CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR793264	Klebsiella pneumoniae isolate NGKP54 chromosome 1	3 crisprs	WYL,DinG,cas3,csa3,DEDDh,RT	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR793264_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR793264_1

2083455-2083545

Orphan

Consensus_repeat	Method
TCGCGCTTCGCTTAGCGAGGCTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR793264_1

>merge|NZ_LR793264|1|2083455-2083545|CRISPRCasFinder
TCGCGCTTCGCTTAGCGAGGCTACACATTCCTGCACTCTCAGCCACCTGTTCTGCTGTCTCATCGATCGCGCTTCGCTTAGCGAGGCGACA

>NZ_LR793264|1|1|2083455-2083545|CRISPRCasFinder
TCGCGCTTCGCTTAGCGAGGCTACA	CATTCCTGCACTCTCAGCCACCTGTTCTGCTGTCTCATCGA
TCGCGCTTCGCTTAGCGAGGCGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR793264.1\|WP_002910105.1\|2077610_2078513_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_LR793264.1\|WP_002910097.1\|2073079_2075755_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_LR793264.1\|WP_002910103.1\|2077081_2077489_+\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
NZ_LR793264.1\|WP_004151854.1\|2081329_2082172_+\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_LR793264.1\|WP_032414325.1\|2091868_2091982_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR793264.1\|WP_032414273.1\|2075902_2076520_-\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_LR793264.1\|WP_002910189.1\|2085042_2085720_-\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_LR793264.1\|WP_016947537.1\|2084149_2085046_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_LR793264.1\|WP_023327915.1\|2093807_2095586_+\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
NZ_LR793264.1\|WP_002910198.1\|2095596_2096247_+\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_LR793264.1\|WP_023286597.1\|2087958_2091702_-\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_LR793264.1\|WP_002910191.1\|2085719_2086430_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_LR793264.1\|WP_004175568.1\|2092107_2093496_-\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_LR793264.1\|WP_004145401.1\|2076527_2076659_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR793264.1\|WP_002910108.1\|2079813_2080716_-\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_LR793264.1\|WP_032103886.1\|2072816_2073002_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR793264.1\|WP_002910109.1\|2080828_2081287_+\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
NZ_LR793264.1\|WP_002910193.1\|2086426_2087962_-\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_LR793264.1\|WP_004175574.1\|2078710_2079724_-\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_LR793264.1\|WP_004152249.1\|2083598_2084042_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439

Protein	Function_ID	Function_description	E-value
NZ_LR793264.1\|WP_002910105.1\|2077610_2078513_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_LR793264.1\|WP_002910097.1\|2073079_2075755_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_LR793264.1\|WP_002910103.1\|2077081_2077489_+\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79
NZ_LR793264.1\|WP_004151854.1\|2081329_2082172_+\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176
NZ_LR793264.1\|WP_023327915.1\|2093807_2095586_+\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
NZ_LR793264.1\|WP_032414273.1\|2075902_2076520_-\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.19256e-117
NZ_LR793264.1\|WP_016947537.1\|2084149_2085046_+\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	9.34428e-16
NZ_LR793264.1\|WP_002910198.1\|2095596_2096247_+\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
NZ_LR793264.1\|WP_023286597.1\|2087958_2091702_-\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_LR793264.1\|WP_002910191.1\|2085719_2086430_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
NZ_LR793264.1\|WP_004175568.1\|2092107_2093496_-\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_LR793264.1\|WP_002910189.1\|2085042_2085720_-\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
NZ_LR793264.1\|WP_002910108.1\|2079813_2080716_-\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_LR793264.1\|WP_002910109.1\|2080828_2081287_+\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	7.51559e-107
NZ_LR793264.1\|WP_002910193.1\|2086426_2087962_-\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_LR793264.1\|WP_004175574.1\|2078710_2079724_-\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_LR793264.1\|WP_004152249.1\|2083598_2084042_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.05574e-32

>NZ_LR793264.1|WP_004151854.1|2081329_2082172_+|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>NZ_LR793264.1|WP_002910109.1|2080828_2081287_+|YchJ-family-protein
MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>NZ_LR793264.1|WP_002910108.1|2079813_2080716_-|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>NZ_LR793264.1|WP_004175574.1|2078710_2079724_-|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRVHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>NZ_LR793264.1|WP_002910105.1|2077610_2078513_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>NZ_LR793264.1|WP_002910103.1|2077081_2077489_+|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>NZ_LR793264.1|WP_004145401.1|2076527_2076659_+|hypothetical-protein
MTPIKVFYRGDDCTIFYAHSRAFSRGIVAKLKGLQTERIKKMN
>NZ_LR793264.1|WP_032414273.1|2075902_2076520_-|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFEDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCRKHYKEALSVGSLTKVQNQHRPC
>NZ_LR793264.1|WP_002910097.1|2073079_2075755_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>NZ_LR793264.1|WP_032103886.1|2072816_2073002_-|hypothetical-protein
MHVNVYVEKSGRCFTDLLKKLYLFRFQVLLPSTLLVSSRLLTSEYKLRDLDQVLSLLIPFS
>NZ_LR793264.1|WP_004152249.1|2083598_2084042_-|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>NZ_LR793264.1|WP_016947537.1|2084149_2085046_+|DMT-family-transporter
MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVKWGWLLLAFGGVVILLSSELMPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAAGNNLDWGEKKPRRGGVSEQSRDS
>NZ_LR793264.1|WP_002910189.1|2085042_2085720_-|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>NZ_LR793264.1|WP_002910191.1|2085719_2086430_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>NZ_LR793264.1|WP_002910193.1|2086426_2087962_-|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>NZ_LR793264.1|WP_023286597.1|2087958_2091702_-|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWDIYKGIAKKFSEVCVGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQNEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>NZ_LR793264.1|WP_032414325.1|2091868_2091982_-|hypothetical-protein
MGLPVKWLYPLIPPLLTNPGETPPFEVKIIKKQQVKK
>NZ_LR793264.1|WP_004175568.1|2092107_2093496_-|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>NZ_LR793264.1|WP_023327915.1|2093807_2095586_+|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFTIQ
>NZ_LR793264.1|WP_002910198.1|2095596_2096247_+|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF

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Crispr_ID: NZ_LR793264_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR793264_2

4836919-4837045

Orphan

Consensus_repeat	Method
TCGCGGGTTGTGTAGCCCGGGTAAGGCGCGAATCGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR793264_2

>merge|NZ_LR793264|2|4836919-4837045|CRISPRCasFinder
TCGCGGGTTGTGTAGCCCGGGTAAGGCGCGAATCGCCGCCGCCGGGACATACCCCGGCTTGCGCTACGCTTAGCCGGGCTACCGAACATCGCGGGTTGTGTAGCCCGGGTAAGGCGCGAAGCGCCGC

>NZ_LR793264|2|2|4836919-4837045|CRISPRCasFinder
TCGCGGGTTGTGTAGCCCGGGTAAGGCGCGAATCGCCGC	CGCCGGGACATACCCCGGCTTGCGCTACGCTTAGCCGGGCTACCGAACA
TCGCGGGTTGTGTAGCCCGGGTAAGGCGCGAAGCGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR793264.1\|WP_002887503.1\|4834787_4835228_+\|homoprotocatechuate-degradation-operon-regulator-HpaR	unknown	unknown	gnl\|CDD\|188209
NZ_LR793264.1\|WP_108452637.1\|4843360_4844224_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_LR793264.1\|WP_009485350.1\|4838322_4838502_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR793264.1\|WP_004192151.1\|4839929_4840322_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NZ_LR793264.1\|WP_004151392.1\|4830395_4830776_-\|5-carboxymethyl-2-hydroxymuconate-Delta-isomerase	unknown	unknown	gnl\|CDD\|184991
NZ_LR793264.1\|WP_002887492.1\|4830785_4831643_-\|3,4-dihydroxyphenylacetate-2,3-dioxygenase	unknown	unknown	gnl\|CDD\|131351
NZ_LR793264.1\|WP_002887487.1\|4829483_4830287_-\|2-oxo-hepta-3-ene-1,7-dioic-acid-hydratase	unknown	unknown	gnl\|CDD\|131365
NZ_LR793264.1\|WP_048332995.1\|4837058_4838279_-\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_LR793264.1\|WP_004146079.1\|4840424_4841909_+\|sodium:solute-symporter-family-protein	unknown	unknown	gnl\|CDD\|271357
NZ_LR793264.1\|WP_021441147.1\|4842764_4843364_+\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	unknown	unknown	gnl\|CDD\|181670
NZ_LR793264.1\|WP_023342543.1\|4833107_4833872_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|185125
NZ_LR793264.1\|WP_023313921.1\|4841905_4842778_+\|2-dehydro-3-deoxygalactonokinase	unknown	unknown	gnl\|CDD\|377446
NZ_LR793264.1\|WP_032418074.1\|4844859_4845681_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR793264.1\|WP_002887553.1\|4838479_4839919_+\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
NZ_LR793264.1\|WP_108452635.1\|4828675_4829473_-\|4-hydroxy-2-oxoheptanedioate-aldolase	unknown	unknown	gnl\|CDD\|131364
NZ_LR793264.1\|WP_004151390.1\|4835553_4835802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR793264.1\|WP_002887560.1\|4844293_4844827_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LR793264.1\|WP_108452636.1\|4835838_4836855_+\|Ldh-family-oxidoreductase	unknown	unknown	gnl\|CDD\|376860
NZ_LR793264.1\|WP_012737355.1\|4831644_4833111_-\|5-carboxymethyl-2-hydroxymuconate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143412
NZ_LR793264.1\|WP_004146085.1\|4833868_4834501_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|185125

Protein	Function_ID	Function_description	E-value
NZ_LR793264.1\|WP_002887503.1\|4834787_4835228_+\|homoprotocatechuate-degradation-operon-regulator-HpaR	gnl\|CDD\|188209	TIGR02337, Homoprotocatechuate_degradative_operon_repressor., homoprotocatechuate degradation operon regulator, HpaR. This Helix-Turn-Helix transcriptional regulator is a member of the MarR family (pfam01047) and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.	4.17885e-59
NZ_LR793264.1\|WP_108452637.1\|4843360_4844224_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.86692e-72
NZ_LR793264.1\|WP_004192151.1\|4839929_4840322_+\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	2.4049e-30
NZ_LR793264.1\|WP_004151392.1\|4830395_4830776_-\|5-carboxymethyl-2-hydroxymuconate-Delta-isomerase	gnl\|CDD\|184991	PRK15031, PRK15031, 5-carboxymethyl-2-hydroxymuconate Delta-isomerase.	1.05419e-95
NZ_LR793264.1\|WP_002887492.1\|4830785_4831643_-\|3,4-dihydroxyphenylacetate-2,3-dioxygenase	gnl\|CDD\|131351	TIGR02298, putative_34-dihydroxyphenylacetate_23-dioxygenase, 3,4-dihydroxyphenylacetate 2,3-dioxygenase. This enzyme catalyzes the ring-opening step in the degradation of 4-hydroxyphenylacetate.	0
NZ_LR793264.1\|WP_002887487.1\|4829483_4830287_-\|2-oxo-hepta-3-ene-1,7-dioic-acid-hydratase	gnl\|CDD\|131365	TIGR02312, 2-keto-4-pentenoate_hydratase, 2-oxo-hepta-3-ene-1,7-dioic acid hydratase. This model represents the enzyme which hydrates the double bond of 2-oxo-hepta-3-ene-1,7-dioic acid to form 4-hydroxy-2-oxo-heptane-1,7-dioic acid in the catabolism of 4-hydroxyphenylacetic acid. The gene for this enzyme is generally found adjacent to other genes of this pathway in an apparent operon.	2.25294e-174
NZ_LR793264.1\|WP_048332995.1\|4837058_4838279_-\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	0
NZ_LR793264.1\|WP_004146079.1\|4840424_4841909_+\|sodium:solute-symporter-family-protein	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	1.5877e-87
NZ_LR793264.1\|WP_021441147.1\|4842764_4843364_+\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	gnl\|CDD\|181670	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed.	5.51437e-110
NZ_LR793264.1\|WP_023342543.1\|4833107_4833872_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|185125	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional.	1.15454e-143
NZ_LR793264.1\|WP_023313921.1\|4841905_4842778_+\|2-dehydro-3-deoxygalactonokinase	gnl\|CDD\|377446	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase. 2-keto-3-deoxy-galactonokinase EC:2.7.1.58 catalyzes the second step in D-galactonate degradation.	7.79723e-113
NZ_LR793264.1\|WP_032418074.1\|4844859_4845681_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.49989e-16
NZ_LR793264.1\|WP_002887553.1\|4838479_4839919_+\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	3.00951e-159
NZ_LR793264.1\|WP_108452635.1\|4828675_4829473_-\|4-hydroxy-2-oxoheptanedioate-aldolase	gnl\|CDD\|131364	TIGR02311, 24-dihydroxyhept-2-ene-17-dioic_acid_aldolase, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents the aldolase which performs the final step unique to the 4-hydroxyphenylacetic acid catabolism pathway in which 2,4-dihydroxyhept-2-ene-1,7-dioic acid is split into pyruvate and succinate-semialdehyde. The gene for enzyme is generally found adjacent to other genes for this pathway organized into an operon.	1.19464e-152
NZ_LR793264.1\|WP_002887560.1\|4844293_4844827_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.25491e-15
NZ_LR793264.1\|WP_108452636.1\|4835838_4836855_+\|Ldh-family-oxidoreductase	gnl\|CDD\|376860	pfam02615, Ldh_2, Malate/L-lactate dehydrogenase. This family consists of bacterial and archaeal Malate/L-lactate dehydrogenase. L-lactate dehydrogenase, EC:1.1.1.27, catalyzes the reaction (S)-lactate + NAD(+) <=> pyruvate + NADH. Malate dehydrogenase, EC:1.1.1.37 and EC:1.1.1.82, catalyzes the reactions: (S)-malate + NAD(+) <=> oxaloacetate + NADH, and (S)-malate + NADP(+) <=> oxaloacetate + NADPH respectively.	4.80584e-121
NZ_LR793264.1\|WP_012737355.1\|4831644_4833111_-\|5-carboxymethyl-2-hydroxymuconate-semialdehyde-dehydrogenase	gnl\|CDD\|143412	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.	0
NZ_LR793264.1\|WP_004146085.1\|4833868_4834501_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|185125	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional.	8.3687e-131

>NZ_LR793264.1|WP_108452636.1|4835838_4836855_+|Ldh-family-oxidoreductase
MESVTLSLPEAYDLALEVLSANGFSADHAAAIARNVTAGERDGCASHGLWRLLGIVDTLRKGKVSPDAEPQLHDQAPAIARADAGGAFSLLAYERALPLLLEKASHNGIAALAINRCVHFSALFADIEPLTEAGLVGLACTPSHAWVAPAGGTRPLFGTNPIAFGWPRQDKPPFIVDMATSAAARGEIQLHQRSGKALPEGWGIDSQGQPTTDAAEVLNGAMLTFGGHKGSALAAMVELLAGPLIGDMTSAESLAWDNGAGGLPYGGELILALDPQRFLGAQAPEQLARAETLFMGMQEQGARLPGERRFACRQQSERQGVIISRSLHDEICALRQGG
>NZ_LR793264.1|WP_004151390.1|4835553_4835802_+|hypothetical-protein
MLNDIRHVASGLVHRIRHRLQAARAAAEDQFLPVNHAAAVGGFKQHAVRGGAGNQPRAVHLPDGGDVVGDLLLGRAQLPAAG
>NZ_LR793264.1|WP_002887503.1|4834787_4835228_+|homoprotocatechuate-degradation-operon-regulator-HpaR
MHDSLTIALLQAREAAMAYFRPIVKRHNLTEQQWRIVRILAERPSMDFHDLAFRACILRPSLTGILTRMERDGLVLRLKPVNDQRKLYVSLTPAGTALYESAQAEVEETYRLLEAQFTTEKLQQLTSLLEEFIALGVPAGRGDEEE
>NZ_LR793264.1|WP_004146085.1|4833868_4834501_-|fumarylacetoacetate-hydrolase-family-protein
MKGTIFAVALNHRSQLDAWREAFQQAPYKTPPKTAVWFIKPRNTVIGDGEAIPYPQGETVQSGATVALIVGKTARKVAAEEAANYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGTLSAVRNVDDLTIITEINGREADSWHTGDLQRNAAQLLSALSEFATLNPGDAILIGTPHSRVTLRPGDRVRILADGFPALENPVVAEGELA
>NZ_LR793264.1|WP_023342543.1|4833107_4833872_-|fumarylacetoacetate-hydrolase-family-protein
MKQARIEWQGQVRDVLVNERDQVRLDDGTVLKEGEFRWLPPANGTLFALGLNYADHASELEFKPPTEPLVFIKAPNTFTGHQRQSVRPDNVEYMHYEAELVVVIGKTARRVSEAEAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDTLTPIGPWIVSKEAIPDPHNLALRTWVNGELRQQGTTADLIFSIPFLIAYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVIVEVEGVGRLVNHIISQQAYEETLS
>NZ_LR793264.1|WP_012737355.1|4831644_4833111_-|5-carboxymethyl-2-hydroxymuconate-semialdehyde-dehydrogenase
MKKINHWINGKNVAGADYFHTTNPATGEVLAEVASGGEAEINQAVAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPTDPNTQIGALISQQHWEKVSGYIRLGIEEGATLLAGGADKPSDLPAHLKAGNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV
>NZ_LR793264.1|WP_002887492.1|4830785_4831643_-|3,4-dihydroxyphenylacetate-2,3-dioxygenase
MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEIGKRCREMGVDTIIVFDTHWLVNSAYHINCADHFQGVYTSNELPHFIRDMTYDYDGNPELGQLIADEAVKLGVRAKAHNIPSLKLEYGTLVPMRYMNSDKHFKVVSISAFCTVHDFADSRRLGEAILKAIEKYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDHQMDERVVKLWREGKFKEFCTMLPEYADYCYGEGNMHDTVMLLGLLGWDKYDGKVEFITELFASSGTGQVNAVFPLPAQA
>NZ_LR793264.1|WP_004151392.1|4830395_4830776_-|5-carboxymethyl-2-hydroxymuconate-Delta-isomerase
MPHFIAECTDNIREQADLPGLFAKVNEALAATGIFPIGGIRSRAHWLDTWQMADGRQDYAFVHMTLKIGAGRSLESRQDVGDMLFALIKSHFATLMESRYLALSFAMEELDPTLNYKQNNVHALFK
>NZ_LR793264.1|WP_002887487.1|4829483_4830287_-|2-oxo-hepta-3-ene-1,7-dioic-acid-hydratase
MLDKQTRTLIAQRLNQAEKQREQIRAISLDYPSITIEDAYAVQREWVEMKIAEGRVLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGAISCRFV
>NZ_LR793264.1|WP_108452635.1|4828675_4829473_-|4-hydroxy-2-oxoheptanedioate-aldolase
MNNAFKEALKAGRPQIGLWLGLCSSYSAEMLAGAGFDWLLIDGEHAPNNVPTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNAEEARLAVRATRYPPAGIRGVGSALARASRWNRVPDYIHQANDAMCVLVQIETREALKNLPQILDVDGVDGVFIGPADLSADMGHGGNPQHPEVQAAIEDAIQQIRQAGKAPGILMANEQLAKRYLELGALFVAVGVDTTLLARGAEALAARFTHNATTTTDNNKSVY
>NZ_LR793264.1|WP_048332995.1|4837058_4838279_-|amino-acid-deaminase
MKYHSAPLIPHKSALMSAPANLLAEEVCLPAALLKKSALENNISWMQRYADARGVSLAPHGKTTMTPWIFQAQQRAGAWGIGVGSAWQASAAMASGIQRVLMVNQLVGKANMQVVAQLKAHYRAVDFICCVDSEVNVRALSTFFADQGQTLDVLIELGVPGGRCGCRSVDDALALAQRVSDLPGLRLRGLELYEGVLHGDDPQPQVEALLQQAAALACRMEPLVDGEFILTGAGTVWYDVVCNIWLAAAKPRRCRIVIRPGCYITHDRGIYDLAQQELIARDPIACDLAGDLTSALELMAMVQSVPEADRAVVNFGKRDCAFDAGLPQPIAHYRNGQELALRAESIVSTGIMDQHCMLRLAPGSDVQVGDILLFGTSHPCLTFDKWKTLLLVDDDYNVLDELDTLF
>NZ_LR793264.1|WP_009485350.1|4838322_4838502_-|hypothetical-protein
MKSQSTFIAITPFRHADKLTIYKRKKQWKTTQNSDRFVILLFKTNNIFILKIYLSNSYK
>NZ_LR793264.1|WP_002887553.1|4838479_4839919_+|D-aminoacylase
MKVDWLFKNVTVIDGSGGPQYRADVAVKGDRIMAIAPALDVAAEQVIDGQGRVLAPGFIDVHTHDDINVIRMPEYLPKLSQGVTTVIVGNCGISAATATMRGEVPDPMNLLGEQQHFIYPTVEAYAHAVEAARPSLNVGTLIGHTALRNNHMDDLFRPANETEIAGMRVQLRDALRQGALGLSTGLAYASAFQSTTEEVMALAEELAAGKGVYTTHLRSEFEPILEALDEAFRIGRHGNVPVVVSHHKCAGAKNWGRTKETLAFFDEMRQQQDIACDCYPYSASSSTLDMKQVTDEFDIVITWSEAQPEQAGKTLQQIADEWQVSLHDAAARLMPAGAIYHNMDEQDVRRVMRYPVTMIGSDGLPNDPMPHPRLWGAFPRVLGHYSRDEQLFPLTTAVHKMTGLSAARFQLADRGLVKIGYFADLVLFDPQTVRDVASFSDPKRPADGIEAVMVNGVMSYGSDKKITGRAGRFLRRRMD
>NZ_LR793264.1|WP_004192151.1|4839929_4840322_+|RidA-family-protein
MSIKRYGVEGGTGTGGQHLPFARAVEAGGWLYVSGQTPMKNGEVVEGGIVDQSRLAIQNCVDIMTEAGYTLADVVHVKVILTDARYFQSFNKVFREFFGDNPPARICCVADLVVDCKVEVDVTCFNASRA
>NZ_LR793264.1|WP_004146079.1|4840424_4841909_+|sodium:solute-symporter-family-protein
MNSHVFLVGFIIYALAMIWLGWYVSRHQKSGEDFLLGGRSLPLFLTLGSTVATMVGTGSSMGAVGFGYSNGWAGMLYGVGGAIGILLVAWLFAPVRKLRFMTMSEELSYYTGGSHLIKNLVGIMIFIASIGWLGAHILGGSMYLAWATGINLTVAKIIIAMAFAIYVIIGGYSAVVWTDTIQALILFFGFILMAILAVVHVGGWDAIVQAMDPKAMSLFAVDKLGTIPALSLAMVIGVGVLATPSYRQRIYSGKDVSSVRRSFVYTGVLYLFFSVLPAVIGMAAWTMNPNLENSNYAFLFATSFLPAILGLVVLIAGLSATMSSASSDAIAAVAIMMRDVYTLVTGKMPPAHKAITLSRWMLAFVIGLAMIFALTSNDIISYITKMISMLMSGLFVCSILGRFWLRFNWQGALTALLSGMLVSIVVLVKADWLAYWGNPCIPSVVGSFVSAIFVTVMTPASKISRQQALEMITQEREGEAIPAKTVVQVSGETQ
>NZ_LR793264.1|WP_023313921.1|4841905_4842778_+|2-dehydro-3-deoxygalactonokinase
MKDYIAVDWGSTQLRGWLIRNGQCVETKQLPMGITRLNGRSPADVFAEHLAPWRGAQALPVLMAGMIGSDAGWQAVPYLDCPTAIDAPGRQLCAVAEGVWIIPGLKIEQDGDFNVMRGEETQLLGACQLAPAECYVLPGTHCKWVQVVGGGVRHFATAMTGELHHLLMTQSLIGKGLPAQQPDDAAFERGLEKGLAQPSLISELFVARAARVLGGLAASSVSDYLSGLLIGAEVATLGQRFRTSAVTLVGEPALNARYGRAMKARGMMVNSCSGDEALLAGMARIMHEQD
>NZ_LR793264.1|WP_021441147.1|4842764_4843364_+|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase
MNKIKLVAILRGIQPAEAADHIETLINAGFRYIEIPLNSPDWQQSIPAMVRQFGERAMIGAGTVLKVEQVDFLAEAGAKLIVTPNTAPAVIRRAVDKGMLVCAGCATASEAFSALDAGAQWLKIFPSSAFGADYIRALKAVLPPEVPVLAVGGVTPENLATWIQAGCAGAGLGSDLYRAGQAVERTREQAERFISASKS
>NZ_LR793264.1|WP_108452637.1|4843360_4844224_-|MurR/RpiR-family-transcriptional-regulator
MSWSIDIISCITDRFVELTATEKRIAQFILDDVAAAAELPIAEIARLTQTSQASVTRFARALGCKDVRELKMKLAQSLAVGQRFILDVPDLEGVQGIYESIISVLETNRRALDIEALKRAVSWLSDARQILALGMGGGSTICAQEIQYRLFRLGLPVVSQSDGLLVRMMSSAVTPQDVVIVLSLGGYTREIIESAAIASQYGAKVIAITPAGTPLAEQAGLVLPLLVRENDYIFKPSTSRYAMLAMVDVLATELAMANKTQAKGKLRRIKLALDSHRGGVDRQPLGD
>NZ_LR793264.1|WP_002887560.1|4844293_4844827_-|GNAT-family-N-acetyltransferase
MKTNTITAGAVLRLTQESDIALLPAIERSAAQAFRQIPSLAWLADSEVISVARHHDYLETEHSLLAVAAGQPVGFILTEPLDDALFIVEVAVHQAWQQQGIGRMLLERVIESARQMGYPAVTLTTFREVPWNAPFYTRLGFAMLDELTLPAGLAAKREQETRHGLPPESRCAMRLAL
>NZ_LR793264.1|WP_032418074.1|4844859_4845681_+|GNAT-family-N-acetyltransferase
MELTAVPATQFSSVQLTDILNACFEAYLVPVTQSVEGFVQRFSAEGMSLVDSRVWLAGDEPAAIAIVARRGNAARLAAFALRPAWRGKGLGRKLMQELLMLLQQQGIETVFLEVIRDNHAAVALYQSLGFTRRYGLCGYLSTELLPPVPGVLQLYPTLSLLRRAIEESNSQLPWLLDPLTFATLPCQVVTLEQRAFAVLTTAGSRPVLSFLWVEPAARRQGLARELLMALAQQFPGIGTSVTVPETFTPLFAAAGYTPLSLQQYEMTMDLADA

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Crispr_ID: NZ_LR793264_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR793264_3

4962208-4962293

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR793264_3

>merge|NZ_LR793264|3|4962208-4962293|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_LR793264|3|3|4962208-4962293|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR793264.1\|WP_016531719.1\|4970847_4971543_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_LR793264.1\|WP_002888323.1\|4952766_4953144_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_LR793264.1\|WP_002888345.1\|4962390_4963755_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_LR793264.1\|WP_002888329.1\|4954959_4956246_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_LR793264.1\|WP_012737392.1\|4973193_4974903_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_LR793264.1\|WP_108452645.1\|4965220_4968127_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_LR793264.1\|WP_004145972.1\|4975240_4976086_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_LR793264.1\|WP_002888340.1\|4960440_4962066_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_LR793264.1\|WP_002888324.1\|4953146_4953968_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_LR793264.1\|WP_002888332.1\|4958892_4959720_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_LR793264.1\|WP_004145980.1\|4964548_4965208_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_LR793264.1\|WP_004177424.1\|4971680_4973183_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_LR793264.1\|WP_002888327.1\|4953964_4954954_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_LR793264.1\|WP_002888373.1\|4976214_4976982_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_LR793264.1\|WP_002888337.1\|4959752_4960451_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_LR793264.1\|WP_002888320.1\|4951182_4951662_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_LR793264.1\|WP_004178576.1\|4968314_4970672_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_LR793264.1\|WP_002888321.1\|4951913_4952762_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	unknown	unknown	gnl\|CDD\|273208
NZ_LR793264.1\|WP_002888347.1\|4963934_4964474_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_LR793264.1\|WP_004147026.1\|4956300_4958649_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158

Protein	Function_ID	Function_description	E-value
NZ_LR793264.1\|WP_016531719.1\|4970847_4971543_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_LR793264.1\|WP_002888323.1\|4952766_4953144_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_LR793264.1\|WP_002888345.1\|4962390_4963755_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_LR793264.1\|WP_002888329.1\|4954959_4956246_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_LR793264.1\|WP_012737392.1\|4973193_4974903_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_LR793264.1\|WP_108452645.1\|4965220_4968127_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_LR793264.1\|WP_004145972.1\|4975240_4976086_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_LR793264.1\|WP_002888340.1\|4960440_4962066_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_LR793264.1\|WP_002888324.1\|4953146_4953968_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_LR793264.1\|WP_002888332.1\|4958892_4959720_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_LR793264.1\|WP_004145980.1\|4964548_4965208_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.90078e-161
NZ_LR793264.1\|WP_004177424.1\|4971680_4973183_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_LR793264.1\|WP_002888327.1\|4953964_4954954_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_LR793264.1\|WP_002888373.1\|4976214_4976982_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_LR793264.1\|WP_002888337.1\|4959752_4960451_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_LR793264.1\|WP_002888320.1\|4951182_4951662_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_LR793264.1\|WP_004178576.1\|4968314_4970672_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_LR793264.1\|WP_002888321.1\|4951913_4952762_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_LR793264.1\|WP_002888347.1\|4963934_4964474_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_LR793264.1\|WP_004147026.1\|4956300_4958649_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0

>NZ_LR793264.1|WP_002888340.1|4960440_4962066_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_LR793264.1|WP_002888337.1|4959752_4960451_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_LR793264.1|WP_002888332.1|4958892_4959720_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_LR793264.1|WP_004147026.1|4956300_4958649_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_LR793264.1|WP_002888329.1|4954959_4956246_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_LR793264.1|WP_002888327.1|4953964_4954954_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_LR793264.1|WP_002888324.1|4953146_4953968_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_LR793264.1|WP_002888323.1|4952766_4953144_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_LR793264.1|WP_002888321.1|4951913_4952762_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_LR793264.1|WP_002888320.1|4951182_4951662_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_LR793264.1|WP_002888345.1|4962390_4963755_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_LR793264.1|WP_002888347.1|4963934_4964474_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_LR793264.1|WP_004145980.1|4964548_4965208_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_LR793264.1|WP_108452645.1|4965220_4968127_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGVLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_LR793264.1|WP_004178576.1|4968314_4970672_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_LR793264.1|WP_016531719.1|4970847_4971543_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQRIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_LR793264.1|WP_004177424.1|4971680_4973183_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_LR793264.1|WP_012737392.1|4973193_4974903_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLPQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_LR793264.1|WP_004145972.1|4975240_4976086_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_LR793264.1|WP_002888373.1|4976214_4976982_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

774009 : 783473

Dickeya_phage(16.67%)

protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|774009_775125_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|775121_777062_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|777138_777360_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|777685_778003_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|778033_780313_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|780433_780652_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|781005_781707_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004209699.1\|781751_783473_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_2

1139264 : 1203202

Salmonella_phage(16.28%)

transposase,protease,holin,terminase,integrase

attL 1154269:1154285|attR 1176722:1176738

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174890671.1\|1139264_1140411_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.9e-147	92.6
WP_002901746.1\|1140625_1141528_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_002901749.1\|1141588_1142179_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_004196459.1\|1142175_1142937_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.2e-08	23.2
WP_004210741.1\|1142931_1143147_+	hypothetical protein	NA	NA	NA	NA
WP_108452657.1\|1143191_1144238_+\|protease	protease SohB	NA	NA	NA	NA
WP_002901761.1\|1144285_1144537_-	YciN family protein	NA	NA	NA	NA
WP_002901763.1\|1144943_1147541_+	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	2.9e-89	35.6
WP_002901772.1\|1147886_1148861_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_002901776.1\|1149106_1149274_+	YmiA family putative membrane protein	NA	NA	NA	NA
WP_108452658.1\|1149662_1152335_+	aconitate hydratase AcnA	NA	NA	NA	NA
WP_002901778.1\|1152381_1152984_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-43	49.5
WP_002901779.1\|1153147_1153915_+	phosphatidylglycerophosphatase B	NA	NA	NA	NA
WP_002901780.1\|1154050_1154359_+	LapA family protein	NA	NA	NA	NA
1154269:1154285	attL	NA	NA	NA	NA
WP_002901781.1\|1154365_1155535_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_004151907.1\|1155726_1156464_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_002901782.1\|1156463_1156790_+	stress response translation initiation inhibitor YciH	NA	NA	NA	NA
WP_002901783.1\|1156921_1157140_-	osmotically-inducible lipoprotein OsmB	NA	NA	NA	NA
WP_002901785.1\|1157415_1158165_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_002901786.1\|1158236_1158416_-	hypothetical protein	NA	NA	NA	NA
WP_002901787.1\|1158574_1160509_-	exoribonuclease II	A0A2H4UVB7	Bodo_saltans_virus	7.0e-08	24.6
WP_020802459.1\|1160590_1161748_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_174890672.1\|1161938_1162727_-	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_108452665.1\|1162925_1163468_-	HutD family protein	NA	NA	NA	NA
WP_004151902.1\|1163715_1165095_+	cytosine permease	NA	NA	NA	NA
WP_004140269.1\|1165139_1165949_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
WP_004140266.1\|1165950_1166943_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004151901.1\|1166942_1167833_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_080925579.1\|1167979_1169197_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	5.6e-120	51.6
WP_080925578.1\|1169417_1169657_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	7.5e-21	66.2
WP_080925577.1\|1169697_1170807_-	recombinase RecT	H6WRX0	Salmonella_phage	2.1e-182	85.6
WP_080925576.1\|1170819_1173918_-	PD-(D/E)XK nuclease-like domain-containing protein	H6WRX1	Salmonella_phage	1.6e-293	57.4
WP_016946289.1\|1174055_1174211_-	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	2.6e-14	74.5
WP_004179600.1\|1174219_1174411_-	YebW family protein	NA	NA	NA	NA
WP_108452660.1\|1174803_1175217_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023341332.1\|1175328_1175559_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	2.1e-12	45.3
WP_108452661.1\|1175561_1176098_+	hypothetical protein	M9NZI6	Enterobacteria_phage	4.1e-59	67.8
WP_108452662.1\|1176446_1177367_+	replication protein	K7PGZ0	Enterobacteria_phage	2.4e-91	60.0
1176722:1176738	attR	NA	NA	NA	NA
WP_108452663.1\|1177363_1178107_+	Replication protein P	A0A0M3ULE2	Salmonella_phage	1.7e-63	54.4
WP_016946299.1\|1178099_1178435_+	DUF977 family protein	H6WRX9	Salmonella_phage	4.4e-11	43.0
WP_069334955.1\|1178427_1179213_+	hypothetical protein	C7BGF1	Burkholderia_phage	3.3e-65	52.9
WP_049124977.1\|1179209_1179413_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	6.6e-26	83.3
WP_020804604.1\|1179405_1179660_+	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
WP_108452162.1\|1179656_1179878_+	hypothetical protein	A9YWV3	Burkholderia_phage	1.4e-10	48.1
WP_142407224.1\|1180670_1181045_-	hypothetical protein	NA	NA	NA	NA
WP_108452424.1\|1181090_1182176_-	ATP-binding protein	NA	NA	NA	NA
WP_004184503.1\|1183159_1183393_+	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_087812871.1\|1183803_1184403_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	79.4
WP_032414240.1\|1184611_1184908_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	6.0e-36	71.9
WP_108452423.1\|1184904_1185273_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	5.9e-41	63.8
WP_108452422.1\|1185269_1186052_+	antitermination protein	F1C595	Cronobacter_phage	8.5e-114	79.1
WP_031280381.1\|1186368_1186815_-	hypothetical protein	NA	NA	NA	NA
WP_024176410.1\|1187455_1187755_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	4.5e-39	83.8
WP_023286288.1\|1187751_1188291_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
WP_004190674.1\|1188287_1188632_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_004190672.1\|1188628_1188904_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
WP_101856931.1\|1189992_1190997_+\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	2.0e-38	45.5
WP_004190663.1\|1190974_1192282_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
WP_008807834.1\|1192281_1193682_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	9.2e-127	53.3
WP_080882808.1\|1193665_1194778_+	hypothetical protein	I6PD76	Cronobacter_phage	1.5e-111	55.3
WP_004227000.1\|1195018_1195195_+	hypothetical protein	NA	NA	NA	NA
WP_016946679.1\|1195308_1196094_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
WP_004190653.1\|1196104_1197058_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
WP_151391665.1\|1197066_1197339_+	Ig-like domain-containing protein	NA	NA	NA	NA
WP_040225382.1\|1197379_1197775_+	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	4.7e-12	42.5
WP_004190649.1\|1197776_1198031_+	hypothetical protein	J9Q7U0	Salmonella_phage	8.0e-21	52.4
WP_004184451.1\|1198040_1198274_+	hypothetical protein	A0A1V0E8A3	Vibrio_phage	1.3e-09	49.2
WP_064155819.1\|1198260_1198644_+	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
WP_080882810.1\|1198645_1199197_+	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-28	39.9
WP_004190640.1\|1199193_1199586_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_023325166.1\|1199609_1200782_+	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	3.2e-24	27.3
WP_023325167.1\|1200835_1201318_+	hypothetical protein	NA	NA	NA	NA
WP_022631473.1\|1201455_1201653_+	hypothetical protein	NA	NA	NA	NA
WP_174890805.1\|1201741_1202053_+	DUF2545 family protein	NA	NA	NA	NA
WP_174890647.1\|1202054_1203202_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0

DBSCAN-SWA_3

1474770 : 1485657

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|1474770_1475391_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_009485280.1\|1475383_1476649_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	4.3e-232	98.8
WP_002903955.1\|1476660_1477563_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_002210513.1\|1477823_1478585_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|1478605_1479466_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_004176262.1\|1479763_1480024_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620097.1\|1480110_1481199_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176258.1\|1481229_1482495_-	MFS transporter	NA	NA	NA	NA
WP_032423486.1\|1482549_1485657_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_4

2137567 : 2190087

Enterobacteria_phage(25.45%)

holin,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108452300.1\|2137567_2137816_-	hypothetical protein	K7PGV5	Enterobacterial_phage	3.1e-09	53.2
WP_174890705.1\|2137949_2138219_-	hypothetical protein	NA	NA	NA	NA
WP_174890646.1\|2138229_2140506_-	hypothetical protein	A0A0K2FI18	Enterobacter_phage	1.2e-06	54.4
WP_174890706.1\|2140630_2143108_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	1.2e-198	45.6
WP_071057221.1\|2143094_2143490_-	C40 family peptidase	F1C5F2	Cronobacter_phage	1.2e-36	55.6
WP_174890707.1\|2143486_2143957_-	hypothetical protein	R9TPR6	Aeromonas_phage	1.2e-25	39.1
WP_063417024.1\|2143956_2144433_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	2.3e-37	49.0
WP_029884074.1\|2144478_2144721_-	hypothetical protein	NA	NA	NA	NA
WP_174890708.1\|2144720_2148089_-	tape measure protein	Q5G8W8	Enterobacteria_phage	0.0e+00	75.3
WP_032428681.1\|2148148_2148562_-	hypothetical protein	NA	NA	NA	NA
WP_124043122.1\|2148613_2148955_-	hypothetical protein	NA	NA	NA	NA
WP_077258341.1\|2149206_2149566_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	1.1e-15	40.9
WP_061353713.1\|2149609_2150062_-	hypothetical protein	NA	NA	NA	NA
WP_016528886.1\|2150058_2150631_-	SocA family protein	NA	NA	NA	NA
WP_174890709.1\|2150941_2151631_-	hypothetical protein	G0ZNE7	Cronobacter_phage	5.1e-62	53.2
WP_174890710.1\|2151698_2152463_-	immunoglobulin domain-containing protein	G0ZNE6	Cronobacter_phage	1.2e-40	44.2
WP_043906747.1\|2152522_2152744_-	hypothetical protein	NA	NA	NA	NA
WP_174890711.1\|2152746_2153130_-	hypothetical protein	NA	NA	NA	NA
WP_174890712.1\|2153126_2153495_-	HK97 gp10 family phage protein	F1C5E3	Cronobacter_phage	8.5e-48	82.0
WP_085353132.1\|2153497_2153860_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	1.6e-19	49.2
WP_174890713.1\|2153859_2154033_-	50S ribosomal protein L13	I6R0P9	Salmonella_phage	4.1e-13	56.1
WP_174890714.1\|2154032_2154434_-	hypothetical protein	A0A1V0E5R0	Salmonella_phage	1.8e-51	74.6
WP_004223289.1\|2154500_2154794_-	hypothetical protein	A0A1V0E5P8	Salmonella_phage	3.6e-41	87.6
WP_174890715.1\|2154803_2155880_-	hypothetical protein	A0A1V0E5P6	Salmonella_phage	1.4e-183	86.9
WP_032438677.1\|2155897_2156347_-	hypothetical protein	I6S1Q2	Salmonella_phage	7.1e-65	85.2
WP_108452609.1\|2156359_2157625_-	hypothetical protein	Q5G8Y2	Enterobacteria_phage	5.4e-219	90.5
WP_174890716.1\|2157627_2158554_-\|head	phage head morphogenesis protein	Q5G8Y3	Enterobacteria_phage	1.5e-162	91.9
WP_174890717.1\|2158513_2159863_-	DUF1073 domain-containing protein	Q5G8Y4	Enterobacteria_phage	1.0e-239	90.4
WP_032444936.1\|2159932_2160199_-	hypothetical protein	Q5G8Y6	Enterobacteria_phage	3.0e-34	77.3
WP_174890718.1\|2160260_2161745_-	DNA-packaging protein	G0ZND4	Cronobacter_phage	2.0e-257	86.8
WP_004223268.1\|2161731_2162211_-	DUF2280 domain-containing protein	F1C5D6	Cronobacter_phage	1.4e-63	74.8
WP_174890719.1\|2162241_2162877_-	hypothetical protein	I6S676	Salmonella_phage	1.8e-101	80.7
WP_020804475.1\|2163774_2164152_+	hypothetical protein	NA	NA	NA	NA
WP_174890720.1\|2164349_2164739_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	3.1e-24	50.0
WP_174890810.1\|2164735_2165233_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	3.1e-77	81.8
WP_012542609.1\|2165210_2165480_-\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-32	78.3
WP_174890721.1\|2166343_2167027_-	antiterminator	I6PDF8	Cronobacter_phage	3.9e-54	50.6
WP_032427735.1\|2167023_2167164_-	YlcG family protein	NA	NA	NA	NA
WP_174890722.1\|2167160_2167799_-	recombination protein NinG	H6WRY9	Salmonella_phage	1.4e-74	68.9
WP_174890723.1\|2167791_2167962_-	hypothetical protein	G8C7V4	Escherichia_phage	7.4e-15	71.4
WP_032748419.1\|2167961_2168417_-	hypothetical protein	K7P7B8	Enterobacteria_phage	3.7e-61	72.8
WP_059065411.1\|2168615_2168879_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	4.2e-25	72.4
WP_059065413.1\|2168875_2169058_-	hypothetical protein	NA	NA	NA	NA
WP_174890724.1\|2169134_2169920_-	hypothetical protein	NA	NA	NA	NA
WP_049117363.1\|2170904_2171099_-	hypothetical protein	NA	NA	NA	NA
WP_174890725.1\|2171099_2171651_-	ead/Ea22-like family protein	A0A2H4FRZ0	Salmonella_phage	2.0e-37	57.6
WP_154974831.1\|2171647_2171857_-	hypothetical protein	I7B2L9	Escherichia_phage	5.0e-05	45.3
WP_174890726.1\|2171928_2172321_-	hypothetical protein	K7P801	Enterobacteria_phage	7.5e-10	36.6
WP_004218528.1\|2172317_2172620_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_174890727.1\|2172616_2173354_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	4.0e-65	55.7
WP_023342713.1\|2173350_2174379_-	replication protein	K7PGZ0	Enterobacteria_phage	1.9e-65	79.3
WP_174890728.1\|2174375_2175173_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	3.5e-91	72.8
WP_001548453.1\|2175258_2175480_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004178811.1\|2175520_2175754_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_024622727.1\|2175858_2176548_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
WP_174890729.1\|2176835_2177762_+	hypothetical protein	A4KWU2	Enterobacteria_phage	7.3e-96	59.2
WP_174890730.1\|2177796_2178000_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	5.9e-19	70.1
WP_174890731.1\|2178309_2178435_+	hypothetical protein	NA	NA	NA	NA
WP_008807814.1\|2178427_2178634_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_174890732.1\|2178713_2179685_+	hypothetical protein	M9P0E1	Enterobacteria_phage	2.0e-64	89.0
WP_040220025.1\|2179692_2179977_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.2e-28	61.7
WP_159178462.1\|2179986_2180901_+	recombinase RecT	G8C7T0	Escherichia_phage	4.3e-157	90.8
WP_048281026.1\|2180897_2181380_+	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	8.2e-75	93.1
WP_174890733.1\|2181414_2181720_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_042935507.1\|2181716_2182244_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	8.4e-57	61.0
WP_004146321.1\|2182240_2182459_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	2.1e-09	47.2
WP_080844970.1\|2182460_2182676_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.7e-09	51.9
WP_174890734.1\|2182679_2182922_+	excisionase family protein	A0A286S2A4	Klebsiella_phage	1.3e-28	80.0
WP_124073900.1\|2182969_2184232_+	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	3.9e-233	94.8
WP_156234753.1\|2184216_2184498_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_174890735.1\|2184472_2185282_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004175494.1\|2185293_2186589_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
WP_002910715.1\|2186892_2187819_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910717.1\|2187917_2188394_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004180410.1\|2188443_2190087_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4

DBSCAN-SWA_5

2404205 : 2421042

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108452427.1\|2404205_2405537_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.9e-15	29.1
WP_015958691.1\|2405526_2406360_-	ABC transporter permease	NA	NA	NA	NA
WP_108452426.1\|2406388_2407219_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_108452425.1\|2407305_2407860_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.5e-51	57.1
WP_108452437.1\|2407874_2408765_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-28	34.2
WP_004175258.1\|2408796_2409666_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_108452176.1\|2409692_2410757_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-104	54.4
WP_021313308.1\|2411596_2412601_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5
WP_174890679.1\|2412861_2413830_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.7e-181	96.6
WP_016947628.1\|2414067_2414187_+	small membrane protein	NA	NA	NA	NA
WP_000704907.1\|2414615_2415782_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
WP_101989088.1\|2415961_2416516_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	8.6e-52	58.2
WP_108452437.1\|2416530_2417421_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-28	34.2
WP_108452176.1\|2418347_2419412_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-104	54.4
WP_065810909.1\|2419635_2421042_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.3e-40	29.4

DBSCAN-SWA_6

2464326 : 2471231

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087637802.1\|2464326_2465805_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.1e-29	28.3
WP_004175198.1\|2465801_2466524_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|2466842_2468204_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004151134.1\|2468446_2469343_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004180550.1\|2469583_2470357_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004180551.1\|2470367_2471231_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_7

2816913 : 2828028

Salmonella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174890760.1\|2816913_2819712_-	tape measure protein	A0A1B1W284	Salmonella_phage	1.6e-45	32.7
WP_004140789.1\|2819719_2820046_-	hypothetical protein	NA	NA	NA	NA
WP_064172567.1\|2820340_2820718_-	hypothetical protein	A0A0M4QWT0	Salmonella_phage	8.2e-22	45.5
WP_074193881.1\|2820747_2821068_-	superinfection immunity protein	A0A0S2SY85	Pseudomonas_phage	4.7e-18	45.0
WP_099973296.1\|2821137_2821410_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_029602627.1\|2821423_2821870_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_117066039.1\|2822208_2824971_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	9.2e-296	56.9
WP_117038315.1\|2824985_2825612_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.5e-23	37.8
WP_004866294.1\|2825608_2825821_-	hypothetical protein	NA	NA	NA	NA
WP_029497050.1\|2825817_2826078_-	hypothetical protein	NA	NA	NA	NA
WP_048280610.1\|2827046_2827226_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_004177036.1\|2827218_2828028_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	3.5e-30	56.8

DBSCAN-SWA_8

4695146 : 4754802

Enterobacteria_phage(35.29%)

integrase,tRNA,transposase

attL 4710181:4710206|attR 4763855:4763880

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108452416.1\|4695146_4695911_+\|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	NA	NA	NA	NA
WP_004152275.1\|4696181_4696685_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009486532.1\|4696805_4699661_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	6.0e-141	36.5
WP_002886953.1\|4699660_4700104_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_002886954.1\|4700223_4701735_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	9.2e-48	38.4
WP_002886955.1\|4702124_4703222_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_002886956.1\|4703221_4704304_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_064156404.1\|4704352_4705855_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	1.6e-84	45.1
WP_004178392.1\|4705953_4706775_-	TIM barrel protein	NA	NA	NA	NA
WP_009486529.1\|4707126_4708632_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_004177654.1\|4708650_4709460_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA
WP_174890796.1\|4710128_4710290_+	hypothetical protein	NA	NA	NA	NA
4710181:4710206	attL	NA	NA	NA	NA
WP_004152190.1\|4710823_4711681_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_031590889.1\|4711832_4713746_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA
WP_004152191.1\|4714251_4716192_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA
WP_004215323.1\|4716238_4717252_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_004152193.1\|4717293_4718178_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_004192343.1\|4718201_4719101_+	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_087785722.1\|4719244_4720555_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_023317451.1\|4720547_4721621_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-22	32.7
WP_108452564.1\|4721626_4722451_-	phosphodiesterase	NA	NA	NA	NA
WP_019705529.1\|4722461_4723349_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_023159708.1\|4723338_4724223_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_004177639.1\|4724353_4725373_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	1.1e-44	31.7
WP_108452563.1\|4725484_4726954_-	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_040183302.1\|4726950_4727631_-	carbonic anhydrase	NA	NA	NA	NA
WP_044784988.1\|4728468_4729722_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	9.6e-75	41.0
WP_044784989.1\|4729797_4732272_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_064152725.1\|4732616_4733183_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.1e-59	64.9
WP_004132551.1\|4733200_4733446_-	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	5.0e-20	59.3
WP_064152724.1\|4733442_4734180_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.9e-71	60.1
WP_044784923.1\|4734740_4735007_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	5.8e-30	70.5
WP_077265860.1\|4735003_4735555_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	3.4e-32	68.4
WP_004098168.1\|4735551_4735779_+	hypothetical protein	NA	NA	NA	NA
WP_004098169.1\|4735775_4736096_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_174890797.1\|4736109_4738443_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	84.2
WP_032421977.1\|4738831_4739527_+	hypothetical protein	NA	NA	NA	NA
WP_089503791.1\|4739914_4741025_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	4.4e-07	30.4
WP_108452672.1\|4741308_4742796_-	hypothetical protein	NA	NA	NA	NA
WP_032170364.1\|4743737_4744004_-	hypothetical protein	NA	NA	NA	NA
WP_108452671.1\|4743966_4745223_-	conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_108452670.1\|4745384_4745648_-	hypothetical protein	NA	NA	NA	NA
WP_108452669.1\|4745637_4746765_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_174890647.1\|4746975_4748122_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0
WP_108452668.1\|4748650_4749761_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	3.8e-06	29.7
WP_174890679.1\|4750174_4751143_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.7e-181	96.6
WP_004192264.1\|4751382_4751862_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_032425515.1\|4751864_4752212_-	hypothetical protein	NA	NA	NA	NA
WP_108452667.1\|4752213_4752888_-	hypothetical protein	NA	NA	NA	NA
WP_071587209.1\|4753338_4753716_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_174890679.1\|4753833_4754802_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.7e-181	96.6
4763855:4763880	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR793264

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection