTGCCATCGTATAGATGGTTTAGAAG	CTAATTAAAGGGCTTCTATATCTTTGTTATCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TATAACAACCCAAATGTGCGCAGATTTTTGGA
GTTTGCCATCGTATAGATGGTTTAGAAG	ATACAAGTGCGTCAGCGATCTTTTTCGCGTAC
GTTTGCCATCGTATAGATGGTTTAGAAG	GGAAGTTGTGGTTCAGAGCGCGGAAGTTGTTT
GTTTGCCGTCGTATAGATGGTTTAGAAG	CAAATACAAATCCAATCATTCTTGATGCTTCA
GTTTGCCATCGTATAGATGGTTTAGAAG	CGTATAAAGTACCGTTAAATATGTGAGAGATA
GTTTGCCATCGTATAGATGGTTTAGAAG	AGGTATTGCAATATGAGTTTGTTCAGATAGCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TGAATGTGTTGAATGGTTTTCAAATTTATCGA
GTTTGCCATCGTATAGATGGTTTAGAAG

>NZ_LR782267|3|3|1052243-1052990|CRISPRCasFinder
GTTTGCCATCGTATAGATGGTTTAGAAG	AAAATGTAACCAGTTTGTTAGATTGGGTGAAC
GTTTGCCATCGTATAGATGGTTTAGAAG	TTGTAGCCAAAAAATTAAATCCTATTCACCTC
GTTTGCCATCGTATAGATGGTTTAGAAG	ATGCACACTTGTACGTTCCGTATATCCTGTTA
GTTTGCCATCGTATAGATGGTTTAGAAG	CTAATTAAAGGGCTTCTATATCTTTGTTATCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TATAACAACCCAAATGTGCGCAGATTTTTGGA
GTTTGCCATCGTATAGATGGTTTAGAAG	ATACAAGTGCGTCAGCGATCTTTTTCGCGTAC
GTTTGCCATCGTATAGATGGTTTAGAAG	GGAAGTTGTGGTTCAGAGCGCGGAAGTTGTTT
GTTTGCCGTCGTATAGATGGTTTAGAAG	CAAATACAAATCCAATCATTCTTGATGCTTCA
GTTTGCCATCGTATAGATGGTTTAGAAG	CGTATAAAGTACCGTTAAATATGTGAGAGATA
GTTTGCCATCGTATAGATGGTTTAGAAG	AGGTATTGCAATATGAGTTTGTTCAGATAGCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TGAATGTGTTGAATGGTTTTCAAATTTATCGA
GTTTGCCATCGTATAGATGGTTTAGAAG	TGGTGGAAAAGAAAAGGGCGTTAATGTCATTC
GTTTGCCATCGTATAGATGGTTTAAAAA

>NZ_LR782267|3|2|1052243-1052990|CRT
GTTTGCCATCGTATAGATGGTTTAGAAG	AAAATGTAACCAGTTTGTTAGATTGGGTGAAC
GTTTGCCATCGTATAGATGGTTTAGAAG	TTGTAGCCAAAAAATTAAATCCTATTCACCTC
GTTTGCCATCGTATAGATGGTTTAGAAG	ATGCACACTTGTACGTTCCGTATATCCTGTTA
GTTTGCCATCGTATAGATGGTTTAGAAG	CTAATTAAAGGGCTTCTATATCTTTGTTATCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TATAACAACCCAAATGTGCGCAGATTTTTGGA
GTTTGCCATCGTATAGATGGTTTAGAAG	ATACAAGTGCGTCAGCGATCTTTTTCGCGTAC
GTTTGCCATCGTATAGATGGTTTAGAAG	GGAAGTTGTGGTTCAGAGCGCGGAAGTTGTTT
GTTTGCCGTCGTATAGATGGTTTAGAAG	CAAATACAAATCCAATCATTCTTGATGCTTCA
GTTTGCCATCGTATAGATGGTTTAGAAG	CGTATAAAGTACCGTTAAATATGTGAGAGATA
GTTTGCCATCGTATAGATGGTTTAGAAG	AGGTATTGCAATATGAGTTTGTTCAGATAGCT
GTTTGCCATCGTATAGATGGTTTAGAAG	TGAATGTGTTGAATGGTTTTCAAATTTATCGA
GTTTGCCATCGTATAGATGGTTTAGAAG	TGGTGGAAAAGAAAAGGGCGTTAATGTCATTC
GTTTGCCATCGTATAGATGGTTTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782267.1\|WP_121972582.1\|1058185_1058740_+\|ribosome-recycling-factor	unknown	unknown	gnl\|CDD\|178850
NZ_LR782267.1\|WP_121972609.1\|1042982_1043396_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|376861
NZ_LR782267.1\|WP_174505789.1\|1042215_1042965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_121972579.1\|1060322_1061519_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NZ_LR782267.1\|WP_121972577.1\|1062916_1065439_+\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|274514
NZ_LR782267.1\|WP_121972581.1\|1058746_1059487_+\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850
NZ_LR782267.1\|WP_171334395.1\|1046302_1046773_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174505790.1\|1046864_1047779_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234835
NZ_LR782267.1\|WP_121972589.1\|1049696_1050833_+\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_LR782267.1\|WP_174505793.1\|1059497_1060322_+\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|366491
NZ_LR782267.1\|WP_121972585.1\|1054504_1055614_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226370
NZ_LR782267.1\|WP_121972594.1\|1043405_1045682_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|274241
NZ_LR782267.1\|WP_174505794.1\|1061521_1062877_+\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|182723
NZ_LR782267.1\|WP_121972591.1\|1047895_1048549_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_LR782267.1\|WP_121972583.1\|1057377_1058106_+\|UMP-kinase	unknown	unknown	gnl\|CDD\|234735
NZ_LR782267.1\|WP_121972584.1\|1055975_1057319_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NZ_LR782267.1\|WP_121972593.1\|1045745_1046099_+\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|235016
NZ_LR782267.1\|WP_121972588.1\|1051070_1051994_+\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NZ_LR782267.1\|WP_174505791.1\|1048807_1049692_+\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
NZ_LR782267.1\|WP_174505792.1\|1053030_1054518_-\|nitrogen-regulation-protein-NR(I)	unknown	unknown	gnl\|CDD\|273818

Protein	Function_ID	Function_description	E-value
NZ_LR782267.1\|WP_121972582.1\|1058185_1058740_+\|ribosome-recycling-factor	gnl\|CDD\|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	2.84729e-105
NZ_LR782267.1\|WP_121972609.1\|1042982_1043396_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|376861	pfam02617, ClpS, ATP-dependent Clp protease adaptor protein ClpS. In the bacterial cytosol, ATP-dependent protein degradation is performed by several different chaperone-protease pairs, including ClpAP. ClpS directly influences the ClpAP machine by binding to the N-terminal domain of the chaperone ClpA. The degradation of ClpAP substrates, both SsrA-tagged proteins and ClpA itself, is specifically inhibited by ClpS. ClpS modifies ClpA substrate specificity, potentially redirecting degradation by ClpAP toward aggregated proteins.	1.63916e-44
NZ_LR782267.1\|WP_121972591.1\|1047895_1048549_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.81494e-18
NZ_LR782267.1\|WP_121972579.1\|1060322_1061519_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_LR782267.1\|WP_121972577.1\|1062916_1065439_+\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_LR782267.1\|WP_174505793.1\|1059497_1060322_+\|phosphatidate-cytidylyltransferase	gnl\|CDD\|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	1.18644e-51
NZ_LR782267.1\|WP_121972581.1\|1058746_1059487_+\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	9.06088e-113
NZ_LR782267.1\|WP_174505790.1\|1046864_1047779_-\|ornithine-carbamoyltransferase	gnl\|CDD\|234835	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional.	0
NZ_LR782267.1\|WP_121972585.1\|1054504_1055614_-\|PAS-domain-containing-protein	gnl\|CDD\|226370	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms].	5.9069e-114
NZ_LR782267.1\|WP_121972594.1\|1043405_1045682_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|274241	TIGR02639, ATP-dependent_Clp_protease_subunit, ATP-dependent Clp protease ATP-binding subunit clpA. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_LR782267.1\|WP_174505794.1\|1061521_1062877_+\|RIP-metalloprotease-RseP	gnl\|CDD\|182723	PRK10779, PRK10779, sigma E protease regulator RseP.	1.00981e-132
NZ_LR782267.1\|WP_121972589.1\|1049696_1050833_+\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_LR782267.1\|WP_121972583.1\|1057377_1058106_+\|UMP-kinase	gnl\|CDD\|234735	PRK00358, pyrH, uridylate kinase; Provisional.	8.24756e-128
NZ_LR782267.1\|WP_121972584.1\|1055975_1057319_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NZ_LR782267.1\|WP_121972593.1\|1045745_1046099_+\|YnfA-family-protein	gnl\|CDD\|235016	PRK02237, PRK02237, YnfA family protein.	2.90832e-37
NZ_LR782267.1\|WP_121972588.1\|1051070_1051994_+\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	6.79533e-162
NZ_LR782267.1\|WP_174505791.1\|1048807_1049692_+\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
NZ_LR782267.1\|WP_174505792.1\|1053030_1054518_-\|nitrogen-regulation-protein-NR(I)	gnl\|CDD\|273818	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I). This model represents NtrC, a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase, GlnA, and may be called GlnL, GlnG, etc. [Central intermediary metabolism, Nitrogen metabolism, Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	0

>NZ_LR782267.1|WP_121972588.1|1051070_1051994_+|polyphosphate-kinase-2
MTDHQLGPFEAIQNQDNKHLPIFENTVLAYQGKRESEDGSRNDLPESYPYKTRMTRQTYEAQKKLLQIELLKVQSWVKETGQKIVCLFEGRDAAGKGGTIKRYMEHLNPRGARVVALEKPNDVEKGQWYFQRYMKELPTAGEMVFFDRSWYNRAGVERVMGFCEPHEYLQFMRQTPEIERMLVNSGIHLFKFWFSVSREEQLRRFISRRDDPLKHWKLSPIDIQSLDRWDEYTEAKNQMFFHTHTADAPWTIIKSDDKKRARLNCIRYFLQQLDYPNKDLNMHTKVDSLIVNVPNHLFKSGYDMKED
>NZ_LR782267.1|WP_121972589.1|1049696_1050833_+|2-methylcitrate-synthase
MAEGKVLTGAGLRGQVAGKTALSTVGKSGAGLTYRGYDVQDLAENCQFEEVAYLIFFGELPTAEQLKTYKAKLKSLRSLPQALKEVLERIPADSHPMDVMRTGVSMLGNLETEKSFDEQQDVADRILATLPAIICYWYRFSHDGVRIEENTDDDSIGAQFLHLLRGEKPNELHEQVMNVSLILYAEHEFNASTFTARVCASTLSDMHSCITGAIGSLRGPLHGGANEAAMEMIENWTSPEEAEREMLGKLARKEKIMGFGHAIYKDNDPRNGIIKIWSERLAKDVGDTVLYPVSVRCEEVMWREKKLFCNADFFHASAYHFMGIATKLFTPIFVMSRVTGWAAHVMEQRADNRIIRPSADYTGPELRKVVPIEQRTAA
>NZ_LR782267.1|WP_174505791.1|1048807_1049692_+|methylisocitrate-lyase
MTEQTSAGLRFRQALEVEKPLQIIGTVNAYAAMMAKQVGYKAIYVSGAGVANYSYGLPDLGMTSLDNVLEDVRRITERVDTPLLVDIDTGWGGAFNIARTIKEMIRAGAAAVHIEDQVAQKRCGHRPNKEIVSQQEMVDRIKAAVDAKTDSNFVVMARTDALQKEGLQAVIDRACACVEAGADAIFAEAMTDITMYKTVCDAVGVPVLANITEFGDTPYYTVDELGEQGIAMVLYPLSATRAMQKAALEVMRSIRENGTQVQVLDTMQQRKELYEFLDYHTFENTLDKLFKQEN
>NZ_LR782267.1|WP_121972591.1|1047895_1048549_-|TetR/AcrR-family-transcriptional-regulator
MSLDLAQIESCGCEFPQTRRGHERRLSLLLSANTLFLERGYDAVSLDDIVNHAGGSKASIYKYFGNKEGLFIAICDYHRELFFKDICVPFNPEIDDLKNYLVETLINFYRHIIDPEHTAFMRLVMEQSQRNPDIARYLHEKGPKFIQMTIANILSRAVEQGKLVCPNPLYSGMFYFGILRNCEWRIMMGLNEQFPEQEMIEYIKYCVDRFLDGHQKV
>NZ_LR782267.1|WP_174505790.1|1046864_1047779_-|ornithine-carbamoyltransferase
MALRHFLTLRDLSTAELNRIIERAQELKRMQHNNEVFQPFVGKVMGMIFEKSSTRTRVSFEAGMSQFGGSAIFLSPRDTQLGRGEPIEDSARVISSMLDIIMIRTFGHDIVERFAEYSKVPVINALTDDHHPCQLLADVQTFVEHRGPIEGKTVAWIGDGNNMCNSYIEAAHMWGFKLKIASPKGYEPQEQFLSEFAHCVELVNSAEDAAVNADLIVTDVWASMGQEEEQKIREKAFADHQVNEKLMDLAHPDCLFMHCLPAHRGEEISENMLDHKNAVVWDEAENRLHAQKALVEFLINENLK
>NZ_LR782267.1|WP_171334395.1|1046302_1046773_-|hypothetical-protein
MNLKAISISLICLCTTIVAHAAPSELDQYLIKKQYIDTDFKIKNQIGLKDLLSYLSDEDSRTLPLQIDQNTLIEKLRLHTDHIEIQGIITTPDFNQFEKDIGEPEVKSLLKRNILENCSIIFEHEFQRNNPYYADIKLSSEHHQYIFKISNQQCRY
>NZ_LR782267.1|WP_121972593.1|1045745_1046099_+|YnfA-family-protein
MDIQIMKIITTFFLFFVTAIAEILGCYFPYLILNQGKTYWLWIPAIVSLGVFVWLLTLHPAASGKIYAAYGGVYIFTALMWLRLVDQMPLTRWDILGGFIVLVGAAVIILQPQGLLR
>NZ_LR782267.1|WP_121972594.1|1043405_1045682_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEEYVEQHTPKLGENSDQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRHQINRLTLTQYLSHGTRKDEIQVEEENEDLEGEANASQNAGPLELYTVNLNIEAQKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLANAEVYSLDIGSLVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSISESIDILRGLKSKFEDFHHVEYEDKALVSAVELSAKFINDRFLPDKAIDVIDEAGAQRRLKAENDGTLITVENIEDIVSKIARIPPKTVSKDDKSVLEHLERDLKRVVFGQDEAITALASAIKLSRAGLKSPDKPVGSFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGSLTDNNGRKSDFRNVIIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGVIQFKALPTSVIESVVDKFLTELQAQLDEKKVVLEVDQSARDWMAENGYDRLMGARPMQRLIQEHLKKPLAEMILFGELADHGGNVAVSVKKENGKAVGLKLEVFEDQTAEPA
>NZ_LR782267.1|WP_121972609.1|1042982_1043396_+|ATP-dependent-Clp-protease-adapter-ClpS
MRSTKKRTQINELKASFFQTGYVDWHISPRMSSASDEHPEGDVVVQTAPPQVKRPPMYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKE
>NZ_LR782267.1|WP_174505789.1|1042215_1042965_+|hypothetical-protein
MYNSETNDSTNSAQLNKKPFMRGNSPLAIGGVVLCVGSLLIGYTVGHRQGLSVVGYDADAQQLVDVVDKQKVAISAMNKSLNATVQERDVAVTNSNDLLEKLSSTKAEKDQYLSQALMYREILRLRGGLSLTVQNLAIKPLPENAFEYQIDLLQVSPAHRRVSGTVELRLISGTEVLTVPLEDNKYNFEDYARLTGRWTMPKGFNPQFIEVRLNGGTSVIRRFSWSRGKPVESSTSIISEIPQAEANAQ
>NZ_LR782267.1|WP_174505792.1|1053030_1054518_-|nitrogen-regulation-protein-NR(I)
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTSFEEAQSALNQLGTDAPDVILTDIRMPGIDGLTFLGKVKSSYPDLPVIIMTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAIMHINKLQQQESAKNSTPIQSAEIIGESPAMQEVFRAIGRLSQSHITVLINGESGTGKELVAHALHRHSPRSSKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQRQGRFEQANGGTLFLDEIGDMPFETQTRLLRVLADGEFYRVGGHIPVRVDVRIVAATHQDLEKLVHEGRFREDLYHRLNVIRIHIPKLSHRSEDIPMLAQHFLARAGKELGVSPKILRPETQEYMQKLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQIPLSQSTENNQTTNGFDRISLHHWDELLGQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMDSTDDEDEEEKISLTE
>NZ_LR782267.1|WP_121972585.1|1054504_1055614_-|PAS-domain-containing-protein
MDQYPTIDYRLLVDNMSTAILLVDKDLNIFYLNSSCEALFDVSLTRALGQPVINILHAPNDSFDTHEALLNTLHKGQAYTRREAIINVNFKDIHVDYTVSQLSTGKSYHPLLLIELNSTDRMLKIAKEENSIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPQYSEFTDVIISEVDRLRTLADTMLGSRQLPSYEPVNVHEPLERVRSLIVNQTKKKIKITRDYDLSLPEVKADRDQLIQVILNISVNAIQAMTENKDFFVDHQPELILRTRIQRLVTINGVLNKSAVRIDIQDNGPGVPEEILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSVPGKTVFSLYLPWESNHVAK
>NZ_LR782267.1|WP_121972584.1|1055975_1057319_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MKSPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHNPFIDLVPEQGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLNEAQALKKAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLERLKLWREKCPELVIRSTFVVGFPGETEEDFQMLLDWLKEAQLDRVGCFTYSPVEGATANDLPDHVAEEIKQERYERFMQVQQEISSAKLQKRIGQTMTVLVDGLEDEYPVAVARSYADAPEIDGNVFVEDIDKSQIKAGDLLEVEITDADEYDLFAKLIKIKSA
>NZ_LR782267.1|WP_121972583.1|1057377_1058106_+|UMP-kinase
MSDSKNPRYSRILLKLSGEALAGNKDMGIDAQVLDQMSLSIAHLVGLGVQVGIVVGGGNLYRGSQLQKDGLVGRVTGDQMGMLATVMNGLAMRDALVRRNIKTRLMSALPIGTVVESYSSRDAIRHLTQGEVCVFVAGTGNPFFTTDTAACLRGIEIEASLILKATKVDGVYNKDPSKYEDAIKYDHLTFDQVLDEKLGVMDLTAICLCRDHNVPLQVFDMNKSGALLSVVMGEKEGTHVTN
>NZ_LR782267.1|WP_121972582.1|1058185_1058740_+|ribosome-recycling-factor
MINDLKKDSEERMQKSLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFERTMVSAIDKAIRESDLGLNPITADSIRVPLPALTEETRRDMQKVARAEAENAKVAIRNIRRDVLGDIKSLLKDKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV
>NZ_LR782267.1|WP_121972581.1|1058746_1059487_+|di-trans,poly-cis-decaprenylcistransferase
MTHSEDNHLPKHVAIIMDGNNRFAKKKHLQKGDGHREGKNVLDPIVEHSLKVGVKALTVFAFSSENWNRPQYEVDLLMELLKDTINEQIPRMEKFEISLRFIGDRSRISPELQDLMLHAEQRTAKFCNMTLTIAVSYGGMWDIADTAKRIAEQVKKQQLEVDQIDSDLFGKMISLGDLPPVDLLIRTGGDYRLSNFLLWQCAYAELYFTQTLWPEFNVQELEHAFGVFSGRERRFGKTSEQIQQEK
>NZ_LR782267.1|WP_174505793.1|1059497_1060322_+|phosphatidate-cytidylyltransferase
MLERIITALVLVAVVLSCMFATTSQYPMLVLMIIAAGTAGYEWFKLMPSQTKQVNLIKAGSFGILTAVFSGLALYFSDLALLLWSASILTWLFSVYWVKNFPEYDGWYNPSLNIIGLVLISAAVTAIFEVWKTSPWWLMYLFLLVWGADSGAYFIGRKFGKRKLAPDVSPNKSVEGLIGGIVTVIVVIITVQFVYLNLSFAQNILFLILSILTAFSSVLGDLFESMIKRRAGVKDSGRVLPGHGGVLDRIDSLLAAAPVFAAAMYILKLIGVDL
>NZ_LR782267.1|WP_121972579.1|1060322_1061519_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MTQSVCILGVTGSIGQSTLKILEQHPDKYSVFAVTAYSRIQNLAVICKQYRPKVVVVPSSKVDELQLLLKQYQVDDVEILTDEEGLVNVAAHSSVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGDIMIQAAKDHQALLLPVDSEHNAIFQCLPQNYLQIDRQGEPQLGVSRILLTASGGPFLNHSLDELKSVTPAQAVKHPNWSMGQKISVDSATLMNKGLELIEACHLFSISEHFVTVVVHPQSIIHSMVQYVDGSTLAQMGNPDMCTPIAHALAWPERIHTHVPALDLFATQQLNFIEPDVVRFPALKLARQAMKAGGLAPSILNAANEIAVAAFLKQQIGFLQIAQVVEHTLNHVQNGVAESIAQILDTDRLARQVASTYILRLEH
>NZ_LR782267.1|WP_174505794.1|1061521_1062877_+|RIP-metalloprotease-RseP
MNVLFIIAAAIFLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLIKWTSKKSGIQYQLSALPLGGYVKMLDEREGNVKTEDLPYAFNRQSPWKRIAIVAAGPLINLIFAVLLFWILFLPAQEQLNTRIGKILPNTPAAQVQMQAGDKVVSVDGTDTPTWEKLNYALVNRIGETGQIQIQAERNGQLKTFELPIQDFLKNQQQSALDALGFIPYRPVIPAVVEKMSPDGAAIRQGMKEGDKIISVNGIAMKDWFDVVDVVQKSPEKLLAIDVLRQGQIVHLQVMPQGKRDNMGNVTGLLGVQAHTAKVTIPTEFKQTIQYNPAQALVVATEKTWQISGMILNSIVKMVRGLIGLDNLSGPITIAKVAGQSAEMGWQTFISFMALMSVSLGILNLLPIPMLDGGHLVYYFIEAIRGKPVSEQIQIVGLKIGMVLLGSMMLLALFNDFMRL
>NZ_LR782267.1|WP_121972577.1|1062916_1065439_+|outer-membrane-protein-assembly-factor-BamA
MQHSHLFMPLALVSAMVTAQQVYAADQFVVKDIKIEGLVRLSPSNVLTMIPINSGDSVSDPQISDAIRALYASNMFDDIQAVNDNGTLVFKVLERPIISKINFKGNKLIPKEALTDGLKKMGISEGEVLKKSAIQVLQNELIQQYSQQGRYDADITVDTVARPNNRVDLDINFKEGKAAKVFNINVIGNTVFSEDDIKRAFTIKESGWASVVTRNDRYAREKMAASLEALRALYLNKGYINFEINNSSLDISEDKKNIFIEVAVNEGEQFKFGQTKFLGDALYKPEELKALQIYRDGDIYSQQKENSVKQLLLRKYGNAGYYFAEVNVVPEINNDTHIVNLNYYINPGQQVTVRRINFAGNTKTADDVLRRELRQMEGALASNEKIDLSKVRLERTGFFKTVDIKPVRVPGSPDQVDLNVNVEEQHSGTSTLAVGYSQNGGITFQAGLSQTNFFGTGNRVAMDFSRSETQDYYNLSVTDPYFTIDGVSRGYNAYYRKTKLNSDYNVNNYVTDSYGGGLTFGYPIDENQNISAGITLDNTKVTTGPYVSTYIRDYLMKNDGKETQSSVSYCQGNIDNNNYDDHGNVISCKDGSEPLTSSSQYEGEYFTYTLNLGWSYNTLNRPIFPTSGMSHRVGVEVALPGSDVEYQKVTYDAQAFLPLGKDFVLRGYGKLGFGNDLPFYKNFFAGGYGSVRGYDNSTLGPYYPSLNLNDNKMRDTDPERVGGNAMVTFGTELALPVPFKGDWARQVRPVVFAEGGQVFDTQCDIPTGSLYINGATNPVNAKQFCKDNFDFDASNFRYSVGVGFTWITMIGPLSLSYAFPLNDKPGDETKEIQFEIGRTF

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Crispr_ID: NZ_LR782267_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782267_4

2124694-2125381

TypeI-F

Consensus_repeat	Method
GTTCACCATCGCATAGATGGTTTAGAAG	PILER-CR
GTTCACCATCGCATAGATGGTTTAGAAG	CRISPRCasFinder
GTTCACCATCGCATAGATGGTTTAGAAG	CRT
GTTCACCATCGCATAGATGGTTTAGA	PILER-CR

11 spacers

cas1,cas6f,cas7f,cas5f,cas8f,cas3f

The CRISPR arrays of NZ_LR782267_4

>merge|NZ_LR782267|4|2124694-2125381|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTCACCATCGCATAGATGGTTTAGAAGATCATAAAGTTGTTTAAGAATGGTCGAATCTAGTTCACCATCGCATAGATGGTTTAGAAGACCAACAATCATCACGCTCAAAGTCATCAAGAGTTCACCATCGCATAGATGGTTTAGAAGACAAGTGTTTTAAGTTGCGGAGTGAAGTCAATGTTCACCATCGCATAGATGGTTTAGAAGGAAGTAAATAAACAGACTTGAATGGTCTTCATGTTCACCATCGCATAGATGGTTTAGAAGGCCCTGTAATTGTACTCAGTAATAATGATGGTGTTCACCATCGCATAGATGGTTTAGAAGATAAAGAATTGGAACTGGATTGCCTTGTGCAAGTTCACCATCGCATAGATGGTTTAGAAGGATCAAAGCCATGCCCACGGCAGAAGTTGTGCGTTCACCATCGCATAGATGGTTTAGAAGACACTCGGCGGGAACGCTTAGGAACAGCGGCAGTTCACCATCGCATAGATGGTTTAGAAGAGTCACCGCCGCAAGCTATAGCAACATTCAGTGTTCACCATCGCATAGATGGTTTAGAAGAACATCAGAACCCGAGCCGACATTACCAATCCGTTCACCATCGCATAGATGGTTTAGAAGCTGAGAATATGACCACAGTTGAACTTTTGATGGTTCACCATCGCATAGATGGTTTAAGCT

>NZ_LR782267|4|3|2124694-2124961|PILER-CR
GTTCACCATCGCATAGATGGTTTAGAAG	ATCATAAAGTTGTTTAAGAATGGTCGAATCTA
GTTCACCATCGCATAGATGGTTTAGAAG	ACCAACAATCATCACGCTCAAAGTCATCAAGA
GTTCACCATCGCATAGATGGTTTAGAAG	ACAAGTGTTTTAAGTTGCGGAGTGAAGTCAAT
GTTCACCATCGCATAGATGGTTTAGAAG	GAAGTAAATAAACAGACTTGAATGGTCTTCAT
GTTCACCATCGCATAGATGGTTTAGAAGGCCCTGTAATTGTACTCAGTAATAATGATGGTGTTCACCATCGCATAGATGGTTTAGAAGATAAAGAATTGGAACTGGATTGCCTTGTGCAAGTTCACCATCGCATAGATGGTTTAGA	AGGATCAAAGCCATGCCCACGGCAGAAGTTGTGC
GTTCACCATCGCATAGATGGTTTAGA	AGACACTCGGCGGGAACGCTTAGGAACAGCGGCA
GTTCACCATCGCATAGATGGTTTAGA	AGAGTCACCGCCGCAAGCTATAGCAACATTCAGT
GTTCACCATCGCATAGATGGTTTAGA	AGAACATCAGAACCCGAGCCGACATTACCAATCC
GTTCACCATCGCATAGATGGTTTAGA	AGCTGAGAATATGACCACAGTTGAACTTTTGATG


>NZ_LR782267|4|4|2124694-2125381|CRISPRCasFinder
GTTCACCATCGCATAGATGGTTTAGAAG	ATCATAAAGTTGTTTAAGAATGGTCGAATCTA
GTTCACCATCGCATAGATGGTTTAGAAG	ACCAACAATCATCACGCTCAAAGTCATCAAGA
GTTCACCATCGCATAGATGGTTTAGAAG	ACAAGTGTTTTAAGTTGCGGAGTGAAGTCAAT
GTTCACCATCGCATAGATGGTTTAGAAG	GAAGTAAATAAACAGACTTGAATGGTCTTCAT
GTTCACCATCGCATAGATGGTTTAGAAG	GCCCTGTAATTGTACTCAGTAATAATGATGGT
GTTCACCATCGCATAGATGGTTTAGAAG	ATAAAGAATTGGAACTGGATTGCCTTGTGCAA
GTTCACCATCGCATAGATGGTTTAGAAG	GATCAAAGCCATGCCCACGGCAGAAGTTGTGC
GTTCACCATCGCATAGATGGTTTAGAAG	ACACTCGGCGGGAACGCTTAGGAACAGCGGCA
GTTCACCATCGCATAGATGGTTTAGAAG	AGTCACCGCCGCAAGCTATAGCAACATTCAGT
GTTCACCATCGCATAGATGGTTTAGAAG	AACATCAGAACCCGAGCCGACATTACCAATCC
GTTCACCATCGCATAGATGGTTTAGAAG	CTGAGAATATGACCACAGTTGAACTTTTGATG
GTTCACCATCGCATAGATGGTTTAAGCT

>NZ_LR782267|4|3|2124694-2125381|CRT
GTTCACCATCGCATAGATGGTTTAGAAG	ATCATAAAGTTGTTTAAGAATGGTCGAATCTA
GTTCACCATCGCATAGATGGTTTAGAAG	ACCAACAATCATCACGCTCAAAGTCATCAAGA
GTTCACCATCGCATAGATGGTTTAGAAG	ACAAGTGTTTTAAGTTGCGGAGTGAAGTCAAT
GTTCACCATCGCATAGATGGTTTAGAAG	GAAGTAAATAAACAGACTTGAATGGTCTTCAT
GTTCACCATCGCATAGATGGTTTAGAAG	GCCCTGTAATTGTACTCAGTAATAATGATGGT
GTTCACCATCGCATAGATGGTTTAGAAG	ATAAAGAATTGGAACTGGATTGCCTTGTGCAA
GTTCACCATCGCATAGATGGTTTAGAAG	GATCAAAGCCATGCCCACGGCAGAAGTTGTGC
GTTCACCATCGCATAGATGGTTTAGAAG	ACACTCGGCGGGAACGCTTAGGAACAGCGGCA
GTTCACCATCGCATAGATGGTTTAGAAG	AGTCACCGCCGCAAGCTATAGCAACATTCAGT
GTTCACCATCGCATAGATGGTTTAGAAG	AACATCAGAACCCGAGCCGACATTACCAATCC
GTTCACCATCGCATAGATGGTTTAGAAG	CTGAGAATATGACCACAGTTGAACTTTTGATG
GTTCACCATCGCATAGATGGTTTAAGCT

>NZ_LR782267|4|4|2125054-2125379|PILER-CR
	ATCATAAAGTTGTTTAAGAATGGTCGAATCTA
GTTCACCATCGCATAGATGGTTTAGAAG	ACCAACAATCATCACGCTCAAAGTCATCAAGA
GTTCACCATCGCATAGATGGTTTAGAAG	ACAAGTGTTTTAAGTTGCGGAGTGAAGTCAAT
GTTCACCATCGCATAGATGGTTTAGAAG	GAAGTAAATAAACAGACTTGAATGGTCTTCAT
GTTCACCATCGCATAGATGGTTTAGAAGGCCCTGTAATTGTACTCAGTAATAATGATGGTGTTCACCATCGCATAGATGGTTTAGAAGATAAAGAATTGGAACTGGATTGCCTTGTGCAAGTTCACCATCGCATAGATGGTTTAGA	AGGATCAAAGCCATGCCCACGGCAGAAGTTGTGC
GTTCACCATCGCATAGATGGTTTAGA	AGACACTCGGCGGGAACGCTTAGGAACAGCGGCA
GTTCACCATCGCATAGATGGTTTAGA	AGAGTCACCGCCGCAAGCTATAGCAACATTCAGT
GTTCACCATCGCATAGATGGTTTAGA	AGAACATCAGAACCCGAGCCGACATTACCAATCC
GTTCACCATCGCATAGATGGTTTAGA	AGCTGAGAATATGACCACAGTTGAACTTTTGATG
GTTCACCATCGCATAGATGGTTTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782267.1\|WP_174506404.1\|2115703_2118919_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_LR782267.1\|WP_174506415.1\|2138143_2140570_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_LR782267.1\|WP_174506411.1\|2130251_2131172_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_LR782267.1\|WP_171334400.1\|2119432_2119609_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174506409.1\|2126994_2128392_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|273797
NZ_LR782267.1\|WP_174506403.1\|2114446_2115262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174506410.1\|2128824_2130156_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|181707
NZ_LR782267.1\|WP_174506401.1\|2111936_2112665_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349771
NZ_LR782267.1\|WP_121972636.1\|2121901_2122999_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|274205
NZ_LR782267.1\|WP_174506405.1\|2120987_2121872_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|187807
NZ_LR782267.1\|WP_174506414.1\|2137402_2138008_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|274270
NZ_LR782267.1\|WP_174507605.1\|2119809_2120991_+\|hypothetical-protein	cas8f	cls000849_cas8f_CAS-I-F	unknown
NZ_LR782267.1\|WP_121972629.1\|2131356_2132592_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_LR782267.1\|WP_174506406.1\|2123000_2123642_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_LR782267.1\|WP_174506413.1\|2133967_2136895_-\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_LR782267.1\|WP_174506412.1\|2132609_2133479_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238636
NZ_LR782267.1\|WP_174506402.1\|2112700_2113879_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR782267.1\|WP_174506407.1\|2123644_2124598_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_LR782267.1\|WP_121972626.1\|2136978_2137356_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133410
NZ_LR782267.1\|WP_174506408.1\|2125465_2126728_-\|RND-transporter	unknown	unknown	gnl\|CDD\|270320

Protein	Function_ID	Function_description	E-value
NZ_LR782267.1\|WP_174506404.1\|2115703_2118919_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_LR782267.1\|WP_174506415.1\|2138143_2140570_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_LR782267.1\|WP_174506411.1\|2130251_2131172_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.05297e-37
NZ_LR782267.1\|WP_174506409.1\|2126994_2128392_-\|amino-acid-permease	gnl\|CDD\|273797	TIGR01773, GABA_permease, gamma-aminobutyrate permease. GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_LR782267.1\|WP_121972629.1\|2131356_2132592_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.00771e-156
NZ_LR782267.1\|WP_174506401.1\|2111936_2112665_-\|hypothetical-protein	gnl\|CDD\|349771	cd05386, TraL, transfer origin protein TraL. The transfer origin protein TraL is member of the SIMIBI superfamily which contains a ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion. The specific function of TraL protein is unknown.	1.58329e-41
NZ_LR782267.1\|WP_121972636.1\|2121901_2122999_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|274205	TIGR02566, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	5.72467e-120
NZ_LR782267.1\|WP_174506405.1\|2120987_2121872_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187807	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	6.03161e-66
NZ_LR782267.1\|WP_174506414.1\|2137402_2138008_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|274270	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase. This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism. [Central intermediary metabolism, One-carbon metabolism].	2.72586e-39
NZ_LR782267.1\|WP_174506410.1\|2128824_2130156_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|181707	PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional.	0
NZ_LR782267.1\|WP_174506406.1\|2123000_2123642_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	3.75315e-20
NZ_LR782267.1\|WP_174506413.1\|2133967_2136895_-\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_LR782267.1\|WP_174506412.1\|2132609_2133479_-\|amidohydrolase-family-protein	gnl\|CDD\|238636	cd01311, PDC_hydrolase, 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.	3.22426e-77
NZ_LR782267.1\|WP_174506407.1\|2123644_2124598_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	2.47202e-155
NZ_LR782267.1\|WP_121972626.1\|2136978_2137356_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133410	cd04783, HTH_MerR1, Helix-Turn-Helix DNA binding domain of the MerR1 transcription regulator. Helix-turn-helix (HTH) transcription regulator MerR1. MerR1 transcription regulators, such as Tn21 MerR and Tn501 MerR, mediate response to mercury exposure in eubacteria. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines that define a mercury binding site. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	4.93414e-38
NZ_LR782267.1\|WP_174506408.1\|2125465_2126728_-\|RND-transporter	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.91174e-07

>NZ_LR782267.1|WP_174506407.1|2123644_2124598_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MNDLRQQRSRALMLSKRACVFYLERVRVILKDDRIVYLTENLQPIEHYFNIPEKNTAFLLLGKGSSLTDAAARRLAESNVMVGFCGSGGSPLFSSLDLTFLAPQSEYRPTEYMQTWMKAWLDDDARLLMAKVLLSERIAIVQNIWKKNPALIQHGIYLDQIASQRFQKDIDEADNQTELLAAEGRWAKALYRQLAQGFDFEFNREEGKSSHDSMADTANSYLDHGNYIAYGYAAVTLNGMGISFALPILHGKTRRGGLVFDIADLVKDAFVMPQAFASAKFGHNQKEFRMQLIETCQDQDVLDYMFSFISDLCNKIK
>NZ_LR782267.1|WP_174506406.1|2123000_2123642_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MQANFYIDIRIVDSADDGELALPHLRNQIYSIVHAAFREMPERFALALEISPRQQRKMQANELKYGRKTSGNYDVLRIFSEKQDDLEQLINHIKGHWKIQDYAVLSPAALAVPTAKITGWKSYNRFRIPTVKMERNLLTDPNKKTLHERRLLEARKLPYFKVSSQSTGQVFTVPVDIKDVEVSNANNTGNGLPDSYGLARKTQPFALPVFEVV
>NZ_LR782267.1|WP_121972636.1|2121901_2122999_+|type-I-F-CRISPR-associated-protein-Csy3
MSKTEIFKKLPGSLSLQRGTIVSDGAFYHLFENGESEPLHVMYHGIRGTQNVAGNKEKGSATGNSLAREVSNIQMTESAKLLPNAKLLVKWDLRFIDLDHILFACATKAGADKEDEQNFRRAFKEFTDKAKNSEGLKEIARRYVRNIVNARWLWRNRTIAENITIKVSEIEYQDNSNSAKKYVNTLEFNALEYGLKSFENVSENEQKIADIIVRGMCGDNRANLHIEAIVDFGASGIEVFPSQNYLEDKPKGFSRSLYQIDPKPPVRQSNDNQYLGQAAIRDQKIGNALRTIDTWYPAFVENDSKPIPVEPNGASLDAQLFFRVGKEKVSAFDILKEIQTLDPDSERGMFLLACLIRGGVYSEGE
>NZ_LR782267.1|WP_174506405.1|2120987_2121872_+|type-I-F-CRISPR-associated-protein-Csy2
MSFLVIPYLKVQAANFQSNGLLMGGAPLMATAMFSHNLARQIDADIEGFYYIHHDMQRLGGLAYGRFTPAQRRGAVFIGKNDYSSKNKYALSLQPTASCHLLVSLVIEFNEKRFDLDTFVQILKRSKFAGGQITEFGQLKEFNEADEALKHISSGFLVQDRHDLLEKYQLAYQVNRLQAFTQLLTHRPTAKDAPPALELLPDESLAWLSATTMGYALLEPETFDRTGIRHADDQEQTAHAYAEPLTGLIQYISLNQVLDDYASERPLHWNDLDELKWSYHWQQQDIFLLQQNSN
>NZ_LR782267.1|WP_174507605.1|2119809_2120991_+|hypothetical-protein
MINEDVYQQTLAESVHFSVKTINSNIEKGGIRLTKDQKLDLPYISARTLLADDFLIPTDYQANAGKTATYFKVIKAAQLDEDLSEADDEFKQNVGALKPYLNDTFSELYSSGLEHIDVRMRQLLIPKNDGYISISPISAAGVNHYLNIEVDTLKEQRKNEGKDSKLKNIQTAVFGIGGANPQNVGSLVRSMQRPIVLGSPTLNHQARLAFQYFYKGFDYKLSNAFINRDMYVELTIYARRLERQSSLTHNIGLHEQGVYAPFSNLKEREKEFSTIEKAVANVLAQGSEILEILKSIKEQLPSQKVLERKSFWSHPDVKILTQGLINPELQQFDDWKELFAEHLAKKITQHSYWQKEVEIQKKWAAQTDQKIDILIDEENSKGFLKRRILELLK
>NZ_LR782267.1|WP_171334400.1|2119432_2119609_+|hypothetical-protein
MLPQQLNLFEDEVSTSNSDDSTFDTSSIEEISIPDLIARIRYLESAIQQVKTILKIKM
>NZ_LR782267.1|WP_174506404.1|2115703_2118919_-|type-I-F-CRISPR-associated-helicase-Cas3
MHVIFISACEKRAIKKTRAILDSYAIRTGQSSWQAPMTMEGLKEIRTALKRTATRQTAVAAYVNYGMRRMKLVWIVGSKTKFGADGAYPVASSRKQQKQLQIQPWVRVASLLAGAAGDVHDIGKASIHFQNKLKSSEIIKDEVRHEWLSMKLLQNMRKNNWDWQNAWNGIENNISELSLGDRTKLDKQSILNELEAVDFLVVSHHGLLGASNLNPNASLHVRTQTSISNPQITCAGDIDQRIFKSHQARMTRVQKLIISDTAKSQTYWKALTLHARAALIFADHTVSAREYSNHTSENVGLFANSKLKKHENGDLKRSLDQPLDWHLQNVGDRASYIAVKMMTDLNLTGLSEQSVEYICQPARNERFNWQNKVANALQKQMTKHPDIPSLIFNIAGTGSGKTRMNLRAACILRPNDPRIAIALNLRSLTLQTGEALKSSMNLSEDEIAVIIGDKVTQQLFNQRSKNDAGIDDDENLAEPIFDSEWGEGNILPEWLNPLYQKTSKGRTGLDRQAQTVLASPLLVSTIDYLIAAGEPHRQGHHVKALLRLMSSDLILDEIDGYEPKSLIAVLRLVQLSAMYGRNVICSSATLSETVAKTIYRAYESGIEMREALNAQPEQNNCQKFLVAITDNELNPKIWVQDIQQHADFDRQYQQHLNDLQTVLTEKARTPYRIAKLATIEHPDVDNWKKSILESVQSLHTSHGWNFKNTDKKLSFGLVRVANIKHAIALAKYLSVHLSHARIACYHANDWLISRFYKEQRLDFLLTRHPNKQKRLSGNEHIQQDEEINTILKNSESDDVPFIVIATPVEEVGRDHDFDWAVIDASSIQSIVQTAGRVNRHRLNVIDTPNIVIPQFNYRYCENNDQPKKQKKAVFKWPGYEAYGSSSKEHIYKIQDIEKLIPWNTQHEVVINACLRFDQNSCKFAEYDDAQIQKFCEDYFYPSKYQYFANSKVPAFLLAEEIYDETALRDIQKQEVYVFDVEDDDLKIKHTDLHHVQFDPATGKYIPSIKTMSFIVEEAPQNAWLANSPAGLVQLCREQNIQVEEGCKVSLAVYPNQVPEWIYHYGFGIYSE
>NZ_LR782267.1|WP_174506403.1|2114446_2115262_-|hypothetical-protein
MSLSASIVDPKLFSEKDKMKLVNELYHVHDKIFDGVDKNQFTNYVINSKANITNIFIQKYQDQAVGYGAIHFYKFDTFDDRIGVIRMEAGFMPKFRSGNNQFHFFALLKVIEFIISHPNRKIYFLGSLVHPSSYVALTNLSKQVWPTMATPLPNEEIKTIVNRLSDLFDLTPVESSNPHVVKVGWKTRETENSRHEWSNITKSSAQFYLQQNPDYKEGHGLITILPINMKNVLDIGIALVNKKQKKAVKNFWMQSKLNPAALKKKVQPSIA
>NZ_LR782267.1|WP_174506402.1|2112700_2113879_-|hypothetical-protein
MNIELKIAFYFSVFIILMMPICIFIQIIIKKYLYVGKDLAFLKKNRETPVDKKLLIDTNPIQDAEHVQFNKPPVSVDQETSKENQTPEIRYPRRSLASVSSDQVTRSIKLKRPVLKMDVKAHPMSTTSDQQEIVQKADLAVNVAAADTKEPVLENLSQETESAVTTKSYISESLEQKEQGLLAQPEYVKNINEDNQSSIIALLEEQQPVIEPTLINKVEKEAEADIVEPLVMQDSLLLNSVEQIGTDSDDEINPLDKSGSIRASVITQEVAVENNLLIEQTGNNDDASIVSMTHERTEQNTETEDTGNIKDADELLSGTELADMFEVFNISSQQNEHQLSHEYDEGTDIKKEDSITAECVKNNEMKDVSSREDDVEHQQILDTYQKIAAMYK
>NZ_LR782267.1|WP_174506401.1|2111936_2112665_-|hypothetical-protein
MSLAKNSIHIVTQAKGGVGKSFISRLLIQYLRERMSVFCFDADPLNDGLVSFKGLNAHKLETKLLNGNLDSRSYYDPMFETILLKDSCFLIDSGSSTHINFINYIKGSDILNLFKEENRKIYFHVPLAGNQDFNDCYRELIKLAQLFPGNSFVVWENEFHGDLEQDYKVDQSYKSLSNIIGHVELKNLQSSPLLYDIEMMNKEKLLFNEIEENSDFFGAIIRRRLMLYKESIYKQLNDIFSD
>NZ_LR782267.1|WP_174506408.1|2125465_2126728_-|RND-transporter
MIREHKKRPIPDLAFIHHSILAITTCACIAFSAMTYAAPANTPKLDLTLSAYSTNKIKKLLNDPKTWQKIPQKVTLCVYSPNGPNGEAFEQATSYISELPRISQVAKDFGVNMNVVRPSKLQINIDIDYPKLKQKASTQVSLKVYTDERVLTEDFRAQKCDGAGISNIRARQFNSFVGSIDAIGAVQNYKQLSSVIQLLARPEFDNKMVNKDYEVVGVVPLGAAYIMVTDRRIDSLAKAAGKKVAVMNFDGTQKKLVQNVGAQPVTVDLTSVGGKFNNKEIDVMAGPALLFDPLELHKGMQDKSGNVVGGIIRFPIVQLTGVLIMHRGKFPVGMGSVAREIISKQLSPAFQFVDKLEKQIPAKYWMDIREADKPGYIRIMREARIQMTKEGYYNPEMMKILKKIRCAQNPGNFECSLADE
>NZ_LR782267.1|WP_174506409.1|2126994_2128392_-|amino-acid-permease
MNNHNNGTQKLGEGLSNRQIMMISIGGVIGAGLFIGSSAAISKAGPAVIISYALTSLLVFLVMRMLGEMAVLQPDTGSFSTYATRAIGPWAGFTIGWLYWWFWVLVIPVEAIAGAEILHTWFPSVPGWFYAFALVVLLTISNLFNVKSFGEFEFWFSLIKVIAIIIFIVIASLAVFGFWPLANVSGVGNLFSHGGFMPNGLGGVLGGILITAFSFFGVEILSIAAAEAKNPQEKIRKATNMVIYRIVLFYVLSIFLAVSLVNWNSTGFKEMGTFQYVLMTLNVPYTKLIMDAVVFVAVASCLNAALYTSSRMLFSLGTRQDAPQAVTRISKSSVPQVAVVASSIVGIGGCIANYLYPGQVLTFLLSTTGAIALLVYLVIAISQLRLRKDLEKQGVKIDFKMWCFPWLTWIVIFIILAVLGYMFISPDYSYETSLSLSVTFIVLFFSVVVSYRKKHAIRRSRVYER
>NZ_LR782267.1|WP_174506410.1|2128824_2130156_-|aspartate-aminotransferase-family-protein
MINTQGTDHLNLQAHWMPFSSNRNFHKDPRMIVSAKDQWLVDADGRQVYDSLSGLWTCGLGHCLPEIQSSVAKQLEKLDYSPAFQFAHPLSFQLAEKIIQHMPAGLNHVFFTDSGSEAADTALKMAKAYWRIKGQPTKTKLIGRARAYHGVNIGGTSLGGIGGNRKMYGDLMNVDHLPHTLQKDQVFTKGMAETGGVALADEMLKLIELHDASNIAAVIVEPVSGSAGAIVPPKGYLKRLREICDQHNILLIFDEVITAFGRMGTWTASEYFDVKPDLLNFAKQVTNGAIPLGGVVASEEIYQTFMQQDIAEHLVEFTHGYTYSAHPVACAAGLATLNVLKQRDVMGQVQALIPQFEDKIHQLKGIPHILDIRNCGLIGAIQLAARDGDTSIRAFETGMKLWKAGFYVRFGADTLQFGPMFNASAQDLDRLMNAVGEHLYQLD
>NZ_LR782267.1|WP_174506411.1|2130251_2131172_+|LysR-family-transcriptional-regulator
MKTKKLNQVTDFDIKLLKIFKTVSETGSFTAAESLLGISRSAISLHMSDLEKRLGVRLCQRGRAGFSLTHEGQEILNYTDTLIASIEDFRLKVNQIHKKLKGDLNIGIINNLVTMPKSYITHTLKQLTQESSEVQVNISMSTLADIECKVMDGRLHLGAIPLVTPLSGLDYFDLYAEQSFLYCGKDHPLFEKELELSHSDLHEWNAVMPSYTLSPKALQLYQNLNCTATASDREGIAFLILTGNFIGFLPDHYAKKWVKSSDMKPLFIESFHYDTRICLVTSKGKKHNMIVESFFEKITDIITQNK
>NZ_LR782267.1|WP_121972629.1|2131356_2132592_-|MFS-transporter
MLWFRELNKTEKKTFIGAFGGWAIDALDFMVFTFVISTLITLWGIDKSQAGMLGTVTLLFSAIGGWGAGILADKYGRVKILQYTILWFSVCTVLIGFAQNFEQIFILRALQGLGFGGEWAVGSVLMGEIVRSQHRGKAVGTVQSGWAIGWGVAAILYTIAFTVFPPEIAWRTLFWIGVFPALLILFIRKHVPEPEVFKQTKQAAGTTKVSFWEIFSPRLVKNTLLTAILCTGVQGGYYAITTWLPTYLKTERGLSVLNTGGYLGVIIFGSFVGYITGAYMTDKFGRKANLLIFSVLSCLSVYFYTQFQLTNELMLLLGFPLGFAASGIFSGLGAYLTELFPNELRANGQGFAYNFGRGIGALFPTLVGFLAQNNGLGWAIGVFAGGAYFVVIVITLFLPETKGRDLFQNQS
>NZ_LR782267.1|WP_174506412.1|2132609_2133479_-|amidohydrolase-family-protein
MDYCLSPLEHFQKINFLVPEGACDTHAHVVAEDIEKYPMVDTRSYTPRPATEQDYFKMLKQTGMSRGVLVQISVYGTDNRYMLEVLSRYPDQLRGIAVVDADISENELERMHQLGVRGLRINVLFGGGIGFAAMERLADKIKSFGWHMQFLMDAADIPELMPRLQKLPVIGVVDHMGHTPVSSGLESPAMKGLTHLMEEHGWWVKLSGAYRIGDNFPNFMDVNQWARKLYQTAPEQCVWGSDWPHVALTQMPDTGALLNQLELWLPTEQDRKKVLVDNPQKLYGFPAMT
>NZ_LR782267.1|WP_174506413.1|2133967_2136895_-|heavy-metal-translocating-P-type-ATPase
MSGQQKTSCCSGHGSTLTLVRNDPVCGMCVSEDSTHFSEYKEKKYLFCCQGCKQKFEQNPQSFLQEKTQISEGCGCSKHKESSMDSGSAQDLHHFKKDEKAHCCGGKNTGHHSHKHLNDAAIFMPVTTNFKANTVETVTDPVCGMQVKTDSQYHSVYQDKNYYFCSENCQNKFNTNPAQYIKTEVKSSCCGSDKKVEVKTSGCCGGHEHNHHDHSQHAHHQTHTAIDPVCGMSVDTSTDLKTDYEGKTYYFCNPSCLHKFQNDPEPYLIPHDQRAVPEGMDDVLFTCPMDPEIVQKGPGTCPICGMALEPMQPSLDEGPNPELVDFSNRFWKTLPLTLIVFVLAMGSHIHAFISPHIQPWIELVLSIPVVLWAGLPFLQRCWISYKTWHLNMWSLIGVGILAAFIYSVVATVFPSLIPAQAKTGHGVAVYFEAACMIVSLSLLGQIMELKARSKTADSLRALLKLQPNTAKRIEDGQVVEVEISDVKEGEILQISSGEQIPLDGIVIEGKTYVDESMMTGEPAAVKKEMNDKVIGGTVNQQGSIRIQTTAVGTNTILAKMIQVVADAQRSKAPLQKMADVVAKYFVMIVLGISVITFIAWMVSGASFDLALMCAVSVLIIACPCALGLATPMSVMATTGRAAQKGVLFKDAEAIEALSKVDVVVVDKTGTLTEGKPGVSEIEVLSSNLDQSHAELWIASVEQYSTHPIAETLTRLVSPEQLLAAQDFEDVTGFGVKGRLQNQMLYVGSQKLLDNLGLKIDADHSHKIDQLRSQGNALSFLANEHEVLAYIAIKDAIKASAKQVIDQLHADGIEVVMATGDHEQNAQLVADELGIQQVYGNCDPTEKLSIVQKYQAQGKVVAMAGDGINDAPALAQADVGIAMGTGTDIAKQTAQVTLVKGDIRGVADALHMAKQGVKNMKQNLGFSFIYNGLGVPVAAGIFYPVLGILLTPMFAAVAMSLSSLSVVLNALRLNRS
>NZ_LR782267.1|WP_121972626.1|2136978_2137356_+|MerR-family-transcriptional-regulator
MLTIGKLAKQCHLNVETIRYYQRIGLMRIPETTANYRYYNDQDIETLSFIQKAKDAGLQLSEIQELLHLELDDREKVRHVIEQRLEKIDQRIRELQSLKVRLSTWIDECKTTTDTCCPILKALKQ
>NZ_LR782267.1|WP_174506414.1|2137402_2138008_+|5-formyltetrahydrofolate-cyclo-ligase
MKISKQSHELRKQLRKKRRNISRFQQKQTEQIIWSKLIHSSKFIHSHKIGIYLDAFGEVQTKKIIEYCFSHHKQVYLPMICNMNNKLVWVKITQHQYRSKRFSYHRLGMLEPMASRGFNVNHLDLLIMPLLACDTSGTRMGMGGGFYDRTLATALTKPFRLGLAHDFQLLHENLIRNKWDQALDALLVPHHFYIFKRQMSQ
>NZ_LR782267.1|WP_174506415.1|2138143_2140570_+|endopeptidase-La
MSEIIMNEKTLEPQVPSVLPLLALRDVVVYPHMQIALFVGREKSINAVDVARNSDNLVFVVAQKDSLTEEIDHDNLYQYGTVAKIVQVVNHENDENCIKVLIEGLHRSKLEKIIDNGEYLTAEHKLSPMTVSLDKDTKDTRVQELRALFSQYAEAKLRNARELIAAANKIDDLLQLVFFVATRVPLNIDIKQKFLEHDEFEAHLQELMTYLLQQSEEQQIEQTLHDSVKRQMEKNQREYFLNEKMKVIQRELSDMNGGAEDDVAEIEKRLSEADLPEHVRKKAEAEFRKLKAMQPASSEAAVVRNYLEVILDTPWNKASKVSINLAKAQEILDSDHYGLDEVKERIVEYLAVQSRVKKLKGPILCLVGPPGVGKTSLGESIAKATGREFVRMALGGVRDEAEIRGHRRTYIGAMPGKIVQSLTKVGVKNPLFLLDEIDKMAQDYRGDPASALLEVLDPSQNNKFNDHYLDLDLDLSEVMFICTANSMNIPEALLDRMEVIRLPGYTEDEKVNIAERYLVPKAIKNNGLRAKELTVHEEAIRDIVRRYTREAGVRSLEREVSKIARKVVKESVSKKAKNLHIDITAENLPEYLGVHKFDYGMAETEAQVGRVNGLAWTSVGGELLTIEVAAVPGKGKFITTGSLGDVMKESITTAMTVVRTRADELGIEASRFEETDVHVHLPEGATPKDGPSAGLALTTALVSAFTGIAIRPDIAMTGETSLGGRAMRIGGLKEKLLAAHRGGVKLVFIPQENVRDLAEIPQNVKDGLEIKAVKSIDDILPLALVEAPKPLVKAPIVKAVDEGKAARH

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Crispr_ID: NZ_LR782267_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR782267_5

3720208-3721496

Unclear

Consensus_repeat	Method
CTTCTAAACCATCTACACGATGGTGAAC	CRISPRCasFinder
CTTCTAAACCATCTACACGATGGTGAAC	CRT
GTTCACCATCGTGTAGATGGTTTAGAAG	PILER-CR

21 spacers

cas3

The CRISPR arrays of NZ_LR782267_5

>merge|NZ_LR782267|5|3720208-3721496|CRISPRCasFinder,CRT,PILER-CR
TTTTAAAACCATCTACACGGTGGTGAACGTAAATGGTTTCCAAAATTTACAGTTCCATAACTTCTAAACCATCTACACGATGGTGAACACGAATGTCTGTGGTGTCGTCTGAATCAATTCCTTCTAAACCATCTACACGATGGTGAACGTTCAGGAATAGAAAGTTTAAAAACGGATGCACTTCTAAACCATCTACACGATGGTGAACATTAATACGGTTGCTGATCTGGTTGCTGTATTCTTCTAAACCATCTACACGATGGTGAACGTCATTATCATCATTATAAAAACTTTGGTAATCTTCTAAACCATCTACACGATGGTGAACCTTATATATGGATAAAAAAGGTGGCACATACTCTTCTAAACCATCTACACGATGGTGAACGACGGGTACGCGAACCCGGACATCATTTTGATCTTCTAAACCATCTACACGATGGTGAACTTATATCAATATCTGGTAAAGAGTATGGCTCGCTTCTAAACCATCTACACGATGGTGAACTGTGGCAGTGCTTATCTTTGCCGGTTTGTGTTCTTCTAAACCATCTACACGATGGTGAACGATCAGGCGGAAATTCAATTTGATCACGTAGTCTTCTAAACCATCTACACGATGGTGAACTGCAACATTGCAAAGGAAAGGTCATTTTATGTCTTCTAAACCATCTACACGATGGTGAACTGATCAGGCGGAAACTCGATTTGATCGCGGAGCTTCTAAACCATCTACACGATGGTGAACTATTAAACCCTAGAACTGTACGTCTAGGACCACTTCTAAACCATCTACACGATGGTGAACTGAATGAAAGATTCCGACCTTGTAGCTCTCTTGCTTCTAAACCATCTACACGATGGTGAACATTCATCAGTAGGCTGTACCGAAAAAGTAAACCTTCTAAACCATCTACACGATGGTGAACTAGTAGCGACGAACGTGTTAAGCGACGTGACCCTTCTAAACCATCTACACGATGGTGAACTTGAGTTGCAAGCGGCTCAAGTTTTACAAACACTTCTAAACCATCTACACGATGGTGAACAGTTAGCAAATCCACTCGATGCGTGTCGGCTTCTTCTAAACCATCTACACGATGGTGAACTGAAGTCCTATCATGCAGGGTTAAAACGAGGACTTCTAAACCATCTACACGATGGTGAACTGCCAGTTGCCCGAATAAATGCCAGTTTTGGTCTTCTAAACCATCTACACGATGGTGAACATTATATTGAAAACCCTGCTTCAAATCCGAATCTTCTAAACCATCTACACGATGGTGAAC

>NZ_LR782267|5|5|3720208-3721496|CRISPRCasFinder
TTTTAAAACCATCTACACGGTGGTGAAC	GTAAATGGTTTCCAAAATTTACAGTTCCATAA
CTTCTAAACCATCTACACGATGGTGAAC	ACGAATGTCTGTGGTGTCGTCTGAATCAATTC
CTTCTAAACCATCTACACGATGGTGAAC	GTTCAGGAATAGAAAGTTTAAAAACGGATGCA
CTTCTAAACCATCTACACGATGGTGAAC	ATTAATACGGTTGCTGATCTGGTTGCTGTATT
CTTCTAAACCATCTACACGATGGTGAAC	GTCATTATCATCATTATAAAAACTTTGGTAAT
CTTCTAAACCATCTACACGATGGTGAAC	CTTATATATGGATAAAAAAGGTGGCACATACT
CTTCTAAACCATCTACACGATGGTGAAC	GACGGGTACGCGAACCCGGACATCATTTTGAT
CTTCTAAACCATCTACACGATGGTGAAC	TTATATCAATATCTGGTAAAGAGTATGGCTCG
CTTCTAAACCATCTACACGATGGTGAAC	TGTGGCAGTGCTTATCTTTGCCGGTTTGTGTT
CTTCTAAACCATCTACACGATGGTGAAC	GATCAGGCGGAAATTCAATTTGATCACGTAGT
CTTCTAAACCATCTACACGATGGTGAAC	TGCAACATTGCAAAGGAAAGGTCATTTTATGT
CTTCTAAACCATCTACACGATGGTGAAC	TGATCAGGCGGAAACTCGATTTGATCGCGGAG
CTTCTAAACCATCTACACGATGGTGAAC	TATTAAACCCTAGAACTGTACGTCTAGGACCA
CTTCTAAACCATCTACACGATGGTGAAC	TGAATGAAAGATTCCGACCTTGTAGCTCTCTTG
CTTCTAAACCATCTACACGATGGTGAAC	ATTCATCAGTAGGCTGTACCGAAAAAGTAAAC
CTTCTAAACCATCTACACGATGGTGAAC	TAGTAGCGACGAACGTGTTAAGCGACGTGACC
CTTCTAAACCATCTACACGATGGTGAAC	TTGAGTTGCAAGCGGCTCAAGTTTTACAAACA
CTTCTAAACCATCTACACGATGGTGAAC	AGTTAGCAAATCCACTCGATGCGTGTCGGCTT
CTTCTAAACCATCTACACGATGGTGAAC	TGAAGTCCTATCATGCAGGGTTAAAACGAGGA
CTTCTAAACCATCTACACGATGGTGAAC	TGCCAGTTGCCCGAATAAATGCCAGTTTTGGT
CTTCTAAACCATCTACACGATGGTGAAC	ATTATATTGAAAACCCTGCTTCAAATCCGAAT
CTTCTAAACCATCTACACGATGGTGAAC

>NZ_LR782267|5|4|3720208-3721496|CRT
TTTTAAAACCATCTACACGGTGGTGAAC	GTAAATGGTTTCCAAAATTTACAGTTCCATAA
CTTCTAAACCATCTACACGATGGTGAAC	ACGAATGTCTGTGGTGTCGTCTGAATCAATTC
CTTCTAAACCATCTACACGATGGTGAAC	GTTCAGGAATAGAAAGTTTAAAAACGGATGCA
CTTCTAAACCATCTACACGATGGTGAAC	ATTAATACGGTTGCTGATCTGGTTGCTGTATT
CTTCTAAACCATCTACACGATGGTGAAC	GTCATTATCATCATTATAAAAACTTTGGTAAT
CTTCTAAACCATCTACACGATGGTGAAC	CTTATATATGGATAAAAAAGGTGGCACATACT
CTTCTAAACCATCTACACGATGGTGAAC	GACGGGTACGCGAACCCGGACATCATTTTGAT
CTTCTAAACCATCTACACGATGGTGAAC	TTATATCAATATCTGGTAAAGAGTATGGCTCG
CTTCTAAACCATCTACACGATGGTGAAC	TGTGGCAGTGCTTATCTTTGCCGGTTTGTGTT
CTTCTAAACCATCTACACGATGGTGAAC	GATCAGGCGGAAATTCAATTTGATCACGTAGT
CTTCTAAACCATCTACACGATGGTGAAC	TGCAACATTGCAAAGGAAAGGTCATTTTATGT
CTTCTAAACCATCTACACGATGGTGAAC	TGATCAGGCGGAAACTCGATTTGATCGCGGAG
CTTCTAAACCATCTACACGATGGTGAAC	TATTAAACCCTAGAACTGTACGTCTAGGACCA
CTTCTAAACCATCTACACGATGGTGAAC	TGAATGAAAGATTCCGACCTTGTAGCTCTCTTG
CTTCTAAACCATCTACACGATGGTGAAC	ATTCATCAGTAGGCTGTACCGAAAAAGTAAAC
CTTCTAAACCATCTACACGATGGTGAAC	TAGTAGCGACGAACGTGTTAAGCGACGTGACC
CTTCTAAACCATCTACACGATGGTGAAC	TTGAGTTGCAAGCGGCTCAAGTTTTACAAACA
CTTCTAAACCATCTACACGATGGTGAAC	AGTTAGCAAATCCACTCGATGCGTGTCGGCTT
CTTCTAAACCATCTACACGATGGTGAAC	TGAAGTCCTATCATGCAGGGTTAAAACGAGGA
CTTCTAAACCATCTACACGATGGTGAAC	TGCCAGTTGCCCGAATAAATGCCAGTTTTGGT
CTTCTAAACCATCTACACGATGGTGAAC	ATTATATTGAAAACCCTGCTTCAAATCCGAAT
CTTCTAAACCATCTACACGATGGTGAAC

>NZ_LR782267|5|5|3720268-3721496|PILER-CR
CTTCTAAACCATCTACACGATGGTGAAC	ACGAATGTCTGTGGTGTCGTCTGAATCAATTC
CTTCTAAACCATCTACACGATGGTGAAC	GTTCAGGAATAGAAAGTTTAAAAACGGATGCA
CTTCTAAACCATCTACACGATGGTGAAC	ATTAATACGGTTGCTGATCTGGTTGCTGTATT
CTTCTAAACCATCTACACGATGGTGAAC	GTCATTATCATCATTATAAAAACTTTGGTAAT
CTTCTAAACCATCTACACGATGGTGAAC	CTTATATATGGATAAAAAAGGTGGCACATACT
CTTCTAAACCATCTACACGATGGTGAAC	GACGGGTACGCGAACCCGGACATCATTTTGAT
CTTCTAAACCATCTACACGATGGTGAAC	TTATATCAATATCTGGTAAAGAGTATGGCTCG
CTTCTAAACCATCTACACGATGGTGAAC	TGTGGCAGTGCTTATCTTTGCCGGTTTGTGTT
CTTCTAAACCATCTACACGATGGTGAAC	GATCAGGCGGAAATTCAATTTGATCACGTAGT
CTTCTAAACCATCTACACGATGGTGAAC	TGCAACATTGCAAAGGAAAGGTCATTTTATGT
CTTCTAAACCATCTACACGATGGTGAAC	TGATCAGGCGGAAACTCGATTTGATCGCGGAG
CTTCTAAACCATCTACACGATGGTGAAC	TATTAAACCCTAGAACTGTACGTCTAGGACCA
CTTCTAAACCATCTACACGATGGTGAAC	TGAATGAAAGATTCCGACCTTGTAGCTCTCTTG
CTTCTAAACCATCTACACGATGGTGAAC	ATTCATCAGTAGGCTGTACCGAAAAAGTAAAC
CTTCTAAACCATCTACACGATGGTGAAC	TAGTAGCGACGAACGTGTTAAGCGACGTGACC
CTTCTAAACCATCTACACGATGGTGAAC	TTGAGTTGCAAGCGGCTCAAGTTTTACAAACA
CTTCTAAACCATCTACACGATGGTGAAC	AGTTAGCAAATCCACTCGATGCGTGTCGGCTT
CTTCTAAACCATCTACACGATGGTGAAC	TGAAGTCCTATCATGCAGGGTTAAAACGAGGA
CTTCTAAACCATCTACACGATGGTGAAC	TGCCAGTTGCCCGAATAAATGCCAGTTTTGGT
CTTCTAAACCATCTACACGATGGTGAAC	ATTATATTGAAAACCCTGCTTCAAATCCGAAT
CTTCTAAACCATCTACACGATGGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR782267.1\|WP_174507307.1\|3723802_3724444_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_LR782267.1\|WP_174507308.1\|3724668_3726714_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_LR782267.1\|WP_174507312.1\|3732397_3733636_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_LR782267.1\|WP_174507309.1\|3726748_3727555_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187576
NZ_LR782267.1\|WP_121972759.1\|3716147_3716966_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213228
NZ_LR782267.1\|WP_121972776.1\|3722824_3723418_+\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|129813
NZ_LR782267.1\|WP_174507305.1\|3719471_3720188_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|378033
NZ_LR782267.1\|WP_174507310.1\|3727732_3728266_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_LR782267.1\|WP_121972762.1\|3712048_3712879_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_LR782267.1\|WP_174507304.1\|3710011_3711919_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_LR782267.1\|WP_121972760.1\|3713864_3715712_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_LR782267.1\|WP_174507311.1\|3728412_3730992_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsB	unknown	unknown	gnl\|CDD\|235325
NZ_LR782267.1\|WP_121972753.1\|3721653_3722667_-\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213369
NZ_LR782267.1\|WP_121972758.1\|3716962_3717742_+\|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE	unknown	unknown	gnl\|CDD\|223838
NZ_LR782267.1\|WP_174507306.1\|3723414_3723810_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240046
NZ_LR782267.1\|WP_121973196.1\|3731284_3732154_+\|acyl-CoA-thioesterase-II	unknown	unknown	gnl\|CDD\|224857
NZ_LR782267.1\|WP_121972755.1\|3719097_3719385_+\|toluene-tolerance-protein	unknown	unknown	gnl\|CDD\|132914
NZ_LR782267.1\|WP_121972757.1\|3717741_3718425_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	unknown	unknown	gnl\|CDD\|275223
NZ_LR782267.1\|WP_121972756.1\|3718446_3719082_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|377516
NZ_LR782267.1\|WP_121972777.1\|3709093_3709696_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|234745

Protein	Function_ID	Function_description	E-value
NZ_LR782267.1\|WP_174507307.1\|3723802_3724444_-\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	2.34358e-35
NZ_LR782267.1\|WP_174507308.1\|3724668_3726714_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_LR782267.1\|WP_174507312.1\|3732397_3733636_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	7.55602e-114
NZ_LR782267.1\|WP_174507309.1\|3726748_3727555_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.33171e-52
NZ_LR782267.1\|WP_121972759.1\|3716147_3716966_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213228	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.3333e-140
NZ_LR782267.1\|WP_121972776.1\|3722824_3723418_+\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	1.78939e-56
NZ_LR782267.1\|WP_174507305.1\|3719471_3720188_-\|DNA-alkylation-repair-protein	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	7.96078e-64
NZ_LR782267.1\|WP_174507310.1\|3727732_3728266_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	7.4893e-42
NZ_LR782267.1\|WP_121972762.1\|3712048_3712879_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	6.30641e-112
NZ_LR782267.1\|WP_174507304.1\|3710011_3711919_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_LR782267.1\|WP_121972760.1\|3713864_3715712_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	6.77275e-145
NZ_LR782267.1\|WP_174507311.1\|3728412_3730992_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsB	gnl\|CDD\|235325	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB.	0
NZ_LR782267.1\|WP_121972753.1\|3721653_3722667_-\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213369	cd12835, EcCorA-like_1, Escherichia coli Mg2+ transporter CorA_like subgroup. A bacterial subgroup of the Escherichia coli CorA-Salmonella typhimurium ZntB_like (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subgroup includes the Mg2+ transporters Escherichia coli CorA and Salmonella typhimurium CorA (which can also transport Co2+, and Ni2+). Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.10557e-131
NZ_LR782267.1\|WP_121972758.1\|3716962_3717742_+\|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	7.50973e-83
NZ_LR782267.1\|WP_174507306.1\|3723414_3723810_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240046	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.00678e-39
NZ_LR782267.1\|WP_121973196.1\|3731284_3732154_+\|acyl-CoA-thioesterase-II	gnl\|CDD\|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	1.19135e-113
NZ_LR782267.1\|WP_121972755.1\|3719097_3719385_+\|toluene-tolerance-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	3.84904e-05
NZ_LR782267.1\|WP_121972757.1\|3717741_3718425_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	gnl\|CDD\|275223	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD. Members of this protein family are the MlaD (maintenance of Lipid Asymmetry D) protein of an ABC transport system that seems to remove phospholipid from the outer leaflet of the Gram-negative bacterial outer membrane (OM), leaving only lipopolysaccharide in the outer leaflet. The Mla locus has long been associated with toluene tolerance, consistent with the proposed role in retrograde transport of phospholipid and therefore with maintaining the integrity of the OM as a protective barrier.	8.41667e-46
NZ_LR782267.1\|WP_121972756.1\|3718446_3719082_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|377516	pfam05494, MlaC, MlaC protein. MlaC is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. This family of proteins is involved in toluene tolerance, which is mediated by increased cell membrane rigidity resulting from changes in fatty acid and phospholipid compositions, exclusion of toluene from the cell membrane, and removal of intracellular toluene by degradation. Many proteins are involved in these processes.	1.465e-39
NZ_LR782267.1\|WP_121972777.1\|3709093_3709696_-\|GTP-cyclohydrolase-II	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	2.34345e-124

>NZ_LR782267.1|WP_174507305.1|3719471_3720188_-|DNA-alkylation-repair-protein
MIQQILANIRNDLNLLGDETVRKTSQRFFKKDQKVNFYGIKNADVKKIIKKYKKPVLILSKKQILELCESLLKTNYIEEAGIAFAFTEMIGEQFEPSDINLFENWINLYINNWATCDTLCNHTIGNFIIQYPELISELKKWTNSSNRWMKRAAAVSLIIPARNGLFLNDIFEIANSLINDSDDMVQKGYGWMLKAASQTHPNEVFLYVLSKKEIMPRTAYRYAIEKLPKEQKEIAMRK
>NZ_LR782267.1|WP_121972755.1|3719097_3719385_+|toluene-tolerance-protein
MIEFNNQELKVSGKIDFDNAENYFLNGLKIIQNEKNFPITVDLAKLEHGSTVTLAVFVQWLRHTPNKQGLVFRNIPEKMMKIIQSCHLEHDLELI
>NZ_LR782267.1|WP_121972756.1|3718446_3719082_+|ABC-transporter-substrate-binding-protein
MNVLLKQTLTASVLSTMIAGTVFAAPSETPPAFVKRVADGLISSLKANHAQLQNNKAAVSAIVRKNLDPYVDAQAFTRIVMGTYASNQNSTAAQRAQFEKNFRATLIENYGSAFAKYTNQTYVMRPYKETGSKFPVVTIDFNNNGEKIPVSFQLADNGSQWKVRNINVSGIDLGLQFRNQFAANVKRNGGNIDKAIATFKPDADAAVNQKK
>NZ_LR782267.1|WP_121972757.1|3717741_3718425_+|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD
MKSRTSELAVGIFVIIFGVALFFLAMKVSGLVGTNMKDSYSMNATFDNVNGLKPRAKVTMSGVTIGRVENITLDPVTRLAKVNFDLDGRLTTFNAEQLKTVQKNALEDLRYSSDYQSAAPAQQKEMEQKLISNMKSITNIDEDAYIMVATNGLLGEKYLKIVPGGGLNYLKRGESIGNTQGTMDLEDLITKFITGGAGKSTSDGSVGSKDASSASTETTDAETSFTE
>NZ_LR782267.1|WP_121972758.1|3716962_3717742_+|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE
MNAIALLGRRVIERVKGIGVATIMLLQILCSMPTWIGVKLFIYQMYRVGVLSLLIIAVSGLFIGAVLGLQMYNILVTFGSESMLGTAIALTLLRELAPVVAALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVVSPRLWAGIFSLPMLSVIFAAIGIVGGKMVGVDFLGADDGSFWSGMQNSVRFGHDIFNGTIIKSIVFALICTWIAVYQGYACEPTSEGIATSTTRTVVYSSLCVLGFDFVLTAVMFGGV
>NZ_LR782267.1|WP_121972759.1|3716147_3716966_+|ABC-transporter-ATP-binding-protein
MNNSSPQNTQELIEVKNLSFNRGERIIYDNISLKIRRGQITAIMGPSGTGKTTLLRLIGGQLTPDQGEVLLDGKNIVDMSRAELFAARARMGMLFQSGALFTDMSVYENVAFPIRAHTKLPENIIAELVALKLESVGLRGAENLMPSELSGGMNRRVALARAIALDPDLIMYDEPFAGQDPIVMGVLTRLIRSLREALDLTTIIVSHDVDETLSIADYIYVVAEGKIQGEGSPADIKAHASPFVQQFLTGAAEGPVDYQFSHQAYLDSEVRS
>NZ_LR782267.1|WP_121972760.1|3713864_3715712_+|DEAD/DEAH-box-helicase
MSKTFAEFPLHESLQKALESLGFTSPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTLNALTGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIALVRHMKGVRIAAIMGGMPFGKQIQQLKGAQVVVATPGRLLDLVNRRQIKLDKVNALIVDEADRMLDLGFSEDLEAISDLAANRTQTLMFSATFADRIISLAERMMNDPERIAIETGHSTNTDITQTLHWTDGFEHKKKLLSHWLNEEDVDQAVVFASTQEDTDMLAEELSEAGHSVVALHGAMPQTVRNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGKAITLATYRERGKIRALEDYLETRLNVSEIEGLEPSPPPARSGRGGRDGGRGNGGRRDGGRGRGGFGGGRRFEGESNFKRREGGHDGERRRFDDKPRGERSFGGEDRPRREFNSDRPRREGGFEDRPKRSFGGEDRPRREFNSDRPRREGGFGDRPQRSFGGEDRPRREFNSDRPRREGGFNDKPRFDSNDDNRGNRVDYKPRREGGFGDRPKRSFSEDRPRREGGFGDRPKRSFGGEDRPRREFNSDRPRREDGERRRKFND
>NZ_LR782267.1|WP_121972762.1|3712048_3712879_+|inositol-monophosphatase
MEPMVVMAARAAQLVGQELLKAHQNRHKLDLQVEEKGIDGPVTRVDRYIEQLTIDTLRKSYKNHSFLGEEFGMQEGKGHDADWCWVIDPLDGTLNFINGFPHFCVSIAVQHKGVTQHGVIYDPVKDELFSASRGRGAMMNQRRIRVNVKDSLENTFLAVGHAYRAKRNGEVISYAKNHFESLLNVTEAGAQYRRGGSAALDLAYVAAGRFDGYFELGLKPWDIAAGELIVKEAGGTVVDARGGSDSMDNGQVLACSMKMLKPLMQAVVPAWGEAAK
>NZ_LR782267.1|WP_174507304.1|3710011_3711919_+|1-deoxy-D-xylulose-5-phosphate-synthase
MLYTEIPSQRPVTPLLDKIDHPQQLRELEQSQLATVADELRQYILYAAGQSGGHFGANLGVIELTVALHYCFNTPRDRLVWDVGHQSYPHKALTGRRESLTTIRAKDGLAAFPAREESEFDTFGVGHSSTAISAGLGMALARHYQNDPCEVVCIVGDGAMTAGMAFEAMNDAVAHDADLMVVLNDNDMSISCSTGGFARHLAAIWEKGQSVNIDDQGNAFIQDHPEWSYNSRLHASATDAADNLFKAIGFDYFGPFDGHDLDQLVQVFNALKKRKGPRLIHVYTKKGKGFAPAEADPIKYHAISKITASPSNKVTAPKYSDVFGQWLCDEAAQDKRLLAITPAMCEGSGMVQFAKQYPARFFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFGIDRAGLVGEDGPTHAGAYDYAYMRTVPNIVIMAPKDENECRQMLHTAYLYNGPAAVRYPRGNGLGVEIKQELAVLEIGKAELVAEYNPGHDEQISILAFGSRVSTSITAAKNLAEQHDVGVRVINMRYVKPLDEQIIRDFADHTSIFVTVEEHAVMAGAGSAVNEFLAHAQIVKPVLNLGLPDSFMHQATHAQMLQACGLDETGIQKSIEKAWLKLIQHV
>NZ_LR782267.1|WP_121972777.1|3709093_3709696_-|GTP-cyclohydrolase-II
MPIEFVATSKLPTAFGDFKITVFQDPKTGEEHVALSKGLDTAPTGAVLVRIHSECLTGDAFGSLKCDCGPQLHSTMELINTEGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANLLLNLPADARQYDMCSIMLDHLQVKAVKLITNNPLKIKALTDLGINVVDRVPLTVGLNPYNEDYLKTKHERMSHMYQKDDF
>NZ_LR782267.1|WP_121972753.1|3721653_3722667_-|magnesium-and-cobalt-transport-protein-CorA
MLEAFYATERGSLEDATINGGFDLHPELVWIDLIAPSQEEQQWVLDAYQQNLPTLKSLEDISSSARFYRDDDGILHISTYFLTKNKNYQLDGDPEDTANMLATVQTVAFILHKERLFTMRGEKLVAFRAFRARARRNDYDIDYKDPTWILLGLLEAKLDELADILEDIHKDLEKYSTEVLNNRHREQILDLDDMITRLAQQEDMLGKAQLCLIDLRRVLTFLSRPRALGSHIFDADIRELSEDVRSLVEHDAFLFQKVRFLLDTTSGFINTEQNDTIRRFSILPSMLAPPMLIASIYGMNTEILPFAHGHWSFYVVITILIAFFIGPLIYFRWKKWI
>NZ_LR782267.1|WP_121972776.1|3722824_3723418_+|TIGR00730-family-Rossman-fold-protein
MNSIAIFCGSALGTDPIFAQIARLTGETIAKQGKTVVYGGGRSGLMGLVADSALAAGGKVIGVIPQGLVDRELAHPHLTELYIVKDMHERKTKMADFSEGFIALPGGAGTLDEIFEQWTWSQLGIHLKPCAFLNVEGFYDDLFKFIQLTTDKGFTKSRFTDSLIESDSIEKILEIFENYHAPEAKWGAIDRKELMGQ
>NZ_LR782267.1|WP_174507306.1|3723414_3723810_+|NUDIX-domain-containing-protein
MKIITVSAAVILNEQKQLLLVRKRNTEFFMQVGGKLEPEESPETTMLREIHEEIGSHANIEKFIGRFETPAANEADHLLVSYVYQVKLDQSPEINAEIAEMKWIDLDDHQTKLAPLTKSIVIPWCKKYLAS
>NZ_LR782267.1|WP_174507307.1|3723802_3724444_-|ComF-family-protein
MLKFIGEVLQTGIRKISTCQLCGVDLQQNHSLCLDCWQNLPWYRQSIERHEHKIMVACHYRFPIDRVIQKYKYENQLHYQTLLAHCLLNIRLPKVQAIVPMPISRERLIERGYNQMLVIAKILSRQLHVPIWQPVIRSAQHSQKGLSRIERLENIEQQFQINKTEINKYKKVLILDDVVTTGSSIHALTQTLENLGCTQIYAACIAAGAIKLN
>NZ_LR782267.1|WP_174507308.1|3724668_3726714_-|ATP-dependent-DNA-helicase-RecG
MADIHQLKGVGNASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLIVGRSYLLEGIVRSIDFPSGKRKSMAVLLQDDFGKVTLRFYHVYKALTDRAKAGNRLRIFGEVRVGARGLELYHPEIQLITEHTPLPKTQLTAIYPSTDGLTQPKLREYVKQALQQYSDNLPEILPKKFSNGFALKQALEYIHEPPVDANMLQLAQGSHPAQQRLIFEELVAHQISLLTRREYIRQISAPAFKPSKKFAKQLLESLPFKMTGAQKRVSKEIADDLKQNKPMLRLVQGDVGAGKTLVAGIAACHALEEGWQVALMAPTEILAEQHYLNFKKWFEPLGLNVSWLSGKQKGKAREKQEQTIKDGTANLIVGTHALFQDNVEFSKLGLVIIDEQHRFGVDQRLALRNKGVDSTTPHQLVMTATPIPRTLAMSAYGDLDTSVIDELPPGRTPIQTVTIPLDRREEVLQRIATNCADGKQAYWVCTLVEQSETLDAQAAEATYQEIRERFPHLNIGLVHGKMKADEKQAVMQQFKDNELQLLIATTVIEVGVDVPNASIMVIENAERLGLSQLHQLRGRVGRGAKASFCALLYKAPLSQNGQERLRIMRETNDGFVIAEKDLEIRGPGELLGTKQTGDMGFRVAKLERDDHLLSQAHHVAGQILKDYPENVEPLLKRWLPEAPRYAFV
>NZ_LR782267.1|WP_174507309.1|3726748_3727555_+|NAD-dependent-epimerase/dehydratase-family-protein
MHILFIGYGKTSKRVAKQLFMLGHQITTISKTLKTDDFAQHLIQDVQNLDLDQVAPIDWVYILLSPSESTAKAYQQIYVDTVQPIVQALKKHPVQKIIVVSSTRVYGENAGEIINDDSAIQPNDEQGHLLLKMEQLWQAAYPDQNIIVRPTGIYGTSIVRMIKLAENTKCYPHIHWSNRIHIDDLADFLVYLIHVEHPEKSYICSNNQPMTLHDVILWFQKQLGLAELKLESRFEMGKRIYANRMRESGFQLKHEDCFEDYQALLETL
>NZ_LR782267.1|WP_174507310.1|3727732_3728266_+|GNAT-family-N-acetyltransferase
MLKTDRLILRQWKESDYLPFIKMGLDPEVMKYFPNLLTKDESLRIIEIVKEIIDRKQWGIFAVELKENHEFIGFIGLHDQPVQFDFSPCVEIAWRLAKEYWGKGYATEGAKAVLEYAFNTLHLDKVVSFTASINKPSESVMKKIGMTKVKEFNHPEFSSAPDLEKHVLYEISKPYLP
>NZ_LR782267.1|WP_174507311.1|3728412_3730992_-|glycerol-3-phosphate-1-O-acyltransferase-PlsB
MSKNNFGQMYRQLSSKLLDLVVTPHVLGEVPSKPVQTEDISETVEKSESKKVICYVLQNYSRSNALVVDGETRRLNLTPALDPLVIGTHTEKAAVLFLQHQDETNLLNPPPHAFPPRLLRLIEQLEQHPEYEIELIPVTVLWGRSPDKEDSWFKLLFTDTWATPSKVKQLMNIGLHGRQSFLEFHEPQSLRDLVNTAKTEYPNLSPATYIISELNNYLDRQREVVLGPDLSDRRNVMQDLIKSEDVQDAIRKESIRSKISMIEAERRAIGFVNEIASDYSYSAVRFAETALTRLWTQLYDGVEVHNFSTVRELAKDYEIIYTPCHRSHIDYLLLSYVIFKRGLRVPYIAAGDNLNLPFVGQLLRGGGAFFIRRSFRGNALYTAVFKEYLYSILSRNTPLEYFIEGGRSRTGRLLPPKTGMLAMTVHGHLRGPEKPIAFVPTYIGYERLMEGSTYVGEMQGKPKESESILGILKTLRKIERIFGKVHVNFGEPVFLNDLLRAHDADHIRIESNDAPIPQEVSDAVNSSAHIILENINRAVVINPVSLLSLILLATPKHTLDEEICIKQLDTYRDLLAAEPYDERTQVTPLSGKEIIAYGLKLKLIKRVKHVLGDIIAIEDNQAVLLTYFRNNILHTFVLPSLIASLVEHNGKISRDDLVNVICTLYPFLKAELFLKWNVEQLETPICKYVDALVSAKLISLDENQNLVCPAPNSEDHNQLVVLAAPVKQSLERYYMTLALITQRGSGNISTRQVEELSHLLGQRLSVLYEFNSPEFFDKALFQSFMKVLTQQGYISTNEDGAIVFDESFKNVAQYANLVLDDVTLQMLQHITAFTDEELKEVLDAVAAEQAKKRAKRKKA
>NZ_LR782267.1|WP_121973196.1|3731284_3732154_+|acyl-CoA-thioesterase-II
MNALTQELVELLTLEKLEEHIFRGQSRNLVGKRVFGGQVLGQALRAASYTADRPANSLHAYFLYGGDVNAPIIYEVDRIRDGRSFLSRQVRAIQHGRTIFIAMVSFAKPEEGLEYQITEPEYPNPESLKSEQELKESLISFIPENVRASFMRPRWVEIRPVNPSNPFQPQPEAPFNAHYIRTYETIPADVSEISLHQSIAAFYSDFNLMTTALRPHGLNYLTPSLQIASIDHSIYFHKPFRADEWMLYDMEATVSTNSRGLNFGRMWQNGQLVCSTTQEGLMRLHEIET
>NZ_LR782267.1|WP_174507312.1|3732397_3733636_+|dicarboxylate/amino-acid:cation-symporter
MSLNTQIFIAAVLGVVFGFLLNLYPDTAFFDSSIYALTILSSIFIGLLKMLLVPLIFSSIVVGVSNLQAGGQFGRVWKITLICCLTTTTLALILGISSTHLFEVGKGMDISLFKEAMNQHQTPDTLTPGSFLTNFIQNTLINPFKAFSEGNVLAVVVFAFFVGAALVKGGEKLQGIRQLMQQFFNMMMMLVGWVMKLAPIGIFALLAKLLSTEDMSVLSRLLEFAVVVTGTTIFHGAVVLPLLLWIFGKMDPITFFKGSRTALITAFATSSSSATLPLSMQCARDNLGVRPQTAGFVIPIGSQMNMDGTALYEAAAALFIANLIGLDLSIGQQVIVCLTAMIASLGAPGIPSAGMVTMIMVLQSVGLPAEAIAILLPIDRILDTVRTVVNVQGDMMISVVVDRYTKEPEVTG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR782267_4	4.6\|2125022\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2125022-2125053	32	CP033552	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence	107311-107342	2	0.938
NZ_LR782267_1	1.10\|320668\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320668-320699	32	AP014343	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C17, * SEQUENCING IN PROGRESS *	22324-22355	4	0.875
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP024183	Moraxella osloensis strain KSH plasmid p3, complete sequence	51646-51679	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP024183	Moraxella osloensis strain KSH plasmid p3, complete sequence	11326-11359	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP024449	Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence	5044-5077	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP014238	Moraxella osloensis strain CCUG 350 plasmid unnamed1, complete sequence	8333-8366	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP047227	Moraxella osloensis strain YV1 plasmid p1, complete sequence	46286-46319	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_AP017383	Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence	54187-54220	4	0.882
NZ_LR782267_2	2.1\|361312\|34\|NZ_LR782267\|CRISPRCasFinder	361312-361345	34	NZ_CP024184	Moraxella osloensis strain KSH plasmid p4, complete sequence	43520-43553	4	0.882
NZ_LR782267_1	1.11\|320728\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320728-320759	32	CP033552	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence	102424-102455	6	0.812
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	AP014332	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C54, * SEQUENCING IN PROGRESS *	13981-14012	7	0.781
NZ_LR782267_1	1.7\|320488\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320488-320519	32	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	122642-122673	7	0.781
NZ_LR782267_1	1.7\|320488\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320488-320519	32	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	118567-118598	7	0.781
NZ_LR782267_4	4.2\|2124782\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	2124782-2124813	32	MN855993	Siphoviridae sp. isolate 399, complete genome	1634-1665	7	0.781
NZ_LR782267_4	4.2\|2124782\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	2124782-2124813	32	MN812722	Vibrio phage NF, complete genome	31520-31551	7	0.781
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	179758-179789	7	0.781
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	65332-65363	7	0.781
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NC_009999	Shewanella baltica OS195 plasmid pS19502, complete sequence	6510-6541	7	0.781
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NC_016905	Shewanella baltica OS678 plasmid pSBAL67801, complete sequence	69019-69050	7	0.781
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NC_009661	Shewanella baltica OS185 plasmid pS18501, complete sequence	29272-29303	7	0.781
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	KX229736	Campylobacter phage PC5, complete genome	33536-33567	7	0.781
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	NC_015464	Campylobacter phage NCTC12673, complete genome	113833-113864	7	0.781
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	KX236333	Campylobacter phage PC14, complete genome	13790-13821	7	0.781
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	MN018232	Synechococcus phage S-B43, complete genome	25733-25764	8	0.75
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	MH920638	Synechoccus phage S-B05, partial genome	4321-4352	8	0.75
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	MK799832	Synechococcus phage S-B05, complete genome	4321-4352	8	0.75
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	MK552327	Pseudomonas phage Psa21, complete genome	138242-138273	8	0.75
NZ_LR782267_1	1.1\|320128\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320128-320159	32	MH920637	Synechoccus phage S-B43, partial genome	25733-25764	8	0.75
NZ_LR782267_3	3.4\|1052451\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052451-1052482	32	NC_019512	Helicobacter phage 1961P, complete genome	14108-14139	8	0.75
NZ_LR782267_3	3.11\|1052871\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052871-1052902	32	MT119360	Enterococcus phage nattely, complete genome	70679-70710	8	0.75
NZ_LR782267_3	3.11\|1052871\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052871-1052902	32	HQ634156	Vibrio phage PWH3a-P1 genomic sequence	25312-25343	8	0.75
NZ_LR782267_4	4.9\|2125202\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2125202-2125233	32	MG945789	UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome	717-748	8	0.75
NZ_LR782267_4	4.9\|2125202\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2125202-2125233	32	MG945425	UNVERIFIED: Microviridae sp. isolate 4438-1801, complete genome	579-610	8	0.75
NZ_LR782267_5	5.4\|3720416\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720416-3720447	32	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	256469-256500	8	0.75
NZ_LR782267_5	5.4\|3720416\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720416-3720447	32	NZ_CP022176	Aeromonas salmonicida strain S44 plasmid pS44-1, complete sequence	200569-200600	8	0.75
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	NC_029094	Pseudoalteromonas phage H101, complete genome	80544-80575	8	0.75
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	185742-185773	8	0.75
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	LT605060	Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2	45262-45293	8	0.75
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	NZ_CP012005	Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence	52197-52228	8	0.75
NZ_LR782267_5	5.9\|3720716\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720716-3720747	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	555295-555326	8	0.75
NZ_LR782267_5	5.11\|3720836\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720836-3720867	32	NC_048182	Edwardsiella virus pEt-SU, complete genome	139944-139975	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	NC_014937	Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence	46556-46587	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	NC_017202	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence	50530-50561	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	195132-195163	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	38921-38952	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	NC_020393	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence	30998-31029	8	0.75
NZ_LR782267_5	5.15\|3721077\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721077-3721108	32	NZ_CP021063	Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence	99379-99410	8	0.75
NZ_LR782267_5	5.21\|3721437\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721437-3721468	32	NZ_CP050443	Tolypothrix sp. PCC 7910 plasmid unnamed3, complete sequence	25645-25676	8	0.75
NZ_LR782267_5	5.21\|3721437\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721437-3721468	32	NZ_CP050445	Tolypothrix sp. PCC 7910 plasmid unnamed5, complete sequence	5307-5338	8	0.75
NZ_LR782267_1	1.10\|320668\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	320668-320699	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	128426-128457	9	0.719
NZ_LR782267_3	3.1\|1052271\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052271-1052302	32	NC_031006	Bacillus phage DIGNKC, complete genome	123884-123915	9	0.719
NZ_LR782267_3	3.1\|1052271\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052271-1052302	32	MT584805	Bacillus phage Tomato, complete genome	127082-127113	9	0.719
NZ_LR782267_3	3.1\|1052271\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052271-1052302	32	KX961632	Bacillus phage SBP8a, complete genome	123871-123902	9	0.719
NZ_LR782267_3	3.2\|1052331\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052331-1052362	32	JN800508	Clostridium phage phi24R, complete genome	16429-16460	9	0.719
NZ_LR782267_3	3.2\|1052331\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052331-1052362	32	NC_048661	Clostridium phage CPS1, complete genome	15550-15581	9	0.719
NZ_LR782267_3	3.6\|1052571\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052571-1052602	32	NC_008242	Chelativorans sp. BNC1 plasmid 1, complete sequence	163834-163865	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448559	Streptococcus satellite phage Javan596, complete genome	707-738	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448553	Streptococcus satellite phage Javan588, complete genome	707-738	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448542	Streptococcus satellite phage Javan560, complete genome	795-826	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448540	Streptococcus satellite phage Javan559, complete genome	707-738	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	KX077892	Streptococcus phage phiJH1301-3, complete genome	12855-12886	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448550	Streptococcus satellite phage Javan581, complete genome	707-738	9	0.719
NZ_LR782267_3	3.11\|1052871\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052871-1052902	32	JN638751	Bacillus phage G, complete genome	378641-378672	9	0.719
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	MG592671	Vibrio phage 2.275.O._10N.286.54.E11, partial genome	70003-70034	9	0.719
NZ_LR782267_4	4.5\|2124962\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2124962-2124993	32	NZ_CP025124	Planococcus sp. MB-3u-03 plasmid unnamed1, complete sequence	9283-9314	9	0.719
NZ_LR782267_5	5.2\|3720296\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720296-3720327	32	NZ_CP012254	Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence	88709-88740	9	0.719
NZ_LR782267_5	5.3\|3720356\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720356-3720387	32	MF547662	Clostridioides phage LIBA6276, complete genome	115394-115425	9	0.719
NZ_LR782267_5	5.4\|3720416\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720416-3720447	32	MN508817	Yersinia phage JC221, partial genome	85580-85611	9	0.719
NZ_LR782267_5	5.5\|3720476\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720476-3720507	32	NC_022778	Clostridium tetani 12124569 plasmid p12124569, complete sequence	9320-9351	9	0.719
NZ_LR782267_5	5.10\|3720776\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720776-3720807	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	178020-178051	9	0.719
NZ_LR782267_5	5.21\|3721437\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721437-3721468	32	NZ_CP021671	Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence	32969-33000	9	0.719
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	NZ_CP012912	Streptococcus suis strain NSUI060 plasmid pNSUI060a, complete sequence	5307-5338	10	0.688
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	838684-838715	10	0.688
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK893987	Staphylococcus phage PMBT8, complete genome	43848-43879	10	0.688
NZ_LR782267_3	3.10\|1052811\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	1052811-1052842	32	MK448557	Streptococcus satellite phage Javan594, complete genome	709-740	10	0.688
NZ_LR782267_4	4.2\|2124782\|32\|NZ_LR782267\|PILER-CR,CRISPRCasFinder,CRT	2124782-2124813	32	MK249135	Blackfly microvirus SF02 isolate 020, complete genome	318-349	10	0.688
NZ_LR782267_4	4.10\|2125262\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	2125262-2125293	32	MH598801	Pelagibacter phage HTVC200P, complete genome	36744-36775	10	0.688
NZ_LR782267_4	4.14\|2125200\|34\|NZ_LR782267\|PILER-CR	2125200-2125233	34	MG945789	UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome	717-750	10	0.706
NZ_LR782267_4	4.14\|2125200\|34\|NZ_LR782267\|PILER-CR	2125200-2125233	34	MG945425	UNVERIFIED: Microviridae sp. isolate 4438-1801, complete genome	579-612	10	0.706
NZ_LR782267_5	5.1\|3720236\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	3720236-3720267	32	NC_021976	Acetobacter pasteurianus 386B plasmid Apa386Bp1, complete sequence	193188-193219	10	0.688
NZ_LR782267_5	5.1\|3720236\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	3720236-3720267	32	NZ_CP042810	Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence	8441-8472	10	0.688
NZ_LR782267_5	5.1\|3720236\|32\|NZ_LR782267\|CRISPRCasFinder,CRT	3720236-3720267	32	NZ_AP014882	Acetobacter pasteurianus NBRC 101655 plasmid plasmid1 DNA, complete genome	166629-166660	10	0.688
NZ_LR782267_5	5.4\|3720416\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3720416-3720447	32	CP003950	Rhodococcus opacus PD630 plasmid 1, complete sequence	49703-49734	10	0.688
NZ_LR782267_5	5.16\|3721137\|32\|NZ_LR782267\|CRISPRCasFinder,CRT,PILER-CR	3721137-3721168	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1882126-1882157	10	0.688

1. spacer 4.6|2125022|32|NZ_LR782267|CRISPRCasFinder,CRT matches to CP033552 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence) position: , mismatch: 2, identity: 0.938

ataaagaattggaactggattgccttgtgcaa	CRISPR spacer
ataaagaattggaacaggattaccttgtgcaa	Protospacer
*************** *****.**********

2. spacer 1.10|320668|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to AP014343 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C17, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 4, identity: 0.875

tcttgta-tcaatatcagcaccacagaaagggc	CRISPR spacer
-attatattcaatatcagcaccgcagaaagggc	Protospacer
  **.** **************.**********

3. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP024183 (Moraxella osloensis strain KSH plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
acccgagtgcaaggcgaaggctatgcctgagtac	Protospacer
 ******.**************.**********

4. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP024183 (Moraxella osloensis strain KSH plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
gcccgagcgcaagacgaaggctatgcctgagtga	Protospacer
 ************.********.*********.*

5. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP024449 (Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
acccgagtgcaaggcgaaggctatgcctgagtac	Protospacer
 ******.**************.**********

6. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP014238 (Moraxella osloensis strain CCUG 350 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
gcccgagtgcaaggcgaaggctatgcctgagtac	Protospacer
 ******.**************.**********

7. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP047227 (Moraxella osloensis strain YV1 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
gcccgagtgcaaggcgaaggctatgcctgagtac	Protospacer
 ******.**************.**********

8. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_AP017383 (Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
gcccgagcgcaagacgaaggctatgcctgagtga	Protospacer
 ************.********.*********.*

9. spacer 2.1|361312|34|NZ_LR782267|CRISPRCasFinder matches to NZ_CP024184 (Moraxella osloensis strain KSH plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.882

tcccgagcgcaaggcgaaggctgtgcctgagtaa	CRISPR spacer
gcccgagcgcaagacgaaggctatgcctgagtga	Protospacer
 ************.********.*********.*

10. spacer 1.11|320728|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to CP033552 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence) position: , mismatch: 6, identity: 0.812

aatccagttgcaaaatatttagtcttgttcga	CRISPR spacer
aagactgctgcaatatatttagtcttgtttga	Protospacer
**  * *.***** ***************.**

11. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to AP014332 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C54, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
gaaatctacaaatgctgttgatgtttctagtt	Protospacer
 * *  *********** ** **********.

12. spacer 1.7|320488|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 7, identity: 0.781

taacgtagcattatctccaagtggtattgatg	CRISPR spacer
agatttggcattatctccaagtggtattgact	Protospacer
 .*. *.***********************.

13. spacer 1.7|320488|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 7, identity: 0.781

--taacgtagcattatctccaagtggtattgatg	CRISPR spacer
attaa--ttgcaaaatctccaagtggtattgaaa	Protospacer
  ***  * ***  ****************** .

14. spacer 4.2|2124782|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MN855993 (Siphoviridae sp. isolate 399, complete genome) position: , mismatch: 7, identity: 0.781

accaacaatcatcacgctcaaagtcatcaaga	CRISPR spacer
accaacaatcatcacgttcaaaatcaagtaac	Protospacer
****************.*****.***   *.

15. spacer 4.2|2124782|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MN812722 (Vibrio phage NF, complete genome) position: , mismatch: 7, identity: 0.781

accaacaatcatcacgctcaaagtcatcaaga	CRISPR spacer
accaaaaatcatcgcgctcaaagtctggaatt	Protospacer
***** *******.***********   **

16. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 7, identity: 0.781

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agccattgattgtactgagtaataatgatggc	Protospacer
. **  *.******** **************.

17. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 7, identity: 0.781

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agccattgattgtactgagtaataatgatggc	Protospacer
. **  *.******** **************.

18. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NC_009999 (Shewanella baltica OS195 plasmid pS19502, complete sequence) position: , mismatch: 7, identity: 0.781

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agccggctattgtactcagtaacaatgatggc	Protospacer
. ** *. **************.********.

19. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NC_016905 (Shewanella baltica OS678 plasmid pSBAL67801, complete sequence) position: , mismatch: 7, identity: 0.781

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agccggctattgtactcagtaacaatgatggc	Protospacer
. ** *. **************.********.

20. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NC_009661 (Shewanella baltica OS185 plasmid pS18501, complete sequence) position: , mismatch: 7, identity: 0.781

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agccggctattgtactcagtaacaatgatggc	Protospacer
. ** *. **************.********.

21. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 7, identity: 0.781

gtcatta--tcatcattataaaaactttggtaat	CRISPR spacer
--caataagcaatcattataaacacttttgtaat	Protospacer
  ** **  . *********** ***** *****

22. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_015464 (Campylobacter phage NCTC12673, complete genome) position: , mismatch: 7, identity: 0.781

gtcatta--tcatcattataaaaactttggtaat	CRISPR spacer
--caataagcaatcattataaacacttttgtaat	Protospacer
  ** **  . *********** ***** *****

23. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to KX236333 (Campylobacter phage PC14, complete genome) position: , mismatch: 7, identity: 0.781

gtcatta--tcatcattataaaaactttggtaat	CRISPR spacer
--caataagcaatcattataaacacttttgtaat	Protospacer
  ** **  . *********** ***** *****

24. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 8, identity: 0.75

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
tacgattacaaatgctggtgttggatacacac	Protospacer
***.* *****************  * .*  *

25. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MH920638 (Synechoccus phage S-B05, partial genome) position: , mismatch: 8, identity: 0.75

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
tacgattacaaatgctggtgttggatacacac	Protospacer
***.* *****************  * .*  *

26. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK799832 (Synechococcus phage S-B05, complete genome) position: , mismatch: 8, identity: 0.75

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
tacgattacaaatgctggtgttggatacacac	Protospacer
***.* *****************  * .*  *

27. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 8, identity: 0.75

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
tctcgatacaaatgcagttgttgtttcttatc	Protospacer
* . .********** * ********** .**

28. spacer 1.1|320128|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MH920637 (Synechoccus phage S-B43, partial genome) position: , mismatch: 8, identity: 0.75

tacaaatacaaatgctggtgttgtttctagtc	CRISPR spacer
tacgattacaaatgctggtgttggatacacac	Protospacer
***.* *****************  * .*  *

29. spacer 3.4|1052451|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NC_019512 (Helicobacter phage 1961P, complete genome) position: , mismatch: 8, identity: 0.75

ctaattaaagggcttctatatctttgttatct	CRISPR spacer
ttgtgttacgggcttctatttctttcttatct	Protospacer
.*.  * * ********** ***** ******

30. spacer 3.11|1052871|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 8, identity: 0.75

tgaatgtgttgaatggttttcaaatttatcga	CRISPR spacer
cggttttagtgaatggttttctaatttatgga	Protospacer
.*. * *. ************ ******* **

31. spacer 3.11|1052871|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to HQ634156 (Vibrio phage PWH3a-P1 genomic sequence) position: , mismatch: 8, identity: 0.75

tgaatgtgttgaatggttttcaaatttatcga	CRISPR spacer
agaatgtggtgaatggttttctaaagtagaca	Protospacer
 ******* ************ **  **   *

32. spacer 4.9|2125202|32|NZ_LR782267|CRISPRCasFinder,CRT matches to MG945789 (UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome) position: , mismatch: 8, identity: 0.75

agtcaccgccgcaagctatagcaacattcagt	CRISPR spacer
catcacggccgcaagctatatcaacattaccc	Protospacer
 .**** ************* *******   .

33. spacer 4.9|2125202|32|NZ_LR782267|CRISPRCasFinder,CRT matches to MG945425 (UNVERIFIED: Microviridae sp. isolate 4438-1801, complete genome) position: , mismatch: 8, identity: 0.75

agtcaccgccgcaagctatagcaacattcagt	CRISPR spacer
catcacggccgcaagctatatcaacattaccc	Protospacer
 .**** ************* *******   .

34. spacer 5.4|3720416|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

attaatacggttgctgatctggttgctgtatt	CRISPR spacer
cgtcttccagtcgctgatctggatgctgtatt	Protospacer
  *  * *.**.********** *********

35. spacer 5.4|3720416|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022176 (Aeromonas salmonicida strain S44 plasmid pS44-1, complete sequence) position: , mismatch: 8, identity: 0.75

attaatacggttgctgatctggttgctgtatt	CRISPR spacer
tttgtgacagttgctgatccggttgctgtttc	Protospacer
 **.  **.**********.********* *.

36. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_029094 (Pseudoalteromonas phage H101, complete genome) position: , mismatch: 8, identity: 0.75

gtcattatcatcattataaaaactttggtaat	CRISPR spacer
ttcattatcatcattatcaaaagttggtttca	Protospacer
 **************** **** ** * *

37. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 8, identity: 0.75

gtcattatcatcattataaaaactttggtaat	CRISPR spacer
aaaattatctttattataaaaactttagcatt	Protospacer
.  ****** *.**************.*.* *

38. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to LT605060 (Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

gtcattatcatcattataaaaactttggtaat	CRISPR spacer
attttgatgataattataaaaactttggtgag	Protospacer
.*. * ** ** *****************.*

39. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012005 (Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcattatcatcattataaaaactttggtaat	CRISPR spacer
attttgatgataattataaaaactttggtgag	Protospacer
.*. * ** ** *****************.*

40. spacer 5.9|3720716|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75

tgtg-gcagtgcttatctttgccggtttgtgtt	CRISPR spacer
-atgcgcggtgctgatctttgccggtttgccga	Protospacer
 .** **.***** ***************.

41. spacer 5.11|3720836|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_048182 (Edwardsiella virus pEt-SU, complete genome) position: , mismatch: 8, identity: 0.75

tgcaacattgcaaaggaaaggtcattttatgt	CRISPR spacer
tttatcattgtaaaggacaggtcattttcaat	Protospacer
* .* *****.****** **********  .*

42. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_014937 (Bacillus thuringiensis CT43 plasmid pBMB0558, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

43. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

44. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

45. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

46. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

47. spacer 5.15|3721077|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 8, identity: 0.75

attcatcagtaggctgtaccgaaaaagtaaac	CRISPR spacer
ctgtacccgtaggctatacagaaaaagtaaag	Protospacer
 * .*.* *******.*** ***********

48. spacer 5.21|3721437|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050443 (Tolypothrix sp. PCC 7910 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

attatattgaaaaccctgcttcaaatccgaat	CRISPR spacer
tttatatggaaatccctgcttcaaactcttac	Protospacer
 ****** **** ************..*  *.

49. spacer 5.21|3721437|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050445 (Tolypothrix sp. PCC 7910 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

attatattgaaaaccctgcttcaaatccgaat	CRISPR spacer
tttatatggaaatccctgcttcaaactcttac	Protospacer
 ****** **** ************..*  *.

50. spacer 1.10|320668|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcttgtatcaatatcagcaccacagaaagggc	CRISPR spacer
ttcccgctgaatatcaggaacacagaaagggc	Protospacer
*...   * ******** * ************

51. spacer 3.1|1052271|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NC_031006 (Bacillus phage DIGNKC, complete genome) position: , mismatch: 9, identity: 0.719

aaaatgtaaccagtttgttagattgggtgaac	CRISPR spacer
aatcggtaagcagtttgatagattgggtatca	Protospacer
**   **** ******* **********.

52. spacer 3.1|1052271|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MT584805 (Bacillus phage Tomato, complete genome) position: , mismatch: 9, identity: 0.719

aaaatgtaaccagtttgttagattgggtgaac	CRISPR spacer
aatcggtaagcagtttgatagattgggtatca	Protospacer
**   **** ******* **********.

53. spacer 3.1|1052271|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to KX961632 (Bacillus phage SBP8a, complete genome) position: , mismatch: 9, identity: 0.719

aaaatgtaaccagtttgttagattgggtgaac	CRISPR spacer
aatcggtaagcagtttgatagattgggtatca	Protospacer
**   **** ******* **********.

54. spacer 3.2|1052331|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to JN800508 (Clostridium phage phi24R, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagccaaaaaattaaatcctattcacctc	CRISPR spacer
ataatataaataaattaaatcctattgacctc	Protospacer
 *.  .. ** *************** *****

55. spacer 3.2|1052331|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NC_048661 (Clostridium phage CPS1, complete genome) position: , mismatch: 9, identity: 0.719

ttgtagccaaaaaattaaatcctattcacctc	CRISPR spacer
atatgataaataaattaaatcctattgacctt	Protospacer
 *.*... ** *************** ****.

56. spacer 3.6|1052571|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NC_008242 (Chelativorans sp. BNC1 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atacaagtgcgtcagcgatctttttcgcgtac	CRISPR spacer
gaacaagtgcgacagcgatctatttcctgcct	Protospacer
. ********* ********* **** .*. .

57. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448559 (Streptococcus satellite phage Javan596, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagcgcgtg	Protospacer
  ************. **********   *.

58. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448553 (Streptococcus satellite phage Javan588, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagcgcgtg	Protospacer
  ************. **********   *.

59. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448542 (Streptococcus satellite phage Javan560, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagtgcgtg	Protospacer
  ************. **********   *.

60. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448540 (Streptococcus satellite phage Javan559, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagcgcgtg	Protospacer
  ************. **********   *.

61. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to KX077892 (Streptococcus phage phiJH1301-3, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagcgcgtg	Protospacer
  ************. **********   *.

62. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448550 (Streptococcus satellite phage Javan581, complete genome) position: , mismatch: 9, identity: 0.719

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccgtattgcaatatacgtttgttcagcgcgtg	Protospacer
  ************. **********   *.

63. spacer 3.11|1052871|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.719

tgaatgtgttgaatggttttcaaatttatcga	CRISPR spacer
acatagtgttgaatatttttcaaatttacgaa	Protospacer
  *  *********. ************. .*

64. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to MG592671 (Vibrio phage 2.275.O._10N.286.54.E11, partial genome) position: , mismatch: 9, identity: 0.719

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
agtgtagcattgtacacactaataatgatggt	Protospacer
. . *.  ******* ** *************

65. spacer 4.5|2124962|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NZ_CP025124 (Planococcus sp. MB-3u-03 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccctgtaattgtactcagtaataatgatggt	CRISPR spacer
ggactgtaattgaactcaataataattgaaga	Protospacer
*  ********* *****.******* . .*

66. spacer 5.2|3720296|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012254 (Cronobacter sakazakii strain NCTC 8155 plasmid pCS1, complete sequence) position: , mismatch: 9, identity: 0.719

acgaatgtctgtggtgtcgtctgaatcaattc	CRISPR spacer
tccgatgtcgatggtgtcgtctgaatctgtca	Protospacer
 * .***** .**************** .*.

67. spacer 5.3|3720356|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 9, identity: 0.719

gttcaggaatagaaagtttaaaaacggatgca	CRISPR spacer
tagaagaaatagaaagtttaaaaaagggggaa	Protospacer
    **.***************** **. * *

68. spacer 5.4|3720416|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to MN508817 (Yersinia phage JC221, partial genome) position: , mismatch: 9, identity: 0.719

attaatacggttgctgatctggttgctgtatt	CRISPR spacer
aaacaagcggttgctgctctggttcctgtaca	Protospacer
*   * .********* ******* *****.

69. spacer 5.5|3720476|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NC_022778 (Clostridium tetani 12124569 plasmid p12124569, complete sequence) position: , mismatch: 9, identity: 0.719

gtcattatcatcattataaaaactttggtaat	CRISPR spacer
tttattatcataaatataaaaacttttattta	Protospacer
 *.******** * ************ .*

70. spacer 5.10|3720776|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gatcaggcggaaattcaatttgatcacgtagt	CRISPR spacer
gttcaggcggaaattcaagttggtcgcaggac	Protospacer
* **************** ***.**.*. ...

71. spacer 5.21|3721437|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021671 (Bacillus licheniformis strain SRCM100141 plasmid pBL141-1 sequence sequence) position: , mismatch: 9, identity: 0.719

attatattgaaaaccctgcttcaaatccgaat	CRISPR spacer
ataatattgaaaaccctggttcaagcttcggt	Protospacer
** *************** *****.... ..*

72. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012912 (Streptococcus suis strain NSUI060 plasmid pNSUI060a, complete sequence) position: , mismatch: 10, identity: 0.688

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccatattgcaatatacgtttgttcagcgcgtg	Protospacer
  .***********. **********   *.

73. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 10, identity: 0.688

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
cgatattgcaatatgcgtttgctcaggcgttg	Protospacer
 *.************ *****.****... .

74. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 10, identity: 0.688

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
tgatattgcaatatgagttggctcaggggcga	Protospacer
 *.**************** *.****. .

75. spacer 3.10|1052811|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK448557 (Streptococcus satellite phage Javan594, complete genome) position: , mismatch: 10, identity: 0.688

aggtattgcaatatgagtttgttcagatagct	CRISPR spacer
ccatattgcaatatacgtttgttcagtgtgtg	Protospacer
  .***********. **********   *.

76. spacer 4.2|2124782|32|NZ_LR782267|PILER-CR,CRISPRCasFinder,CRT matches to MK249135 (Blackfly microvirus SF02 isolate 020, complete genome) position: , mismatch: 10, identity: 0.688

accaacaatcatcacgctcaaagtcatcaaga	CRISPR spacer
accaacaatcatcccgttcaaagcagccgcag	Protospacer
************* **.******. ..*. ..

77. spacer 4.10|2125262|32|NZ_LR782267|CRISPRCasFinder,CRT matches to MH598801 (Pelagibacter phage HTVC200P, complete genome) position: , mismatch: 10, identity: 0.688

aacatcagaacccgagccgacattaccaatcc	CRISPR spacer
tccgccagagccagagccgacattaccacctg	Protospacer
  *..****.** *************** ..

78. spacer 4.14|2125200|34|NZ_LR782267|PILER-CR matches to MG945789 (UNVERIFIED: Microviridae sp. isolate 4354-1801, complete genome) position: , mismatch: 10, identity: 0.706

agagtcaccgccgcaagctatagcaacattcagt	CRISPR spacer
tccatcacggccgcaagctatatcaacattaccc	Protospacer
   .**** ************* *******   .

79. spacer 4.14|2125200|34|NZ_LR782267|PILER-CR matches to MG945425 (UNVERIFIED: Microviridae sp. isolate 4438-1801, complete genome) position: , mismatch: 10, identity: 0.706

agagtcaccgccgcaagctatagcaacattcagt	CRISPR spacer
tccatcacggccgcaagctatatcaacattaccc	Protospacer
   .**** ************* *******   .

80. spacer 5.1|3720236|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NC_021976 (Acetobacter pasteurianus 386B plasmid Apa386Bp1, complete sequence) position: , mismatch: 10, identity: 0.688

gtaaatggtttccaaaatttacagttccataa	CRISPR spacer
tgaaatggattccaaaatgtacagtcttttgg	Protospacer
  ****** ********* ******... *..

81. spacer 5.1|3720236|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NZ_CP042810 (Acetobacter oryzoeni strain B6 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gtaaatggtttccaaaatttacagttccataa	CRISPR spacer
tgaaatggattccaaaatgtacagtcttttgg	Protospacer
  ****** ********* ******... *..

82. spacer 5.1|3720236|32|NZ_LR782267|CRISPRCasFinder,CRT matches to NZ_AP014882 (Acetobacter pasteurianus NBRC 101655 plasmid plasmid1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

gtaaatggtttccaaaatttacagttccataa	CRISPR spacer
tgaaatggattccaaaatgtacagtcttttgg	Protospacer
  ****** ********* ******... *..

83. spacer 5.4|3720416|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to CP003950 (Rhodococcus opacus PD630 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

attaatacggttgctgatctggttgctgtatt	CRISPR spacer
cgtaatacgggtgctgatctggctgattctca	Protospacer
  ******** ***********.** * . .

84. spacer 5.16|3721137|32|NZ_LR782267|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

tagtagcgacgaacgtgttaagcgacgtgacc	CRISPR spacer
actcgacgacgaacgggttacgcgacgtggtc	Protospacer
   ...********* **** ********..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1485624 : 1535203

Acinetobacter_phage(68.97%)

head,protease,transposase,plate,terminase,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174506052.1\|1485624_1486278_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_174506053.1\|1486688_1487183_-	hypothetical protein	NA	NA	NA	NA
WP_121974673.1\|1487324_1488068_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	4.4e-19	29.7
WP_121974672.1\|1488313_1490953_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_121974671.1\|1491249_1491519_-	hypothetical protein	NA	NA	NA	NA
WP_174506054.1\|1491653_1492019_-	hypothetical protein	NA	NA	NA	NA
WP_174506055.1\|1492904_1493837_-	N-acetylmuramoyl-L-alanine amidase	A0A0F6R5Z1	Sinorhizobium_phage	3.6e-10	28.7
WP_174506056.1\|1494407_1494674_+	hypothetical protein	NA	NA	NA	NA
WP_174506057.1\|1496148_1496415_-	hypothetical protein	NA	NA	NA	NA
WP_121975411.1\|1497176_1497386_-	cold-shock protein	Q9AZD3	Lactococcus_phage	8.8e-18	66.7
WP_174506058.1\|1498645_1500265_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_174506059.1\|1500629_1502351_+	ubiquinone-dependent pyruvate dehydrogenase	G8DDL3	Micromonas_pusilla_virus	5.8e-38	23.4
WP_174506060.1\|1503122_1503269_+	hypothetical protein	NA	NA	NA	NA
WP_174507584.1\|1504305_1504770_-	hypothetical protein	NA	NA	NA	NA
WP_174506061.1\|1505926_1506355_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_174506062.1\|1506374_1506929_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_174506063.1\|1506900_1507578_+\|protease	zinc protease	NA	NA	NA	NA
WP_174506064.1\|1507552_1508044_+	hypothetical protein	NA	NA	NA	NA
WP_174507585.1\|1508343_1509138_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_174506065.1\|1509192_1509987_-	glucose 1-dehydrogenase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	1.7e-21	31.5
WP_174506066.1\|1510096_1510990_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_174507586.1\|1511022_1511607_-	N-acetylmuramidase family protein	U5PZP0	Acinetobacter_phage	6.7e-55	55.7
WP_174505652.1\|1511599_1511986_-	DUF2304 family protein	NA	NA	NA	NA
WP_174507587.1\|1512137_1512497_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_174506067.1\|1512560_1513187_-	hypothetical protein	K7PMC4	Enterobacterial_phage	7.3e-15	37.6
WP_174506068.1\|1513189_1514764_-\|tail	tail fiber protein	K4I0L0	Acinetobacter_phage	7.4e-32	44.4
WP_174506069.1\|1514763_1515393_-	DUF2612 domain-containing protein	K4HYS2	Acinetobacter_phage	1.6e-54	54.1
WP_174506070.1\|1515392_1516400_-\|plate	baseplate J/gp47 family protein	E2GM17	Acinetobacter_phage	3.3e-70	43.1
WP_174506071.1\|1516585_1516939_-	hypothetical protein	K4IBY0	Acinetobacter_phage	2.7e-27	49.6
WP_174507588.1\|1516935_1517556_-\|plate	phage baseplate protein	A0A2R3UAK1	Myoviridae_environmental_samples	8.4e-40	52.4
WP_174506072.1\|1517539_1518418_-	hypothetical protein	A0A220NQG9	Acinetobacter_phage	1.3e-81	51.0
WP_174506073.1\|1518407_1518689_-	hypothetical protein	A0A220NQH5	Acinetobacter_phage	4.8e-19	47.8
WP_174506074.1\|1518693_1519296_-	hypothetical protein	A0A1V0DZ59	Acinetobacter_phage	6.0e-51	54.0
WP_174506075.1\|1519361_1520360_-	hypothetical protein	NA	NA	NA	NA
WP_174506076.1\|1520717_1523090_-	hypothetical protein	A0A068CCM7	Acinetobacter_phage	4.3e-116	35.8
WP_174506077.1\|1523076_1523280_-	hypothetical protein	NA	NA	NA	NA
WP_121974313.1\|1523282_1523693_-	hypothetical protein	NA	NA	NA	NA
WP_121974312.1\|1523692_1524142_-	hypothetical protein	A0A1V0DZ74	Acinetobacter_phage	6.5e-34	45.6
WP_174506078.1\|1524155_1525631_-	DUF3383 domain-containing protein	A0A068C8K3	Acinetobacter_phage	6.6e-99	42.2
WP_174506079.1\|1525632_1526118_-	hypothetical protein	Q8HAQ3	Burkholderia_phage	9.6e-07	35.2
WP_174506080.1\|1526105_1526486_-	hypothetical protein	NA	NA	NA	NA
WP_174506081.1\|1526478_1527108_-	hypothetical protein	A0A1X9SFJ7	Acinetobacter_phage	1.7e-16	30.5
WP_174506082.1\|1527035_1527458_-	DUF4054 domain-containing protein	K4NXG6	Acinetobacter_phage	6.8e-17	42.4
WP_174506083.1\|1527470_1527815_-	hypothetical protein	NA	NA	NA	NA
WP_174506084.1\|1527883_1528900_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.9e-82	47.2
WP_174506085.1\|1528911_1529385_-	hypothetical protein	A0A1V0DZG3	Acinetobacter_phage	8.7e-29	48.1
WP_174506086.1\|1529400_1530543_-	DUF2213 domain-containing protein	I2GUD5	Acinetobacter_phage	2.1e-73	52.2
WP_174507589.1\|1530543_1531248_-\|head	phage head morphogenesis protein	A0A068CBK2	Acinetobacter_phage	6.2e-55	48.2
WP_174506087.1\|1531300_1532809_-	DUF1073 domain-containing protein	E2GLW8	Acinetobacter_phage	2.0e-111	51.2
WP_174506088.1\|1532801_1534079_-\|terminase	PBSX family phage terminase large subunit	A0A1X9SFB8	Acinetobacter_phage	3.2e-187	74.8
WP_174506089.1\|1534047_1534512_-	DUF2280 domain-containing protein	A0A0P0HSK4	Acinetobacter_phage	2.0e-30	52.4
WP_174506090.1\|1534558_1535203_-\|transposase	transposase	A0A0N7IRF1	Acinetobacter_phage	8.6e-96	72.8

DBSCAN-SWA_2

1538308 : 1549997

Acinetobacter_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174506094.1\|1538308_1538782_+	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	4.4e-49	63.0
WP_174506095.1\|1538832_1540128_-	DNA (cytosine-5-)-methyltransferase	Q6DMX0	Streptococcus_phage	2.3e-111	54.8
WP_174506096.1\|1540203_1541880_+	AAA family ATPase	M1NSM1	Streptococcus_phage	5.2e-52	41.3
WP_174506097.1\|1541894_1543148_+	LlaJI family restriction endonuclease	NA	NA	NA	NA
WP_174506098.1\|1543144_1543648_-	hypothetical protein	A0A0P0IY98	Acinetobacter_phage	1.2e-20	35.9
WP_174506099.1\|1543652_1544054_-	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	4.3e-37	59.4
WP_174506100.1\|1544054_1545005_-	helix-turn-helix domain-containing protein	I2GUI3	Acinetobacter_phage	2.5e-19	50.5
WP_121972853.1\|1545001_1545304_-	hypothetical protein	A0A0P0I444	Acinetobacter_phage	7.5e-26	60.6
WP_174506101.1\|1545551_1545743_-	hypothetical protein	NA	NA	NA	NA
WP_174506102.1\|1545843_1546587_+	LexA family transcriptional regulator	A0A1B1P9J5	Acinetobacter_phage	5.3e-89	66.4
WP_174506103.1\|1546844_1548278_+	hypothetical protein	NA	NA	NA	NA
WP_174506104.1\|1548261_1548654_+	hypothetical protein	NA	NA	NA	NA
WP_174506105.1\|1548858_1549302_+	hypothetical protein	A0A0N7IRE9	Acinetobacter_phage	3.5e-24	42.2
WP_174506106.1\|1549301_1549997_+	DUF1071 domain-containing protein	A0A2I7R8E0	Vibrio_phage	1.4e-22	47.8

DBSCAN-SWA_3

2208314 : 2218778

Acinetobacter_phage(88.89%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174506456.1\|2208314_2209871_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	9.7e-210	74.3
WP_174506457.1\|2210091_2211645_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	6.2e-217	75.2
WP_174506458.1\|2211641_2213441_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	2.9e-258	72.0
WP_174506459.1\|2213836_2214520_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.4e-50	48.8
WP_174507607.1\|2214874_2215450_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	9.1e-105	93.7
WP_174507608.1\|2215467_2216517_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.0e-162	86.1
WP_174506460.1\|2216532_2217339_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.9e-124	84.0
WP_121973924.1\|2217434_2218127_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	6.6e-94	80.0
WP_171334450.1\|2218229_2218778_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	1.9e-91	94.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR782267

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection